Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
ABCC5	10057	hgsc.bcm.edu	36	3	185121793	185121793	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	SOLID			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
CLCN4	1183	hgsc.bcm.edu	36	X	10113170	10113170	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	SOLID			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
LRP1	4035	hgsc.bcm.edu	36	12	55864460	55864460	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	SOLID			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
NAV3	89795	hgsc.bcm.edu	36	12	77037330	77037330	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	SOLID			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
PALM2-AKAP2	445815	hgsc.bcm.edu	36	9	111939566	111939566	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	SOLID			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
ACBD4	79777	hgsc.bcm.edu	36	17	40569422	40569423	+	Frame_Shift_Del	DEL	CT	CT	-	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	CT	CT	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
AGAP3	116988	hgsc.bcm.edu	36	7	150468093	150468093	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
AOC2	314	hgsc.bcm.edu	36	17	38250869	38250871	+	In_Frame_Del	DEL	CTT	CTT	-	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	CTT	CTT	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
ARAP1	116985	hgsc.bcm.edu	36	11	72084460	72084460	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
ARHGAP6	395	hgsc.bcm.edu	36	X	11097617	11097617	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
ASB11	140456	hgsc.bcm.edu	36	X	15215980	15215980	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
BAI2	576	hgsc.bcm.edu	36	1	31974901	31974901	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
C1QL4	338761	hgsc.bcm.edu	36	12	48013235	48013236	+	Frame_Shift_Ins	INS	-	-	TT	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
C20orf186	149954	hgsc.bcm.edu	36	20	31134874	31134875	+	Frame_Shift_Ins	INS	-	-	C	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
C2CD2	25966	hgsc.bcm.edu	36	21	42200301	42200301	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
C9orf171	389799	hgsc.bcm.edu	36	9	134402855	134402855	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
CACNA2D2	9254	hgsc.bcm.edu	36	3	50391996	50391996	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
CEACAM6	4680	hgsc.bcm.edu	36	19	46952499	46952499	+	Silent	SNP	A	A	G	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
CPAMD8	27151	hgsc.bcm.edu	36	19	16900883	16900884	+	Frame_Shift_Ins	INS	-	-	C	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
DNAI2	64446	hgsc.bcm.edu	36	17	69789693	69789693	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
DNAJC11	55735	hgsc.bcm.edu	36	1	6620969	6620973	+	Frame_Shift_Del	DEL	CAGCA	CAGCA	-	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	CAGCA	CAGCA	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
EGFR	1956	hgsc.bcm.edu	36	7	55191950	55191950	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
EPHA7	2045	hgsc.bcm.edu	36	6	94024620	94024620	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
ERCC2	2068	hgsc.bcm.edu	36	19	50550798	50550798	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
EVC2	132884	hgsc.bcm.edu	36	4	5675310	5675310	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
EVC2	132884	hgsc.bcm.edu	36	4	5675312	5675312	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
FBF1	85302	hgsc.bcm.edu	36	17	71434554	71434554	+	Splice_Site	SNP	C	C	G	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
FBXO6	26270	hgsc.bcm.edu	36	1	11655959	11655959	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
FLJ20184	54848	hgsc.bcm.edu	36	4	106729858	106729858	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Sanger_PCR_WGA			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
FRMD4A	55691	hgsc.bcm.edu	36	10	13741413	13741414	+	Frame_Shift_Del	DEL	CC	CC	-	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	CC	CC	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
GSG2	83903	hgsc.bcm.edu	36	17	3574813	3574814	+	Frame_Shift_Ins	INS	-	-	TG	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
JAKMIP3	282973	hgsc.bcm.edu	36	10	133799528	133799529	+	Frame_Shift_Ins	INS	-	-	T	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
KIAA0226	9711	hgsc.bcm.edu	36	3	198893168	198893168	+	Splice_Site	SNP	C	C	T	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
LILRB3	11025	hgsc.bcm.edu	36	19	59414824	59414827	+	Frame_Shift_Del	DEL	TTGC	TTGC	-	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	TTGC	TTGC	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
MAST1	22983	hgsc.bcm.edu	36	19	12823779	12823779	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
METTL11A	28989	hgsc.bcm.edu	36	9	131434886	131434886	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
MMP28	79148	hgsc.bcm.edu	36	17	31119441	31119442	+	Frame_Shift_Ins	INS	-	-	GC	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
MYBPC3	4607	hgsc.bcm.edu	36	11	47315686	47315686	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
NOM1	64434	hgsc.bcm.edu	36	7	156451859	156451859	+	Splice_Site	SNP	T	T	A	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
PCDHB15	56121	hgsc.bcm.edu	36	5	140605479	140605481	+	In_Frame_Del	DEL	ATG	ATG	-	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	ATG	ATG	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
PDSS2	57107	hgsc.bcm.edu	36	6	107702052	107702052	+	Silent	SNP	T	T	C	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
PDZD2	23037	hgsc.bcm.edu	36	5	32125880	32125880	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
PER2	8864	hgsc.bcm.edu	36	2	238831994	238831994	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
PFAS	5198	hgsc.bcm.edu	36	17	8111088	8111090	+	In_Frame_Del	DEL	CGG	CGG	-	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	CGG	CGG	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
PHKA2	5256	hgsc.bcm.edu	36	X	18825295	18825296	+	Frame_Shift_Del	DEL	CC	CC	-	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	CC	CC	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
PTK2B	2185	hgsc.bcm.edu	36	8	27349753	27349753	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
QSER1	79832	hgsc.bcm.edu	36	11	32936071	32936071	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
RASA3	22821	hgsc.bcm.edu	36	13	113835644	113835644	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
SALL4	57167	hgsc.bcm.edu	36	20	49841710	49841710	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
SCN4A	6329	hgsc.bcm.edu	36	17	59376564	59376564	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
SIGLEC9	27180	hgsc.bcm.edu	36	19	56323492	56323493	+	Frame_Shift_Ins	INS	-	-	T	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
SPG7	6687	hgsc.bcm.edu	36	16	88140595	88140596	+	Frame_Shift_Ins	INS	-	-	G	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
SPTB	6710	hgsc.bcm.edu	36	14	64331923	64331925	+	In_Frame_Del	DEL	CAT	CAT	-	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	CAT	CAT	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
SPTBN2	6712	hgsc.bcm.edu	36	11	66214144	66214144	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
SYT5	6861	hgsc.bcm.edu	36	19	60379269	60379270	+	Frame_Shift_Ins	INS	-	-	A	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
TECPR2	9895	hgsc.bcm.edu	36	14	101970790	101970790	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
TRIM59	286827	hgsc.bcm.edu	36	3	161639062	161639062	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
TRPM3	80036	hgsc.bcm.edu	36	9	72667830	72667830	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
TTN	7273	hgsc.bcm.edu	36	2	179134636	179134636	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
UBA1	7317	hgsc.bcm.edu	36	X	46945276	46945276	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
USP6	9098	hgsc.bcm.edu	36	17	4977965	4977965	+	Silent	SNP	G	G	A	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
VPS13B	157680	hgsc.bcm.edu	36	8	100935629	100935629	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
WDR33	55339	hgsc.bcm.edu	36	2	128180449	128180450	+	Frame_Shift_Ins	INS	-	-	CACTTCT	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
WSCD1	23302	hgsc.bcm.edu	36	17	5934489	5934491	+	In_Frame_Del	DEL	GGG	GGG	-	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	GGG	GGG	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
ZMIZ2	83637	hgsc.bcm.edu	36	7	44770599	44770599	+	Nonsense_Mutation	SNP	T	T	A	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
ZNF281	23528	hgsc.bcm.edu	36	1	198644306	198644306	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_IV	WXS	none			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
ADAMTS12	81792	hgsc.bcm.edu	36	5	33917038	33917038	+	Silent	SNP	C	C	T	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	454_PCR_WGA			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
ANKRD23	200539	hgsc.bcm.edu	36	2	96871972	96871972	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	454_PCR_WGA			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
DLGAP3	58512	hgsc.bcm.edu	36	1	35142860	35142860	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	454_PCR_WGA			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
EFEMP1	2202	hgsc.bcm.edu	36	2	55962258	55962258	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	454_PCR_WGA			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
F11R	50848	hgsc.bcm.edu	36	1	159237075	159237075	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	454_PCR_WGA			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
GPATCH8	23131	hgsc.bcm.edu	36	17	39834010	39834010	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	454_PCR_WGA			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
IFRD2	7866	hgsc.bcm.edu	36	3	50302845	50302845	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	454_PCR_WGA			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
MAGEB17	645864	hgsc.bcm.edu	36	X	16099315	16099315	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	454_PCR_WGA			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
MYL1	4632	hgsc.bcm.edu	36	2	210867218	210867218	+	Silent	SNP	G	G	T	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	454_PCR_WGA			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
NKTR	4820	hgsc.bcm.edu	36	3	42655651	42655651	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	454_PCR_WGA			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
PTPRG	5793	hgsc.bcm.edu	36	3	62117807	62117807	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	454_PCR_WGA			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
SIM1	6492	hgsc.bcm.edu	36	6	100945446	100945446	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	454_PCR_WGA			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
TAF12	6883	hgsc.bcm.edu	36	1	28804553	28804553	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	454_PCR_WGA			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
ZMIZ2	83637	hgsc.bcm.edu	36	7	44766684	44766684	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	454_PCR_WGA			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
TIAM1	7074	hgsc.bcm.edu	36	21	31539714	31539714	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
TTN	7273	hgsc.bcm.edu	36	2	179290639	179290639	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
MYO18B	84700	hgsc.bcm.edu	36	22	24494303	24494303	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Sanger_PCR_WGA			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
PELI1	57162	hgsc.bcm.edu	36	2	64175555	64175555	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Sanger_PCR_WGA			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
PRR16	51334	hgsc.bcm.edu	36	5	120049708	120049708	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-13-1408-01A-01W-0490-10	TCGA-13-1408-10A-01W-0491-10	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Sanger_PCR_WGA			SOLID	61aa0295-5d02-4f73-a1d7-5389a72d2b67	5bbf6f9c-09a6-4b0a-8c51-4ff24e857dab
