Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error
ASMTL	8623	genome.wustl.edu	36	X	1506842	1506842	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	X	1506842	1506842	A	G	SNP	ASMTL	NM_004192	human	genbank	54_36p	-1	validated	missense	c.682	p.S228P	0.995	HMMPfam_Maf	"superfamily_Maf/Ham1,HMMPfam_Maf,superfamily_""Winged helix"" DNA-binding domain,HMMPfam_Methyltransf_2,superfamily_S-adenosyl-L-methionine-dependent methyltransferases"	-	no_errors
LOC390033	390033	genome.wustl.edu	36	11	4316532	4316532	+	Silent	SNP	T	T	C	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	11	4316532	4316532	T	C	SNP	LOC390033	XM_372345	human	genbank	54_36p	-1	model	silent	c.519	p.E173	0.680	HMMPfam_Ssu72	HMMPfam_Ssu72	-	pseudogene
TP53	7157	genome.wustl.edu	36	17	7518915	7518915	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	17	7518915	7518915	T	C	SNP	TP53	NM_000546	human	genbank	54_36p	-1	reviewed	missense	c.659	p.Y220C	1.000	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors
MUC16	94025	genome.wustl.edu	36	19	8950322	8950322	+	Silent	SNP	C	C	T	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	19	8950322	8950322	C	T	SNP	MUC16	NM_024690	human	genbank	54_36p	-1	validated	silent	c.2493	p.S831	0.003	NULL	PatternScan_ATPASE_ALPHA_BETA,superfamily_SEA domain,HMMSmart_SM00200,HMMPfam_SEA	-	no_errors
KLF1	10661	genome.wustl.edu	36	19	12856856	12856856	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	19	12856856	12856856	C	T	SNP	KLF1	NM_006563	human	genbank	54_36p	-1	validated	missense	c.932	p.C311Y	1.000	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
OR11H7	0	genome.wustl.edu	36	14	19768030	19768030	+	Silent	SNP	C	C	A	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	14	19768030	19768030	C	A	SNP	OR11H7	ENST00000315508	human	ensembl	54_36p	+1	known	silent	c.630	p.T210	0.007	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
MAS1L	116511	genome.wustl.edu	36	6	29562555	29562555	+	Silent	SNP	A	T	T	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	6	29562555	29562555	A	T	SNP	MAS1L	NM_052967	human	genbank	54_36p	-1	provisional	silent	c.1104	p.L368	0.000	NULL	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
TM9SF4	9777	genome.wustl.edu	36	20	30184573	30184573	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	20	30184573	30184573	G	A	SNP	TM9SF4	NM_014742	human	genbank	54_36p	+1	validated	missense	c.61	p.D21N	0.997	NULL	HMMPfam_EMP70	-	no_errors
NCOA6	23054	genome.wustl.edu	36	20	32801356	32801356	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	20	32801356	32801356	G	A	SNP	NCOA6	NM_014071	human	genbank	54_36p	-1	reviewed	missense	c.2303	p.P768L	0.962	NULL	NULL	-	no_errors
CACNB1	782	genome.wustl.edu	36	17	34593581	34593581	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	17	34593581	34593581	G	C	SNP	CACNB1	NM_000723	human	genbank	54_36p	-1	reviewed	missense	c.961	p.L321V	0.988	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Ca_channel_B,HMMSmart_SM00072	superfamily_SH3-domain,HMMPfam_SH3_1,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Ca_channel_B,HMMSmart_SM00072	-	no_errors
KRT14	3861	genome.wustl.edu	36	17	36992304	36992304	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	17	36992304	36992304	G	A	SNP	KRT14	NM_000526	human	genbank	54_36p	-1	reviewed	missense	c.1328	p.S443F	1.000	NULL	HMMPfam_Filament,superfamily_Prefoldin,PatternScan_IF	-	no_errors
WDR62	284403	genome.wustl.edu	36	19	41285766	41285766	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	19	41285766	41285766	G	A	SNP	WDR62	NM_001083961	human	genbank	54_36p	+1	validated	missense	c.3412	p.G1138R	0.002	NULL	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	-	no_errors
MAST2	23139	genome.wustl.edu	36	1	46272799	46272799	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	1	46272799	46272799	G	A	SNP	MAST2	NM_015112	human	genbank	54_36p	+1	validated	missense	c.3871	p.G1291R	1.000	NULL	HMMPfam_DUF1908,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ST,HMMPfam_Pkinase_C,superfamily_PDZ domain-like,HMMSmart_SM00228,HMMPfam_PDZ	-	no_errors
MLL2	8085	genome.wustl.edu	36	12	47713736	47713736	+	Silent	SNP	A	A	T	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	12	47713736	47713736	A	T	SNP	MLL2	NM_003482	human	genbank	54_36p	-1	validated	silent	c.11019	p.L3673	0.903	NULL	superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMSmart_SM00184,PatternScan_ZF_PHD_1,HMMPfam_PHD,PatternScan_RECOMBINASES_2,HMMSmart_SM00398,superfamily_HMG-box,HMMPfam_HMG_box,HMMPfam_FYRN,HMMSmart_SM00541,HMMPfam_FYRC,HMMSmart_SM00542,superfamily_SET domain,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00508	-	no_errors
FOXP3	50943	genome.wustl.edu	36	X	49000373	49000373	+	Silent	SNP	C	T	T	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	X	49000373	49000373	C	T	SNP	FOXP3	NM_014009	human	genbank	54_36p	-1	reviewed	silent	c.495	p.P165	0.985	NULL	"PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00339,superfamily_""Winged helix"" DNA-binding domain,HMMPfam_Fork_head,PatternScan_FORK_HEAD_2"	-	no_errors
CLPTM1	1209	genome.wustl.edu	36	19	50185518	50185518	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	19	50185518	50185518	G	C	SNP	CLPTM1	NM_001294	human	genbank	54_36p	+1	provisional	missense	c.1158	p.Q386H	1.000	HMMPfam_CLPTM1	HMMPfam_CLPTM1	-	no_errors
KRT5	3852	genome.wustl.edu	36	12	51199876	51199876	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	12	51199876	51199876	C	T	SNP	KRT5	NM_000424	human	genbank	54_36p	-1	reviewed	missense	c.472	p.D158N	1.000	NULL	HMMPfam_Filament,PatternScan_IF	-	no_errors
KIT	3815	genome.wustl.edu	36	4	55288964	55288964	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	4	55288964	55288964	T	A	SNP	KIT	NM_000222	human	genbank	54_36p	+1	reviewed	missense	c.1910	p.L637H	1.000	superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc	superfamily_SSF48726,HMMSmart_IGc2,HMMPfam_ig,HMMSmart_IG,superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_PROTEIN_KINASE_ATP,PatternScan_RECEPTOR_TYR_KIN_III,PatternScan_PROTEIN_KINASE_TYR	-	no_errors
MIER3	166968	genome.wustl.edu	36	5	56255383	56255383	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	5	56255383	56255383	C	A	SNP	MIER3	NM_152622	human	genbank	54_36p	-1	validated	missense	c.1084	p.A362S	1.000	NULL	PatternScan_EF_HAND_1,HMMPfam_ELM2,superfamily_Homeodomain_like,HMMSmart_SANT,HMMPfam_Myb_DNA-binding	-	no_errors
LOC402509	402509	genome.wustl.edu	36	7	57088338	57088338	+	Silent	SNP	G	G	C	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	7	57088338	57088338	G	C	SNP	LOC402509	XM_379840	human	genbank	54_36p	-1	model	silent	c.741	p.P247	0.803	HMMPfam_Nucleoside_tran	HMMPfam_Nucleoside_tran	-	no_errors
VPS13C	54832	genome.wustl.edu	36	15	60046868	60046868	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	15	60046868	60046868	C	A	SNP	VPS13C	NM_020821	human	genbank	54_36p	-1	validated	missense	c.2982	p.E994D	0.996	NULL	HMMPfam_DUF1162	-	no_errors
ENAM	10117	genome.wustl.edu	36	4	71729329	71729329	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	4	71729329	71729329	A	G	SNP	ENAM	NM_031889	human	genbank	54_36p	+1	validated	missense	c.3322	p.I1108V	0.001	NULL	NULL	-	no_errors
SHROOM3	57619	genome.wustl.edu	36	4	77895286	77895286	+	Silent	SNP	C	C	T	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	4	77895286	77895286	C	T	SNP	SHROOM3	NM_020859	human	genbank	54_36p	+1	validated	silent	c.4623	p.S1541	0.000	NULL	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,HMMPfam_ASD1,HMMPfam_ASD2	-	no_errors
SAMD9	54809	genome.wustl.edu	36	7	92572493	92572493	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	7	92572493	92572493	C	T	SNP	SAMD9	NM_017654	human	genbank	54_36p	-1	validated	missense	c.854	p.R285Q	0.797	NULL	superfamily_SAM_homology,HMMSmart_SAM,HMMPfam_SAM_1	-	no_errors
LOC407835	407835	genome.wustl.edu	36	7	128554804	128554804	+	RNA	SNP	C	C	T	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	7	128554804	128554804	C	T	SNP	LOC407835	NR_002144	human	genbank	54_36p	+1	provisional	rna	NULL	NULL	1.000	-	-	-	pseudogene
TSC1	7248	genome.wustl.edu	36	9	134771199	134771199	+	Silent	SNP	G	A	A	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	9	134771199	134771199	G	A	SNP	TSC1	NM_000368	human	genbank	54_36p	-1	validated	silent	c.1587	p.A529	0.000	HMMPfam_Hamartin	HMMPfam_Hamartin	-	no_errors
PCDHGA1	56114	genome.wustl.edu	36	5	140692633	140692633	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	5	140692633	140692633	C	T	SNP	PCDHGA1	NM_018912	human	genbank	54_36p	+1	reviewed	missense	c.2198	p.A733V	0.000	NULL	HMMPfam_Cadherin_2,superfamily_Cadherin-like,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors
RBM16	22828	genome.wustl.edu	36	6	155181387	155181387	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	6	155181387	155181387	G	T	SNP	RBM16	NM_014892	human	genbank	54_36p	+1	validated	missense	c.1604	p.G535V	1.000	superfamily_SSF54928,HMMSmart_RRM,HMMPfam_RRM_1	superfamily_ENTH_VHS,HMMSmart_RPR,HMMPfam_DUF618,superfamily_SSF54928,HMMSmart_RRM,HMMPfam_RRM_1	-	no_errors
SDHC	6391	genome.wustl.edu	36	1	159550838	159550838	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	1	159550838	159550838	A	C	SNP	SDHC	NM_001035513	human	genbank	54_36p	+1	reviewed	missense	c.19	p.S7R	1.000	HMMPfam_Sdh_cyt	HMMPfam_Sdh_cyt,superfamily_SSF81343,PatternScan_SDH_CYT_2	-	no_errors
SCN1A	6323	genome.wustl.edu	36	2	166638242	166638242	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	2	166638242	166638242	C	T	SNP	SCN1A	NM_006920	human	genbank	54_36p	-1	validated	missense	c.136	p.E46K	1.000	superfamily_SSF81324	superfamily_SSF81324,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc,HMMSmart_IQ,HMMPfam_IQ,PatternScan_RIBONUCLEASE_P	-	no_errors
C6orf70	55780	genome.wustl.edu	36	6	169923411	169923411	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	6	169923411	169923411	G	C	SNP	C6orf70	NM_018341	human	genbank	54_36p	+1	validated	missense	c.1914	p.K638N	0.922	NULL	NULL	-	no_errors
ALPI	248	genome.wustl.edu	36	2	233029950	233029950	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	2	233029950	233029950	C	A	SNP	ALPI	NM_001631	human	genbank	54_36p	+1	reviewed	missense	c.398	p.A133E	0.995	superfamily_Alkaline phosphatase-like,HMMPfam_Alk_phosphatase,HMMSmart_SM00098	superfamily_Alkaline phosphatase-like,HMMPfam_Alk_phosphatase,HMMSmart_SM00098,PatternScan_ALKALINE_PHOSPHATASE	-	no_errors
POLG	5428	genome.wustl.edu	36	15	87677831	87677832	+	In_Frame_Ins	INS	-	-	TGC	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	-	-					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	15	87677831	87677832	-	TGC	INS	POLG	NM_002693	human	genbank	54_36p	-1	reviewed	in_frame_ins	c.159_158	p.56in_frame_insQ	0.017:0.017	NULL	superfamily_SSF56672,HMMPfam_DNA_pol_A,HMMSmart_POLAc,PatternScan_DNA_POLYMERASE_A	-	no_errors
ZAN	7455	genome.wustl.edu	36	7	100223498	100223532	+	Frame_Shift_Del	DEL	GCTTCAGCTACCGCTTGCAAGGCCGCATGACCTAT	GCTTCAGCTACCGCTTGCAAGGCCGCATGACCTAT	-	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	GCTTCAGCTACCGCTTGCAAGGCCGCATGACCTAT	GCTTCAGCTACCGCTTGCAAGGCCGCATGACCTAT					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	7	100223498	100223532	GCTTCAGCTACCGCTTGCAAGGCCGCATGACCTAT	-	DEL	ZAN	ENST00000349350	human	ensembl	54_36p	+1	known	frame_shift_del	c.7028_7062	p.F2344fs	0.088:0.076:0.047:0.031:0.008:0.004:0.007:0.317:0.790:0.908:0.967:0.964:0.963:0.997:1.000:0.999:0.997:0.968:0.891:0.954:1.000:1.000:1.000:0.999:0.998:0.998:1.000:0.999:1.000:1.000:1.000:1.000:1.000:0.990:0.736	HMMSmart_SM00216,HMMPfam_VWD	HMMSmart_SM00137,HMMPfam_MAM,PatternScan_MAM_1,superfamily_Serine proterase inhibitors,HMMPfam_TIL,PatternScan_EGF_2,HMMSmart_SM00215,HMMPfam_TIL_assoc,HMMSmart_SM00216,HMMPfam_VWD,HMMPfam_C8,HMMSmart_SM00181,HMMSmart_SM00214,superfamily_EGF/Laminin,HMMPfam_EGF,PatternScan_EGF_1	(deletion:cds_exon[100223447,100223694])	no_errors
HSPA8	3312	genome.wustl.edu	36	11	122435503	122435513	+	Frame_Shift_Del	DEL	CAGGACAATAT	CAGGACAATAT	-	novel	unknown	TCGA-04-1646-01A-01W-0639-09	TCGA-04-1646-11A-01W-0639-09	CAGGACAATAT	CAGGACAATAT					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	85e723d0-83fa-4654-8c17-5fe4f2801487	813465a1-876e-41e3-aed3-456efa85637d	11	122435503	122435513	CAGGACAATAT	-	DEL	HSPA8	NM_006597	human	genbank	54_36p	-1	reviewed	frame_shift_del	c.1008_998	p.D333fs	1.000:1.000:0.970:0.994:1.000:1.000:1.000:1.000:1.000:0.940:1.000	HMMPfam_HSP70,superfamily_Actin-like ATPase domain	superfamily_Actin-like ATPase domain,HMMPfam_HSP70,PatternScan_HSP70_1,PatternScan_HSP70_2,PatternScan_HSP70_3,superfamily_Heat shock protein 70kD (HSP70) peptide-binding domain,superfamily_Heat shock protein 70kD (HSP70) C-terminal subdomain	(deletion:cds_exon[122435391,122435946])	no_errors
