Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error
FLG	2312	genome.wustl.edu	36	1	150547933	150547933	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	1	150547933	150547933	C	T	SNP	FLG	NM_002016	human	genbank	54_36p	-1	provisional	missense	c.6053	p.R2018K		NULL	-	-	no_errors
ARHGEF11	9826	genome.wustl.edu	36	1	155176012	155176012	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	1	155176012	155176012	C	T	SNP	ARHGEF11	NM_198236	human	genbank	54_36p	-1	reviewed	missense	c.4048	p.D1350N	0.14	NULL	-	-	no_errors
RGS18	64407	genome.wustl.edu	36	1	190395038	190395038	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	1	190395038	190395038	G	A	SNP	RGS18	NM_130782	human	genbank	54_36p	1	reviewed	missense	c.185	p.R62H		NULL	-	-	no_errors
IKBKE	9641	genome.wustl.edu	36	1	204719852	204719852	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	1	204719852	204719852	C	T	SNP	IKBKE	NM_014002	human	genbank	54_36p	1	validated	silent	c.1200	p.P400	1	NULL	Pkinase;HMMPfam_Pkinase	-	no_errors
TESK2	10420	genome.wustl.edu	36	1	45660000	45660000	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	1	45660000	45660000	G	A	SNP	TESK2	NM_007170	human	genbank	54_36p	-1	reviewed	missense	c.328	p.H110Y	1	NULL	-	-	no_errors
ADAM12	8038	genome.wustl.edu	36	10	128009048	128009048	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	10	128009048	128009048	C	T	SNP	ADAM12	NM_003474	human	genbank	54_36p	-1	reviewed	missense	c.109	p.G37R		HMMPfam_Pep_M12B_propep	"HMMPfam_Disintegrin;superfamily_Blood coagulation inhibitor (disintegrin);Reprolysin;HMMPfam_Reprolysin;Disintegrin;Blood coagulation inhibitor (disintegrin);Pep_M12B_propep;HMMPfam_Pep_M12B_propep;ADAM_CR;HMMPfam_ADAM_CR;EGF_2;HMMPfam_EGF_2;Metalloproteases (""zincins"") catalytic domain;superfamily_Metalloproteases (""zincins"") catalytic domain"	-	no_errors
C10orf90	118611	genome.wustl.edu	36	10	128104618	128104619	+	Nonsense_Mutation	DNP	TC	TC	AA	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	TC	TC					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	10	128104618	128104619	TC	AA	DNP	C10orf90	NM_001004298	human	genbank	54_36p	-1	validated	nonsense	c.1993_1992	p.KKK664N*	1.000:1.000	NULL	-	-	no_errors
DCLRE1C	64421	genome.wustl.edu	36	10	15016413	15016413	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	10	15016413	15016413	G	T	SNP	DCLRE1C	NM_001033855	human	genbank	54_36p	-1	reviewed	missense	c.650	p.T217N	1	NULL	HMMPfam_DRMBL;superfamily_Metallo-hydrolase/oxidoreductase	-	no_errors
SVIL	6840	genome.wustl.edu	36	10	29817606	29817606	+	Silent	SNP	G	G	C	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	10	29817606	29817606	G	C	SNP	SVIL	NM_021738	human	genbank	54_36p	-1	reviewed	silent	c.4278	p.V1426	1	NULL	HMMPfam_VHP;superfamily_VHP Villin headpiece domain;HMMPfam_Gelsolin;superfamily_Actin depolymerizing proteins	-	no_errors
GDF2	2658	genome.wustl.edu	36	10	48036475	48036475	+	Silent	SNP	G	G	C	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	10	48036475	48036475	G	C	SNP	GDF2	NM_016204	human	genbank	54_36p	-1	reviewed	silent	c.225	p.V75	0.97	NULL	-	-	no_errors
SLIT1	6585	genome.wustl.edu	36	10	98763798	98763798	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	10	98763798	98763798	T	A	SNP	SLIT1	NM_003061	human	genbank	54_36p	-1	validated	missense	c.3077	p.N1026I	1	HMMPfam_EGF	HMMPfam_LRRNT;HMMPfam_LRRCT;HMMPfam_LRR_1;HMMPfam_EGF;superfamily_Concanavalin A-like lectins/glucanases;HMMPfam_Laminin_G_2;superfamily_L domain-like;superfamily_EGF/Laminin	-	no_errors
CASP5	838	genome.wustl.edu	36	11	104378115	104378115	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	11	104378115	104378115	C	G	SNP	CASP5	NM_004347	human	genbank	54_36p	-1	reviewed	missense	c.519	p.E173D		NULL	HMMPfam_CARD;superfamily_DEATH domain;HMMPfam_Peptidase_C14;superfamily_Caspase-like	-	no_errors
SC5DL	6309	genome.wustl.edu	36	11	120682321	120682321	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	11	120682321	120682321	C	T	SNP	SC5DL	NM_001024956	human	genbank	54_36p	1	reviewed	silent	c.360	p.V120		HMMPfam_Sterol_desat	HMMPfam_Sterol_desat	-	no_errors
AHNAK	79026	genome.wustl.edu	36	11	62050359	62050359	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	11	62050359	62050359	G	C	SNP	AHNAK	NM_001620	human	genbank	54_36p	-1	validated	missense	c.8106	p.I2702M	0.4	NULL	HMMPfam_PDZ;superfamily_PDZ domain-like;HMMPfam_CheC	-	no_errors
CCDC88B	283234	genome.wustl.edu	36	11	63877766	63877766	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	11	63877766	63877766	C	G	SNP	CCDC88B	NM_032251	human	genbank	54_36p	1	validated	missense	c.3837	p.D1279E	1	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
RBM14	10432	genome.wustl.edu	36	11	66148264	66148264	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	11	66148264	66148264	A	G	SNP	RBM14	NM_006328	human	genbank	54_36p	1	validated	missense	c.341	p.Y114C	1	HMMPfam_RRM_1	HMMPfam_RRM_1;superfamily_RNA-binding domain RBD	-	no_errors
RBM14	10432	genome.wustl.edu	36	11	66150529	66150529	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	11	66150529	66150529	A	C	SNP	RBM14	NM_006328	human	genbank	54_36p	1	validated	missense	c.1824	p.L608F	1	NULL	HMMPfam_RRM_1;superfamily_RNA-binding domain RBD	-	no_errors
TMEM126A	84233	genome.wustl.edu	36	11	85042847	85042847	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	11	85042847	85042847	T	C	SNP	TMEM126A	NM_032273	human	genbank	54_36p	1	provisional	missense	c.179	p.V60A	1	NULL	-	-	no_errors
PAH	5053	genome.wustl.edu	36	12	101812699	101812706	+	Frame_Shift_Del	DEL	CTCAAGAT	CTCAAGAT	-		Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	CTCAAGAT	CTCAAGAT	CTCAAGAT	-	CTCAAGAT	CTCAAGAT	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	12	101812699	101812706	CTCAAGAT	-	DEL	PAH	NM_000277	human	genbank	54_36p	-1	reviewed	frame_shift_del	c.296_289	p.I97fs	0.997:1.000:1.000:1.000:1.000:1.000:1.000:1.000	HMMPfam_ACT	HMMPfam_Biopterin_H,HMMPfam_ACT,superfamily_ACT-like,superfamily_Aromatic aminoacid monoxygenases catalytic and oligomerization domains	(deletion:cds_exon[101812643,101812826])	no_errors
KRT71	112802	genome.wustl.edu	36	12	51228750	51228763	+	Splice_Site	DEL	ACGGCTTCAAAGAG	ACGGCTTCAAAGAG	-		Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	ACGGCTTCAAAGAG	ACGGCTTCAAAGAG	ACGGCTTCAAAGAG	-	ACGGCTTCAAAGAG	ACGGCTTCAAAGAG	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	12	51228750	51228763	ACGGCTTCAAAGAG	-	DEL	KRT71	NM_033448	human	genbank	54_36p	-1	provisional	splice_site_del	c.NULL	e4+-11	0.983:0.945:0.004:0.005:0.095:0.245:0.879:0.900:0.854:0.843:0.978:0.982:0.978:0.569	-	-	(deletion:intron[51228368,51228751], cds_exon[51228752,51228847])	no_errors
NBEA	26960	genome.wustl.edu	36	13	35022684	35022684	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	13	35022684	35022684	G	C	SNP	NBEA	NM_015678	human	genbank	54_36p	1	reviewed	missense	c.6656	p.R2219P	1	NULL	HMMPfam_Beach;HMMPfam_WD40;superfamily_Concanavalin A-like lectins/glucanases;HMMPfam_DUF1088;superfamily_WD40 repeat-like;superfamily_ARM repeat;superfamily_PH domain-like;superfamily_BEACH domain	-	no_errors
OR4K2	390431	genome.wustl.edu	36	14	19415193	19415193	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	14	19415193	19415193	T	A	SNP	OR4K2	NM_001005501	human	genbank	54_36p	1	provisional	missense	c.927	p.N309K	0	NULL	-	-	no_errors
RNASE12	493901	genome.wustl.edu	36	14	20128389	20128389	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	14	20128389	20128389	C	T	SNP	RNASE12	NM_001024822	human	genbank	54_36p	-1	provisional	missense	c.334	p.E112K		NULL	-	-	no_errors
KIAA0247	9766	genome.wustl.edu	36	14	69247448	69247448	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	14	69247448	69247448	G	A	SNP	KIAA0247	NM_014734	human	genbank	54_36p	1	validated	silent	c.911	p.*304	1	NULL	HMMPfam_Sushi;superfamily_Complement control module/SCR domain	-	no_errors
ESRRB	2103	genome.wustl.edu	36	14	75975583	75975583	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	14	75975583	75975583	T	C	SNP	ESRRB	NM_004452	human	genbank	54_36p	1	reviewed	missense	c.134	p.F45S	1	NULL	HMMPfam_Hormone_recep;HMMPfam_zf-C4;superfamily_Nuclear receptor ligand-binding domain;superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors
MGA	23269	genome.wustl.edu	36	15	39776435	39776435	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	15	39776435	39776435	C	A	SNP	MGA	NM_001080541	human	genbank	54_36p	1	provisional	missense	c.1935	p.S645R	0.05	NULL	-	-	no_errors
KLHL25	64410	genome.wustl.edu	36	15	84112344	84112344	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	15	84112344	84112344	T	C	SNP	KLHL25	NM_022480	human	genbank	54_36p	-1	validated	missense	c.1702	p.I568V	0.99	HMMPfam_Kelch_1	HMMPfam_Kelch_1;superfamily_Galactose oxidase central domain;HMMPfam_BACK;HMMPfam_BTB;superfamily_POZ domain	-	no_errors
DNAH3	55567	genome.wustl.edu	36	16	20888760	20888761	+	Missense_Mutation	DNP	TA	TA	CT	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	TA	TA					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	16	20888760	20888761	TA	CT	DNP	DNAH3	NM_017539	human	genbank	54_36p	-1	provisional	missense	c.8313_8312	p.L2771Q	0.000:0.847	NULL	-	-	no_errors
CDRT1	374286	genome.wustl.edu	36	17	15442644	15442644	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	17	15442644	15442644	G	C	SNP	CDRT1	NM_006382	human	genbank	54_36p	-1	provisional	missense	c.1482	p.H494Q	0.998	NULL	-	-	no_errors
TTC25	83538	genome.wustl.edu	36	17	37348883	37348883	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	17	37348883	37348883	G	A	SNP	TTC25	ENST00000377543	human	ensembl	54_36p	1	known	silent	c.990	p.Q330	1	HMMPfam_TPR_1	HMMPfam_TPR_1;superfamily_TPR-like	-	no_errors
TP53	7157	genome.wustl.edu	36	17	7517853	7517853	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	17	7517853	7517853	A	C	SNP	TP53	NM_000546	human	genbank	54_36p	-1	reviewed	missense	c.810	p.F270L	1	HMMPfam_P53	superfamily_p53-like transcription factors;superfamily_p53 tetramerization domain;P53_tetramer;HMMPfam_P53_tetramer;P53;HMMPfam_P53;P53_TAD;HMMPfam_P53_TAD	-	no_errors
LAMA3	3909	genome.wustl.edu	36	18	19765088	19765088	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	18	19765088	19765088	G	T	SNP	LAMA3	NM_198129	human	genbank	54_36p	1	reviewed	missense	c.8501	p.S2834I		HMMPfam_Laminin_G_2	HMMPfam_Laminin_B;HMMPfam_Laminin_EGF;HMMPfam_Laminin_N;superfamily_Galactose-binding domain-like;superfamily_Concanavalin A-like lectins/glucanases;HMMPfam_Laminin_I;HMMPfam_Laminin_II;HMMPfam_Laminin_G_2;superfamily_Spectrin repeat;superfamily_EGF/Laminin	-	no_errors
UNC13A	23025	genome.wustl.edu	36	19	17646509	17646509	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	19	17646509	17646509	C	T	SNP	UNC13A	NM_001080421	human	genbank	54_36p	-1	provisional	missense	c.373	p.A125T	1	NULL	-	-	no_errors
PSG7	5676	genome.wustl.edu	36	19	48121803	48121803	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	19	48121803	48121803	C	A	SNP	PSG7	NM_002783	human	genbank	54_36p	-1	reviewed	missense	c.1205	p.G402V	0.01	NULL	HMMPfam_V-set;HMMPfam_ig;superfamily_Immunoglobulin	-	pseudogene
SIGLEC6	946	genome.wustl.edu	36	19	56722855	56722855	+	Silent	SNP	T	T	C	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	19	56722855	56722855	T	C	SNP	SIGLEC6	NM_001245	human	genbank	54_36p	-1	validated	silent	c.1113	p.Q371		NULL	HMMPfam_I-set;HMMPfam_V-set;HMMPfam_ig;superfamily_Immunoglobulin	-	no_errors
ZNF264	9422	genome.wustl.edu	36	19	62414536	62414536	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	19	62414536	62414536	G	A	SNP	ZNF264	NM_003417	human	genbank	54_36p	1	validated	missense	c.259	p.D87N	0.66	NULL	HMMPfam_KRAB;HMMPfam_zf-C2H2;superfamily_KRAB domain (Kruppel-associated box Pfam 01352);superfamily_C2H2 and C2HC zinc fingers	-	no_errors
MUC16	94025	genome.wustl.edu	36	19	8950509	8950509	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	19	8950509	8950509	A	T	SNP	MUC16	NM_024690	human	genbank	54_36p	-1	validated	missense	c.2306	p.V769D		NULL	HMMPfam_SEA;superfamily_Immunoglobulin;superfamily_SEA domain	-	no_errors
ZC3H6	376940	genome.wustl.edu	36	2	112790617	112790617	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	2	112790617	112790617	G	A	SNP	ZC3H6	NM_198581	human	genbank	54_36p	1	validated	missense	c.847	p.E283K	1	NULL	-	-	no_errors
CCDC148	130940	genome.wustl.edu	36	2	158878516	158878516	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	2	158878516	158878516	A	T	SNP	CCDC148	NM_138803	human	genbank	54_36p	-1	provisional	missense	c.901	p.L301M	1	NULL	-	-	no_errors
WDR35	57539	genome.wustl.edu	36	2	20017094	20017094	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	2	20017094	20017094	C	T	SNP	WDR35	NM_001006657	human	genbank	54_36p	-1	reviewed	missense	c.1415	p.R472Q	1	NULL	-	-	no_errors
APOB	338	genome.wustl.edu	36	2	21082364	21082364	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	2	21082364	21082364	C	G	SNP	APOB	NM_000384	human	genbank	54_36p	-1	reviewed	missense	c.10881	p.K3627N	1	NULL	HMMPfam_Vitellogenin_N;HMMPfam_DUF1081;HMMPfam_DUF1943	-	no_errors
DNMT3A	1788	genome.wustl.edu	36	2	25323031	25323031	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	2	25323031	25323031	A	G	SNP	DNMT3A	NM_022552	human	genbank	54_36p	-1	reviewed	missense	c.1241	p.F414S	1	NULL	HMMPfam_PWWP;HMMPfam_DNA_methylase;superfamily_FYVE/PHD zinc finger;superfamily_S-adenosyl-L-methionine-dependent methyltransferases;superfamily_Tudor/PWWP/MBT	-	no_errors
FSHR	2492	genome.wustl.edu	36	2	49043568	49043568	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	2	49043568	49043568	G	T	SNP	FSHR	NM_000145	human	genbank	54_36p	-1	reviewed	missense	c.1896	p.N632K	0.97	NULL	-	-	no_errors
DQX1	165545	genome.wustl.edu	36	2	74600293	74600293	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	2	74600293	74600293	T	A	SNP	DQX1	NM_133637	human	genbank	54_36p	-1	validated	missense	c.1350	p.E450D	0.99	NULL	-	-	no_errors
CBLN4	140689	genome.wustl.edu	36	20	54012484	54012484	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	20	54012484	54012484	C	A	SNP	CBLN4	NM_080617	human	genbank	54_36p	-1	reviewed	missense	c.151	p.D51Y	1	NULL	-	-	no_errors
DIDO1	11083	genome.wustl.edu	36	20	60998403	60998403	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	20	60998403	60998403	C	T	SNP	DIDO1	NM_033081	human	genbank	54_36p	-1	reviewed	missense	c.1979	p.S660N		NULL	-	-	no_errors
MYH15	22989	genome.wustl.edu	36	3	109612336	109612336	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	3	109612336	109612336	C	T	SNP	MYH15	NM_014981	human	genbank	54_36p	-1	validated	missense	c.4339	p.V1447I	0.88	NULL	-	-	no_errors
HPS3	84343	genome.wustl.edu	36	3	150360617	150360617	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	3	150360617	150360617	C	T	SNP	HPS3	NM_032383	human	genbank	54_36p	1	reviewed	missense	c.1967	p.P656L	0.58	NULL	-	-	no_errors
GMPS	8833	genome.wustl.edu	36	3	157136889	157136889	+	Nonsense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	3	157136889	157136889	C	T	SNP	GMPS	NM_003875	human	genbank	54_36p	1	reviewed	nonsense	c.1876	p.Q626*	1	HMMPfam_GMP_synt_C	HMMPfam_GATase;HMMPfam_GMP_synt_C;HMMPfam_ExsB;superfamily_Class I glutamine amidotransferase-like;superfamily_Adenine nucleotide alpha hydrolases-like;superfamily_GMP synthetase C-terminal dimerisation domain	-	no_errors
SMARCAD1	56916	genome.wustl.edu	36	4	95374277	95374277	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	4	95374277	95374277	G	A	SNP	SMARCAD1	NM_020159	human	genbank	54_36p	1	validated	missense	c.518	p.S173N	1	NULL	-	-	no_errors
SPINK6	404203	genome.wustl.edu	36	5	147573674	147573674	+	Silent	SNP	T	T	C	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	5	147573674	147573674	T	C	SNP	SPINK6	NM_205841	human	genbank	54_36p	1	validated	silent	c.90	p.C30	0.42	HMMPfam_Kazal_1	HMMPfam_Kazal_1;superfamily_Kazal-type serine protease inhibitors	-	no_errors
UGT3A1	133688	genome.wustl.edu	36	5	35990268	35990268	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	5	35990268	35990268	C	A	SNP	UGT3A1	NM_152404	human	genbank	54_36p	-1	provisional	silent	c.1365	p.L455	1	NULL	-	-	no_errors
NIPBL	25836	genome.wustl.edu	36	5	37056376	37056376	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	5	37056376	37056376	A	G	SNP	NIPBL	NM_133433	human	genbank	54_36p	1	reviewed	missense	c.5069	p.K1690R	1	NULL	superfamily_ARM repeat	-	no_errors
FASTKD3	79072	genome.wustl.edu	36	5	7920093	7920093	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	5	7920093	7920093	A	G	SNP	FASTKD3	NM_024091	human	genbank	54_36p	-1	validated	silent	c.1104	p.P368	0.65	NULL	HMMPfam_FAST_1;HMMPfam_FAST_2;HMMPfam_RAP	-	no_errors
MOG	4340	genome.wustl.edu	36	6	29746141	29746141	+	Nonsense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	6	29746141	29746141	C	T	SNP	MOG	NM_002433	human	genbank	54_36p	1	reviewed	nonsense	c.697	p.R233*	0.99	NULL	HMMPfam_V-set;superfamily_Immunoglobulin	-	no_errors
PKHD1	5314	genome.wustl.edu	36	6	52017815	52017815	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	6	52017815	52017815	G	C	SNP	PKHD1	NM_138694	human	genbank	54_36p	-1	reviewed	missense	c.2623	p.P875A	0.28	NULL	HMMPfam_TIG;superfamily_Pectin lyase-like;superfamily_E set domains;superfamily_Anthrax protective antigen	-	no_errors
PMPCB	9512	genome.wustl.edu	36	7	102735387	102735387	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	7	102735387	102735387	G	C	SNP	PMPCB	NM_004279	human	genbank	54_36p	1	reviewed	missense	c.845	p.S282T	1	NULL	-	-	no_errors
HGF	3082	genome.wustl.edu	36	7	81174600	81174600	+	Nonsense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	7	81174600	81174600	C	A	SNP	HGF	NM_000601	human	genbank	54_36p	-1	reviewed	nonsense	c.1558	p.G520*	1	HMMPfam_Trypsin	HMMPfam_Kringle;HMMPfam_Trypsin;HMMPfam_PAN_1;superfamily_Trypsin-like serine proteases;superfamily_Kringle-like;superfamily_Hairpin loop containing domain-like	-	no_errors
CACNA2D1	781	genome.wustl.edu	36	7	81437180	81437180	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	7	81437180	81437180	C	G	SNP	CACNA2D1	NM_000722	human	genbank	54_36p	-1	reviewed	missense	c.2261	p.R754T	1	NULL	HMMPfam_VWA;HMMPfam_Cache_1;HMMPfam_VWA_N;HMMPfam_VGCC_alpha2;superfamily_vWA-like	-	no_errors
CSMD3	114788	genome.wustl.edu	36	8	113433840	113433840	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	8	113433840	113433840	T	C	SNP	CSMD3	NM_198123	human	genbank	54_36p	-1	validated	missense	c.6236	p.D2079G	1	HMMPfam_Sushi	HMMPfam_Sushi;HMMPfam_CUB;superfamily_Spermadhesin CUB domain;superfamily_Complement control module/SCR domain	-	no_errors
GSDMC	56169	genome.wustl.edu	36	8	130829959	130829959	+	Silent	SNP	G	G	C	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	8	130829959	130829959	G	C	SNP	GSDMC	NM_031415	human	genbank	54_36p	-1	validated	silent	c.1497	p.L499		NULL	-	-	no_errors
KHDRBS3	10656	genome.wustl.edu	36	8	136688425	136688425	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	8	136688425	136688425	G	A	SNP	KHDRBS3	NM_006558	human	genbank	54_36p	1	provisional	missense	c.853	p.D285N	1	NULL	-	-	no_errors
VCPIP1	80124	genome.wustl.edu	36	8	67739740	67739740	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	8	67739740	67739740	C	A	SNP	VCPIP1	NM_025054	human	genbank	54_36p	-1	validated	missense	c.2008	p.G670C	1	NULL	-	-	no_errors
CPA6	57094	genome.wustl.edu	36	8	68558631	68558631	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	8	68558631	68558631	T	A	SNP	CPA6	NM_020361	human	genbank	54_36p	-1	validated	missense	c.764	p.K255I	1	NULL	-	-	no_errors
NCOA2	10499	genome.wustl.edu	36	8	71203286	71203286	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	8	71203286	71203286	A	C	SNP	NCOA2	NM_006540	human	genbank	54_36p	-1	validated	missense	c.3617	p.L1206R	1	NULL	superfamily_Nuclear receptor coactivator interlocking domain;HMMPfam_DUF1518;superfamily_HLH helix-loop-helix DNA-binding domain;HMMPfam_PAS;HMMPfam_Nuc_rec_co-act;HMMPfam_SRC-1;superfamily_PYP-like sensor domain (PAS domain)	-	no_errors
LOC642585	642585	genome.wustl.edu	36	X	80072304	80072304	+	RNA	SNP	C	C	T	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	X	80072304	80072304	C	T	SNP	LOC642585	XR_038848	human	genbank	54_36p	1	model	rna	NULL	NULL	1	-	-	-	pseudogene
CASK	8573	genome.wustl.edu	36	X	41331178	41331178	+	Nonsense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	X	41331178	41331178	C	A	SNP	CASK	NM_003688	human	genbank	54_36p	-1	validated	nonsense	c.1240	p.E414*	1	HMMPfam_L27	HMMPfam_Pkinase;superfamily_SH3-domain;HMMPfam_PDZ;superfamily_PDZ domain-like;HMMPfam_Guanylate_kin;superfamily_Protein kinase-like (PK-like);HMMPfam_SH3_2;HMMPfam_L27;superfamily_L27 domain;superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
PAGE2	203569	genome.wustl.edu	36	X	55134516	55134516	+	Nonsense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-13-0924-01A-01W-0421-09	TCGA-13-0924-10A-01W-0421-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	510dda3c-6a1f-4781-972f-c9c270608c72	ffae93da-42b4-4115-b2c7-1fad830979c6	X	55134516	55134516	G	T	SNP	PAGE2	NM_207339	human	genbank	54_36p	1	provisional	nonsense	c.220	p.E74*		NULL	-	-	no_errors
