Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error
LOC645089	645089	genome.wustl.edu	36	6	164603	164603	+	RNA	SNP	C	T	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	6	164603	164603	C	T	SNP	LOC645089	XR_017608	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.000	-	-	-	pseudogene
ZNF596	169270	genome.wustl.edu	36	8	185538	185538	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	8	185538	185538	G	A	SNP	ZNF596	NM_001042415	human	genbank	54_36p	+1	validated	missense	c.691	p.A231T	0.946	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
LOC644026	644026	genome.wustl.edu	36	X	404552	404552	+	Silent	SNP	C	T	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	X	404552	404552	C	T	SNP	LOC644026	XM_001714036	human	genbank	54_36p	-1	model	silent	c.867	p.S289	0.667	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon
SLC12A7	10723	genome.wustl.edu	36	5	1131822	1131822	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	5	1131822	1131822	C	T	SNP	SLC12A7	NM_006598	human	genbank	54_36p	-1	validated	missense	c.1448	p.R483Q	0.986	HMMPfam_AA_permease	HMMPfam_AA_permease	-	no_errors
MUC5AC	4586	genome.wustl.edu	36	11	1170220	1170220	+	Silent	SNP	C	A	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	11	1170220	1170220	C	A	SNP	MUC5AC	ENST00000358378	human	ensembl	54_36p	+1	known	silent	c.891	p.A297	0.001	NULL	HMMSmart_SM00214,HMMSmart_SM00216,HMMPfam_VWD,HMMPfam_C8,superfamily_Serine proterase inhibitors,PatternScan_VWFC_1,HMMPfam_VWC,HMMPfam_Cys_knot,HMMSmart_SM00041,PatternScan_CTCK_1	-	no_start_codon
LOC732360	732360	genome.wustl.edu	36	12	3176716	3176716	+	RNA	SNP	C	T	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	12	3176716	3176716	C	T	SNP	LOC732360	XR_038607	human	genbank	54_36p	+1	model	rna	NULL	NULL	0.001	-	-	-	pseudogene
MEFV	4210	genome.wustl.edu	36	16	3237178	3237178	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	16	3237178	3237178	G	T	SNP	MEFV	NM_000243	human	genbank	54_36p	-1	reviewed	missense	c.1426	p.Q476K	0.259	NULL	superfamily_DEATH domain,HMMPfam_PAAD_DAPIN,HMMPfam_zf-B_box,HMMSmart_SM00336,superfamily_B-box zinc-binding domain,HMMSmart_SM00589,HMMPfam_SPRY,HMMSmart_SM00449	-	no_errors
GLIS3	169792	genome.wustl.edu	36	9	4107803	4107803	+	Nonsense_Mutation	SNP	T	T	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	9	4107803	4107803	T	A	SNP	GLIS3	NM_001042413	human	genbank	54_36p	-1	reviewed	nonsense	c.1675	p.R559*	1.000	HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2	-	no_errors
PPAPDC2	403313	genome.wustl.edu	36	9	4653126	4653126	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	9	4653126	4653126	G	A	SNP	PPAPDC2	NM_203453	human	genbank	54_36p	+1	validated	missense	c.751	p.V251I	1.000	superfamily_AcPase_VanPerase,HMMSmart_acidPPc,HMMPfam_PAP2	superfamily_AcPase_VanPerase,HMMSmart_acidPPc,HMMPfam_PAP2	-	no_errors
PLD2	5338	genome.wustl.edu	36	17	4660238	4660238	+	Silent	SNP	G	G	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	17	4660238	4660238	G	A	SNP	PLD2	NM_002663	human	genbank	54_36p	+1	validated	silent	c.810	p.G270	0.996	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	superfamily_PX domain,HMMPfam_PX,HMMSmart_SM00312,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_Phospholipase D/nuclease,HMMPfam_PLDc,HMMSmart_SM00155	-	no_errors
FARS2	10667	genome.wustl.edu	36	6	5716531	5716531	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	6	5716531	5716531	A	G	SNP	FARS2	NM_006567	human	genbank	54_36p	+1	reviewed	missense	c.1226	p.K409R	0.955	superfamily_Fdx_AntiC_bd,HMMPfam_FDX-ACB	superfamily_SSF55681,HMMPfam_tRNA-synt_2d,superfamily_Fdx_AntiC_bd,HMMPfam_FDX-ACB	-	no_errors
GLDC	2731	genome.wustl.edu	36	9	6526105	6526105	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	9	6526105	6526105	T	A	SNP	GLDC	NM_000170	human	genbank	54_36p	-1	validated	missense	c.2797	p.I933F	1.000	superfamily_PyrdxlP-dep_Trfase_major	HMMPfam_GDC-P,superfamily_PyrdxlP-dep_Trfase_major	-	no_errors
TP53	7157	genome.wustl.edu	36	17	7519131	7519131	+	Missense_Mutation	SNP	C	T	T	rs28934578	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	17	7519131	7519131	C	T	SNP	TP53	NM_000546	human	genbank	54_36p	-1	reviewed	missense	c.524	p.R175H	1.000	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors
OR10A3	26496	genome.wustl.edu	36	11	7916719	7916719	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	11	7916719	7916719	C	A	SNP	OR10A3	NM_001003745	human	genbank	54_36p	-1	provisional	missense	c.925	p.V309L	0.001	NULL	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
BRPF1	7862	genome.wustl.edu	36	3	9761009	9761009	+	Silent	SNP	A	A	C	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	3	9761009	9761009	A	C	SNP	BRPF1	NM_001003694	human	genbank	54_36p	+1	reviewed	silent	c.2737	p.R913	1.000	NULL	HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_EPL1,superfamily_FYVE_PHD_ZnF,HMMSmart_PHD,HMMPfam_PHD,PatternScan_ZF_PHD_1,superfamily_Bromodomain,HMMSmart_BROMO,HMMPfam_Bromodomain,superfamily_SSF63748,HMMPfam_PWWP,HMMSmart_PWWP	-	no_errors
MYH8	4626	genome.wustl.edu	36	17	10250187	10250187	+	Silent	SNP	C	C	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	17	10250187	10250187	C	G	SNP	MYH8	NM_002472	human	genbank	54_36p	-1	validated	silent	c.2328	p.L776	0.991	superfamily_SSF52540,HMMSmart_MYSc	HMMPfam_Myosin_N,superfamily_SSF52540,HMMSmart_MYSc,HMMPfam_Myosin_head,HMMSmart_IQ,HMMPfam_IQ,HMMPfam_Myosin_tail_1	-	no_errors
MYH1	4619	genome.wustl.edu	36	17	10339113	10339113	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	17	10339113	10339113	C	A	SNP	MYH1	NM_005963	human	genbank	54_36p	-1	reviewed	nonsense	c.5326	p.E1776*	1.000	HMMPfam_Myosin_tail_1	HMMPfam_Myosin_N,superfamily_SSF52540,HMMSmart_MYSc,HMMPfam_Myosin_head,HMMSmart_IQ,HMMPfam_IQ,HMMPfam_Myosin_tail_1	-	no_errors
TLR7	51284	genome.wustl.edu	36	X	12813822	12813822	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	X	12813822	12813822	G	A	SNP	TLR7	NM_016562	human	genbank	54_36p	+1	reviewed	missense	c.274	p.V92I	0.901	superfamily_L domain-like	superfamily_L domain-like,HMMSmart_SM00365,HMMSmart_SM00369,HMMPfam_LRR_1,HMMSmart_SM00082,HMMPfam_LRRCT,superfamily_Toll/Interleukin receptor TIR domain,HMMSmart_SM00255,HMMPfam_TIR	-	no_errors
PRAMEF4	400735	genome.wustl.edu	36	1	12864583	12864583	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	1	12864583	12864583	T	A	SNP	PRAMEF4	NM_001009611	human	genbank	54_36p	-1	validated	missense	c.554	p.K185M	0.086	superfamily_SSF52047	superfamily_SSF52047	-	no_errors
PRAMEF14	729528	genome.wustl.edu	36	1	13541712	13541712	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	1	13541712	13541712	C	T	SNP	PRAMEF14	NM_001099854	human	genbank	54_36p	-1	provisional	missense	c.1061	p.S354N	0.001	superfamily_SSF52047	superfamily_SSF52047	-	no_errors
USH1C	10083	genome.wustl.edu	36	11	17487553	17487553	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	11	17487553	17487553	A	G	SNP	USH1C	NM_153676	human	genbank	54_36p	-1	reviewed	missense	c.1939	p.W647R	1.000	NULL	superfamily_PDZ,HMMPfam_PDZ,HMMSmart_PDZ	-	no_errors
NUP153	9972	genome.wustl.edu	36	6	17737059	17737059	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	6	17737059	17737059	A	T	SNP	NUP153	NM_005124	human	genbank	54_36p	-1	reviewed	missense	c.3350	p.V1117D	0.418	NULL	HMMPfam_Nup153,HMMPfam_zf-RanBP,HMMSmart_ZnF_RBZ,PatternScan_ZF_RANBP2_1,HMMPfam_Nup_retrotrp_bd	-	no_errors
LOC645312	645312	genome.wustl.edu	36	11	18167420	18167420	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	11	18167420	18167420	G	T	SNP	LOC645312	XM_928351	human	genbank	54_36p	+1	model	missense	c.298	p.G100C	0.998	superfamily_Glycolipid transfer protein GLTP,HMMPfam_GLTP	superfamily_Glycolipid transfer protein GLTP,HMMPfam_GLTP	-	pseudogene
PRPSAP2	5636	genome.wustl.edu	36	17	18709959	18709959	+	Missense_Mutation	SNP	T	G	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	17	18709959	18709959	T	G	SNP	PRPSAP2	NM_002767	human	genbank	54_36p	+1	reviewed	missense	c.88	p.S30A	0.967	superfamily_SSF53271	superfamily_SSF53271,HMMPfam_RelB,HMMPfam_Pribosyltran	-	no_errors
NSUN6	221078	genome.wustl.edu	36	10	18980117	18980117	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	10	18980117	18980117	A	G	SNP	NSUN6	NM_182543	human	genbank	54_36p	-1	validated	missense	c.22	p.S8P	1.000	NULL	superfamily_S-adenosyl-L-methionine-dependent methyltransferases,superfamily_PUA domain-like,HMMPfam_PUA,HMMPfam_Nol1_Nop2_Fmu,PatternScan_NOL1_NOP2_SUN	-	no_errors
TEP1	7011	genome.wustl.edu	36	14	19946381	19946381	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	14	19946381	19946381	G	A	SNP	TEP1	NM_007110	human	genbank	54_36p	-1	reviewed	missense	c.58	p.R20W	0.992	HMMPfam_TEP1_N	HMMPfam_TEP1_N,HMMPfam_TROVE,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_NACHT,HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
APOB	338	genome.wustl.edu	36	2	21088927	21088927	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	2	21088927	21088927	C	A	SNP	APOB	NM_000384	human	genbank	54_36p	-1	reviewed	missense	c.4318	p.V1440L	0.000	NULL	superfamily_Lipovitellin-phosvitin complex beta-sheet shell regions,HMMPfam_Vitellogenin_N,HMMSmart_SM00638,superfamily_Lipovitellin-phosvitin complex superhelical domain,HMMPfam_DUF1943,HMMPfam_DUF1081	-	no_errors
FGF9	2254	genome.wustl.edu	36	13	21173396	21173396	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	13	21173396	21173396	C	A	SNP	FGF9	NM_002010	human	genbank	54_36p	+1	reviewed	nonsense	c.449	p.S150*	0.998	superfamily_Cytokine,HMMSmart_SM00442,HMMPfam_FGF	superfamily_Cytokine,HMMSmart_SM00442,HMMPfam_FGF,PatternScan_HBGF_FGF	-	no_errors
MKRN3	7681	genome.wustl.edu	36	15	21362151	21362151	+	Silent	SNP	T	T	C	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	15	21362151	21362151	T	C	SNP	MKRN3	NM_005664	human	genbank	54_36p	+1	reviewed	silent	c.129	p.A43	0.000	NULL	HMMSmart_ZnF_C3H1,HMMPfam_zf-CCCH,superfamily_SSF57850,HMMSmart_RING,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1	-	no_errors
NDN	4692	genome.wustl.edu	36	15	21482961	21482961	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	15	21482961	21482961	G	A	SNP	NDN	NM_002487	human	genbank	54_36p	-1	reviewed	missense	c.497	p.A166V	0.425	HMMPfam_MAGE	HMMPfam_MAGE	-	no_errors
MLLT10	8028	genome.wustl.edu	36	10	22056818	22056818	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	10	22056818	22056818	A	T	SNP	MLLT10	NM_004641	human	genbank	54_36p	+1	validated	missense	c.2066	p.N689I	1.000	NULL	superfamily_FYVE_PHD_ZnF,HMMSmart_PHD,HMMPfam_PHD,PatternScan_ZF_PHD_1	-	no_errors
PIWIL2	55124	genome.wustl.edu	36	8	22268919	22268919	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	8	22268919	22268919	C	G	SNP	PIWIL2	NM_018068	human	genbank	54_36p	+1	validated	missense	c.2878	p.H960D	0.998	superfamily_Ribonuclease H-like	superfamily_PAZ domain,HMMPfam_PAZ,superfamily_Ribonuclease H-like,HMMPfam_Piwi	-	no_errors
SNURF	8926	genome.wustl.edu	36	15	22758418	22758418	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	15	22758418	22758418	C	G	SNP	SNURF	NM_005678	human	genbank	54_36p	+1	reviewed	missense	c.79	p.R27G	0.996	HMMPfam_SNURF	HMMPfam_SNURF	-	no_errors
WASF3	10810	genome.wustl.edu	36	13	26157836	26157836	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	13	26157836	26157836	A	G	SNP	WASF3	NM_006646	human	genbank	54_36p	+1	reviewed	missense	c.1363	p.K455E	1.000	HMMPfam_WH2,HMMSmart_SM00246	HMMPfam_WH2,HMMSmart_SM00246	-	no_errors
TCF23	150921	genome.wustl.edu	36	2	27229094	27229094	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	2	27229094	27229094	G	T	SNP	TCF23	NM_175769	human	genbank	54_36p	+1	provisional	missense	c.500	p.G167V	0.998	NULL	superfamily_HLH_basic,HMMPfam_HLH,HMMSmart_HLH	-	no_errors
PAN3	255967	genome.wustl.edu	36	13	27732642	27732642	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	13	27732642	27732642	C	G	SNP	PAN3	NM_175854	human	genbank	54_36p	+1	validated	missense	c.707	p.P236R	1.000	NULL	superfamily_Kinase_like	-	no_errors
N6AMT1	29104	genome.wustl.edu	36	21	29179486	29179486	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	21	29179486	29179486	G	T	SNP	N6AMT1	NM_013240	human	genbank	54_36p	-1	reviewed	missense	c.53	p.A18D	0.101	HMMPfam_MTS,superfamily_S-adenosyl-L-methionine-dependent methyltransferases	HMMPfam_MTS,superfamily_S-adenosyl-L-methionine-dependent methyltransferases,PatternScan_N6_MTASE	-	no_errors
GHRHR	2692	genome.wustl.edu	36	7	30975207	30975207	+	Silent	SNP	C	T	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	7	30975207	30975207	C	T	SNP	GHRHR	NM_000823	human	genbank	54_36p	+1	reviewed	silent	c.165	p.C55	0.738	superfamily_SSF111418,HMMSmart_HormR,HMMPfam_HRM,PatternScan_G_PROTEIN_RECEP_F2_1	superfamily_SSF111418,HMMSmart_HormR,HMMPfam_HRM,PatternScan_G_PROTEIN_RECEP_F2_1,superfamily_SSF81321,HMMPfam_7tm_2,PatternScan_G_PROTEIN_RECEP_F2_2	-	no_errors
BAT2	7916	genome.wustl.edu	36	6	31707130	31707130	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	6	31707130	31707130	A	T	SNP	BAT2	NM_080686	human	genbank	54_36p	+1	reviewed	nonsense	c.2701	p.K901*	0.211	NULL	HMMPfam_BAT2_N	-	no_errors
TNXB	7148	genome.wustl.edu	36	6	32120897	32120897	+	Silent	SNP	G	G	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	6	32120897	32120897	G	A	SNP	TNXB	NM_019105	human	genbank	54_36p	-1	reviewed	silent	c.10926	p.P3642	1.000	superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	superfamily_EGF/Laminin,PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_SM00181,HMMPfam_EGF_2,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,HMMSmart_SM00186,HMMPfam_Fibrinogen_C,superfamily_Fibrinogen C-terminal domain-like,PatternScan_FIBRIN_AG_C_DOMAIN	-	no_errors
RASD2	23551	genome.wustl.edu	36	22	34277599	34277599	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	22	34277599	34277599	C	G	SNP	RASD2	NM_014310	human	genbank	54_36p	+1	reviewed	missense	c.375	p.N125K	1.000	superfamily_SSF52540,HMMSmart_RAS,HMMPfam_Ras	superfamily_SSF52540,HMMSmart_RAS,HMMPfam_Ras	-	no_errors
MRPS6	64968	genome.wustl.edu	36	21	34367745	34367745	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	21	34367745	34367745	C	G	SNP	MRPS6	ENST00000399312	human	ensembl	54_36p	+1	known	missense	c.58	p.R20G	0.001	NULL	superfamily_Ribosomal protein S6	-	no_start_codon
CREB3	10488	genome.wustl.edu	36	9	35723472	35723472	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	9	35723472	35723472	C	G	SNP	CREB3	NM_006368	human	genbank	54_36p	+1	reviewed	missense	c.425	p.P142R	1.000	superfamily_Euk_transcr_DNA	superfamily_Euk_transcr_DNA,HMMPfam_bZIP_1,HMMSmart_BRLZ,PatternScan_BZIP_BASIC	-	no_errors
ARPP-21	10777	genome.wustl.edu	36	3	35753837	35753837	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	3	35753837	35753837	G	T	SNP	ARPP-21	NM_016300	human	genbank	54_36p	+1	validated	missense	c.1623	p.M541I	0.543	NULL	HMMSmart_SM00393,superfamily_R3H domain,HMMPfam_R3H	-	no_errors
PLCG1	5335	genome.wustl.edu	36	20	39227803	39227803	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	20	39227803	39227803	C	G	SNP	PLCG1	NM_002660	human	genbank	54_36p	+1	reviewed	missense	c.1722	p.I574M	0.826	superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_SSF50729,HMMSmart_PH,superfamily_SSF55550,HMMSmart_SH2,HMMPfam_SH2	superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH,PatternScan_EF_HAND_1,superfamily_SSF47473,HMMSmart_PLCXc,HMMPfam_PI-PLC-X,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_SSF55550,HMMSmart_SH2,HMMPfam_SH2,superfamily_SH3,HMMPfam_SH3_1,HMMSmart_SH3,HMMPfam_PI-PLC-Y,HMMSmart_PLCYc,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_C2	-	no_errors
DAB2	1601	genome.wustl.edu	36	5	39418828	39418828	+	Silent	SNP	C	C	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	5	39418828	39418828	C	T	SNP	DAB2	NM_001343	human	genbank	54_36p	-1	validated	silent	c.990	p.P330	0.005	NULL	superfamily_PH domain-like,HMMSmart_SM00462,HMMPfam_PID,PatternScan_PFKB_KINASES_1	-	no_errors
HDAC5	10014	genome.wustl.edu	36	17	39543666	39543666	+	Silent	SNP	C	C	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	17	39543666	39543666	C	T	SNP	HDAC5	NM_001015053	human	genbank	54_36p	-1	reviewed	silent	c.54	p.L18	1.000	NULL	superfamily_Arginase/deacetylase,HMMPfam_Hist_deacetyl	-	no_errors
TCF20	6942	genome.wustl.edu	36	22	40940697	40940697	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	22	40940697	40940697	G	A	SNP	TCF20	NM_005650	human	genbank	54_36p	-1	reviewed	missense	c.559	p.L187F	1.000	NULL	HMMSmart_SM00249	-	no_errors
C6	729	genome.wustl.edu	36	5	41189735	41189735	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	5	41189735	41189735	A	T	SNP	C6	NM_000065	human	genbank	54_36p	-1	reviewed	missense	c.2224	p.S742T	0.179	superfamily_Complement_control_module,HMMPfam_Sushi,HMMSmart_CCP	PatternScan_EGF_2,superfamily_TSP1,HMMSmart_TSP1,HMMPfam_TSP_1,superfamily_LDL_rcpt_classA_cys-rich,HMMPfam_Ldl_recept_a,HMMSmart_LDLa,PatternScan_LDLRA_1,HMMPfam_MACPF,HMMSmart_MACPF,PatternScan_MAC_PERFORIN,PatternScan_EGF_1,superfamily_Complement_control_module,HMMPfam_Sushi,HMMSmart_CCP,HMMSmart_FIMAC,HMMSmart_KAZAL,HMMPfam_Kazal_2	-	no_errors
ZFP14	57677	genome.wustl.edu	36	19	41523477	41523477	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	19	41523477	41523477	C	G	SNP	ZFP14	NM_020917	human	genbank	54_36p	-1	provisional	missense	c.1091	p.G364A	0.980	superfamily_SSF57667	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
LOC343515	343515	genome.wustl.edu	36	1	43142149	43142149	+	RNA	SNP	C	C	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	1	43142149	43142149	C	G	SNP	LOC343515	XR_017310	human	genbank	54_36p	+1	model	rna	NULL	NULL	0.968	-	-	-	pseudogene
TP53TG5	27296	genome.wustl.edu	36	20	43439643	43439643	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	20	43439643	43439643	C	G	SNP	TP53TG5	NM_014477	human	genbank	54_36p	-1	validated	missense	c.73	p.E25Q	0.016	NULL	NULL	-	no_errors
NNT	23530	genome.wustl.edu	36	5	43695120	43695120	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	5	43695120	43695120	G	T	SNP	NNT	NM_012343	human	genbank	54_36p	+1	reviewed	nonsense	c.2545	p.E849*	0.999	HMMPfam_PNTB	superfamily_SSF52283,PatternScan_ALADH_PNT_1,HMMPfam_AlaDh_PNT_N,superfamily_NAD(P)-bd,HMMPfam_AlaDh_PNT_C,PatternScan_ALADH_PNT_2,HMMPfam_PNTB,superfamily_SSF52467	-	no_errors
ZSWIM3	140831	genome.wustl.edu	36	20	43919952	43919952	+	Silent	SNP	C	C	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	20	43919952	43919952	C	T	SNP	ZSWIM3	NM_080752	human	genbank	54_36p	+1	validated	silent	c.81	p.S27	1.000	NULL	HMMPfam_MULE,HMMPfam_SWIM,HMMSmart_ZnF_PMZ	-	no_errors
NFKBIB	4793	genome.wustl.edu	36	19	44091220	44091220	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	19	44091220	44091220	G	T	SNP	NFKBIB	NM_002503	human	genbank	54_36p	+1	validated	missense	c.979	p.D327Y	0.996	NULL	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank	-	no_errors
TRPM2	7226	genome.wustl.edu	36	21	44613609	44613609	+	Silent	SNP	C	C	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	21	44613609	44613609	C	T	SNP	TRPM2	NM_003307	human	genbank	54_36p	+1	reviewed	silent	c.726	p.A242	1.000	NULL	HMMPfam_Ion_trans,PatternScan_CHITINASE_18,superfamily_Nudix	-	no_errors
TRPM2	7226	genome.wustl.edu	36	21	44622067	44622067	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	21	44622067	44622067	G	A	SNP	TRPM2	NM_003307	human	genbank	54_36p	+1	reviewed	missense	c.997	p.G333S	0.998	NULL	PatternScan_CHITINASE_18,HMMPfam_Ion_trans,superfamily_Nudix	-	no_errors
COL1A1	1277	genome.wustl.edu	36	17	45619223	45619223	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	17	45619223	45619223	G	C	SNP	COL1A1	NM_000088	human	genbank	54_36p	-1	reviewed	missense	c.3591	p.D1197E	1.000	NULL	HMMPfam_VWC,HMMSmart_SM00214,PatternScan_VWFC_1,HMMPfam_Collagen,HMMSmart_SM00038,HMMPfam_COLFI	-	no_errors
TDRD6	221400	genome.wustl.edu	36	6	46765462	46765462	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	6	46765462	46765462	G	T	SNP	TDRD6	NM_001010870	human	genbank	54_36p	+1	provisional	missense	c.1638	p.K546N	0.868	HMMPfam_TUDOR,superfamily_SSF63748,HMMSmart_TUDOR	HMMSmart_TUDOR,HMMPfam_TUDOR,superfamily_SSF63748	-	no_errors
SOCS5	9655	genome.wustl.edu	36	2	46839863	46839863	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	2	46839863	46839863	G	A	SNP	SOCS5	NM_014011	human	genbank	54_36p	+1	reviewed	nonsense	c.690	p.W230*	1.000	NULL	superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2,HMMSmart_SM00253,HMMPfam_SOCS_box	-	no_errors
PRMT2	3275	genome.wustl.edu	36	21	46905184	46905184	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	21	46905184	46905184	T	G	SNP	PRMT2	NM_001535	human	genbank	54_36p	+1	validated	missense	c.842	p.V281G	0.990	superfamily_S-adenosyl-L-methionine-dependent methyltransferases	superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_MTS	-	no_errors
PTH1R	5745	genome.wustl.edu	36	3	46919900	46919900	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	3	46919900	46919900	G	A	SNP	PTH1R	NM_000316	human	genbank	54_36p	+1	reviewed	missense	c.1532	p.R511H	0.940	NULL	superfamily_SSF111418,HMMSmart_HormR,HMMPfam_HRM,PatternScan_G_PROTEIN_RECEP_F2_1,superfamily_SSF81321,HMMPfam_7tm_2,PatternScan_G_PROTEIN_RECEP_F2_2	-	no_errors
ARHGEF1	9138	genome.wustl.edu	36	19	47088516	47088516	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	19	47088516	47088516	C	G	SNP	ARHGEF1	NM_199002	human	genbank	54_36p	+1	reviewed	missense	c.415	p.R139G	1.000	HMMPfam_RGS-like,superfamily_Regulat_G_prot_signal_superfam	HMMPfam_RGS-like,superfamily_Regulat_G_prot_signal_superfam,superfamily_DH-domain,HMMPfam_RhoGEF,HMMSmart_RhoGEF,superfamily_SSF50729,HMMSmart_PH	-	no_errors
TNFRSF21	27242	genome.wustl.edu	36	6	47362272	47362272	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	6	47362272	47362272	T	C	SNP	TNFRSF21	NM_014452	human	genbank	54_36p	-1	reviewed	missense	c.115	p.T39A	0.905	NULL	superfamily_SSF57586,HMMSmart_TNFR,PatternScan_TNFR_NGFR_1,HMMSmart_DEATH,superfamily_DEATH_like,HMMPfam_Death	-	no_errors
ELK1	2002	genome.wustl.edu	36	X	47382487	47382487	+	Silent	SNP	C	C	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	X	47382487	47382487	C	T	SNP	ELK1	NM_005229	human	genbank	54_36p	-1	reviewed	silent	c.693	p.S231	0.034	NULL	"superfamily_""Winged helix"" DNA-binding domain,HMMPfam_Ets,HMMSmart_SM00413,PatternScan_ETS_DOMAIN_1,PatternScan_ETS_DOMAIN_2"	-	no_errors
LOC643507	643507	genome.wustl.edu	36	X	47585979	47585979	+	RNA	SNP	A	A	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	X	47585979	47585979	A	T	SNP	LOC643507	XR_016898	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.996	-	-	-	pseudogene
OR4X2	119764	genome.wustl.edu	36	11	48224063	48224063	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	11	48224063	48224063	A	C	SNP	OR4X2	NM_001004727	human	genbank	54_36p	+1	provisional	missense	c.832	p.I278L	0.999	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	-	no_errors
SLC27A2	11001	genome.wustl.edu	36	15	48306511	48306511	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	15	48306511	48306511	C	T	SNP	SLC27A2	NM_003645	human	genbank	54_36p	+1	reviewed	missense	c.1301	p.P434L	1.000	superfamily_Acetyl-CoA synthetase-like,HMMPfam_AMP-binding	superfamily_Acetyl-CoA synthetase-like,HMMPfam_AMP-binding,PatternScan_AMP_BINDING	-	no_errors
TMEM89	440955	genome.wustl.edu	36	3	48633927	48633927	+	Silent	SNP	C	C	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	3	48633927	48633927	C	A	SNP	TMEM89	NM_001008269	human	genbank	54_36p	-1	provisional	silent	c.267	p.R89	0.003	NULL	NULL	-	no_errors
PPP1R3F	89801	genome.wustl.edu	36	X	49029405	49029405	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	X	49029405	49029405	C	A	SNP	PPP1R3F	NM_033215	human	genbank	54_36p	+1	validated	missense	c.1309	p.P437T	0.708	NULL	HMMPfam_CBM_21	-	no_errors
SAPS2	9701	genome.wustl.edu	36	22	49216677	49216677	+	Silent	SNP	C	C	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	22	49216677	49216677	C	T	SNP	SAPS2	NM_014678	human	genbank	54_36p	+1	validated	silent	c.1335	p.H445	1.000	HMMPfam_SAPS	HMMPfam_SAPS	-	no_errors
ENSG00000205034	0	genome.wustl.edu	36	11	49853086	49853086	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	11	49853086	49853086	T	C	SNP	ENSG00000205034	ENST00000334042	human	ensembl	54_36p	+1	known	missense	c.146	p.L49P	0.942	NULL	NULL	-	no_start_codon:no_stop_codon
SNTG1	54212	genome.wustl.edu	36	8	51513708	51513708	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	8	51513708	51513708	T	C	SNP	SNTG1	NM_018967	human	genbank	54_36p	+1	reviewed	missense	c.215	p.I72T	1.000	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,HMMSmart_SM00233,superfamily_PH domain-like	-	no_errors
PCBP2	5094	genome.wustl.edu	36	12	52147334	52147334	+	Silent	SNP	C	C	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	12	52147334	52147334	C	T	SNP	PCBP2	NM_005016	human	genbank	54_36p	+1	reviewed	silent	c.789	p.T263	1.000	NULL	HMMSmart_KH,superfamily_SSF54791,HMMPfam_KH_1	-	no_errors
NTF6B	0	genome.wustl.edu	36	19	54233691	54233691	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	19	54233691	54233691	C	G	SNP	NTF6B	ENST00000391533	human	ensembl	54_36p	-1	known	missense	c.631	p.G211R	0.382	superfamily_SSF57501,HMMPfam_NGF,HMMSmart_NGF	superfamily_SSF57501,HMMPfam_NGF,HMMSmart_NGF	-	no_start_codon
MAGED2	10916	genome.wustl.edu	36	X	54852891	54852891	+	Silent	SNP	A	A	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	X	54852891	54852891	A	T	SNP	MAGED2	NM_014599	human	genbank	54_36p	+1	reviewed	silent	c.57	p.S19	1.000	NULL	HMMPfam_MAGE	-	no_errors
FAM83B	222584	genome.wustl.edu	36	6	54912707	54912707	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	6	54912707	54912707	G	T	SNP	FAM83B	NM_001010872	human	genbank	54_36p	+1	validated	missense	c.979	p.D327Y	1.000	NULL	HMMPfam_DUF1669,superfamily_SSF56024	-	no_errors
OR8H3	390152	genome.wustl.edu	36	11	55646655	55646655	+	Silent	SNP	C	C	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	11	55646655	55646655	C	A	SNP	OR8H3	NM_001005201	human	genbank	54_36p	+1	provisional	silent	c.231	p.V77	0.000	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
OR8H1	219469	genome.wustl.edu	36	11	55815089	55815089	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	11	55815089	55815089	A	G	SNP	OR8H1	NM_001005199	human	genbank	54_36p	-1	provisional	missense	c.26	p.V9A	0.010	superfamily_Family A G protein-coupled receptor-like	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
KIF5A	3798	genome.wustl.edu	36	12	56252170	56252170	+	Silent	SNP	A	A	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	12	56252170	56252170	A	G	SNP	KIF5A	NM_004984	human	genbank	54_36p	+1	reviewed	silent	c.1422	p.Q474	0.988	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00129,HMMPfam_Kinesin,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_Prefoldin	-	no_errors
PPAT	5471	genome.wustl.edu	36	4	56956292	56956292	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	4	56956292	56956292	C	G	SNP	PPAT	NM_002703	human	genbank	54_36p	-1	reviewed	missense	c.1537	p.V513L	1.000	superfamily_PRTase-like	HMMPfam_GATase_2,superfamily_N-terminal nucleophile aminohydrolases (Ntn hydrolases),superfamily_PRTase-like,HMMPfam_Pribosyltran	-	no_errors
TMX2	51075	genome.wustl.edu	36	11	57262015	57262015	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	11	57262015	57262015	C	G	SNP	TMX2	NM_015959	human	genbank	54_36p	+1	validated	missense	c.305	p.T102R	0.982	NULL	superfamily_Thioredoxin-like,HMMPfam_Thioredoxin	-	no_errors
GLYATL1	92292	genome.wustl.edu	36	11	58479690	58479690	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	11	58479690	58479690	G	T	SNP	GLYATL1	NM_080661	human	genbank	54_36p	+1	provisional	missense	c.616	p.D206Y	0.024	HMMPfam_Gly_acyl_tr_N,superfamily_Acyl_CoA_acyltransferase	HMMPfam_Gly_acyl_tr_N,superfamily_Acyl_CoA_acyltransferase,HMMPfam_Gly_acyl_tr_C	-	no_errors
TANC2	26115	genome.wustl.edu	36	17	58852249	58852249	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	17	58852249	58852249	A	G	SNP	TANC2	NM_025185	human	genbank	54_36p	+1	validated	missense	c.5174	p.Y1725C	1.000	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00248,superfamily_Ankyrin repeat,HMMPfam_Ank,HMMSmart_SM00028,superfamily_TPR-like,HMMPfam_TPR_1	-	no_errors
CACNG6	59285	genome.wustl.edu	36	19	59194777	59194777	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	19	59194777	59194777	G	T	SNP	CACNG6	NM_145814	human	genbank	54_36p	+1	reviewed	missense	c.484	p.V162L	1.000	NULL	NULL	-	no_errors
LILRA4	23547	genome.wustl.edu	36	19	59541302	59541302	+	Silent	SNP	G	G	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	19	59541302	59541302	G	A	SNP	LILRA4	NM_012276	human	genbank	54_36p	-1	reviewed	silent	c.372	p.T124	0.045	superfamily_Immunoglobulin	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig	-	no_errors
ZSCAN4	201516	genome.wustl.edu	36	19	62882062	62882062	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	19	62882062	62882062	C	T	SNP	ZSCAN4	NM_152677	human	genbank	54_36p	+1	validated	missense	c.1279	p.P427S	0.001	NULL	HMMPfam_SCAN,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
SLC22A9	114571	genome.wustl.edu	36	11	62894443	62894443	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	11	62894443	62894443	G	T	SNP	SLC22A9	NM_080866	human	genbank	54_36p	+1	validated	missense	c.339	p.M113I	0.010	superfamily_MFS general substrate transporter	superfamily_MFS general substrate transporter,HMMPfam_MFS_1	-	no_errors
KIAA0984	23329	genome.wustl.edu	36	12	63523492	63523492	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	12	63523492	63523492	T	C	SNP	KIAA0984	XM_037557	human	genbank	54_36p	+1	model	missense	c.1487	p.M496T	1.000	superfamily_RabGAP_TBC	superfamily_RabGAP_TBC,HMMPfam_TBC,HMMSmart_TBC	-	no_errors
LOC649395	649395	genome.wustl.edu	36	7	63532055	63532055	+	RNA	SNP	G	G	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	7	63532055	63532055	G	A	SNP	LOC649395	XR_037228	human	genbank	54_36p	+1	model	rna	NULL	NULL	0.998	-	-	-	pseudogene
AR	367	genome.wustl.edu	36	X	66859543	66859543	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	X	66859543	66859543	G	C	SNP	AR	NM_000044	human	genbank	54_36p	+1	reviewed	missense	c.2599	p.V867L	1.000	superfamily_Nuclear receptor ligand-binding domain,HMMSmart_SM00430,HMMPfam_Hormone_recep	HMMPfam_Androgen_recep,HMMSmart_SM00399,HMMPfam_zf-C4,superfamily_Glucocorticoid receptor-like (DNA-binding domain),PatternScan_NUCLEAR_REC_DBD_1,superfamily_Nuclear receptor ligand-binding domain,HMMSmart_SM00430,HMMPfam_Hormone_recep	-	no_errors
SLC8A3	6547	genome.wustl.edu	36	14	69585360	69585360	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	14	69585360	69585360	T	C	SNP	SLC8A3	NM_183002	human	genbank	54_36p	-1	reviewed	missense	c.2284	p.I762V	1.000	NULL	HMMPfam_Na_Ca_ex,HMMSmart_SM00237,HMMPfam_Calx-beta	-	no_errors
LOC642590	642590	genome.wustl.edu	36	6	71375598	71375598	+	RNA	SNP	T	T	C	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	6	71375598	71375598	T	C	SNP	LOC642590	XR_016251	human	genbank	54_36p	-1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
TRIM50	135892	genome.wustl.edu	36	7	72365202	72365202	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	7	72365202	72365202	C	T	SNP	TRIM50	NM_178125	human	genbank	54_36p	-1	provisional	missense	c.1115	p.R372H	0.914	HMMPfam_SPRY,HMMSmart_SM00449	superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1,HMMPfam_zf-B_box,HMMSmart_SM00336,HMMSmart_SM00589,HMMPfam_SPRY,HMMSmart_SM00449	-	no_errors
GLIPR1L2	144321	genome.wustl.edu	36	12	74102969	74102969	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	12	74102969	74102969	A	C	SNP	GLIPR1L2	NM_152436	human	genbank	54_36p	+1	provisional	missense	c.603	p.R201S	0.944	superfamily_SCP-like_extracellular	superfamily_SCP-like_extracellular,HMMSmart_SCP,HMMPfam_SCP	-	no_errors
SALL3	27164	genome.wustl.edu	36	18	74854281	74854281	+	Silent	SNP	G	G	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	18	74854281	74854281	G	A	SNP	SALL3	NM_171999	human	genbank	54_36p	+1	validated	silent	c.1302	p.A434	0.999	HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,superfamily_C2H2 and C2HC zinc fingers	HMMSmart_SM00355,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
MAGEE1	57692	genome.wustl.edu	36	X	75566589	75566589	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	X	75566589	75566589	T	C	SNP	MAGEE1	NM_020932	human	genbank	54_36p	+1	validated	missense	c.1862	p.F621S	0.947	HMMPfam_MAGE	HMMPfam_MAGE	-	no_errors
C11orf30	56946	genome.wustl.edu	36	11	75934680	75934680	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	11	75934680	75934680	G	T	SNP	C11orf30	NM_020193	human	genbank	54_36p	+1	validated	missense	c.3465	p.M1155I	1.000	NULL	HMMPfam_ENT	-	no_errors
DTX2	113878	genome.wustl.edu	36	7	75972778	75972778	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	7	75972778	75972778	A	T	SNP	DTX2	NM_001102594	human	genbank	54_36p	+1	validated	missense	c.1793	p.D598V	1.000	NULL	HMMPfam_WWE,HMMSmart_SM00678,superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4	-	no_errors
ADNP2	22850	genome.wustl.edu	36	18	75995072	75995072	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	18	75995072	75995072	A	G	SNP	ADNP2	NM_014913	human	genbank	54_36p	+1	validated	missense	c.785	p.K262R	0.995	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Homeodomain-like,HMMSmart_SM00389	-	no_errors
KIAA1303	57521	genome.wustl.edu	36	17	76548546	76548546	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	17	76548546	76548546	G	C	SNP	KIAA1303	NM_020761	human	genbank	54_36p	+1	validated	missense	c.3551	p.G1184A	1.000	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	superfamily_ARM repeat,HMMPfam_HEAT,superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	-	no_errors
IMPG1	3617	genome.wustl.edu	36	6	76771805	76771805	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	6	76771805	76771805	C	G	SNP	IMPG1	NM_001563	human	genbank	54_36p	-1	provisional	missense	c.1054	p.A352P	0.002	NULL	superfamily_SSF82671,HMMPfam_SEA,HMMSmart_SEA	-	no_errors
BRWD3	254065	genome.wustl.edu	36	X	79819272	79819272	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	X	79819272	79819272	T	A	SNP	BRWD3	NM_153252	human	genbank	54_36p	-1	validated	missense	c.4901	p.D1634V	1.000	NULL	HMMSmart_SM00320,HMMPfam_WD40,superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase,PatternScan_WD_REPEATS_1,superfamily_Bromodomain,HMMSmart_SM00297,HMMPfam_Bromodomain	-	no_errors
ACSS3	79611	genome.wustl.edu	36	12	80171238	80171238	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	12	80171238	80171238	G	C	SNP	ACSS3	NM_024560	human	genbank	54_36p	+1	validated	missense	c.1741	p.V581L	1.000	superfamily_Acetyl-CoA synthetase-like,HMMPfam_AMP-binding	superfamily_Acetyl-CoA synthetase-like,HMMPfam_AMP-binding,PatternScan_AMP_BINDING	-	no_errors
KRT18P24	340460	genome.wustl.edu	36	9	80841902	80841902	+	RNA	SNP	A	A	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	9	80841902	80841902	A	T	SNP	KRT18P24	XR_016865	human	genbank	54_36p	-1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
SEL1L	6400	genome.wustl.edu	36	14	81063827	81063827	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	14	81063827	81063827	C	T	SNP	SEL1L	NM_005065	human	genbank	54_36p	-1	validated	missense	c.79	p.G27S	0.989	NULL	superfamily_Kringle-like,HMMSmart_SM00059,HMMPfam_fn2,PatternScan_FN2_1,HMMPfam_Sel1,HMMSmart_SM00671,superfamily_HCP-like	-	no_errors
CCDC90B	60492	genome.wustl.edu	36	11	82650625	82650625	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	11	82650625	82650625	C	G	SNP	CCDC90B	NM_021825	human	genbank	54_36p	-1	provisional	missense	c.741	p.L247F	1.000	HMMPfam_DUF1640	HMMPfam_DUF1640	-	no_errors
CD8B	926	genome.wustl.edu	36	2	86896285	86896285	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	2	86896285	86896285	T	C	SNP	CD8B	NM_172213	human	genbank	54_36p	-1	reviewed	missense	c.688	p.T230A	0.000	NULL	superfamily_SSF48726,HMMPfam_V-set,HMMSmart_IG	-	no_errors
PTPN21	11099	genome.wustl.edu	36	14	88015230	88015230	+	Silent	SNP	G	G	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	14	88015230	88015230	G	A	SNP	PTPN21	NM_007039	human	genbank	54_36p	-1	reviewed	silent	c.2298	p.D766	0.005	NULL	HMMSmart_SM00295,superfamily_Ubiquitin-like,HMMPfam_FERM_N,PatternScan_FERM_1,superfamily_Second domain of FERM,HMMPfam_FERM_M,PatternScan_FERM_2,superfamily_PH domain-like,HMMPfam_FERM_C,superfamily_(Phosphotyrosine protein) phosphatases II,HMMSmart_SM00194,HMMPfam_Y_phosphatase,HMMSmart_SM00404,PatternScan_TYR_PHOSPHATASE_1	-	no_errors
AFF1	4299	genome.wustl.edu	36	4	88245985	88245985	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	4	88245985	88245985	C	A	SNP	AFF1	NM_005935	human	genbank	54_36p	+1	validated	missense	c.1319	p.T440N	0.328	HMMPfam_AF-4	HMMPfam_AF-4	-	no_errors
LOC100130134	0	genome.wustl.edu	36	X	89181468	89181468	+	RNA	SNP	C	C	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	X	89181468	89181468	C	T	SNP	LOC100130134	XR_037810	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.917	-	-	-	pseudogene
LOC100131364	0	genome.wustl.edu	36	11	89656265	89656265	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	11	89656265	89656265	C	T	SNP	LOC100131364	XM_001725122	human	genbank	54_36p	-1	model	missense	c.133	p.D45N	1.000	NULL	NULL	-	no_errors
DECR1	1666	genome.wustl.edu	36	8	91126353	91126353	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	8	91126353	91126353	T	G	SNP	DECR1	NM_001359	human	genbank	54_36p	+1	reviewed	missense	c.839	p.L280R	1.000	superfamily_NAD(P)-bd	PatternScan_ADH_SHORT,superfamily_NAD(P)-bd,HMMPfam_adh_short	-	no_errors
GPC5	2262	genome.wustl.edu	36	13	91206651	91206651	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	13	91206651	91206651	G	A	SNP	GPC5	NM_004466	human	genbank	54_36p	+1	reviewed	nonsense	c.1256	p.W419*	1.000	HMMPfam_Glypican	HMMPfam_Glypican,PatternScan_GLYPICAN	-	no_errors
PHF2	5253	genome.wustl.edu	36	9	95478902	95478902	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	9	95478902	95478902	C	T	SNP	PHF2	NM_005392	human	genbank	54_36p	+1	reviewed	missense	c.3038	p.P1013L	0.970	NULL	superfamily_FYVE_PHD_ZnF,HMMSmart_PHD,HMMPfam_PHD,PatternScan_ZF_PHD_1,superfamily_SSF51197,HMMSmart_JmjC,HMMPfam_JmjC	-	no_errors
COPS6	10980	genome.wustl.edu	36	7	99527308	99527308	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	7	99527308	99527308	G	A	SNP	COPS6	NM_006833	human	genbank	54_36p	+1	reviewed	missense	c.944	p.R315Q	1.000	NULL	HMMPfam_Mov34,HMMSmart_SM00232	-	no_errors
HEMGN	55363	genome.wustl.edu	36	9	99732335	99732335	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	9	99732335	99732335	G	A	SNP	HEMGN	NM_018437	human	genbank	54_36p	-1	validated	missense	c.1163	p.T388I	0.797	NULL	NULL	-	no_errors
RNF149	284996	genome.wustl.edu	36	2	101271882	101271882	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	2	101271882	101271882	C	T	SNP	RNF149	NM_173647	human	genbank	54_36p	-1	provisional	missense	c.848	p.R283K	1.000	superfamily_SSF57850,HMMSmart_RING,HMMPfam_zf-C3HC4	PatternScan_ZF_RING_1,superfamily_SSF52025,HMMPfam_PA,superfamily_SSF57850,HMMSmart_RING,HMMPfam_zf-C3HC4	-	no_errors
LOC392713	392713	genome.wustl.edu	36	7	101766195	101766195	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	7	101766195	101766195	C	A	SNP	LOC392713	XM_001718158	human	genbank	54_36p	+1	model	missense	c.342	p.H114Q	0.986	superfamily_ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	superfamily_ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	-	pseudogene
NT5DC3	51559	genome.wustl.edu	36	12	102695740	102695740	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	12	102695740	102695740	C	A	SNP	NT5DC3	NM_001031701	human	genbank	54_36p	-1	validated	missense	c.1644	p.K548N	0.689	NULL	superfamily_HAD-like,HMMPfam_5_nucleotid	-	no_errors
POU3F3	5455	genome.wustl.edu	36	2	104839233	104839233	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	2	104839233	104839233	C	T	SNP	POU3F3	NM_006236	human	genbank	54_36p	+1	provisional	missense	c.833	p.A278V	1.000	NULL	HMMPfam_Pou,HMMSmart_POU,superfamily_Lambda_like_DNA,PatternScan_POU_1,PatternScan_POU_2,superfamily_Homeodomain_like,HMMSmart_HOX,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1	-	no_errors
RGPD3	653489	genome.wustl.edu	36	2	106407073	106407073	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	2	106407073	106407073	T	G	SNP	RGPD3	ENST00000304514	human	ensembl	54_36p	-1	known	missense	c.3782	p.D1261A	0.772	NULL	superfamily_SSF48452,HMMPfam_TPR_1,superfamily_SSF50729,HMMSmart_RanBD,HMMPfam_Ran_BP1,HMMPfam_GRIP,HMMSmart_Grip	-	no_errors
ZNF462	58499	genome.wustl.edu	36	9	108725588	108725588	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	9	108725588	108725588	G	T	SNP	ZNF462	NM_021224	human	genbank	54_36p	+1	validated	missense	c.103	p.D35Y	1.000	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_beta-sandwich domain of Sec23/24	-	no_errors
ATXN2	6311	genome.wustl.edu	36	12	110407475	110407475	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	12	110407475	110407475	G	T	SNP	ATXN2	NM_002973	human	genbank	54_36p	-1	reviewed	missense	c.2981	p.A994D	1.000	NULL	superfamily_Sm-like ribonucleoproteins,HMMPfam_LsmAD,HMMPfam_PAM2	-	no_errors
LRRN3	54674	genome.wustl.edu	36	7	110550112	110550112	+	Silent	SNP	C	C	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	7	110550112	110550112	C	T	SNP	LRRN3	NM_001099658	human	genbank	54_36p	+1	validated	silent	c.48	p.I16	1.000	NULL	superfamily_L domain-like,HMMSmart_SM00013,HMMSmart_SM00365,HMMSmart_SM00369,HMMPfam_LRR_1,HMMSmart_SM00082,HMMPfam_LRRCT,superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_fn3,superfamily_Fibronectin type III	-	no_errors
ARHGEF7	8874	genome.wustl.edu	36	13	110751828	110751828	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	13	110751828	110751828	G	T	SNP	ARHGEF7	NM_003899	human	genbank	54_36p	+1	reviewed	missense	c.1766	p.S589I	1.000	NULL	superfamily_SH3,HMMPfam_SH3_1,HMMSmart_SH3,superfamily_DH-domain,HMMPfam_RhoGEF,HMMSmart_RhoGEF,PatternScan_DH_1,superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH	-	no_errors
PTPN11	5781	genome.wustl.edu	36	12	111411290	111411290	+	Silent	SNP	A	A	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	12	111411290	111411290	A	T	SNP	PTPN11	NM_002834	human	genbank	54_36p	+1	reviewed	silent	c.1527	p.A509	0.868	superfamily_(Phosphotyrosine protein) phosphatases II,HMMSmart_SM00194,HMMPfam_Y_phosphatase,HMMSmart_SM00404	superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2,superfamily_(Phosphotyrosine protein) phosphatases II,HMMSmart_SM00194,HMMPfam_Y_phosphatase,HMMSmart_SM00404,PatternScan_TYR_PHOSPHATASE_1	-	no_errors
ALPK1	80216	genome.wustl.edu	36	4	113523139	113523139	+	Silent	SNP	C	C	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	4	113523139	113523139	C	T	SNP	ALPK1	NM_001102406	human	genbank	54_36p	+1	validated	silent	c.258	p.A86	0.988	NULL	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00811,HMMPfam_Alpha_kinase	-	no_errors
HS3ST5	222537	genome.wustl.edu	36	6	114485237	114485237	+	Silent	SNP	C	C	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	6	114485237	114485237	C	T	SNP	HS3ST5	NM_153612	human	genbank	54_36p	-1	validated	silent	c.918	p.A306	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Sulfotransfer_1	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Sulfotransfer_1	-	no_errors
TNC	3371	genome.wustl.edu	36	9	116866127	116866127	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	9	116866127	116866127	C	G	SNP	TNC	NM_002160	human	genbank	54_36p	-1	validated	missense	c.3529	p.G1177R	0.996	HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like	PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_EGF,HMMPfam_EGF_2,HMMPfam_EGF,HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like,HMMSmart_FBG,HMMPfam_Fibrinogen_C,superfamily_Fibrinogen_a/b/g_C	-	no_errors
RFC5	5985	genome.wustl.edu	36	12	116941272	116941272	+	Silent	SNP	C	C	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	12	116941272	116941272	C	T	SNP	RFC5	NM_007370	human	genbank	54_36p	+1	reviewed	silent	c.78	p.Y26	1.000	NULL	superfamily_SSF52540,HMMSmart_AAA,HMMPfam_AAA,HMMPfam_Rep_fac_C,superfamily_Pol_clamp_load_C	-	no_errors
SPPL3	121665	genome.wustl.edu	36	12	119687204	119687204	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	12	119687204	119687204	G	A	SNP	SPPL3	NM_139015	human	genbank	54_36p	-1	validated	missense	c.1136	p.S379F	1.000	NULL	HMMPfam_Peptidase_A22B,HMMSmart_SM00730	-	no_errors
HSD3B1	3283	genome.wustl.edu	36	1	119851725	119851725	+	Silent	SNP	T	T	C	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	1	119851725	119851725	T	C	SNP	HSD3B1	NM_000862	human	genbank	54_36p	+1	validated	silent	c.103	p.L35	0.379	superfamily_NAD(P)-bd,HMMPfam_3Beta_HSD	superfamily_NAD(P)-bd,HMMPfam_3Beta_HSD	-	no_errors
SORL1	6653	genome.wustl.edu	36	11	120854149	120854149	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	11	120854149	120854149	C	G	SNP	SORL1	NM_003105	human	genbank	54_36p	+1	reviewed	missense	c.515	p.A172G	0.902	superfamily_Oligoxyloglucan reducing end-specific cellobiohydrolase,HMMSmart_SM00602	superfamily_Oligoxyloglucan reducing end-specific cellobiohydrolase,HMMSmart_SM00602,superfamily_YWTD domain,HMMSmart_SM00135,HMMPfam_Ldl_recept_b,PatternScan_EGF_2,superfamily_LDL receptor-like module,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,PatternScan_COPPER_BLUE,superfamily_Fibronectin type III,HMMPfam_fn3,HMMSmart_SM00060	-	no_errors
SLC41A3	54946	genome.wustl.edu	36	3	127208746	127208746	+	Silent	SNP	G	G	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	3	127208746	127208746	G	A	SNP	SLC41A3	NM_001008485	human	genbank	54_36p	-1	validated	silent	c.1267	p.L423	0.996	NULL	HMMPfam_MgtE,PatternScan_PEROXIDASE_2	-	no_errors
BIN1	274	genome.wustl.edu	36	2	127542232	127542232	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	2	127542232	127542232	G	C	SNP	BIN1	NM_139343	human	genbank	54_36p	-1	reviewed	missense	c.589	p.Q197E	1.000	HMMSmart_SM00721,HMMPfam_BAR	HMMSmart_SM00721,HMMPfam_BAR,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326	-	no_errors
XPNPEP2	7512	genome.wustl.edu	36	X	128729340	128729340	+	Silent	SNP	T	T	C	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	X	128729340	128729340	T	C	SNP	XPNPEP2	NM_003399	human	genbank	54_36p	+1	reviewed	silent	c.1821	p.S607	0.547	superfamily_Peptidase_M24_cat_core	superfamily_SSF53092,HMMPfam_Creatinase_N,superfamily_Peptidase_M24_cat_core,HMMPfam_Peptidase_M24,PatternScan_PROLINE_PEPTIDASE	-	no_errors
LOC100128615	0	genome.wustl.edu	36	3	130049773	130049773	+	Silent	SNP	G	C	C	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	3	130049773	130049773	G	C	SNP	LOC100128615	XM_001717892	human	genbank	54_36p	-1	model	silent	c.1317	p.A439	0.021	HMMSmart_SM00220	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase associated domain 1 KA1	-	no_errors
SAMD3	154075	genome.wustl.edu	36	6	130578054	130578054	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	6	130578054	130578054	C	A	SNP	SAMD3	NM_001017373	human	genbank	54_36p	-1	validated	nonsense	c.58	p.E20*	1.000	superfamily_SAM/Pointed domain,HMMSmart_SM00454,HMMPfam_SAM_1	superfamily_SAM/Pointed domain,HMMSmart_SM00454,HMMPfam_SAM_1	-	no_errors
ATP2C1	27032	genome.wustl.edu	36	3	132165539	132165539	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	3	132165539	132165539	A	T	SNP	ATP2C1	NM_001001486	human	genbank	54_36p	+1	reviewed	missense	c.934	p.I312F	1.000	superfamily_Calcium ATPase transmembrane domain M,HMMPfam_E1-E2_ATPase	HMMPfam_Cation_ATPase_N,superfamily_Calcium ATPase transmembrane domain M,HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A,superfamily_HAD-like,HMMPfam_Hydrolase,PatternScan_ATPASE_E1_E2,superfamily_Metal cation-transporting ATPase ATP-binding domain N,HMMPfam_Cation_ATPase_C	-	no_errors
NACC2	138151	genome.wustl.edu	36	9	138043637	138043637	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	9	138043637	138043637	G	T	SNP	NACC2	NM_144653	human	genbank	54_36p	-1	validated	missense	c.1310	p.A437D	0.987	HMMPfam_BEN	superfamily_BTB/POZ_fold,HMMPfam_BTB,HMMSmart_BTB,HMMPfam_BEN	-	no_errors
FAM62C	83850	genome.wustl.edu	36	3	139656766	139656766	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	3	139656766	139656766	A	G	SNP	FAM62C	NM_031913	human	genbank	54_36p	+1	validated	missense	c.410	p.E137G	1.000	NULL	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2	-	no_errors
EHMT1	79813	genome.wustl.edu	36	9	139827761	139827761	+	Silent	SNP	G	G	C	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	9	139827761	139827761	G	C	SNP	EHMT1	NM_024757	human	genbank	54_36p	+1	reviewed	silent	c.3045	p.V1015	1.000	superfamily_SET domain,HMMSmart_SM00468,HMMPfam_Pre-SET	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank,superfamily_SET domain,HMMSmart_SM00468,HMMPfam_Pre-SET,HMMPfam_SET,HMMSmart_SM00317	-	no_errors
PIK3CB	5291	genome.wustl.edu	36	3	139896378	139896378	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	3	139896378	139896378	T	A	SNP	PIK3CB	NM_006219	human	genbank	54_36p	-1	provisional	missense	c.1832	p.D611V	1.000	superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka	HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_SSF54236,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMSmart_PI3K_C2,superfamily_C2_CaLB,HMMPfam_PI3K_C2,superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka,superfamily_Kinase_like,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors
PCDHB4	56131	genome.wustl.edu	36	5	140483395	140483395	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	5	140483395	140483395	C	T	SNP	PCDHB4	NM_018938	human	genbank	54_36p	+1	reviewed	missense	c.1631	p.A544V	0.969	superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA	HMMPfam_Cadherin_2,superfamily_Cadherin,PatternScan_CADHERIN_1,HMMPfam_Cadherin,HMMSmart_CA	-	no_errors
GLI4	2738	genome.wustl.edu	36	8	144428372	144428372	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	8	144428372	144428372	G	A	SNP	GLI4	ENST00000344692	human	ensembl	54_36p	+1	known	nonsense	c.17	p.W6*	0.000	NULL	HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_start_codon:no_stop_codon
ZNF623	9831	genome.wustl.edu	36	8	144803667	144803667	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	8	144803667	144803667	G	T	SNP	ZNF623	NM_014789	human	genbank	54_36p	+1	validated	missense	c.482	p.G161V	0.005	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
HMGB3	3149	genome.wustl.edu	36	X	149905302	149905302	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	X	149905302	149905302	A	T	SNP	HMGB3	NM_005342	human	genbank	54_36p	+1	validated	missense	c.271	p.N91Y	1.000	superfamily_HMG-box	superfamily_HMG-box,HMMPfam_HMG_box,HMMSmart_HMG,PatternScan_HMG_BOX_1	-	no_errors
MAGEA4	4103	genome.wustl.edu	36	X	150843244	150843244	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	X	150843244	150843244	T	A	SNP	MAGEA4	NM_001011548	human	genbank	54_36p	+1	reviewed	missense	c.452	p.I151N	0.069	HMMPfam_MAGE	HMMPfam_MAGE	-	no_errors
ARHGAP4	393	genome.wustl.edu	36	X	152828562	152828562	+	Silent	SNP	C	C	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	X	152828562	152828562	C	G	SNP	ARHGAP4	NM_001666	human	genbank	54_36p	-1	validated	silent	c.2241	p.G747	0.020	superfamily_SH3	HMMPfam_FCH,HMMSmart_FCH,superfamily_Rho_GAP,HMMSmart_RhoGAP,HMMPfam_RhoGAP,superfamily_SH3,HMMPfam_SH3_1,HMMSmart_SH3	-	no_errors
ADAM15	8751	genome.wustl.edu	36	1	153295526	153295526	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	1	153295526	153295526	C	G	SNP	ADAM15	NM_207197	human	genbank	54_36p	+1	reviewed	missense	c.955	p.Q319E	0.998	"superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Reprolysin"	"HMMPfam_Pep_M12B_propep,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Reprolysin,HMMPfam_Disintegrin,HMMSmart_SM00050,superfamily_Blood coagulation inhibitor (disintegrin),HMMSmart_SM00608,HMMPfam_ADAM_CR,HMMPfam_EGF_2,PatternScan_EGF_2"	-	no_errors
FAM114A2	10827	genome.wustl.edu	36	5	153352738	153352738	+	Silent	SNP	T	T	C	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	5	153352738	153352738	T	C	SNP	FAM114A2	NM_018691	human	genbank	54_36p	-1	validated	silent	c.1509	p.L503	0.000	NULL	HMMPfam_DUF719	-	no_errors
FAM62B	57488	genome.wustl.edu	36	7	158219699	158219699	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	7	158219699	158219699	T	A	SNP	FAM62B	NM_020728	human	genbank	54_36p	-1	validated	missense	c.2642	p.D881V	1.000	superfamily_C2_CaLB	superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_C2	-	no_errors
FCGR3B	2215	genome.wustl.edu	36	1	159862600	159862600	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	1	159862600	159862600	T	G	SNP	FCGR3B	NM_000570	human	genbank	54_36p	-1	validated	missense	c.536	p.K179T	0.000	superfamily_Immunoglobulin,HMMSmart_SM00409	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMPfam_ig	-	no_errors
LPA	4018	genome.wustl.edu	36	6	160947632	160947632	+	Silent	SNP	A	A	C	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	6	160947632	160947632	A	C	SNP	LPA	NM_005577	human	genbank	54_36p	-1	validated	silent	c.2652	p.P884	0.421	superfamily_Kringle-like,HMMSmart_SM00130,HMMPfam_Kringle,PatternScan_KRINGLE_1	superfamily_Kringle-like,HMMSmart_SM00130,HMMPfam_Kringle,PatternScan_KRINGLE_1,superfamily_Trypsin-like serine proteases,HMMSmart_SM00020,HMMPfam_Trypsin,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	-	no_errors
SLC9A11	284525	genome.wustl.edu	36	1	171819361	171819361	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	1	171819361	171819361	G	C	SNP	SLC9A11	NM_178527	human	genbank	54_36p	-1	validated	missense	c.547	p.L183V	0.202	HMMPfam_Na_H_Exchanger	PatternScan_CNMP_BINDING_1,PatternScan_CNMP_BINDING_2,HMMPfam_Na_H_Exchanger,HMMPfam_Ion_trans,HMMSmart_cNMP,superfamily_cNMP_binding,HMMPfam_cNMP_binding	-	no_errors
COL5A2	1290	genome.wustl.edu	36	2	189608049	189608049	+	Silent	SNP	G	G	C	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	2	189608049	189608049	G	C	SNP	COL5A2	NM_000393	human	genbank	54_36p	-1	reviewed	silent	c.4191	p.A1397	0.914	HMMSmart_COLFI,HMMPfam_COLFI	HMMPfam_VWC,HMMSmart_VWC,PatternScan_VWFC_1,HMMPfam_Collagen,HMMSmart_COLFI,HMMPfam_COLFI	-	no_errors
MUC20	200958	genome.wustl.edu	36	3	196938476	196938476	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	3	196938476	196938476	T	C	SNP	MUC20	NM_152673	human	genbank	54_36p	+1	reviewed	missense	c.818	p.L273P	0.000	NULL	NULL	-	no_errors
REN	5972	genome.wustl.edu	36	1	202390792	202390792	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	1	202390792	202390792	C	T	SNP	REN	NM_000537	human	genbank	54_36p	-1	reviewed	missense	c.1196	p.R399H	1.000	superfamily_Acid proteases,HMMPfam_Asp	superfamily_Acid proteases,HMMPfam_A1_Propeptide,HMMPfam_Asp,PatternScan_ASP_PROTEASE	-	no_errors
PARD3B	117583	genome.wustl.edu	36	2	205694655	205694655	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	2	205694655	205694655	T	C	SNP	PARD3B	NM_152526	human	genbank	54_36p	+1	validated	missense	c.902	p.I301T	0.999	superfamily_PDZ	superfamily_PDZ,HMMSmart_PDZ,HMMPfam_PDZ	-	no_errors
CABC1	56997	genome.wustl.edu	36	1	225236412	225236412	+	Silent	SNP	G	G	C	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	1	225236412	225236412	G	C	SNP	CABC1	NM_020247	human	genbank	54_36p	+1	reviewed	silent	c.792	p.V264	0.985	NULL	HMMPfam_ABC1,superfamily_Protein kinase-like (PK-like)	-	no_errors
URB2	9816	genome.wustl.edu	36	1	227839180	227839180	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	1	227839180	227839180	C	T	SNP	URB2	NM_014777	human	genbank	54_36p	+1	provisional	missense	c.2197	p.L733F	0.000	NULL	HMMPfam_Urb2	-	no_errors
SH3BP4	23677	genome.wustl.edu	36	2	235615745	235615745	+	Silent	SNP	G	G	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	2	235615745	235615745	G	A	SNP	SH3BP4	NM_014521	human	genbank	54_36p	+1	reviewed	silent	c.1593	p.L531	0.766	NULL	superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,HMMPfam_SH3_2	-	no_errors
MAP1LC3C	440738	genome.wustl.edu	36	1	240228882	240228882	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-13-2057-01A-02D-1526-09	TCGA-13-2057-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	e2da306d-5b3b-40dc-bcf2-85c2cdf48a4c	0440ebfb-764d-448f-9bba-e7a42e7fac80	1	240228882	240228882	T	A	SNP	MAP1LC3C	NM_001004343	human	genbank	54_36p	-1	validated	missense	c.52	p.S18C	1.000	superfamily_SSF54236	superfamily_SSF54236,HMMPfam_MAP1_LC3	-	no_errors
