Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
SMPDL3B	27293	broad.mit.edu	36	1	28153489	28153489	+	Silent	SNP	G	G	T	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
GNL2	29889	broad.mit.edu	36	1	37812874	37812874	+	Silent	SNP	G	G	A	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
ITGA10	8515	broad.mit.edu	36	1	144245273	144245273	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
FAM63A	55793	broad.mit.edu	36	1	149237234	149237234	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
APCS	325	broad.mit.edu	36	1	157824849	157824849	+	Silent	SNP	G	G	A	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
ARHGAP21	57584	broad.mit.edu	36	10	24924689	24924689	+	Silent	SNP	G	G	C	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
CCDC6	8030	broad.mit.edu	36	10	61244452	61244452	+	Missense_Mutation	SNP	A	A	G	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	A	A	G	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA;Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
CDC2	0	broad.mit.edu	36	10	62215450	62215450	+	Missense_Mutation	SNP	G	G	C	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	454_PCR_WGA;Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
SUPV3L1	6832	broad.mit.edu	36	10	70621417	70621417	+	Missense_Mutation	SNP	G	G	T	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
PRF1	5551	broad.mit.edu	36	10	72027815	72027815	+	Nonstop_Mutation	SNP	T	T	A	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	T	T	A	A	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
SYNPO2L	79933	broad.mit.edu	36	10	75077114	75077114	+	Missense_Mutation	SNP	G	G	C	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
ZNF503	84858	broad.mit.edu	36	10	76828582	76828582	+	Silent	SNP	T	T	G	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	T	T	G	G	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
COX15	1355	broad.mit.edu	36	10	101477240	101477240	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
INSC	387755	broad.mit.edu	36	11	15090605	15090605	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
SDHAF2	54949	broad.mit.edu	36	11	60961684	60961684	+	Silent	SNP	G	G	T	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
KIRREL3	84623	broad.mit.edu	36	11	125821979	125821979	+	Missense_Mutation	SNP	A	A	T	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	A	A	T	T	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
TAS2R50	259296	broad.mit.edu	36	12	11030693	11030693	+	Missense_Mutation	SNP	G	G	C	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
EEA1	8411	broad.mit.edu	36	12	91716817	91716817	+	Silent	SNP	T	T	C	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
CUX2	23316	broad.mit.edu	36	12	110260538	110260538	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
KNTC1	9735	broad.mit.edu	36	12	121623710	121623710	+	Silent	SNP	C	C	A	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
HECTD1	25831	broad.mit.edu	36	14	30653011	30653011	+	Missense_Mutation	SNP	G	G	C	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
EIF2S1	1965	broad.mit.edu	36	14	66901240	66901240	+	Missense_Mutation	SNP	G	G	T	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
CCDC88C	440193	broad.mit.edu	36	14	90825370	90825370	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
DISP2	85455	broad.mit.edu	36	15	38448827	38448827	+	Silent	SNP	C	C	A	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
VPS39	23339	broad.mit.edu	36	15	40267316	40267316	+	Missense_Mutation	SNP	T	T	C	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
DUOX1	53905	broad.mit.edu	36	15	43231933	43231933	+	Silent	SNP	C	C	G	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
NR2F2	7026	broad.mit.edu	36	15	94676663	94676663	+	Missense_Mutation	SNP	A	A	T	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	A	A	T	T	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
MSLNL	401827	broad.mit.edu	36	16	770434	770434	+	Missense_Mutation	SNP	G	G	T	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
PRSS21	10942	broad.mit.edu	36	16	2811384	2811384	+	Missense_Mutation	SNP	C	C	G	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
DNAH3	55567	broad.mit.edu	36	16	20906662	20906662	+	Missense_Mutation	SNP	T	T	C	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
SLC5A11	115584	broad.mit.edu	36	16	24809691	24809691	+	Missense_Mutation	SNP	G	G	T	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
CES3	23491	broad.mit.edu	36	16	65558184	65558184	+	Missense_Mutation	SNP	A	A	G	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	A	A	G	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture;Sequenom			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
TXNL4B	54957	broad.mit.edu	36	16	70678142	70678142	+	Missense_Mutation	SNP	C	C	A	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
ANKRD11	29123	broad.mit.edu	36	16	87875898	87875898	+	Missense_Mutation	SNP	G	G	C	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
TP53	7157	broad.mit.edu	36	17	7518284	7518284	+	Missense_Mutation	SNP	G	G	A	rs28934573	unknown	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
NF1	4763	broad.mit.edu	36	17	26514375	26514375	+	Nonsense_Mutation	SNP	C	C	T	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture;Sequenom			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
CIC	23152	broad.mit.edu	36	19	47482805	47482805	+	Missense_Mutation	SNP	G	G	C	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
SIGLEC11	114132	broad.mit.edu	36	19	55155842	55155842	+	Missense_Mutation	SNP	G	G	C	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
PEG3	5178	broad.mit.edu	36	19	62024923	62024923	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
NPHP1	4867	broad.mit.edu	36	2	110279507	110279507	+	Missense_Mutation	SNP	A	A	C	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	A	A	C	C	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
CYTIP	9595	broad.mit.edu	36	2	157980773	157980773	+	Missense_Mutation	SNP	T	T	A	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	T	T	A	A	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
TANC1	85461	broad.mit.edu	36	2	159743390	159743390	+	Silent	SNP	G	G	A	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
FASTKD1	79675	broad.mit.edu	36	2	170102011	170102011	+	Silent	SNP	C	C	T	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
IRS1	3667	broad.mit.edu	36	2	227368238	227368238	+	Missense_Mutation	SNP	C	C	A	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
COL6A3	1293	broad.mit.edu	36	2	237952151	237952151	+	Missense_Mutation	SNP	C	C	A	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
CLIC6	54102	broad.mit.edu	36	21	35002123	35002123	+	Missense_Mutation	SNP	A	A	T	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	A	A	T	T	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture;Sequenom			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
DSCAM	1826	broad.mit.edu	36	21	40379537	40379537	+	Missense_Mutation	SNP	T	T	A	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	T	T	A	A	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
ITGB2	3689	broad.mit.edu	36	21	45143505	45143505	+	Missense_Mutation	SNP	C	C	G	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
ISX	91464	broad.mit.edu	36	22	33811585	33811585	+	Missense_Mutation	SNP	C	C	A	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
GGA1	26088	broad.mit.edu	36	22	36351895	36351895	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
ATXN10	25814	broad.mit.edu	36	22	44467611	44467611	+	Missense_Mutation	SNP	C	C	G	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
CELSR3	1951	broad.mit.edu	36	3	48672381	48672381	+	Silent	SNP	C	C	A	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
SLC38A3	10991	broad.mit.edu	36	3	50232512	50232512	+	Missense_Mutation	SNP	C	C	A	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
EPHA3	2042	broad.mit.edu	36	3	89539205	89539205	+	Missense_Mutation	SNP	T	T	A	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	T	T	A	A	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
KIAA2018	205717	broad.mit.edu	36	3	114862666	114862666	+	Missense_Mutation	SNP	G	G	C	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
LRRC31	79782	broad.mit.edu	36	3	171061159	171061159	+	Missense_Mutation	SNP	T	T	C	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
DLG1	1739	broad.mit.edu	36	3	198276997	198276997	+	Missense_Mutation	SNP	T	T	C	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
IQGAP2	10788	broad.mit.edu	36	5	75902200	75902200	+	Nonsense_Mutation	SNP	C	C	T	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
ADAM19	8728	broad.mit.edu	36	5	156865338	156865338	+	Missense_Mutation	SNP	G	G	T	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
TNXB	7148	broad.mit.edu	36	6	32155002	32155002	+	Silent	SNP	C	C	T	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
B3GAT2	135152	broad.mit.edu	36	6	71628310	71628310	+	Missense_Mutation	SNP	G	G	C	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
TRIL	9865	broad.mit.edu	36	7	28963656	28963656	+	Silent	SNP	A	A	G	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	A	A	G	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
SCRN1	9805	broad.mit.edu	36	7	29946841	29946841	+	Missense_Mutation	SNP	T	T	A	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	T	T	A	A	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
HERPUD2	64224	broad.mit.edu	36	7	35641357	35641357	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
MUC17	140453	broad.mit.edu	36	7	100469992	100469992	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
CUX1	1523	broad.mit.edu	36	7	101346125	101346125	+	Missense_Mutation	SNP	A	A	T	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	A	A	T	T	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
FLJ23834	222256	broad.mit.edu	36	7	105442888	105442888	+	Nonsense_Mutation	SNP	C	C	G	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
NRCAM	4897	broad.mit.edu	36	7	107612214	107612214	+	Missense_Mutation	SNP	T	T	C	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture;Sequenom			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
RP1	6101	broad.mit.edu	36	8	55704383	55704383	+	Silent	SNP	G	G	T	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
MYBL1	4603	broad.mit.edu	36	8	67639598	67639598	+	Missense_Mutation	SNP	T	T	C	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
FAM83A	84985	broad.mit.edu	36	8	124264603	124264603	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
FER1L6	654463	broad.mit.edu	36	8	125176440	125176440	+	Missense_Mutation	SNP	G	G	T	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
SECISBP2	79048	broad.mit.edu	36	9	91130309	91130309	+	Missense_Mutation	SNP	G	G	C	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
IKBKAP	8518	broad.mit.edu	36	9	110710486	110710486	+	Missense_Mutation	SNP	G	G	T	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
FKBP15	23307	broad.mit.edu	36	9	114989906	114989906	+	Silent	SNP	G	G	C	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
ARL13A	392509	broad.mit.edu	36	X	100129873	100129873	+	Missense_Mutation	SNP	G	G	C	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
F8	2157	broad.mit.edu	36	X	153810116	153810116	+	Nonsense_Mutation	SNP	G	G	A	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
SEC16B	89866	broad.mit.edu	36	1	176194718	176194728	+	Frame_Shift_Del	DEL	CTTATGTACAT	-	CTTATGTACAT	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	CTTATGTACAT	CTTATGTACAT	-	-	CTTATGTACAT	CTTATGTACAT	Unknown	Valid	Somatic	Phase_I	Capture	Illumina_Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
DHX9	1660	broad.mit.edu	36	1	181089175	181089189	+	Splice_Site	DEL	CGGTAAGGCCAGCAC	-	CGGTAAGGCCAGCAC	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	CGGTAAGGCCAGCAC	CGGTAAGGCCAGCAC	-	-	CGGTAAGGCCAGCAC	CGGTAAGGCCAGCAC	Unknown	Valid	Somatic	Phase_I	Capture	Illumina_Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
HEPHL1	341208	broad.mit.edu	36	11	93458971	93458978	+	Frame_Shift_Del	DEL	CCACAACA	-	CCACAACA	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	CCACAACA	CCACAACA	-	-	CCACAACA	CCACAACA	Unknown	Valid	Somatic	Phase_I	Capture	Illumina_Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
KRT82	3888	broad.mit.edu	36	12	51083809	51083821	+	Frame_Shift_Del	DEL	ACGCGGTCCCCGG	-	ACGCGGTCCCCGG	novel	none	TCGA-04-1367-01A-01W-0492-08	TCGA-04-1367-10A-01W-0492-08	ACGCGGTCCCCGG	ACGCGGTCCCCGG	-	-	ACGCGGTCCCCGG	ACGCGGTCCCCGG	Unknown	Valid	Somatic	Phase_I	Capture	Illumina_Capture			Illumina GAIIx	7613dcfe-6866-4b7a-8567-0cc4a9c6c40e	30e559be-9316-4c86-88c9-a5ea0a9cb635
