Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
GPR114	221188	hgsc.bcm.edu	36	16	56158066	56158067	+	Frame_Shift_Ins	INS	-	-	G	novel		TCGA-04-1514-01A-01W-0552-10	TCGA-04-1514-10A-01W-0552-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	2394e0b8-ca4c-4b79-b25f-663828115eb7	789c4060-9897-42ad-abb8-e44d2740bc11
HIVEP1	3096	hgsc.bcm.edu	36	6	12230599	12230599	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-04-1514-01A-01W-0552-10	TCGA-04-1514-10A-01W-0552-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Sanger_PCR_WGA			SOLID	2394e0b8-ca4c-4b79-b25f-663828115eb7	789c4060-9897-42ad-abb8-e44d2740bc11
MGAT5	4249	hgsc.bcm.edu	36	2	134791632	134791633	+	Frame_Shift_Del	DEL	GA	GA	-	novel		TCGA-04-1514-01A-01W-0552-10	TCGA-04-1514-10A-01W-0552-10	GA	GA	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	2394e0b8-ca4c-4b79-b25f-663828115eb7	789c4060-9897-42ad-abb8-e44d2740bc11
ZNF333	84449	hgsc.bcm.edu	36	19	14689502	14689502	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-04-1514-01A-01W-0552-10	TCGA-04-1514-10A-01W-0552-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	2394e0b8-ca4c-4b79-b25f-663828115eb7	789c4060-9897-42ad-abb8-e44d2740bc11
ANKRD52	283373	hgsc.bcm.edu	36	12	54933797	54933797	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-04-1514-01A-01W-0552-10	TCGA-04-1514-10A-01W-0552-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	454_PCR_WGA			SOLID	2394e0b8-ca4c-4b79-b25f-663828115eb7	789c4060-9897-42ad-abb8-e44d2740bc11
CDH9	1007	hgsc.bcm.edu	36	5	27024186	27024186	+	Silent	SNP	G	G	A	novel		TCGA-04-1514-01A-01W-0552-10	TCGA-04-1514-10A-01W-0552-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	454_PCR_WGA			SOLID	2394e0b8-ca4c-4b79-b25f-663828115eb7	789c4060-9897-42ad-abb8-e44d2740bc11
COPS8	10920	hgsc.bcm.edu	36	2	237663282	237663282	+	Silent	SNP	A	A	G	novel		TCGA-04-1514-01A-01W-0552-10	TCGA-04-1514-10A-01W-0552-10	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	454_PCR_WGA			SOLID	2394e0b8-ca4c-4b79-b25f-663828115eb7	789c4060-9897-42ad-abb8-e44d2740bc11
CXorf22	170063	hgsc.bcm.edu	36	X	35895718	35895718	+	Silent	SNP	C	C	T	novel		TCGA-04-1514-01A-01W-0552-10	TCGA-04-1514-10A-01W-0552-10	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	454_PCR_WGA			SOLID	2394e0b8-ca4c-4b79-b25f-663828115eb7	789c4060-9897-42ad-abb8-e44d2740bc11
HNRNPH3	3189	hgsc.bcm.edu	36	10	69771797	69771797	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-04-1514-01A-01W-0552-10	TCGA-04-1514-10A-01W-0552-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	454_PCR_WGA			SOLID	2394e0b8-ca4c-4b79-b25f-663828115eb7	789c4060-9897-42ad-abb8-e44d2740bc11
HOOK3	84376	hgsc.bcm.edu	36	8	42933554	42933554	+	Silent	SNP	A	A	C	novel		TCGA-04-1514-01A-01W-0552-10	TCGA-04-1514-10A-01W-0552-10	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	454_PCR_WGA			SOLID	2394e0b8-ca4c-4b79-b25f-663828115eb7	789c4060-9897-42ad-abb8-e44d2740bc11
PAPPA	5069	hgsc.bcm.edu	36	9	118133454	118133454	+	Silent	SNP	C	C	A	novel		TCGA-04-1514-01A-01W-0552-10	TCGA-04-1514-10A-01W-0552-10	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	454_PCR_WGA			SOLID	2394e0b8-ca4c-4b79-b25f-663828115eb7	789c4060-9897-42ad-abb8-e44d2740bc11
TMEM132D	121256	hgsc.bcm.edu	36	12	128124502	128124502	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-04-1514-01A-01W-0552-10	TCGA-04-1514-10A-01W-0552-10	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	454_PCR_WGA			SOLID	2394e0b8-ca4c-4b79-b25f-663828115eb7	789c4060-9897-42ad-abb8-e44d2740bc11
YIPF1	54432	hgsc.bcm.edu	36	1	54104629	54104629	+	Silent	SNP	G	G	A	novel		TCGA-04-1514-01A-01W-0552-10	TCGA-04-1514-10A-01W-0552-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	454_PCR_WGA			SOLID	2394e0b8-ca4c-4b79-b25f-663828115eb7	789c4060-9897-42ad-abb8-e44d2740bc11
PLCD4	84812	hgsc.bcm.edu	36	2	219206683	219206683	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-04-1514-01A-01W-0552-10	TCGA-04-1514-10A-01W-0552-10	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	2394e0b8-ca4c-4b79-b25f-663828115eb7	789c4060-9897-42ad-abb8-e44d2740bc11
AMPD3	272	hgsc.bcm.edu	36	11	10463033	10463033	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-04-1514-01A-01W-0552-10	TCGA-04-1514-10A-01W-0552-10	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Sanger_PCR_WGA			SOLID	2394e0b8-ca4c-4b79-b25f-663828115eb7	789c4060-9897-42ad-abb8-e44d2740bc11
C4orf14	84273	hgsc.bcm.edu	36	4	57525376	57525376	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-04-1514-01A-01W-0552-10	TCGA-04-1514-10A-01W-0552-10	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Sanger_PCR_WGA			SOLID	2394e0b8-ca4c-4b79-b25f-663828115eb7	789c4060-9897-42ad-abb8-e44d2740bc11
C9orf50	375759	hgsc.bcm.edu	36	9	131415664	131415664	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-04-1514-01A-01W-0552-10	TCGA-04-1514-10A-01W-0552-10	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Sanger_PCR_WGA			SOLID	2394e0b8-ca4c-4b79-b25f-663828115eb7	789c4060-9897-42ad-abb8-e44d2740bc11
CHD8	57680	hgsc.bcm.edu	36	14	20940066	20940066	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-04-1514-01A-01W-0552-10	TCGA-04-1514-10A-01W-0552-10	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Sanger_PCR_WGA			SOLID	2394e0b8-ca4c-4b79-b25f-663828115eb7	789c4060-9897-42ad-abb8-e44d2740bc11
CHN1	1123	hgsc.bcm.edu	36	2	175525161	175525161	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-04-1514-01A-01W-0552-10	TCGA-04-1514-10A-01W-0552-10	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Sanger_PCR_WGA			SOLID	2394e0b8-ca4c-4b79-b25f-663828115eb7	789c4060-9897-42ad-abb8-e44d2740bc11
CTNNB1	1499	hgsc.bcm.edu	36	3	41250773	41250773	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-04-1514-01A-01W-0552-10	TCGA-04-1514-10A-01W-0552-10	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Sanger_PCR_WGA			SOLID	2394e0b8-ca4c-4b79-b25f-663828115eb7	789c4060-9897-42ad-abb8-e44d2740bc11
LRP1B	53353	hgsc.bcm.edu	36	2	141341666	141341666	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-04-1514-01A-01W-0552-10	TCGA-04-1514-10A-01W-0552-10	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Sanger_PCR_WGA			SOLID	2394e0b8-ca4c-4b79-b25f-663828115eb7	789c4060-9897-42ad-abb8-e44d2740bc11
MARCO	8685	hgsc.bcm.edu	36	2	119448588	119448588	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-04-1514-01A-01W-0552-10	TCGA-04-1514-10A-01W-0552-10	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Sanger_PCR_WGA			SOLID	2394e0b8-ca4c-4b79-b25f-663828115eb7	789c4060-9897-42ad-abb8-e44d2740bc11
MORN1	79906	hgsc.bcm.edu	36	1	2295839	2295839	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-04-1514-01A-01W-0552-10	TCGA-04-1514-10A-01W-0552-10	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Sanger_PCR_WGA			SOLID	2394e0b8-ca4c-4b79-b25f-663828115eb7	789c4060-9897-42ad-abb8-e44d2740bc11
OR10W1	81341	hgsc.bcm.edu	36	11	57791172	57791172	+	Nonsense_Mutation	SNP	G	G	T	novel		TCGA-04-1514-01A-01W-0552-10	TCGA-04-1514-10A-01W-0552-10	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Sanger_PCR_WGA			SOLID	2394e0b8-ca4c-4b79-b25f-663828115eb7	789c4060-9897-42ad-abb8-e44d2740bc11
PFN4	375189	hgsc.bcm.edu	36	2	24198905	24198905	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-04-1514-01A-01W-0552-10	TCGA-04-1514-10A-01W-0552-10	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Sanger_PCR_WGA			SOLID	2394e0b8-ca4c-4b79-b25f-663828115eb7	789c4060-9897-42ad-abb8-e44d2740bc11
PREP	5550	hgsc.bcm.edu	36	6	105928083	105928083	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-04-1514-01A-01W-0552-10	TCGA-04-1514-10A-01W-0552-10	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Sanger_PCR_WGA			SOLID	2394e0b8-ca4c-4b79-b25f-663828115eb7	789c4060-9897-42ad-abb8-e44d2740bc11
PSME4	23198	hgsc.bcm.edu	36	2	53947483	53947483	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-04-1514-01A-01W-0552-10	TCGA-04-1514-10A-01W-0552-10	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Sanger_PCR_WGA			SOLID	2394e0b8-ca4c-4b79-b25f-663828115eb7	789c4060-9897-42ad-abb8-e44d2740bc11
ROR1	4919	hgsc.bcm.edu	36	1	64287993	64287993	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-04-1514-01A-01W-0552-10	TCGA-04-1514-10A-01W-0552-10	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Sanger_PCR_WGA			SOLID	2394e0b8-ca4c-4b79-b25f-663828115eb7	789c4060-9897-42ad-abb8-e44d2740bc11
STAB2	55576	hgsc.bcm.edu	36	12	102679209	102679209	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-04-1514-01A-01W-0552-10	TCGA-04-1514-10A-01W-0552-10	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Sanger_PCR_WGA			SOLID	2394e0b8-ca4c-4b79-b25f-663828115eb7	789c4060-9897-42ad-abb8-e44d2740bc11
TP53	7157	hgsc.bcm.edu	36	17	7519281	7519281	+	Splice_Site	SNP	T	C	C	novel		TCGA-04-1514-01A-01W-0552-10	TCGA-04-1514-10A-01W-0552-10	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Sanger_PCR_WGA			SOLID	2394e0b8-ca4c-4b79-b25f-663828115eb7	789c4060-9897-42ad-abb8-e44d2740bc11
ZNF211	10520	hgsc.bcm.edu	36	19	62844913	62844913	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-04-1514-01A-01W-0552-10	TCGA-04-1514-10A-01W-0552-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Sanger_PCR_WGA			SOLID	2394e0b8-ca4c-4b79-b25f-663828115eb7	789c4060-9897-42ad-abb8-e44d2740bc11
