Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error
TARDBP	23435	genome.wustl.edu	36	1	11005039	11005039	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	1	11005039	11005039	C	T	SNP	TARDBP	NM_007375	human	genbank	54_36p	1	reviewed	missense	c.986	p.A329V	1	NULL	-	-	no_errors
KCNA3	3738	genome.wustl.edu	36	1	111017553	111017553	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	1	111017553	111017553	C	T	SNP	KCNA3	NM_002232	human	genbank	54_36p	-1	reviewed	missense	c.1402	p.G468S	1	NULL	-	-	no_errors
C1orf103	55791	genome.wustl.edu	36	1	111295733	111295733	+	Silent	SNP	G	G	C	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	1	111295733	111295733	G	C	SNP	C1orf103	NM_018372	human	genbank	54_36p	-1	validated	silent	c.1296	p.T432		NULL	-	-	no_errors
HIST2H2BE	8349	genome.wustl.edu	36	1	148124586	148124586	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	1	148124586	148124586	C	G	SNP	HIST2H2BE	NM_003528	human	genbank	54_36p	-1	reviewed	missense	c.229	p.E77Q	1	NULL	-	-	no_errors
NES	10763	genome.wustl.edu	36	1	154906180	154906180	+	Missense_Mutation	SNP	C	C	T		Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	1	154906180	154906180	C	T	SNP	NES	NM_006617	human	genbank	54_36p	-1	reviewed	missense	c.4424	p.G1475D	0.002	NULL	HMMPfam_Filament	-	no_errors
OR10J3	441911	genome.wustl.edu	36	1	157550271	157550271	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	1	157550271	157550271	G	A	SNP	OR10J3	NM_001004467	human	genbank	54_36p	-1	provisional	missense	c.803	p.S268F		NULL	-	-	no_errors
MPZL1	9019	genome.wustl.edu	36	1	166009187	166009187	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	1	166009187	166009187	C	G	SNP	MPZL1	NM_003953	human	genbank	54_36p	1	validated	missense	c.563	p.A188G	0.94	NULL	HMMPfam_V-set;superfamily_Immunoglobulin	-	no_errors
ASTN1	460	genome.wustl.edu	36	1	175268522	175268522	+	Silent	SNP	G	G	C		Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	1	175268522	175268522	G	C	SNP	ASTN1	NM_004319	human	genbank	54_36p	-1	validated	silent	c.558	p.V186	0.625	NULL	superfamily_Fibronectin type III,superfamily_EGF/Laminin	-	no_errors
FAM20B	9917	genome.wustl.edu	36	1	177279865	177279865	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	1	177279865	177279865	T	G	SNP	FAM20B	NM_014864	human	genbank	54_36p	1	validated	missense	c.260	p.V87G	1	NULL	-	-	no_errors
DHX9	1660	genome.wustl.edu	36	1	181112227	181112227	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	1	181112227	181112227	A	G	SNP	DHX9	NM_001357	human	genbank	54_36p	1	reviewed	silent	c.2052	p.L684	0.98	HMMPfam_Helicase_C	HMMPfam_dsrm;HMMPfam_Helicase_C;HMMPfam_HA2;HMMPfam_DEAD;HMMPfam_DUF1605;superfamily_P-loop containing nucleoside triphosphate hydrolases;superfamily_dsRNA-binding domain-like	-	no_errors
RGL1	23179	genome.wustl.edu	36	1	182147925	182147925	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	1	182147925	182147925	G	C	SNP	RGL1	NM_015149	human	genbank	54_36p	1	validated	missense	c.1754	p.S585T	1	NULL	HMMPfam_RA;HMMPfam_RasGEF_N;HMMPfam_RasGEF;superfamily_Ras GEF;superfamily_Ubiquitin-like	-	no_errors
C1orf26	54823	genome.wustl.edu	36	1	183410550	183410550	+	Silent	SNP	C	C	T		Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	1	183410550	183410550	C	T	SNP	C1orf26	NM_001105518	human	genbank	54_36p	1	validated	silent	c.648	p.N216	0	NULL	-	-	no_errors
HMCN1	83872	genome.wustl.edu	36	1	184159201	184159201	+	Missense_Mutation	SNP	G	G	A		Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	1	184159201	184159201	G	A	SNP	HMCN1	NM_031935	human	genbank	54_36p	1	reviewed	missense	c.1078	p.D360N	1	NULL	-	-	no_errors
UBR4	23352	genome.wustl.edu	36	1	19316494	19316494	+	Missense_Mutation	SNP	T	T	A		Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	1	19316494	19316494	T	A	SNP	UBR4	NM_020765	human	genbank	54_36p	-1	validated	missense	c.10631	p.Y3544F	1	NULL	-	-	no_errors
AVPR1B	553	genome.wustl.edu	36	1	204391626	204391626	+	Missense_Mutation	SNP	C	C	A		Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	1	204391626	204391626	C	A	SNP	AVPR1B	NM_000707	human	genbank	54_36p	1	reviewed	missense	c.563	p.A188E	0.997	NULL	-	-	no_errors
RYR2	6262	genome.wustl.edu	36	1	235722886	235722886	+	Missense_Mutation	SNP	G	G	A		Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	1	235722886	235722886	G	A	SNP	RYR2	NM_001035	human	genbank	54_36p	1	reviewed	missense	c.1837	p.V613I	0.975	HMMPfam_RYDR_ITPR	HMMPfam_RYDR_ITPR,HMMPfam_efhand,HMMPfam_RyR,HMMPfam_MIR,HMMPfam_SPRY,HMMPfam_Ion_trans,HMMPfam_RR_TM4-6,HMMPfam_RIH_assoc,HMMPfam_Ins145_P3_rec,superfamily_EF-hand,superfamily_MIR domain (Pfam 02815)	-	no_errors
RYR2	6262	genome.wustl.edu	36	1	235947258	235947258	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	1	235947258	235947258	G	C	SNP	RYR2	NM_001035	human	genbank	54_36p	1	reviewed	missense	c.10461	p.E3487D	0.99	HMMPfam_RIH_assoc	HMMPfam_RYDR_ITPR;HMMPfam_efhand;HMMPfam_RyR;HMMPfam_MIR;HMMPfam_SPRY;HMMPfam_Ion_trans;HMMPfam_RR_TM4-6;HMMPfam_RIH_assoc;HMMPfam_Ins145_P3_rec;superfamily_EF-hand;superfamily_MIR domain (Pfam 02815)	-	no_errors
KIF26B	55083	genome.wustl.edu	36	1	243770848	243770848	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	1	243770848	243770848	G	C	SNP	KIF26B	NM_018012	human	genbank	54_36p	1	provisional	missense	c.1323	p.K441N	1	NULL	-	-	no_errors
LDLRAP1	26119	genome.wustl.edu	36	1	25753004	25753004	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	1	25753004	25753004	G	T	SNP	LDLRAP1	NM_015627	human	genbank	54_36p	1	reviewed	silent	c.93	p.L31	1	NULL	-	-	no_errors
HCRTR1	3061	genome.wustl.edu	36	1	31857836	31857836	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	1	31857836	31857836	G	T	SNP	HCRTR1	NM_001525	human	genbank	54_36p	1	reviewed	missense	c.316	p.V106L	1	NULL	-	-	no_errors
LOC128192	128192	genome.wustl.edu	36	1	45226714	45226714	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	1	45226714	45226714	G	A	SNP	LOC128192	XM_060887	human	genbank	54_36p	-1	model	missense	c.271	p.H91Y	1	NULL	-	-	no_errors
SLC5A9	200010	genome.wustl.edu	36	1	48477635	48477635	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	1	48477635	48477635	C	T	SNP	SLC5A9	NM_001011547	human	genbank	54_36p	1	validated	silent	c.1570	p.L524	1	NULL	-	-	no_errors
CDCP2	200008	genome.wustl.edu	36	1	54378331	54378331	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	1	54378331	54378331	T	A	SNP	CDCP2	NM_201546	human	genbank	54_36p	-1	provisional	missense	c.800	p.N267I	1	NULL	-	-	no_errors
CYP2J2	1573	genome.wustl.edu	36	1	60131951	60131951	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	1	60131951	60131951	G	T	SNP	CYP2J2	NM_000775	human	genbank	54_36p	-1	reviewed	missense	c.1469	p.S490Y	0.07	HMMPfam_p450	HMMPfam_p450;superfamily_Cytochrome P450	-	no_errors
KANK4	163782	genome.wustl.edu	36	1	62509743	62509743	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	1	62509743	62509743	G	A	SNP	KANK4	NM_181712	human	genbank	54_36p	-1	validated	silent	c.2007	p.N669	1	NULL	-	-	no_errors
C10orf119	79892	genome.wustl.edu	36	10	121609371	121609371	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	10	121609371	121609371	T	A	SNP	C10orf119	NM_024834	human	genbank	54_36p	-1	validated	missense	c.74	p.N25I	0.98	NULL	-	-	no_errors
PIP4K2A	5305	genome.wustl.edu	36	10	22866155	22866155	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA		dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	10	22866155	22866155	A	T	SNP	PIP4K2A	NM_005028	human	genbank	54_36p	-1	reviewed	missense	c.1202	p.I401N	1	NULL	HMMPfam_PIP5K;superfamily_SAICAR synthase-like	-	no_errors
PARG	8505	genome.wustl.edu	36	10	50757751	50757751	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	10	50757751	50757751	A	G	SNP	PARG	ENST00000402038	human	ensembl	54_36p	-1	known	silent	c.1962	p.S654	1	NULL	-	-	no_errors
ARID5B	84159	genome.wustl.edu	36	10	63486945	63486945	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	10	63486945	63486945	T	G	SNP	ARID5B	NM_032199	human	genbank	54_36p	1	validated	missense	c.910	p.S304A	0.98	NULL	-	-	no_errors
ARHGAP20	57569	genome.wustl.edu	36	11	109958322	109958322	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	Sanger_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	11	109958322	109958322	A	T	SNP	ARHGAP20	NM_020809	human	genbank	54_36p	-1	validated	missense	c.1653	p.F551L	1	NULL	-	-	no_errors
HSPB2	3316	genome.wustl.edu	36	11	111289671	111289671	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	11	111289671	111289671	C	A	SNP	HSPB2	NM_001541	human	genbank	54_36p	1	validated	silent	c.391	p.R131	1	HMMPfam_HSP20	HMMPfam_HSP20;superfamily_HSP20-like chaperones	-	no_errors
MLL	4297	genome.wustl.edu	36	11	117869054	117869054	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	11	117869054	117869054	G	C	SNP	MLL	NM_005933	human	genbank	54_36p	1	validated	missense	c.5068	p.D1690H	1	NULL	-	-	no_errors
VPS11	55823	genome.wustl.edu	36	11	118453922	118453922	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	11	118453922	118453922	G	A	SNP	VPS11	ENST00000300793	human	ensembl	54_36p	1	known	missense	c.1694	p.G565E	0.49	NULL	HMMPfam_zf-C3HC4;superfamily_WD40 repeat-like;superfamily_ARM repeat;superfamily_Protein prenylyltransferase;superfamily_RING/U-box	-	no_errors
OR4D5	219875	genome.wustl.edu	36	11	123316252	123316252	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	11	123316252	123316252	G	C	SNP	OR4D5	NM_001001965	human	genbank	54_36p	1	provisional	missense	c.719	p.C240S	1	NULL	-	-	no_errors
FSHB	2488	genome.wustl.edu	36	11	30211747	30211747	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	11	30211747	30211747	A	G	SNP	FSHB	NM_000510	human	genbank	54_36p	1	reviewed	missense	c.214	p.K72E	1	HMMPfam_Cys_knot	HMMPfam_Cys_knot,superfamily_Cystine-knot cytokines	-	no_errors
OR5T1	390155	genome.wustl.edu	36	11	55800327	55800327	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	11	55800327	55800327	T	C	SNP	OR5T1	NM_001004745	human	genbank	54_36p	1	provisional	missense	c.637	p.Y213H	0.001	NULL	-	-	no_errors
FAM111B	374393	genome.wustl.edu	36	11	58649138	58649138	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	11	58649138	58649138	G	A	SNP	FAM111B	NM_198947	human	genbank	54_36p	1	validated	missense	c.992	p.S331N		NULL	superfamily_Trypsin-like serine proteases	-	no_errors
MS4A1	931	genome.wustl.edu	36	11	59987071	59987071	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	11	59987071	59987071	G	T	SNP	MS4A1	NM_021950	human	genbank	54_36p	1	reviewed	silent	c.180	p.G60	1	HMMPfam_CD20	HMMPfam_CD20	-	no_errors
ROM1	6094	genome.wustl.edu	36	11	62137886	62137886	+	Missense_Mutation	SNP	G	G	A		Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	11	62137886	62137886	G	A	SNP	ROM1	NM_000327	human	genbank	54_36p	1	reviewed	missense	c.557	p.R186H	1	HMMPfam_Tetraspannin	HMMPfam_Tetraspannin,superfamily_Tetraspanin	-	no_errors
DNHD1	144132	genome.wustl.edu	36	11	6486753	6486753	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	11	6486753	6486753	G	C	SNP	DNHD1	NM_173589	human	genbank	54_36p	1	validated	missense	c.988	p.G330R	1	NULL	-	-	no_errors
SWAP70	23075	genome.wustl.edu	36	11	9726064	9726064	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	11	9726064	9726064	C	T	SNP	SWAP70	NM_015055	human	genbank	54_36p	1	validated	missense	c.1439	p.A480V	0.98	NULL	HMMPfam_PH;superfamily_EF-hand;superfamily_PH domain-like	-	no_errors
CLEC9A	283420	genome.wustl.edu	36	12	10098181	10098181	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	12	10098181	10098181	G	C	SNP	CLEC9A	NM_207345	human	genbank	54_36p	1	provisional	missense	c.136	p.G46R	0.053	NULL	-	-	no_errors
C12orf59	120939	genome.wustl.edu	36	12	10223492	10223492	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	12	10223492	10223492	C	T	SNP	C12orf59	NM_153022	human	genbank	54_36p	1	validated	silent	c.36	p.S12	0.95	NULL	-	-	no_errors
ALDH2	217	genome.wustl.edu	36	12	110712635	110712635	+	Silent	SNP	C	C	G	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	12	110712635	110712635	C	G	SNP	ALDH2	NM_000690	human	genbank	54_36p	1	reviewed	silent	c.567	p.L189	0.99	HMMPfam_Aldedh	HMMPfam_Aldedh;superfamily_ALDH-like	-	no_errors
OR10AD1	121275	genome.wustl.edu	36	12	46882923	46882923	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	12	46882923	46882923	C	G	SNP	OR10AD1	NM_001004134	human	genbank	54_36p	-1	provisional	missense	c.420	p.K140N	0.63	NULL	-	-	no_errors
KCNA5	3741	genome.wustl.edu	36	12	5024759	5024759	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	12	5024759	5024759	C	A	SNP	KCNA5	NM_002234	human	genbank	54_36p	1	reviewed	silent	c.1185	p.S395	1	HMMPfam_Ion_trans	HMMPfam_K_tetra;HMMPfam_Ion_trans;superfamily_POZ domain;superfamily_Voltage-gated potassium channels	-	no_errors
ANO2	57101	genome.wustl.edu	36	12	5786740	5786740	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	12	5786740	5786740	G	A	SNP	ANO2	NM_020373	human	genbank	54_36p	-1	validated	silent	c.939	p.D313	0.98	NULL	-	-	no_errors
SLC17A8	246213	genome.wustl.edu	36	12	99338033	99338033	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	12	99338033	99338033	C	A	SNP	SLC17A8	NM_139319	human	genbank	54_36p	1	validated	missense	c.1735	p.Q579K	1	NULL	HMMPfam_MFS_1;superfamily_MFS general substrate transporter	-	no_errors
ERCC5	2073	genome.wustl.edu	36	13	102326188	102326188	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	13	102326188	102326188	C	T	SNP	ERCC5	NM_000123	human	genbank	54_36p	1	reviewed	silent	c.3495	p.A1165	1	NULL	HMMPfam_XPG_N;HMMPfam_XPG_I;superfamily_5' to 3' exonuclease C-terminal subdomain;superfamily_PIN domain-like	-	no_errors
C13orf26	122046	genome.wustl.edu	36	13	30424879	30424879	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	13	30424879	30424879	A	C	SNP	C13orf26	NM_152325	human	genbank	54_36p	1	predicted	missense	c.229	p.T77P	0.07	NULL	-	-	no_errors
BRCA2	675	genome.wustl.edu	36	13	31810708	31810711	+	Frame_Shift_Del	DEL	AAAG	AAAG	-	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	AAAG	AAAG	AAAG	-	AAAG	AAAG	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	13	31810708	31810711	AAAG	-	DEL	BRCA2	NM_000059	human	genbank	54_36p	1	reviewed	frame_shift_del	c.4216_4219	p.K1406fs	0.382:0.373:0.386:0.064	NULL	superfamily_Nucleic acid-binding proteins;superfamily_BRCA2 helical domain;superfamily_BRCA2 tower domain;BRCA2;HMMPfam_BRCA2;BRCA-2_OB1;HMMPfam_BRCA-2_OB1;BRCA-2_OB3;HMMPfam_BRCA-2_OB3;Tower;HMMPfam_Tower;BRCA-2_helical;HMMPfam_BRCA-2_helical	(deletion:cds_exon[31808402;31813333])	no_errors
TRIM13	10206	genome.wustl.edu	36	13	49485278	49485278	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	13	49485278	49485278	G	T	SNP	TRIM13	NM_001007278	human	genbank	54_36p	1	reviewed	missense	c.1210	p.V404L	1	NULL	-	-	no_errors
CLN5	1203	genome.wustl.edu	36	13	76468169	76468169	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	13	76468169	76468169	C	T	SNP	CLN5	NM_006493	human	genbank	54_36p	1	reviewed	silent	c.618	p.F206	1	NULL	-	-	no_errors
MYCBP2	23077	genome.wustl.edu	36	13	76696612	76696612	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	Sanger_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	13	76696612	76696612	G	C	SNP	MYCBP2	NM_015057	human	genbank	54_36p	-1	validated	missense	c.2800	p.L934V	1	HMMPfam_RCC1	HMMPfam_RCC1;superfamily_Galactose-binding domain-like;superfamily_RCC1/BLIP-II;HMMPfam_PHR;superfamily_E set domains;superfamily_ARM repeat;superfamily_RING/U-box	-	no_errors
IRF9	10379	genome.wustl.edu	36	14	23702488	23702488	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	14	23702488	23702488	G	T	SNP	IRF9	NM_006084	human	genbank	54_36p	1	validated	missense	c.426	p.R142S	0.01	NULL	-	-	no_errors
RAB15	376267	genome.wustl.edu	36	14	64486834	64486834	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	14	64486834	64486834	C	A	SNP	RAB15	NM_198686	human	genbank	54_36p	-1	validated	missense	c.507	p.R169S	1	NULL	HMMPfam_Ras;superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
PABPC1P2	728773	genome.wustl.edu	36	2	147062571	147062571	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	2	147062571	147062571	A	C	SNP	PABPCP2	ENST00000359464	human	ensembl	54_36p	1	known	missense	c.561	p.L187F	1	NULL	-	-	no_errors
GABRA5	2558	genome.wustl.edu	36	15	24679590	24679590	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	15	24679590	24679590	A	T	SNP	GABRA5	ENST00000335625	human	ensembl	54_36p	1	known	missense	c.290	p.D97V	1	HMMPfam_Neur_chan_LBD	HMMPfam_Neur_chan_memb,HMMPfam_Neur_chan_LBD,superfamily_Neur_chan_LBD,superfamily_SSF90112	-	no_errors
UNC13C	440279	genome.wustl.edu	36	15	52094558	52094558	+	Silent	SNP	A	A	C	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	15	52094558	52094558	A	C	SNP	UNC13C	NM_001080534	human	genbank	54_36p	1	provisional	silent	c.2166	p.P722	1	NULL	-	-	no_errors
ERN2	10595	genome.wustl.edu	36	16	23619433	23619433	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	16	23619433	23619433	C	T	SNP	ERN2	NM_033266	human	genbank	54_36p	-1	validated	missense	c.1597	p.G533R	0.002	NULL	HMMPfam_Pkinase,HMMPfam_PQQ,HMMPfam_Ribonuc_2-5A,superfamily_Protein kinase-like (PK-like),superfamily_Quinoprotein alcohol dehydrogenase-like	-	no_errors
ZNF764	92595	genome.wustl.edu	36	16	30474709	30474709	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	16	30474709	30474709	G	A	SNP	ZNF764	NM_033410	human	genbank	54_36p	-1	provisional	silent	c.534	p.Y178	0.001	NULL	-	-	no_errors
EXOC3L	283849	genome.wustl.edu	36	16	65778461	65778461	+	Missense_Mutation	SNP	A	A	C		Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	16	65778461	65778461	A	C	SNP	EXOC3L	NM_178516	human	genbank	54_36p	-1	validated	missense	c.1122	p.I374M	0.504	HMMPfam_Sec6	HMMPfam_Sec6	-	no_errors
MYH4	4622	genome.wustl.edu	36	17	10291097	10291097	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	17	10291097	10291097	C	A	SNP	MYH4	NM_017533	human	genbank	54_36p	-1	validated	missense	c.5127	p.E1709D	1	HMMPfam_Myosin_tail_1	HMMPfam_IQ;HMMPfam_Myosin_head;HMMPfam_Myosin_tail_1;HMMPfam_Myosin_N;superfamily_Prefoldin;superfamily_Spectrin repeat;superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
MYH2	4620	genome.wustl.edu	36	17	10368869	10368869	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	17	10368869	10368869	T	A	SNP	MYH2	NM_001100112	human	genbank	54_36p	-1	validated	missense	c.4901	p.Q1634L	1	NULL	-	-	no_errors
CAMTA2	23125	genome.wustl.edu	36	17	4826908	4826908	+	Silent	SNP	A	A	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	17	4826908	4826908	A	T	SNP	CAMTA2	NM_015099	human	genbank	54_36p	-1	reviewed	silent	c.207	p.P69	1	HMMPfam_CG-1	HMMPfam_IQ;HMMPfam_Ank;superfamily_Ankyrin repeat;HMMPfam_TIG;HMMPfam_CG-1;superfamily_E set domains;superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
SENP3	26168	genome.wustl.edu	36	17	7409800	7409800	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	17	7409800	7409800	G	A	SNP	SENP3	ENST00000321337	human	ensembl	54_36p	1	known	missense	c.1258	p.E420K	1	NULL	-	-	no_errors
TP53	7157	genome.wustl.edu	36	17	7519217	7519217	+	Nonsense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	17	7519217	7519217	C	T	SNP	TP53	NM_000546	human	genbank	54_36p	-1	reviewed	nonsense	c.438	p.W146*	0.95	HMMPfam_P53	superfamily_p53-like transcription factors;superfamily_p53 tetramerization domain;P53_tetramer;HMMPfam_P53_tetramer;P53;HMMPfam_P53;P53_TAD;HMMPfam_P53_TAD	-	no_errors
ENPP7	339221	genome.wustl.edu	36	17	75319602	75319602	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	17	75319602	75319602	G	C	SNP	ENPP7	NM_178543	human	genbank	54_36p	1	validated	missense	c.106	p.V36L	0.78	HMMPfam_Phosphodiest	HMMPfam_Phosphodiest;superfamily_Alkaline phosphatase-like	-	no_errors
CARD14	79092	genome.wustl.edu	36	17	75783617	75783617	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	17	75783617	75783617	C	A	SNP	CARD14	NM_024110	human	genbank	54_36p	1	reviewed	silent	c.1389	p.S463	0.841	NULL	HMMPfam_CARD,superfamily_PDZ domain-like,superfamily_DEATH domain,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DNAH2	146754	genome.wustl.edu	36	17	7578653	7578653	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	17	7578653	7578653	C	G	SNP	DNAH2	NM_020877	human	genbank	54_36p	1	validated	missense	c.880	p.Q294E	1	HMMPfam_DHC_N1	HMMPfam_Dynein_heavy;HMMPfam_AAA_5;HMMPfam_DHC_N1;HMMPfam_DHC_N2;superfamily_Spectrin repeat;superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DTNA	1837	genome.wustl.edu	36	18	30652245	30652245	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	18	30652245	30652245	G	C	SNP	DTNA	NM_001390	human	genbank	54_36p	1	reviewed	missense	c.829	p.G277R	0.98	NULL	-	-	no_errors
LAMA1	284217	genome.wustl.edu	36	18	6989910	6989910	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	Sanger_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	18	6989910	6989910	C	T	SNP	LAMA1	NM_005559	human	genbank	54_36p	-1	validated	missense	c.4469	p.R1490K	1	HMMPfam_Laminin_EGF	superfamily_EGF/Laminin;HMMPfam_Laminin_B;HMMPfam_Laminin_EGF;HMMPfam_Laminin_N;superfamily_Galactose-binding domain-like;superfamily_Concanavalin A-like lectins/glucanases;HMMPfam_Laminin_I;HMMPfam_Laminin_II;HMMPfam_Laminin_G_1;HMMPfam_Laminin_G_2;superfamily_Spectrin repeat	-	no_errors
LAMA1	284217	genome.wustl.edu	36	18	7005726	7005726	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	18	7005726	7005726	A	T	SNP	LAMA1	NM_005559	human	genbank	54_36p	-1	validated	missense	c.3121	p.C1041S	1	HMMPfam_Laminin_EGF	superfamily_EGF/Laminin;HMMPfam_Laminin_B;HMMPfam_Laminin_EGF;HMMPfam_Laminin_N;superfamily_Galactose-binding domain-like;superfamily_Concanavalin A-like lectins/glucanases;HMMPfam_Laminin_I;HMMPfam_Laminin_II;HMMPfam_Laminin_G_1;HMMPfam_Laminin_G_2;superfamily_Spectrin repeat	-	no_errors
LOC100132918	100132918	genome.wustl.edu	36	3	183661550	183661550	+	RNA	SNP	G	G	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	3	183661550	183661550	G	A	SNP	LOC100132918	XR_042313	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.08	-	-	-	pseudogene
TMED1	11018	genome.wustl.edu	36	19	10806651	10806651	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	19	10806651	10806651	C	T	SNP	TMED1	NM_006858	human	genbank	54_36p	-1	reviewed	missense	c.424	p.E142K	1	NULL	HMMPfam_EMP24_GP25L,superfamily_Supernatant protein factor (SPF) C-terminal domain	-	no_errors
MLL4	9757	genome.wustl.edu	36	19	40915407	40915407	+	Nonstop_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	19	40915407	40915407	G	T	SNP	MLL4	NM_014727	human	genbank	54_36p	1	reviewed	nonstop	c.6116	p.*2039L	1	NULL	AT_hook,HMMPfam_AT_hook,SET,HMMPfam_SET,PHD,HMMPfam_PHD,zf-CXXC,HMMPfam_zf-CXXC,FYRN,HMMPfam_FYRN,FYRC,HMMPfam_FYRC	-	pseudogene:no_stop_codon:bad_bp_length_for_coding_region
BCL3	602	genome.wustl.edu	36	19	49951375	49951375	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	19	49951375	49951375	C	T	SNP	BCL3	NM_005178	human	genbank	54_36p	1	reviewed	missense	c.433	p.R145W	0.08	NULL	-	-	no_errors
CCDC8	83987	genome.wustl.edu	36	19	51607719	51607719	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	19	51607719	51607719	G	A	SNP	CCDC8	NM_032040	human	genbank	54_36p	-1	validated	silent	c.189	p.T63	1	NULL	-	-	no_errors
DHX34	9704	genome.wustl.edu	36	19	52548654	52548654	+	Missense_Mutation	SNP	A	A	C		Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	19	52548654	52548654	A	C	SNP	DHX34	NM_014681	human	genbank	54_36p	1	reviewed	missense	c.527	p.K176T	0.002	NULL	HMMPfam_Helicase_C,HMMPfam_HA2,HMMPfam_DUF1605,superfamily_P-loop containing nucleoside triphosphate hydrolases,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
SULT2A1	6822	genome.wustl.edu	36	19	53078738	53078738	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	19	53078738	53078738	T	C	SNP	SULT2A1	NM_003167	human	genbank	54_36p	-1	validated	missense	c.253	p.T85A		HMMPfam_Sulfotransfer_1	HMMPfam_Sulfotransfer_1;superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
SLC6A16	28968	genome.wustl.edu	36	19	54504404	54504404	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	19	54504404	54504404	G	A	SNP	SLC6A16	NM_014037	human	genbank	54_36p	-1	validated	missense	c.953	p.A318V	0.01	NULL	-	-	no_errors
HAS1	3036	genome.wustl.edu	36	19	56911381	56911381	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	19	56911381	56911381	C	T	SNP	HAS1	NM_001523	human	genbank	54_36p	-1	reviewed	missense	c.1001	p.C334Y	1	NULL	HMMPfam_Glycos_transf_2;superfamily_Nucleotide-diphospho-sugar transferases	-	no_errors
LAIR1	3903	genome.wustl.edu	36	19	59559781	59559786	+	In_Frame_Del	DEL	GCTGTG	GCTGTG	-	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	GCTGTG	GCTGTG	GCTGTG	-	GCTGTG	GCTGTG	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	19	59559781	59559786	GCTGTG	-	DEL	LAIR1	NM_002287	human	genbank	54_36p	-1	reviewed	in_frame_del	c.622_617	p.PQ206in_frame_del	0.897:0.870:0.822:0.576:0.003:0.000	NULL	superfamily_Immunoglobulin	(deletion:cds_exon[59559777;59559819])	no_errors
DPP10	57628	genome.wustl.edu	36	2	116236628	116236628	+	Missense_Mutation	SNP	T	T	C		Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	2	116236628	116236628	T	C	SNP	DPP10	NM_020868	human	genbank	54_36p	1	reviewed	missense	c.1085	p.M362T	0.998	NULL	-	-	no_errors
GRB14	2888	genome.wustl.edu	36	2	165057926	165057926	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	2	165057926	165057926	C	A	SNP	GRB14	NM_004490	human	genbank	54_36p	-1	reviewed	missense	c.1489	p.G497C	1	HMMPfam_SH2	RA;HMMPfam_RA;SH2;HMMPfam_SH2;PH;HMMPfam_PH;BPS;HMMPfam_BPS	-	no_errors
TTN	7273	genome.wustl.edu	36	2	179115333	179115333	+	Silent	SNP	C	C	T	rs55915651	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	2	179115333	179115333	C	T	SNP	TTN	NM_133378	human	genbank	54_36p	-1	reviewed	silent	c.89691	p.P29897	1	NULL	-	-	pseudogene:no_stop_codon:bad_bp_length_for_coding_region
TTN	7273	genome.wustl.edu	36	2	179348920	179348920	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	2	179348920	179348920	T	A	SNP	TTN	NM_133378	human	genbank	54_36p	-1	reviewed	missense	c.5916	p.E1972D	0.98	NULL	-	-	pseudogene:no_stop_codon:bad_bp_length_for_coding_region
KCNK3	3777	genome.wustl.edu	36	2	26804447	26804447	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	2	26804447	26804447	G	T	SNP	KCNK3	NM_002246	human	genbank	54_36p	1	reviewed	missense	c.692	p.G231V	1	HMMPfam_Ion_trans_2	HMMPfam_Ion_trans_2,superfamily_Voltage-gated potassium channels	-	no_errors
ERLEC1	27248	genome.wustl.edu	36	2	53882353	53882353	+	Splice_Site	SNP	G	G	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	2	53882353	53882353	G	A	SNP	C2orf30	NM_015701	human	genbank	54_36p	1	validated	splice_site	c.750-1	e8-1	1	-	-	-	no_errors
ADRA2B	151	genome.wustl.edu	36	2	96145154	96145154	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	2	96145154	96145154	C	A	SNP	ADRA2B	NM_000682	human	genbank	54_36p	-1	reviewed	missense	c.462	p.Q154H	0.19	NULL	-	-	no_errors
MRPL30	51263	genome.wustl.edu	36	2	99178516	99178516	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	2	99178516	99178516	G	T	SNP	MRPL30	NM_145212	human	genbank	54_36p	1	reviewed	missense	c.402	p.M134I	1	NULL	-	-	no_errors
AFF3	3899	genome.wustl.edu	36	2	99541778	99541778	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	2	99541778	99541778	G	A	SNP	AFF3	NM_001025108	human	genbank	54_36p	-1	reviewed	silent	c.3351	p.D1117	1	HMMPfam_AF-4	HMMPfam_AF-4	-	no_errors
CSRP2BP	57325	genome.wustl.edu	36	20	18090728	18090728	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	20	18090728	18090728	G	C	SNP	CSRP2BP	NM_020536	human	genbank	54_36p	1	reviewed	missense	c.947	p.S316T	1	NULL	HMMPfam_Acetyltransf_1;superfamily_Six-hairpin glycosidases;superfamily_Acyl-CoA N-acyltransferases (Nat)	-	no_errors
DEFB115	245929	genome.wustl.edu	36	20	29309134	29309134	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	20	29309134	29309134	C	A	SNP	DEFB115	NM_001037730	human	genbank	54_36p	1	provisional	missense	c.7	p.P3T	0.01	NULL	-	-	no_errors
HCK	3055	genome.wustl.edu	36	20	30145462	30145462	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	20	30145462	30145462	G	A	SNP	HCK	NM_002110	human	genbank	54_36p	1	reviewed	missense	c.1228	p.E410K	1	HMMPfam_Pkinase_Tyr	SH2;HMMPfam_SH2;Pkinase_Tyr;HMMPfam_Pkinase_Tyr;SH3_1;HMMPfam_SH3_1	-	no_errors
C20orf185	359710	genome.wustl.edu	36	20	31110938	31110938	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	20	31110938	31110938	G	A	SNP	C20orf185	NM_182658	human	genbank	54_36p	1	provisional	missense	c.375	p.M125I	1	NULL	-	-	no_errors
C20orf185	359710	genome.wustl.edu	36	20	31120375	31120375	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	20	31120375	31120375	G	A	SNP	C20orf185	NM_182658	human	genbank	54_36p	1	provisional	missense	c.1084	p.A362T	0.44	NULL	-	-	no_errors
BPI	671	genome.wustl.edu	36	20	36366093	36366093	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	20	36366093	36366093	C	T	SNP	BPI	NM_001725	human	genbank	54_36p	1	reviewed	silent	c.66	p.V22	0.17	NULL	-	-	no_errors
STAU1	6780	genome.wustl.edu	36	20	47185799	47185799	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	20	47185799	47185799	C	T	SNP	STAU1	NM_017453	human	genbank	54_36p	-1	reviewed	missense	c.587	p.R196Q	1	NULL	-	-	no_errors
TSHZ2	128553	genome.wustl.edu	36	20	51305318	51305318	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	20	51305318	51305318	A	C	SNP	TSHZ2	NM_173485	human	genbank	54_36p	1	validated	missense	c.1914	p.E638D	0.28	NULL	-	-	no_errors
USP25	29761	genome.wustl.edu	36	21	16164305	16164305	+	Silent	SNP	C	C	G		Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	21	16164305	16164305	C	G	SNP	USP25	NM_013396	human	genbank	54_36p	1	validated	silent	c.2643	p.L881	0.998	NULL	HMMPfam_UBA,HMMPfam_UCH,HMMPfam_UIM,superfamily_UBA-like,superfamily_Cysteine proteinases	-	no_errors
DERL3	91319	genome.wustl.edu	36	22	22509304	22509304	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	22	22509304	22509304	G	A	SNP	DERL3	NM_001002862	human	genbank	54_36p	-1	reviewed	silent	c.561	p.D187	0.99	HMMPfam_DER1	HMMPfam_DER1	-	no_errors
UPB1	51733	genome.wustl.edu	36	22	23239450	23239450	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	22	23239450	23239450	C	T	SNP	UPB1	NM_016327	human	genbank	54_36p	1	reviewed	silent	c.618	p.N206	0.99	HMMPfam_CN_hydrolase	HMMPfam_CN_hydrolase;superfamily_Carbon-nitrogen hydrolase	-	no_errors
SNRPD3	6634	genome.wustl.edu	36	22	23283654	23283654	+	Silent	SNP	T	T	C	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	22	23283654	23283654	T	C	SNP	SNRPD3	NM_004175	human	genbank	54_36p	1	reviewed	silent	c.12	p.G4	1	NULL	-	-	no_errors
DCBLD2	131566	genome.wustl.edu	36	3	100051033	100051033	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	3	100051033	100051033	C	A	SNP	DCBLD2	NM_080927	human	genbank	54_36p	-1	validated	missense	c.533	p.R178L	1	HMMPfam_CUB	HMMPfam_F5_F8_type_C;HMMPfam_CUB;superfamily_Spermadhesin CUB domain;HMMPfam_LCCL;superfamily_Galactose-binding domain-like;superfamily_LCCL domain	-	no_errors
ZBTB38	253461	genome.wustl.edu	36	3	142645875	142645875	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	3	142645875	142645875	G	A	SNP	ZBTB38	NM_001080412	human	genbank	54_36p	1	validated	missense	c.1955	p.G652D		NULL	-	-	no_errors
TRA2B	6434	genome.wustl.edu	36	3	187126095	187126095	+	Missense_Mutation	SNP	T	T	C		Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	3	187126095	187126095	T	C	SNP	TRA2B	NM_004593	human	genbank	54_36p	-1	validated	missense	c.184	p.R62G	1	NULL	-	-	no_errors
HHATL	57467	genome.wustl.edu	36	3	42709260	42709260	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	3	42709260	42709260	T	C	SNP	HHATL	NM_020707	human	genbank	54_36p	-1	provisional	missense	c.1502	p.E501G	1	NULL	HMMPfam_MBOAT	-	no_errors
RBM6	10180	genome.wustl.edu	36	3	49980091	49980091	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	3	49980091	49980091	G	T	SNP	RBM6	NM_005777	human	genbank	54_36p	1	provisional	missense	c.229	p.A77S	1	NULL	HMMPfam_G-patch;superfamily_RNA-binding domain RBD;superfamily_C2H2 and C2HC zinc fingers;superfamily_NZF domain	-	no_errors
GNAI2	2771	genome.wustl.edu	36	3	50265496	50265496	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	3	50265496	50265496	G	A	SNP	GNAI2	NM_002070	human	genbank	54_36p	1	validated	missense	c.340	p.A114T	1	HMMPfam_G-alpha	HMMPfam_G-alpha;superfamily_Transducin (alpha subunit) insertion domain;superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ADAMTS9	56999	genome.wustl.edu	36	3	64581896	64581896	+	Missense_Mutation	SNP	T	G	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	T	T	G	T	T	T	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA		dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	3	64581896	64581896	T	G	SNP	ADAMTS9	NM_182920	human	genbank	54_36p	-1	reviewed	missense	c.2747	p.Q916P	1	NULL	"HMMPfam_TSP_1;HMMPfam_Reprolysin;HMMPfam_Pep_M12B_propep;HMMPfam_ADAM_spacer1;HMMPfam_GON;superfamily_Metalloproteases (""zincins"") catalytic domain;superfamily_TSP-1 type 1 repeat"	-	no_errors
THUMPD3	25917	genome.wustl.edu	36	3	9387893	9387893	+	Silent	SNP	T	T	C	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	3	9387893	9387893	T	C	SNP	THUMPD3	NM_015453	human	genbank	54_36p	1	validated	silent	c.480	p.N160	0.067	NULL	-	-	no_errors
ANK2	287	genome.wustl.edu	36	4	114434045	114434045	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	4	114434045	114434045	A	T	SNP	ANK2	NM_001148	human	genbank	54_36p	1	reviewed	missense	c.2377	p.N793Y	1	HMMPfam_Ank	HMMPfam_Death;HMMPfam_ZU5;HMMPfam_Ank;superfamily_Ankyrin repeat;superfamily_DEATH domain	-	no_errors
C4orf42	92070	genome.wustl.edu	36	4	1234461	1234461	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	4	1234461	1234461	A	T	SNP	C4orf42	NM_052861	human	genbank	54_36p	1	validated	missense	c.100	p.R34W	0.007	NULL	-	-	no_errors
UCP1	7350	genome.wustl.edu	36	4	141700559	141700559	+	Missense_Mutation	SNP	A	A	G		Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	4	141700559	141700559	A	G	SNP	UCP1	NM_021833	human	genbank	54_36p	-1	reviewed	missense	c.865	p.F289L	1	NULL	-	-	no_errors
ZNF718	255403	genome.wustl.edu	36	4	145370	145370	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	4	145370	145370	A	C	SNP	ZNF718	ENST00000400172	human	ensembl	54_36p	1	known	missense	c.234	p.L78F		NULL	-	-	no_errors
LOC90826	90826	genome.wustl.edu	36	4	148814343	148814343	+	Silent	SNP	A	A	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	4	148814343	148814343	A	T	SNP	LOC90826	NM_138364	human	genbank	54_36p	-1	predicted	silent	c.471	p.L157	0.99	NULL	-	-	no_errors
LOC391722	391722	genome.wustl.edu	36	4	185457678	185457678	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	4	185457678	185457678	G	C	SNP	LOC391722	XM_373042	human	genbank	54_36p	-1	model	missense	c.732	p.N244K	1	NULL	-	-	no_errors
SCFD2	152579	genome.wustl.edu	36	4	53926396	53926396	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	4	53926396	53926396	G	A	SNP	SCFD2	NM_152540	human	genbank	54_36p	-1	validated	missense	c.470	p.P157L	1	NULL	-	-	no_errors
LPHN3	23284	genome.wustl.edu	36	4	62483220	62483220	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	4	62483220	62483220	C	G	SNP	LPHN3	NM_015236	human	genbank	54_36p	1	reviewed	missense	c.1976	p.T659R	0.53	NULL	-	-	no_errors
PARM1	25849	genome.wustl.edu	36	4	76156925	76156925	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	4	76156925	76156925	C	G	SNP	DKFZP564O0823	NM_015393	human	genbank	54_36p	1	validated	missense	c.310	p.P104A	0.01	NULL	-	-	no_errors
ENSG00000186223	0	genome.wustl.edu	36	11	4220394	4220394	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	11	4220394	4220394	C	A	SNP	ENSG00000186223	ENST00000334071	human	ensembl	54_36p	-1	known	missense	c.53	p.R18M	1	NULL	superfamily_Phosphotyrosine protein phosphatases I;HMMPfam_Ssu72	-	no_errors
FBN2	2201	genome.wustl.edu	36	5	127698789	127698789	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	5	127698789	127698789	C	T	SNP	FBN2	NM_001999	human	genbank	54_36p	-1	reviewed	missense	c.3945	p.M1315I	1	HMMPfam_EGF_CA	HMMPfam_EGF_CA;superfamily_Cadherin-like;superfamily_EGF/Laminin;superfamily_TB module/8-cys domain;HMMPfam_TB;HMMPfam_EGF;superfamily_Concanavalin A-like lectins/glucanases;superfamily_Growth factor receptor domain	-	no_errors
DNAH5	1767	genome.wustl.edu	36	5	13822720	13822720	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	5	13822720	13822720	T	G	SNP	DNAH5	NM_001369	human	genbank	54_36p	-1	validated	missense	c.9610	p.N3204H	1	NULL	-	-	no_errors
TIGD6	81789	genome.wustl.edu	36	5	149354791	149354791	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	5	149354791	149354791	G	A	SNP	TIGD6	NM_030953	human	genbank	54_36p	-1	validated	silent	c.1314	p.D438	0.03	NULL	-	-	no_errors
MAML1	9794	genome.wustl.edu	36	5	179125186	179125186	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	5	179125186	179125186	G	A	SNP	MAML1	NM_014757	human	genbank	54_36p	1	reviewed	missense	c.569	p.R190H	1	NULL	-	-	no_errors
CDH10	1008	genome.wustl.edu	36	5	24629198	24629198	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	5	24629198	24629198	T	A	SNP	CDH10	NM_006727	human	genbank	54_36p	-1	reviewed	missense	c.159	p.K53N	1	NULL	HMMPfam_Cadherin_C;HMMPfam_Cadherin;superfamily_Cadherin-like	-	no_errors
AGXT2	64902	genome.wustl.edu	36	5	35083713	35083713	+	Silent	SNP	C	C	G	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	5	35083713	35083713	C	G	SNP	AGXT2	NM_031900	human	genbank	54_36p	-1	reviewed	silent	c.42	p.L14		NULL	HMMPfam_Aminotran_3;superfamily_PLP-dependent transferases	-	no_errors
IL7R	3575	genome.wustl.edu	36	5	35912193	35912193	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	5	35912193	35912193	A	G	SNP	IL7R	NM_002185	human	genbank	54_36p	1	reviewed	missense	c.1228	p.T410A		NULL	fn3;HMMPfam_fn3	-	no_errors
RNF138P1	379013	genome.wustl.edu	36	5	54862119	54862119	+	RNA	SNP	G	G	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	5	54862119	54862119	G	A	SNP	RNF138P1	NR_001575	human	genbank	54_36p	-1	provisional	rna	NULL	NULL	1	-	-	-	pseudogene
SREK1IP1	285672	genome.wustl.edu	36	5	64072705	64072705	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	5	64072705	64072705	G	C	SNP	SFRS12IP1	NM_173829	human	genbank	54_36p	-1	validated	missense	c.140	p.T47R	1	NULL	-	-	no_errors
IQGAP2	10788	genome.wustl.edu	36	5	75968737	75968737	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	5	75968737	75968737	C	A	SNP	IQGAP2	NM_006633	human	genbank	54_36p	1	validated	missense	c.1903	p.L635I	0.997	NULL	-	-	no_errors
MIR298	100126296	genome.wustl.edu	36	20	56826717	56826717	+	RNA	SNP	C	C	G	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	20	56826717	56826717	C	G	SNP	MIRN298	ENST00000401212	human	ensembl	54_36p	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors
CAP2	10486	genome.wustl.edu	36	6	17651147	17651147	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	6	17651147	17651147	G	T	SNP	CAP2	NM_006366	human	genbank	54_36p	1	reviewed	missense	c.1103	p.G368V	1	HMMPfam_CAP_C	HMMPfam_CAP_C;superfamily_C-terminal domain of adenylylcyclase associated protein;HMMPfam_CAP_N;superfamily_N-terminal domain of adenylylcyclase associated protein CAP	-	no_errors
GRM4	2914	genome.wustl.edu	36	6	34104094	34104094	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	6	34104094	34104094	C	A	SNP	GRM4	NM_000841	human	genbank	54_36p	-1	reviewed	missense	c.2470	p.V824F	1	HMMPfam_7tm_3	HMMPfam_7tm_3;HMMPfam_ANF_receptor;HMMPfam_NCD3G;superfamily_MFS general substrate transporter;superfamily_Periplasmic binding protein-like I;superfamily_TNF receptor-like	-	no_errors
PEX6	5190	genome.wustl.edu	36	6	43042245	43042245	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	6	43042245	43042245	G	A	SNP	PEX6	NM_000287	human	genbank	54_36p	-1	reviewed	missense	c.2090	p.P697L	1	NULL	HMMPfam_AAA;superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
HCRTR2	3062	genome.wustl.edu	36	6	55228105	55228105	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	6	55228105	55228105	C	A	SNP	HCRTR2	NM_001526	human	genbank	54_36p	1	reviewed	silent	c.615	p.T205	1	NULL	-	-	no_errors
DST	667	genome.wustl.edu	36	6	56465184	56465184	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	6	56465184	56465184	C	T	SNP	DST	NM_183380	human	genbank	54_36p	-1	reviewed	missense	c.13666	p.A4556T	1	NULL	-	-	no_errors
KCNQ5	56479	genome.wustl.edu	36	6	73961051	73961051	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	6	73961051	73961051	A	T	SNP	KCNQ5	NM_019842	human	genbank	54_36p	1	reviewed	missense	c.1992	p.K664N	1	NULL	HMMPfam_Ion_trans;HMMPfam_KCNQ_channel;superfamily_Voltage-gated potassium channels	-	no_errors
CD109	135228	genome.wustl.edu	36	6	74574673	74574673	+	Silent	SNP	T	T	G	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	6	74574673	74574673	T	G	SNP	CD109	NM_133493	human	genbank	54_36p	1	validated	silent	c.3336	p.T1112		HMMPfam_A2M_comp	HMMPfam_A2M;HMMPfam_A2M_N;superfamily_Terpenoid cyclases/Protein prenyltransferases;HMMPfam_A2M_recep;superfamily_Alpha-macroglobulin receptor domain;HMMPfam_A2M_N_2;HMMPfam_A2M_comp	-	no_errors
ZAN	7455	genome.wustl.edu	36	7	100190916	100190916	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	7	100190916	100190916	C	A	SNP	ZAN	ENST00000349350	human	ensembl	54_36p	1	known	missense	c.3256	p.H1086N		NULL	-	-	no_errors
MUC17	140453	genome.wustl.edu	36	7	100468311	100468311	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	7	100468311	100468311	C	A	SNP	MUC17	NM_001040105	human	genbank	54_36p	1	provisional	silent	c.6894	p.T2298		NULL	HMMPfam_SEA;superfamily_EGF/Laminin;superfamily_SEA domain	-	no_errors
TMEM209	84928	genome.wustl.edu	36	7	129602659	129602659	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	7	129602659	129602659	A	T	SNP	TMEM209	NM_032842	human	genbank	54_36p	-1	validated	missense	c.1273	p.S425T	1	NULL	-	-	no_errors
C7orf49	78996	genome.wustl.edu	36	7	134502124	134502124	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	7	134502124	134502124	C	A	SNP	C7orf49	NM_024033	human	genbank	54_36p	-1	validated	missense	c.169	p.A57S	0.01	NULL	-	-	no_errors
PIP	5304	genome.wustl.edu	36	7	142546374	142546374	+	Missense_Mutation	SNP	A	A	G		Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	7	142546374	142546374	A	G	SNP	PIP	NM_002652	human	genbank	54_36p	1	validated	missense	c.286	p.K96E	0	NULL	-	-	no_errors
SMARCD3	6604	genome.wustl.edu	36	7	150569567	150569567	+	Missense_Mutation	SNP	T	T	A		Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	7	150569567	150569567	T	A	SNP	SMARCD3	NM_001003801	human	genbank	54_36p	-1	reviewed	missense	c.883	p.R295W	1	NULL	-	-	no_errors
DNAJB6	10049	genome.wustl.edu	36	7	156871070	156871070	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	7	156871070	156871070	A	T	SNP	DNAJB6	NM_005494	human	genbank	54_36p	1	reviewed	missense	c.695	p.K232M	1	NULL	-	-	no_errors
CCDC129	223075	genome.wustl.edu	36	7	31584509	31584509	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	7	31584509	31584509	C	G	SNP	CCDC129	NM_194300	human	genbank	54_36p	1	validated	missense	c.1106	p.T369S	0.005	NULL	-	-	no_errors
POLD2	5425	genome.wustl.edu	36	7	44122263	44122263	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	7	44122263	44122263	T	C	SNP	POLD2	NM_006230	human	genbank	54_36p	-1	validated	missense	c.995	p.Y332C	1	HMMPfam_DNA_pol_E_B	HMMPfam_DNA_pol_E_B	-	no_errors
CYP3A7	1551	genome.wustl.edu	36	7	99152771	99152771	+	Silent	SNP	C	C	T		Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	7	99152771	99152771	C	T	SNP	CYP3A7	NM_000765	human	genbank	54_36p	-1	reviewed	silent	c.486	p.R162	0.001	NULL	-	-	no_errors
VPS13B	157680	genome.wustl.edu	36	8	100548939	100548939	+	Silent	SNP	T	T	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	8	100548939	100548939	T	A	SNP	VPS13B	NM_017890	human	genbank	54_36p	1	reviewed	silent	c.3567	p.S1189	1	NULL	-	-	no_errors
NACAP1	83955	genome.wustl.edu	36	8	102450494	102450494	+	RNA	SNP	G	G	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	8	102450494	102450494	G	A	SNP	NACAP1	NR_002182	human	genbank	54_36p	1	provisional	rna	NULL	NULL	1	-	-	-	pseudogene
NACAP1	83955	genome.wustl.edu	36	8	102450697	102450697	+	RNA	SNP	G	G	C	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	8	102450697	102450697	G	C	SNP	NACAP1	NR_002182	human	genbank	54_36p	1	provisional	rna	NULL	NULL	1	-	-	-	pseudogene
ODF1	4956	genome.wustl.edu	36	8	103633145	103633145	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	8	103633145	103633145	G	C	SNP	ODF1	NM_024410	human	genbank	54_36p	1	reviewed	missense	c.14	p.S5T	1	NULL	superfamily_HSP20-like chaperones	-	no_errors
RP1L1	94137	genome.wustl.edu	36	8	10518051	10518051	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	8	10518051	10518051	G	T	SNP	RP1L1	NM_178857	human	genbank	54_36p	-1	validated	missense	c.71	p.T24N		NULL	HMMPfam_DCX;HMMPfam_S-antigen;superfamily_Doublecortin (DC)	-	no_errors
COL22A1	169044	genome.wustl.edu	36	8	139806843	139806843	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	8	139806843	139806843	A	G	SNP	COL22A1	NM_152888	human	genbank	54_36p	-1	validated	missense	c.2162	p.V721A	0.13	HMMPfam_Collagen	HMMPfam_VWA;HMMPfam_Collagen;superfamily_Concanavalin A-like lectins/glucanases;superfamily_vWA-like	-	no_errors
UNC5D	137970	genome.wustl.edu	36	8	35660770	35660770	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	8	35660770	35660770	C	A	SNP	UNC5D	NM_080872	human	genbank	54_36p	1	validated	missense	c.719	p.A240D	1	NULL	-	-	no_errors
RB1CC1	9821	genome.wustl.edu	36	8	53732895	53732895	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	8	53732895	53732895	C	T	SNP	RB1CC1	NM_014781	human	genbank	54_36p	-1	validated	missense	c.2047	p.A683T	0.99	NULL	superfamily_Prefoldin;superfamily_Ubiquitin-like	-	no_errors
SDR16C5	195814	genome.wustl.edu	36	8	57391337	57391337	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	8	57391337	57391337	T	G	SNP	SDR16C5	NM_138969	human	genbank	54_36p	-1	validated	missense	c.124	p.I42L	0.99	NULL	-	-	no_errors
CDK5RAP2	55755	genome.wustl.edu	36	9	122273886	122273886	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	9	122273886	122273886	T	A	SNP	CDK5RAP2	NM_018249	human	genbank	54_36p	-1	reviewed	missense	c.1819	p.T607S	0.306	NULL	HMMPfam_Microtub_assoc	-	no_errors
RABGAP1	23637	genome.wustl.edu	36	9	124791454	124791454	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	9	124791454	124791454	C	T	SNP	RABGAP1	NM_012197	human	genbank	54_36p	1	validated	silent	c.432	p.L144	1	NULL	-	-	no_errors
FREM1	158326	genome.wustl.edu	36	9	14740192	14740192	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	9	14740192	14740192	G	C	SNP	FREM1	NM_144966	human	genbank	54_36p	-1	validated	missense	c.5490	p.N1830K	1	NULL	-	-	no_errors
NOL6	65083	genome.wustl.edu	36	9	33456931	33456931	+	Silent	SNP	T	T	C	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	9	33456931	33456931	T	C	SNP	NOL6	NM_022917	human	genbank	54_36p	-1	reviewed	silent	c.1929	p.A643		NULL	-	-	no_errors
ALDH1A1	216	genome.wustl.edu	36	9	74716766	74716766	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	9	74716766	74716766	C	T	SNP	ALDH1A1	NM_000689	human	genbank	54_36p	-1	reviewed	silent	c.1128	p.G376	0.99	HMMPfam_Aldedh	HMMPfam_Aldedh;superfamily_ALDH-like	-	no_errors
LOC100132553	100132553	genome.wustl.edu	36	8	92239546	92239546	+	RNA	SNP	A	A	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	8	92239546	92239546	A	T	SNP	LOC100132553	XR_038881	human	genbank	54_36p	1	model	rna	NULL	NULL	0.92	-	-	-	pseudogene
uc001dse.1	0	genome.wustl.edu	36	1	99537168	99537168	+	Silent	SNP	T	T	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	1	99537168	99537168	T	A	SNP	uc001dse.1	ENST00000370184	human	ensembl	54_36p	1	known	silent	c.54	p.I18	0.01	NULL	-	-	no_errors
BHLHB9	80823	genome.wustl.edu	36	X	101890757	101890757	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	X	101890757	101890757	G	A	SNP	BHLHB9	NM_030639	human	genbank	54_36p	1	validated	missense	c.178	p.A60T		NULL	-	-	no_errors
MSL3	10943	genome.wustl.edu	36	X	11691827	11691827	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	X	11691827	11691827	C	T	SNP	MSL3	NM_078629	human	genbank	54_36p	1	reviewed	missense	c.757	p.L253F	1	NULL	-	-	no_errors
BRS3	680	genome.wustl.edu	36	X	135400215	135400215	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	X	135400215	135400215	C	G	SNP	BRS3	NM_001727	human	genbank	54_36p	1	validated	missense	c.692	p.S231C	0.7	HMMPfam_7tm_1	HMMPfam_7tm_1;superfamily_Family A G protein-coupled receptor-like	-	no_errors
HTATSF1	27336	genome.wustl.edu	36	X	135407517	135407517	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	X	135407517	135407517	G	C	SNP	HTATSF1	NM_014500	human	genbank	54_36p	1	provisional	missense	c.8	p.G3A	0.634	NULL	HMMPfam_RRM_1,superfamily_RNA-binding domain RBD	-	no_errors
CSF2RA	1438	genome.wustl.edu	36	X	1367745	1367745	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	Sanger_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	X	1367745	1367745	G	A	SNP	CSF2RA	NM_006140	human	genbank	54_36p	1	reviewed	missense	c.437	p.R146H	0	NULL	superfamily_Fibronectin type III	-	no_errors
MAGEA1	4100	genome.wustl.edu	36	X	152135372	152135372	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	X	152135372	152135372	T	A	SNP	MAGEA1	NM_004988	human	genbank	54_36p	-1	reviewed	missense	c.833	p.K278I		HMMPfam_MAGE	"HMMPfam_MAGE;superfamily_""Winged helix"" DNA-binding domain"	-	no_errors
MAP7D2	256714	genome.wustl.edu	36	X	19938877	19938877	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	X	19938877	19938877	G	A	SNP	MAP7D2	NM_152780	human	genbank	54_36p	-1	provisional	missense	c.2164	p.P722S	1	NULL	HMMPfam_MAP7	-	no_errors
KLHL15	80311	genome.wustl.edu	36	X	23916065	23916065	+	Nonsense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	X	23916065	23916065	C	T	SNP	KLHL15	NM_030624	human	genbank	54_36p	-1	provisional	nonsense	c.1709	p.W570*	1	NULL	-	-	no_errors
CCNB3	85417	genome.wustl.edu	36	X	50069949	50069949	+	Silent	SNP	T	T	A	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	X	50069949	50069949	T	A	SNP	CCNB3	NM_033031	human	genbank	54_36p	1	reviewed	silent	c.2040	p.V680		NULL	Cyclin_C;HMMPfam_Cyclin_C;Cyclin_N;HMMPfam_Cyclin_N	-	no_errors
HUWE1	10075	genome.wustl.edu	36	X	53594636	53594636	+	Silent	SNP	C	C	G	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	X	53594636	53594636	C	G	SNP	HUWE1	NM_031407	human	genbank	54_36p	-1	validated	silent	c.9336	p.L3112	0.91	NULL	HMMPfam_WWE;superfamily_UBA-like;HMMPfam_DUF908;HMMPfam_DUF913;superfamily_Hypothetical protein MTH677;superfamily_ARM repeat;superfamily_Hect E3 ligase catalytic domain;HMMPfam_UBA;HMMPfam_HECT	-	no_errors
WNK3	65267	genome.wustl.edu	36	X	54336306	54336306	+	Missense_Mutation	SNP	G	G	C		Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	X	54336306	54336306	G	C	SNP	WNK3	NM_020922	human	genbank	54_36p	-1	validated	missense	c.1873	p.Q625E	1	NULL	HMMPfam_Pkinase,superfamily_Protein kinase-like (PK-like)	-	no_errors
FGD1	2245	genome.wustl.edu	36	X	54489431	54489431	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0885-01A-02W-0421-09	TCGA-13-0885-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	a530d9a9-b21e-47be-b4d8-1707b71f360a	66bc2509-0fe0-4a29-9433-b2cf5b7ea9ad	X	54489431	54489431	G	C	SNP	FGD1	NM_004463	human	genbank	54_36p	-1	reviewed	missense	c.2722	p.L908V	1	NULL	-	-	no_errors
