Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
EYA3	2140	broad.mit.edu	36	1	28187735	28187735	+	Missense_Mutation	SNP	G	G	C	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
SPOCD1	90853	broad.mit.edu	36	1	32052195	32052195	+	Missense_Mutation	SNP	C	C	G	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
CSMD2	114784	broad.mit.edu	36	1	33901272	33901272	+	Missense_Mutation	SNP	A	A	T	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	A	A	T	T	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
EIF2C4	192670	broad.mit.edu	36	1	36064236	36064236	+	Missense_Mutation	SNP	A	A	G	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	A	A	G	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
PALMD	54873	broad.mit.edu	36	1	99927002	99927002	+	Missense_Mutation	SNP	G	G	C	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
SLC16A4	9122	broad.mit.edu	36	1	110723108	110723108	+	Missense_Mutation	SNP	G	G	C	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
RHOC	389	broad.mit.edu	36	1	113047244	113047244	+	Missense_Mutation	SNP	G	G	T	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
CCT3	7203	broad.mit.edu	36	1	154555309	154555309	+	Missense_Mutation	SNP	G	G	C	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
CD1C	911	broad.mit.edu	36	1	156526512	156526512	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
CD84	8832	broad.mit.edu	36	1	158801956	158801956	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
CD244	51744	broad.mit.edu	36	1	159074894	159074894	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
MPZ	4359	broad.mit.edu	36	1	159542864	159542864	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
FCGR2A	2212	broad.mit.edu	36	1	159747303	159747303	+	Silent	SNP	G	G	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
PFKFB2	5208	broad.mit.edu	36	1	205303127	205303127	+	Missense_Mutation	SNP	G	G	T	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
USH2A	7399	broad.mit.edu	36	1	214564266	214564266	+	Missense_Mutation	SNP	T	T	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	T	T	A	A	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
OBSCN	84033	broad.mit.edu	36	1	226471507	226471507	+	Missense_Mutation	SNP	G	G	T	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
RYR2	6262	broad.mit.edu	36	1	235869021	235869021	+	Missense_Mutation	SNP	G	G	C	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
MRC1	4360	broad.mit.edu	36	10	17905243	17905243	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
DNA2	1763	broad.mit.edu	36	10	69846615	69846615	+	Missense_Mutation	SNP	C	C	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
CDH23	64072	broad.mit.edu	36	10	73228218	73228218	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
PLAU	5328	broad.mit.edu	36	10	75343489	75343489	+	Missense_Mutation	SNP	C	C	G	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
DLG5	9231	broad.mit.edu	36	10	79239434	79239434	+	Silent	SNP	G	G	T	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
CYP2C19	1557	broad.mit.edu	36	10	96592593	96592593	+	Missense_Mutation	SNP	A	A	G	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	A	A	G	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
SLK	9748	broad.mit.edu	36	10	105758054	105758054	+	Nonsense_Mutation	SNP	G	G	T	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
CUZD1	50624	broad.mit.edu	36	10	124588689	124588689	+	Silent	SNP	G	G	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
ANO5	203859	broad.mit.edu	36	11	22250961	22250961	+	Silent	SNP	T	T	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	T	T	A	A	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
API5	8539	broad.mit.edu	36	11	43298958	43298958	+	Missense_Mutation	SNP	A	A	C	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	A	A	C	C	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
ALG8	79053	broad.mit.edu	36	11	77509759	77509759	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
MED17	9440	broad.mit.edu	36	11	93166659	93166659	+	Missense_Mutation	SNP	A	A	G	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	A	A	G	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
TRIM29	23650	broad.mit.edu	36	11	119501780	119501780	+	Missense_Mutation	SNP	A	A	T	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	A	A	T	T	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
PHB2	11331	broad.mit.edu	36	12	6946612	6946612	+	Missense_Mutation	SNP	G	G	C	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
CD163L1	283316	broad.mit.edu	36	12	7422921	7422921	+	Missense_Mutation	SNP	G	G	T	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
DIP2B	57609	broad.mit.edu	36	12	49355378	49355378	+	Splice_Site	SNP	G	G	C	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
ITGB7	3695	broad.mit.edu	36	12	51877565	51877565	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
MARS	4141	broad.mit.edu	36	12	56178523	56178523	+	Missense_Mutation	SNP	A	A	G	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	A	A	G	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
KITLG	4254	broad.mit.edu	36	12	87436769	87436769	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
APAF1	317	broad.mit.edu	36	12	97567504	97567504	+	Missense_Mutation	SNP	A	A	T	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	A	A	T	T	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture;Sequenom			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
CRY1	1407	broad.mit.edu	36	12	105919188	105919188	+	Missense_Mutation	SNP	T	T	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	T	T	A	A	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
CMKLR1	1240	broad.mit.edu	36	12	107210540	107210540	+	Silent	SNP	G	G	C	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
MED13L	23389	broad.mit.edu	36	12	114905449	114905449	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
EFNB2	1948	broad.mit.edu	36	13	105943609	105943609	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
CEBPE	1053	broad.mit.edu	36	14	22656582	22656582	+	Missense_Mutation	SNP	A	A	G	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	A	A	G	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
TRIP11	9321	broad.mit.edu	36	14	91542457	91542457	+	Missense_Mutation	SNP	T	T	G	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	T	T	G	G	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
TRIP11	9321	broad.mit.edu	36	14	91550328	91550328	+	Silent	SNP	T	T	C	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture;Sequenom			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
DYNC1H1	1778	broad.mit.edu	36	14	101574586	101574586	+	Missense_Mutation	SNP	C	C	G	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
DUOX1	53905	broad.mit.edu	36	15	43235335	43235335	+	Nonsense_Mutation	SNP	T	T	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	T	T	A	A	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
FANCI	55215	broad.mit.edu	36	15	87648148	87648148	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
C15orf32	145858	broad.mit.edu	36	15	90816584	90816584	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
TP53	7157	broad.mit.edu	36	17	7519094	7519094	+	Splice_Site	SNP	A	A	C	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	A	A	C	C	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
ALDH3A2	224	broad.mit.edu	36	17	19515740	19515740	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
EFTUD2	9343	broad.mit.edu	36	17	40292851	40292851	+	Missense_Mutation	SNP	A	A	T	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	A	A	T	T	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
HOXB4	3214	broad.mit.edu	36	17	44010278	44010278	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
ZNF823	55552	broad.mit.edu	36	19	11693769	11693769	+	Missense_Mutation	SNP	T	T	C	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture;Sequenom			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
RHPN2	85415	broad.mit.edu	36	19	38174570	38174570	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
ZNF222	7673	broad.mit.edu	36	19	49227973	49227973	+	Missense_Mutation	SNP	G	G	T	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
IL4I1	259307	broad.mit.edu	36	19	55090198	55090198	+	Missense_Mutation	SNP	G	G	C	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
CNOT3	4849	broad.mit.edu	36	19	59349278	59349278	+	Missense_Mutation	SNP	G	G	C	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
TNNT1	7138	broad.mit.edu	36	19	60340308	60340308	+	Missense_Mutation	SNP	C	C	G	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
ZNF586	54807	broad.mit.edu	36	19	62982007	62982007	+	Silent	SNP	A	A	G	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	A	A	G	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
LPIN1	23175	broad.mit.edu	36	2	11860585	11860585	+	Missense_Mutation	SNP	C	C	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
SLC5A6	8884	broad.mit.edu	36	2	27279631	27279631	+	Missense_Mutation	SNP	C	C	G	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
DYSF	8291	broad.mit.edu	36	2	71739621	71739621	+	Missense_Mutation	SNP	A	A	G	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	A	A	G	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
EIF5B	9669	broad.mit.edu	36	2	99373550	99373550	+	Missense_Mutation	SNP	C	C	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
NEB	4703	broad.mit.edu	36	2	152070318	152070318	+	Missense_Mutation	SNP	C	C	G	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
KIAA1715	80856	broad.mit.edu	36	2	176512585	176512585	+	Silent	SNP	T	T	C	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
PARD3B	117583	broad.mit.edu	36	2	206188590	206188590	+	Missense_Mutation	SNP	C	C	G	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
ADAM23	8745	broad.mit.edu	36	2	207146159	207146159	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
PIKFYVE	200576	broad.mit.edu	36	2	208926972	208926972	+	Nonsense_Mutation	SNP	C	C	T	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture;Sequenom			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
FARSB	10056	broad.mit.edu	36	2	223173002	223173002	+	Missense_Mutation	SNP	T	T	G	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	T	T	G	G	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
NCL	4691	broad.mit.edu	36	2	232033805	232033805	+	Silent	SNP	A	A	T	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	A	A	T	T	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
DEFB118	117285	broad.mit.edu	36	20	29424534	29424534	+	Missense_Mutation	SNP	C	C	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
TTLL9	164395	broad.mit.edu	36	20	29961352	29961352	+	Missense_Mutation	SNP	G	G	C	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
GSS	2937	broad.mit.edu	36	20	32994031	32994031	+	Missense_Mutation	SNP	G	G	C	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
ADNP	23394	broad.mit.edu	36	20	48952048	48952048	+	Silent	SNP	A	A	G	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	A	A	G	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
CYP24A1	1591	broad.mit.edu	36	20	52215711	52215711	+	Missense_Mutation	SNP	T	T	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	T	T	A	A	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
TAF4	6874	broad.mit.edu	36	20	60023144	60023144	+	Missense_Mutation	SNP	G	G	C	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
ZNF385D	79750	broad.mit.edu	36	3	21437843	21437843	+	Missense_Mutation	SNP	C	C	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
TOP2B	7155	broad.mit.edu	36	3	25640152	25640152	+	Missense_Mutation	SNP	T	T	C	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
SETD2	29072	broad.mit.edu	36	3	47100875	47100875	+	Missense_Mutation	SNP	A	A	T	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	A	A	T	T	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
ZBTB20	26137	broad.mit.edu	36	3	115552582	115552582	+	Missense_Mutation	SNP	C	C	G	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
GOLGB1	2804	broad.mit.edu	36	3	122893196	122893196	+	Nonsense_Mutation	SNP	C	C	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
ACAD9	28976	broad.mit.edu	36	3	130100986	130100986	+	Missense_Mutation	SNP	G	G	T	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
PLSCR1	5359	broad.mit.edu	36	3	147716578	147716578	+	Missense_Mutation	SNP	C	C	G	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
CLNK	116449	broad.mit.edu	36	4	10182479	10182479	+	Missense_Mutation	SNP	T	T	C	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
HERC5	51191	broad.mit.edu	36	4	89634439	89634439	+	Missense_Mutation	SNP	T	T	G	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	T	T	G	G	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
DDX60	55601	broad.mit.edu	36	4	169443135	169443135	+	Silent	SNP	A	A	G	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	A	A	G	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
SLC45A2	51151	broad.mit.edu	36	5	33999763	33999763	+	Silent	SNP	G	G	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
GPR98	84059	broad.mit.edu	36	5	90026254	90026254	+	Missense_Mutation	SNP	A	A	T	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	A	A	T	T	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
LNPEP	4012	broad.mit.edu	36	5	96359496	96359496	+	Missense_Mutation	SNP	G	G	T	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
SLCO6A1	133482	broad.mit.edu	36	5	101783449	101783449	+	Silent	SNP	C	C	T	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
ITK	3702	broad.mit.edu	36	5	156601293	156601293	+	Missense_Mutation	SNP	G	G	T	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture;Sequenom			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
ODZ2	57451	broad.mit.edu	36	5	167585814	167585814	+	Missense_Mutation	SNP	C	C	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
RMND5B	64777	broad.mit.edu	36	5	177503619	177503619	+	Missense_Mutation	SNP	C	C	G	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
CLK4	57396	broad.mit.edu	36	5	177983020	177983020	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
ZNF354B	117608	broad.mit.edu	36	5	178243672	178243672	+	Missense_Mutation	SNP	T	T	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	T	T	A	A	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
BAT1	7919	broad.mit.edu	36	6	31616213	31616213	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
TBX18	9096	broad.mit.edu	36	6	85503762	85503762	+	Missense_Mutation	SNP	C	C	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
EPHA7	2045	broad.mit.edu	36	6	94038740	94038740	+	Missense_Mutation	SNP	C	C	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
MCHR2	84539	broad.mit.edu	36	6	100475619	100475619	+	Missense_Mutation	SNP	T	T	C	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
LAMA4	3910	broad.mit.edu	36	6	112613197	112613197	+	Nonsense_Mutation	SNP	G	G	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
SP4	6671	broad.mit.edu	36	7	21436472	21436472	+	Missense_Mutation	SNP	T	T	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	T	T	A	A	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
HERPUD2	64224	broad.mit.edu	36	7	35641447	35641447	+	Missense_Mutation	SNP	T	T	C	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
PKD1L1	168507	broad.mit.edu	36	7	47818010	47818010	+	Nonsense_Mutation	SNP	G	G	T	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
SEMA3E	9723	broad.mit.edu	36	7	82957428	82957428	+	Missense_Mutation	SNP	C	C	G	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
ZNF804B	219578	broad.mit.edu	36	7	88802287	88802287	+	Silent	SNP	C	C	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
CCDC136	64753	broad.mit.edu	36	7	128240009	128240009	+	Missense_Mutation	SNP	A	A	T	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	A	A	T	T	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
CNTNAP2	26047	broad.mit.edu	36	7	147231700	147231700	+	Missense_Mutation	SNP	A	A	T	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	A	A	T	T	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
LZTS1	11178	broad.mit.edu	36	8	20154709	20154709	+	Missense_Mutation	SNP	A	A	T	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	A	A	T	T	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
MPDZ	8777	broad.mit.edu	36	9	13214467	13214467	+	Missense_Mutation	SNP	C	C	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
FAM75A3	727830	broad.mit.edu	36	9	40694225	40694225	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
SH2D3C	10044	broad.mit.edu	36	9	129551356	129551356	+	Missense_Mutation	SNP	C	C	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
FUBP3	8939	broad.mit.edu	36	9	132495968	132495968	+	Missense_Mutation	SNP	C	C	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
GRPR	2925	broad.mit.edu	36	X	16078664	16078664	+	Missense_Mutation	SNP	T	T	A	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	T	T	A	A	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture;Sequenom			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
HTR2C	3358	broad.mit.edu	36	X	114047420	114047420	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
GRIA3	2892	broad.mit.edu	36	X	122360239	122360239	+	Silent	SNP	A	A	G	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	A	A	G	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
ZIC3	7547	broad.mit.edu	36	X	136478821	136478821	+	Silent	SNP	C	C	T	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
NBEA	26960	broad.mit.edu	36	13	34636551	34636567	+	Frame_Shift_Del	DEL	CATAACACAATTCACCT	-	CATAACACAATTCACCT	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	CATAACACAATTCACCT	CATAACACAATTCACCT	-	-	CATAACACAATTCACCT	CATAACACAATTCACCT	Unknown	Valid	Somatic	Phase_I	Capture	Illumina_Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
PHKA2	5256	broad.mit.edu	36	X	18879229	18879248	+	Frame_Shift_Del	DEL	GTGCCACAGGTGGCGGTGTT	-	GTGCCACAGGTGGCGGTGTT	novel	none	TCGA-13-0923-01A-01W-0420-08	TCGA-13-0923-10A-01D-0399-08	GTGCCACAGGTGGCGGTGTT	GTGCCACAGGTGGCGGTGTT	-	-	GTGCCACAGGTGGCGGTGTT	GTGCCACAGGTGGCGGTGTT	Unknown	Valid	Somatic	Phase_I	Capture	Illumina_Capture			Illumina GAIIx	4126360c-2b59-4614-b822-69a0d44fdeb5	e47c5482-5de2-4773-81b5-9922261823f6
