Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
CHD5	26038	broad.mit.edu	36	1	6111605	6111605	+	Missense_Mutation	SNP	T	T	C	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
LCK	3932	broad.mit.edu	36	1	32518373	32518373	+	Silent	SNP	C	C	T	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
PHC2	1912	broad.mit.edu	36	1	33567230	33567230	+	Missense_Mutation	SNP	C	C	G	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
MAP7D1	55700	broad.mit.edu	36	1	36418127	36418127	+	Missense_Mutation	SNP	A	A	G	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	A	A	G	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
KLF17	128209	broad.mit.edu	36	1	44368256	44368256	+	Missense_Mutation	SNP	G	G	T	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
ERI3	79033	broad.mit.edu	36	1	44551427	44551427	+	Splice_Site	SNP	C	C	G	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
ROR1	4919	broad.mit.edu	36	1	64416902	64416902	+	Missense_Mutation	SNP	A	A	G	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	A	A	G	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
ASB17	127247	broad.mit.edu	36	1	76170547	76170547	+	Missense_Mutation	SNP	T	T	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	T	T	A	A	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
HBXIP	10542	broad.mit.edu	36	1	110745685	110745685	+	Missense_Mutation	SNP	G	G	T	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
TDRD10	126668	broad.mit.edu	36	1	152783129	152783129	+	Missense_Mutation	SNP	T	T	G	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	T	T	G	G	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
PKLR	5313	broad.mit.edu	36	1	153530996	153530996	+	Missense_Mutation	SNP	C	C	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
INSRR	3645	broad.mit.edu	36	1	155082117	155082117	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
HMCN1	83872	broad.mit.edu	36	1	184164386	184164386	+	Missense_Mutation	SNP	G	G	T	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
MDM4	4194	broad.mit.edu	36	1	202782580	202782580	+	Silent	SNP	G	G	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
PLXNA2	5362	broad.mit.edu	36	1	206336085	206336085	+	Missense_Mutation	SNP	C	C	G	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
EPHX1	2052	broad.mit.edu	36	1	224094163	224094163	+	Missense_Mutation	SNP	G	G	C	rs66903687	unknown	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
OR2M3	127062	broad.mit.edu	36	1	246433390	246433390	+	Missense_Mutation	SNP	C	C	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
HNRNPH3	3189	broad.mit.edu	36	10	69771816	69771816	+	Nonstop_Mutation	SNP	G	G	C	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
VDAC2	7417	broad.mit.edu	36	10	76643806	76643806	+	Missense_Mutation	SNP	A	A	G	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	A	A	G	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
ATRNL1	26033	broad.mit.edu	36	10	117030924	117030924	+	Missense_Mutation	SNP	A	A	T	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	A	A	T	T	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
OR1S2	219958	broad.mit.edu	36	11	57727663	57727663	+	Silent	SNP	G	G	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
CD5	921	broad.mit.edu	36	11	60645770	60645770	+	Missense_Mutation	SNP	C	C	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
INTS5	80789	broad.mit.edu	36	11	62173408	62173408	+	Silent	SNP	G	G	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
MAP4K2	5871	broad.mit.edu	36	11	64313672	64313672	+	Silent	SNP	T	T	C	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
MTL5	9633	broad.mit.edu	36	11	68234924	68234924	+	Missense_Mutation	SNP	T	T	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	T	T	A	A	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
FAT3	120114	broad.mit.edu	36	11	92174160	92174160	+	Missense_Mutation	SNP	C	C	G	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
KDM5A	5927	broad.mit.edu	36	12	287126	287126	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
C12orf35	55196	broad.mit.edu	36	12	32026913	32026913	+	Missense_Mutation	SNP	C	C	G	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
DNAJC22	79962	broad.mit.edu	36	12	48029456	48029456	+	Silent	SNP	C	C	T	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
AQP2	359	broad.mit.edu	36	12	48634705	48634705	+	Missense_Mutation	SNP	A	A	T	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	A	A	T	T	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
FRY	10129	broad.mit.edu	36	13	31709670	31709670	+	Missense_Mutation	SNP	G	G	T	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
PCDH9	5101	broad.mit.edu	36	13	66375734	66375734	+	Missense_Mutation	SNP	T	T	C	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
RNASE7	84659	broad.mit.edu	36	14	20581370	20581370	+	Missense_Mutation	SNP	A	A	C	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	A	A	C	C	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
CTSG	1511	broad.mit.edu	36	14	24113465	24113465	+	Silent	SNP	C	C	T	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
ZFYVE26	23503	broad.mit.edu	36	14	67334698	67334698	+	Silent	SNP	A	A	G	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	A	A	G	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
FAM161B	145483	broad.mit.edu	36	14	73481016	73481016	+	Missense_Mutation	SNP	T	T	C	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
TJP1	7082	broad.mit.edu	36	15	27781168	27781168	+	Missense_Mutation	SNP	G	G	C	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
CHRNA3	1136	broad.mit.edu	36	15	76680771	76680771	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
HDDC3	374659	broad.mit.edu	36	15	89275983	89275983	+	Missense_Mutation	SNP	C	C	G	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
LRRK1	79705	broad.mit.edu	36	15	99412822	99412822	+	Missense_Mutation	SNP	G	G	C	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
CREBBP	1387	broad.mit.edu	36	16	3726811	3726811	+	Silent	SNP	C	C	G	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
USP7	7874	broad.mit.edu	36	16	8921759	8921759	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
ERN2	10595	broad.mit.edu	36	16	23619788	23619788	+	Missense_Mutation	SNP	A	A	G	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	A	A	G	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
CES8	283848	broad.mit.edu	36	16	65587224	65587224	+	Missense_Mutation	SNP	A	A	C	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	A	A	C	C	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
AARS	16	broad.mit.edu	36	16	68861635	68861635	+	Missense_Mutation	SNP	C	C	G	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
TP53	7157	broad.mit.edu	36	17	7518273	7518273	+	Missense_Mutation	SNP	C	C	T	rs28934575	unknown	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
MC5R	4161	broad.mit.edu	36	18	13816276	13816276	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
ANKRD24	170961	broad.mit.edu	36	19	4151140	4151140	+	Silent	SNP	C	C	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
ACSBG2	81616	broad.mit.edu	36	19	6133869	6133869	+	Silent	SNP	C	C	T	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
PSENEN	55851	broad.mit.edu	36	19	40929549	40929549	+	Silent	SNP	G	G	C	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
PXDN	7837	broad.mit.edu	36	2	1659804	1659804	+	Silent	SNP	G	G	C	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
C2orf16	84226	broad.mit.edu	36	2	27656561	27656561	+	Silent	SNP	A	A	G	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	A	A	G	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
HEATR5B	54497	broad.mit.edu	36	2	37084228	37084228	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
AFTPH	54812	broad.mit.edu	36	2	64672626	64672626	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
NAT8	9027	broad.mit.edu	36	2	73721902	73721902	+	Missense_Mutation	SNP	A	A	T	rs62000430	unknown	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	A	A	T	T	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
SLC4A5	57835	broad.mit.edu	36	2	74332886	74332886	+	Missense_Mutation	SNP	C	C	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
DCTN1	1639	broad.mit.edu	36	2	74446964	74446964	+	Nonsense_Mutation	SNP	G	G	C	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
TACR1	6869	broad.mit.edu	36	2	75130159	75130159	+	Missense_Mutation	SNP	A	A	C	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	A	A	C	C	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
KCMF1	56888	broad.mit.edu	36	2	85133839	85133839	+	Silent	SNP	A	A	C	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	A	A	C	C	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
TEKT4	150483	broad.mit.edu	36	2	94903503	94903503	+	Silent	SNP	C	C	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
HNMT	3176	broad.mit.edu	36	2	138487892	138487892	+	Missense_Mutation	SNP	T	T	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	T	T	A	A	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
PKP4	8502	broad.mit.edu	36	2	159227811	159227811	+	Nonsense_Mutation	SNP	A	A	T	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	A	A	T	T	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
FAP	2191	broad.mit.edu	36	2	162735796	162735796	+	Missense_Mutation	SNP	G	G	T	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
EVX2	344191	broad.mit.edu	36	2	176653723	176653723	+	Nonsense_Mutation	SNP	G	G	T	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
ZNF385B	151126	broad.mit.edu	36	2	180117812	180117812	+	Missense_Mutation	SNP	G	G	C	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
ITGA4	3676	broad.mit.edu	36	2	182058900	182058900	+	Missense_Mutation	SNP	A	A	T	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	A	A	T	T	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
CERKL	375298	broad.mit.edu	36	2	182131603	182131603	+	Missense_Mutation	SNP	C	C	G	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
MDH1B	130752	broad.mit.edu	36	2	207322086	207322086	+	Silent	SNP	T	T	C	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
TRAF3IP1	26146	broad.mit.edu	36	2	238929448	238929448	+	Missense_Mutation	SNP	A	A	T	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	A	A	T	T	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
DEFB129	140881	broad.mit.edu	36	20	158247	158247	+	Silent	SNP	C	C	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
NDRG3	57446	broad.mit.edu	36	20	34715422	34715422	+	Missense_Mutation	SNP	G	G	T	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
PRSS7	5651	broad.mit.edu	36	21	18637753	18637753	+	Missense_Mutation	SNP	T	T	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	T	T	A	A	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
KRTAP12-4	386684	broad.mit.edu	36	21	44898949	44898949	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
ZNF280A	129025	broad.mit.edu	36	22	21199652	21199652	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
MYO18B	84700	broad.mit.edu	36	22	24752607	24752607	+	Missense_Mutation	SNP	C	C	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
ANO10	55129	broad.mit.edu	36	3	43593194	43593194	+	Missense_Mutation	SNP	A	A	C	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	A	A	C	C	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
VPRBP	9730	broad.mit.edu	36	3	51492812	51492812	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
GPR15	2838	broad.mit.edu	36	3	99734580	99734580	+	Missense_Mutation	SNP	C	C	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
TMEM45A	55076	broad.mit.edu	36	3	101770431	101770431	+	Missense_Mutation	SNP	A	A	T	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	A	A	T	T	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
GOLGB1	2804	broad.mit.edu	36	3	122898824	122898824	+	Missense_Mutation	SNP	T	T	G	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	T	T	G	G	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
COL6A6	131873	broad.mit.edu	36	3	131783252	131783252	+	Silent	SNP	T	T	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	T	T	A	A	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
PCOLCE2	26577	broad.mit.edu	36	3	144025146	144025146	+	Silent	SNP	A	A	G	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	A	A	G	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
IGSF10	285313	broad.mit.edu	36	3	152649167	152649167	+	Missense_Mutation	SNP	T	T	C	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
ZDHHC19	131540	broad.mit.edu	36	3	197409615	197409615	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
GNRHR	2798	broad.mit.edu	36	4	68302523	68302523	+	Silent	SNP	A	A	G	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	A	A	G	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
MMAA	166785	broad.mit.edu	36	4	146794600	146794600	+	Missense_Mutation	SNP	T	T	C	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
PDLIM3	27295	broad.mit.edu	36	4	186666465	186666465	+	Missense_Mutation	SNP	C	C	G	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
FAM105B	90268	broad.mit.edu	36	5	14734611	14734611	+	Silent	SNP	G	G	T	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
RICTOR	253260	broad.mit.edu	36	5	38985589	38985589	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
TRIM36	55521	broad.mit.edu	36	5	114497705	114497705	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
CHSY3	337876	broad.mit.edu	36	5	129549287	129549287	+	Missense_Mutation	SNP	A	A	T	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	A	A	T	T	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
GLRA1	2741	broad.mit.edu	36	5	151214884	151214884	+	Missense_Mutation	SNP	C	C	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
OR12D3	81797	broad.mit.edu	36	6	29450706	29450706	+	Missense_Mutation	SNP	A	A	T	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	A	A	T	T	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
GABBR1	2550	broad.mit.edu	36	6	29697547	29697547	+	Silent	SNP	T	T	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	T	T	A	A	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
VPS52	6293	broad.mit.edu	36	6	33344342	33344342	+	Missense_Mutation	SNP	G	G	C	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
TAPBP	6892	broad.mit.edu	36	6	33380127	33380127	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
GFRAL	389400	broad.mit.edu	36	6	55324010	55324010	+	Missense_Mutation	SNP	G	G	T	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
DST	667	broad.mit.edu	36	6	56579920	56579920	+	Missense_Mutation	SNP	G	G	T	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
EPHA7	2045	broad.mit.edu	36	6	94177450	94177450	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
VNN1	8876	broad.mit.edu	36	6	133046083	133046083	+	Silent	SNP	C	C	T	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
ZNF680	340252	broad.mit.edu	36	7	63642220	63642220	+	Missense_Mutation	SNP	G	G	T	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
ELN	2006	broad.mit.edu	36	7	73109929	73109929	+	Missense_Mutation	SNP	G	G	T	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
CLCN1	1180	broad.mit.edu	36	7	142729031	142729031	+	Missense_Mutation	SNP	G	G	T	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
HMBOX1	79618	broad.mit.edu	36	8	28932300	28932300	+	Missense_Mutation	SNP	C	C	G	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
MYST3	7994	broad.mit.edu	36	8	41924575	41924575	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
SLC20A2	6575	broad.mit.edu	36	8	42406894	42406894	+	Missense_Mutation	SNP	C	C	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
PLEKHF2	79666	broad.mit.edu	36	8	96236166	96236166	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
DEPDC6	64798	broad.mit.edu	36	8	121130995	121130995	+	Splice_Site	SNP	G	G	T	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
KIFC2	90990	broad.mit.edu	36	8	145665712	145665712	+	Silent	SNP	A	A	C	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	A	A	C	C	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
DFNB31	25861	broad.mit.edu	36	9	116306424	116306424	+	Missense_Mutation	SNP	G	G	C	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
RXRA	6256	broad.mit.edu	36	9	136465823	136465823	+	Missense_Mutation	SNP	A	A	G	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	A	A	G	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
CXorf23	256643	broad.mit.edu	36	X	19893693	19893693	+	Missense_Mutation	SNP	T	T	C	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
KLF8	11279	broad.mit.edu	36	X	56308437	56308437	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
RGAG4	340526	broad.mit.edu	36	X	71267780	71267780	+	Silent	SNP	G	G	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
MAGEC1	9947	broad.mit.edu	36	X	140823425	140823425	+	Missense_Mutation	SNP	T	T	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	T	T	A	A	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
HCFC1	3054	broad.mit.edu	36	X	152889377	152889377	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
CUBN	8029	broad.mit.edu	36	10	16995954	16995954	+	Frame_Shift_Del	DEL	A	-	A	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	A	A	-	-	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Illumina_Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
ZNF264	9422	broad.mit.edu	36	19	62416080	62416096	+	Frame_Shift_Del	DEL	AAATATTTTGCCAGAGG	-	AAATATTTTGCCAGAGG	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	AAATATTTTGCCAGAGG	AAATATTTTGCCAGAGG	-	-	AAATATTTTGCCAGAGG	AAATATTTTGCCAGAGG	Unknown	Valid	Somatic	Phase_I	Capture	Illumina_Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
MYO7B	4648	broad.mit.edu	36	2	128082867	128082867	+	Frame_Shift_Del	DEL	G	-	G	novel	none	TCGA-09-2049-01D-01W-0799-08	TCGA-09-2049-10A-01W-0799-08	G	G	-	-	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Illumina_Capture			Illumina GAIIx	85345835-e470-4a69-a1b7-45baff9a83d0	83836b9c-ed54-44a2-9938-396efbd69330
