Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
PDPN	10630	broad.mit.edu	36	1	13809526	13809526	+	Missense_Mutation	SNP	G	G	C	novel	none	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
FMO5	2330	broad.mit.edu	36	1	145139448	145139448	+	Missense_Mutation	SNP	T	T	G	novel	none	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	T	T	G	G	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
FCRL2	79368	broad.mit.edu	36	1	155985361	155985361	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
AKR1C1	1645	broad.mit.edu	36	10	4998131	4998131	+	Missense_Mutation	SNP	C	C	A	novel	none	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
ZNF33A	7581	broad.mit.edu	36	10	38384567	38384567	+	Silent	SNP	G	G	C	novel	none	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
HSPA12A	259217	broad.mit.edu	36	10	118424738	118424738	+	Silent	SNP	G	G	A	novel	none	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
AHNAK	79026	broad.mit.edu	36	11	62055266	62055266	+	Missense_Mutation	SNP	T	T	C	novel	none	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
MAPKAPK5	8550	broad.mit.edu	36	12	110802716	110802716	+	Splice_Site	SNP	T	T	A	novel	none	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	T	T	A	A	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
POTEB	339010	broad.mit.edu	36	15	19336052	19336052	+	Silent	SNP	A	A	T	rs28566570	unknown	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	A	A	T	T	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
PKD1L2	114780	broad.mit.edu	36	16	79745444	79745444	+	Missense_Mutation	SNP	C	C	A	novel	none	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
TP53	7157	broad.mit.edu	36	17	7518991	7518991	+	Missense_Mutation	SNP	T	T	A	novel	none	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	T	T	A	A	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
CRKRS	51755	broad.mit.edu	36	17	34881415	34881415	+	Nonsense_Mutation	SNP	C	C	T	novel	none	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture;Sequenom			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
WDR7	23335	broad.mit.edu	36	18	52514569	52514569	+	Missense_Mutation	SNP	A	A	C	novel	none	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	A	A	C	C	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
ATP13A1	57130	broad.mit.edu	36	19	19628522	19628522	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
ZNF43	7594	broad.mit.edu	36	19	21782339	21782339	+	Missense_Mutation	SNP	A	A	C	novel	none	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	A	A	C	C	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
ZNF473	25888	broad.mit.edu	36	19	55241592	55241592	+	Nonsense_Mutation	SNP	C	C	T	novel	none	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
SYT3	84258	broad.mit.edu	36	19	55827455	55827455	+	Missense_Mutation	SNP	C	C	A	novel	none	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
ZNF665	79788	broad.mit.edu	36	19	58360782	58360782	+	Missense_Mutation	SNP	C	C	A	novel	none	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
GPR113	165082	broad.mit.edu	36	2	26387192	26387192	+	Missense_Mutation	SNP	C	C	G	novel	none	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
CRNKL1	51340	broad.mit.edu	36	20	19979249	19979249	+	Silent	SNP	C	C	T	novel	none	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture;Sequenom			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
COMT	1312	broad.mit.edu	36	22	18331093	18331093	+	Silent	SNP	G	G	A	novel	none	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
SETMAR	6419	broad.mit.edu	36	3	4329990	4329990	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
LRRC3B	116135	broad.mit.edu	36	3	26726762	26726762	+	Missense_Mutation	SNP	A	A	G	novel	none	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	A	A	G	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
SI	6476	broad.mit.edu	36	3	166224101	166224101	+	Missense_Mutation	SNP	G	G	T	novel	none	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
PPARGC1A	10891	broad.mit.edu	36	4	23425162	23425162	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture;Sequenom			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
SEC31A	22872	broad.mit.edu	36	4	83989074	83989074	+	Silent	SNP	C	C	T	novel	none	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
DCHS2	54798	broad.mit.edu	36	4	155438480	155438480	+	Missense_Mutation	SNP	C	C	G	novel	none	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
TRIM7	81786	broad.mit.edu	36	5	180559616	180559616	+	Silent	SNP	C	C	T	novel	none	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
HLA-DPB1	3115	broad.mit.edu	36	6	33151827	33151827	+	Silent	SNP	C	C	A	novel	none	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
T	6862	broad.mit.edu	36	6	166491851	166491851	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
PXMP3	5828	broad.mit.edu	36	8	78058564	78058564	+	Nonsense_Mutation	SNP	T	T	A	novel	none	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	T	T	A	A	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
FRMD3	257019	broad.mit.edu	36	9	85147995	85147995	+	Silent	SNP	C	C	T	novel	none	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
CPXCR1	53336	broad.mit.edu	36	X	87895468	87895468	+	Nonsense_Mutation	SNP	C	C	T	novel	none	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
RBMX2	51634	broad.mit.edu	36	X	129370969	129370969	+	Silent	SNP	A	A	G	novel	none	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	A	A	G	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
BCDIN3D	144233	broad.mit.edu	36	12	48518700	48518700	+	Frame_Shift_Del	DEL	C	-	C	novel	none	TCGA-13-1495-01A-01W-0545-08	TCGA-13-1495-10A-01D-0472-08	C	C	-	-	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Illumina_Capture			Illumina GAIIx	a5b00ef6-3b8c-47b8-8a33-e575e6edd0eb	2b681f1b-9f68-419d-b5c2-97447d78a44b
