Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
PINK1	65018	broad.mit.edu	36	1	20848267	20848267	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
TNN	63923	broad.mit.edu	36	1	173333294	173333294	+	Silent	SNP	C	C	T	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
CACNA1C	775	broad.mit.edu	36	12	2492406	2492406	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
CACNA1C	775	broad.mit.edu	36	12	2644415	2644415	+	Missense_Mutation	SNP	C	C	G	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
FGF23	8074	broad.mit.edu	36	12	4350108	4350108	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
AKAP3	10566	broad.mit.edu	36	12	4607565	4607565	+	Missense_Mutation	SNP	C	C	A	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
TEP1	7011	broad.mit.edu	36	14	19906445	19906445	+	Silent	SNP	A	A	G	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	A	A	G	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
ZFYVE26	23503	broad.mit.edu	36	14	67330180	67330180	+	Silent	SNP	C	C	T	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture;Sequenom			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
ZNF839	55778	broad.mit.edu	36	14	101875210	101875210	+	Silent	SNP	G	G	A	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
MAP1A	4130	broad.mit.edu	36	15	41606018	41606018	+	Silent	SNP	C	C	A	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
GLDN	342035	broad.mit.edu	36	15	49483974	49483974	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
NARG2	79664	broad.mit.edu	36	15	58521964	58521964	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
SLC12A4	6560	broad.mit.edu	36	16	66553081	66553081	+	Silent	SNP	C	C	T	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
TP53	7157	broad.mit.edu	36	17	7519095	7519095	+	Splice_Site	SNP	C	C	A	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
KCNF1	3754	broad.mit.edu	36	2	10970756	10970756	+	Silent	SNP	G	G	A	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
STAMBP	10617	broad.mit.edu	36	2	73930019	73930019	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
NEB	4703	broad.mit.edu	36	2	152101951	152101951	+	Missense_Mutation	SNP	A	A	C	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	A	A	C	C	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
ANKRD5	63926	broad.mit.edu	36	20	9978770	9978770	+	Missense_Mutation	SNP	T	T	A	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	T	T	A	A	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
DIP2A	23181	broad.mit.edu	36	21	46784257	46784257	+	Missense_Mutation	SNP	A	A	G	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	A	A	G	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
TUBGCP6	85378	broad.mit.edu	36	22	49000210	49000210	+	Silent	SNP	G	G	A	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
MLH1	4292	broad.mit.edu	36	3	37017540	37017540	+	Nonsense_Mutation	SNP	C	C	T	rs63751221	unknown	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
CYP8B1	1582	broad.mit.edu	36	3	42892237	42892237	+	Nonsense_Mutation	SNP	G	G	A	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
TTC14	151613	broad.mit.edu	36	3	181810643	181810643	+	Silent	SNP	T	T	C	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
KIT	3815	broad.mit.edu	36	4	55299416	55299416	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
NUP155	9631	broad.mit.edu	36	5	37353868	37353868	+	Nonsense_Mutation	SNP	C	C	A	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
UBR2	23304	broad.mit.edu	36	6	42731385	42731385	+	Missense_Mutation	SNP	G	G	C	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
CUL7	9820	broad.mit.edu	36	6	43121332	43121332	+	Missense_Mutation	SNP	T	T	C	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture;Sequenom			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
PRSS35	167681	broad.mit.edu	36	6	84290040	84290040	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
ABCA13	154664	broad.mit.edu	36	7	48289036	48289036	+	Nonsense_Mutation	SNP	C	C	T	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
TFR2	7036	broad.mit.edu	36	7	100056646	100056646	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture;Sequenom			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
CUX1	1523	broad.mit.edu	36	7	101628828	101628828	+	Missense_Mutation	SNP	C	C	G	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture;Sequenom			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
GRM8	2918	broad.mit.edu	36	7	126533856	126533856	+	Silent	SNP	C	C	T	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
FAM135B	51059	broad.mit.edu	36	8	139232705	139232705	+	Silent	SNP	G	G	A	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
FAM166A	401565	broad.mit.edu	36	9	139258058	139258058	+	Missense_Mutation	SNP	A	A	T	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	A	A	T	T	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
PTEN	5728	broad.mit.edu	36	10	89707652	89707652	+	Frame_Shift_Del	DEL	C	-	-	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	C	C	-	-	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Illumina_Capture			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
DAD1	1603	broad.mit.edu	36	14	22127883	22127884	+	Frame_Shift_Del	DEL	AG	-	AG	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	AG	AG	-	-	AG	AG	Unknown	Valid	Somatic	Phase_I	Capture	Illumina_Capture			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
REST	5978	broad.mit.edu	36	4	57472321	57472324	+	Frame_Shift_Del	DEL	ACAT	-	-	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	ACAT	ACAT	-	-	ACAT	ACAT	Unknown	Valid	Somatic	Phase_I	Capture	Illumina_Capture			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
TNXB	7148	broad.mit.edu	36	6	32137896	32137925	+	Splice_Site	DEL	CCCATCGTCCACTCACCTGTCACCCCGATG	-	CCCATCGTCCACTCACCTGTCACCCCGATG	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	CCCATCGTCCACTCACCTGTCACCCCGATG	CCCATCGTCCACTCACCTGTCACCCCGATG	-	-	CCCATCGTCCACTCACCTGTCACCCCGATG	CCCATCGTCCACTCACCTGTCACCCCGATG	Unknown	Valid	Somatic	Phase_I	Capture	Illumina_Capture			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
SLC37A3	84255	broad.mit.edu	36	7	139694985	139694987	+	In_Frame_Del	DEL	AGA	-	AGA	novel	none	TCGA-13-1492-01A-01D-0472-08	TCGA-13-1492-10A-01W-0545-08	AGA	AGA	-	-	AGA	AGA	Unknown	Valid	Somatic	Phase_I	Capture	Illumina_Capture			Illumina GAIIx	bb917fd2-fe7b-4675-8af4-d986e3f4cdaf	85153653-fa5d-43da-bcee-6c3ae8ffc931
