Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error
PIGG	54872	genome.wustl.edu	36	4	505720	505720	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	4	505720	505720	C	A	SNP	PIGG	NM_017733	human	genbank	54_36p	+1	validated	missense	c.1580	p.T527N	0.000	NULL	superfamily_Alkaline_phosphatase_core	-	no_errors
APC2	10297	genome.wustl.edu	36	19	1418803	1418803	+	Silent	SNP	C	T	T	rs61749994	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	19	1418803	1418803	C	T	SNP	APC2	NM_005883	human	genbank	54_36p	+1	validated	silent	c.4503	p.P1501	1.000	NULL	superfamily_ARM repeat,HMMSmart_SM00185,HMMPfam_Arm,PatternScan_CYSTEINE_SWITCH,HMMPfam_APC_crr,HMMPfam_SAMP,HMMPfam_APC_basic	-	no_errors
REXO1	57455	genome.wustl.edu	36	19	1778427	1778427	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	19	1778427	1778427	G	C	SNP	REXO1	NM_020695	human	genbank	54_36p	-1	validated	missense	c.1361	p.P454R	0.003	NULL	superfamily_Ribonuclease H-like,HMMSmart_SM00479,HMMPfam_Exonuc_X-T	-	no_errors
SLC4A11	83959	genome.wustl.edu	36	20	3157863	3157863	+	Silent	SNP	C	C	T	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	20	3157863	3157863	C	T	SNP	SLC4A11	NM_032034	human	genbank	54_36p	-1	validated	silent	c.1944	p.A648	0.991	HMMPfam_HCO3_cotransp	superfamily_Phoshotransferase/anion transport protein,HMMPfam_HCO3_cotransp	-	no_errors
PLD2	5338	genome.wustl.edu	36	17	4664759	4664759	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	17	4664759	4664759	G	T	SNP	PLD2	NM_002663	human	genbank	54_36p	+1	validated	missense	c.1091	p.W364L	1.000	superfamily_Phospholipase D/nuclease	superfamily_PX domain,HMMPfam_PX,HMMSmart_SM00312,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_Phospholipase D/nuclease,HMMPfam_PLDc,HMMSmart_SM00155	-	no_errors
FAM90A20	728430	genome.wustl.edu	36	8	7142168	7142168	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	8	7142168	7142168	C	G	SNP	FAM90A20	XM_001128051	human	genbank	54_36p	+1	model	missense	c.607	p.Q203E	0.004	NULL	NULL	-	no_errors
ENSG00000215372	0	genome.wustl.edu	36	8	7203207	7203207	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	8	7203207	7203207	A	T	SNP	ENSG00000215372	ENST00000400156	human	ensembl	54_36p	-1	known	missense	c.610	p.C204S	0.881	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	HMMPfam_KRAB,superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
TP53	7157	genome.wustl.edu	36	17	7518996	7518996	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	17	7518996	7518996	T	C	SNP	TP53	NM_000546	human	genbank	54_36p	-1	reviewed	missense	c.578	p.H193R	1.000	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors
FBN3	84467	genome.wustl.edu	36	19	8051917	8051917	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	19	8051917	8051917	C	T	SNP	FBN3	NM_032447	human	genbank	54_36p	-1	reviewed	missense	c.7423	p.G2475S	0.996	superfamily_Growth factor receptor domain,HMMPfam_EGF_CA,HMMSmart_SM00179,HMMSmart_SM00181,PatternScan_EGF_2	HMMSmart_SM00181,superfamily_EGF/Laminin,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_TB module/8-cys domain,HMMPfam_TB,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_SM00179,PatternScan_ASX_HYDROXYL,HMMPfam_EGF,superfamily_Growth factor receptor domain	-	no_errors
GATA3	2625	genome.wustl.edu	36	10	8155883	8155883	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	10	8155883	8155883	C	A	SNP	GATA3	NM_001002295	human	genbank	54_36p	+1	validated	missense	c.1226	p.P409H	0.995	NULL	superfamily_Glucocorticoid receptor-like (DNA-binding domain),HMMSmart_SM00401,PatternScan_GATA_ZN_FINGER_1,HMMPfam_GATA	-	no_errors
ZNF653	115950	genome.wustl.edu	36	19	11458973	11458973	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	19	11458973	11458973	T	C	SNP	ZNF653	NM_138783	human	genbank	54_36p	-1	provisional	missense	c.1172	p.E391G	0.998	NULL	HMMSmart_AT_hook,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_SSF57667	-	no_errors
ZNF442	79973	genome.wustl.edu	36	19	12323103	12323103	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	19	12323103	12323103	C	A	SNP	ZNF442	NM_030824	human	genbank	54_36p	-1	validated	missense	c.296	p.S99I	0.001	NULL	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
TYRP1	7306	genome.wustl.edu	36	9	12684227	12684227	+	Silent	SNP	T	T	C	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	9	12684227	12684227	T	C	SNP	TYRP1	NM_000550	human	genbank	54_36p	+1	reviewed	silent	c.231	p.P77	0.994	NULL	superfamily_Di-copper_centre,HMMPfam_Tyrosinase,PatternScan_TYROSINASE_1,PatternScan_TYROSINASE_2	-	no_errors
SIRT5	23408	genome.wustl.edu	36	6	13709069	13709069	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	6	13709069	13709069	C	G	SNP	SIRT5	NM_012241	human	genbank	54_36p	+1	reviewed	missense	c.766	p.P256A	1.000	superfamily_DHS-like NAD/FAD-binding domain,HMMPfam_SIR2	superfamily_DHS-like NAD/FAD-binding domain,HMMPfam_SIR2	-	no_errors
TUBA8	51807	genome.wustl.edu	36	22	16989613	16989613	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	22	16989613	16989613	G	A	SNP	TUBA8	NM_018943	human	genbank	54_36p	+1	provisional	missense	c.868	p.E290K	1.000	superfamily_Tubulin C-terminal domain-like,HMMPfam_Tubulin_C	superfamily_Tubulin nucleotide-binding domain-like,HMMPfam_Tubulin,PatternScan_TUBULIN,superfamily_Tubulin C-terminal domain-like,HMMPfam_Tubulin_C	-	no_errors
MRGPRX3	117195	genome.wustl.edu	36	11	18115510	18115510	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	11	18115510	18115510	C	A	SNP	MRGPRX3	NM_054031	human	genbank	54_36p	+1	provisional	missense	c.185	p.S62Y	0.945	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
NRSN1	140767	genome.wustl.edu	36	6	24253886	24253886	+	Silent	SNP	G	G	A	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	6	24253886	24253886	G	A	SNP	NRSN1	NM_080723	human	genbank	54_36p	+1	validated	silent	c.321	p.Q107	1.000	NULL	NULL	-	no_errors
RAB10	10890	genome.wustl.edu	36	2	26186170	26186170	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	2	26186170	26186170	C	G	SNP	RAB10	NM_016131	human	genbank	54_36p	+1	provisional	missense	c.218	p.T73S	1.000	HMMSmart_SM00177,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00173,HMMSmart_SM00175,HMMPfam_Ras,HMMSmart_SM00174,HMMSmart_SM00176	HMMSmart_SM00177,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00173,HMMSmart_SM00175,HMMPfam_Ras,PatternScan_SIGMA54_INTERACT_1,HMMSmart_SM00174,HMMSmart_SM00176	-	no_errors
HIST1H2BI	8346	genome.wustl.edu	36	6	26381420	26381420	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	6	26381420	26381420	C	T	SNP	HIST1H2BI	NM_003525	human	genbank	54_36p	+1	reviewed	missense	c.238	p.R80C	1.000	superfamily_Histone-fold,HMMSmart_SM00427,HMMPfam_Histone	superfamily_Histone-fold,HMMSmart_SM00427,HMMPfam_Histone,PatternScan_HISTONE_H2B	-	no_errors
GCKR	2646	genome.wustl.edu	36	2	27582927	27582927	+	Silent	SNP	C	C	G	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	2	27582927	27582927	C	G	SNP	GCKR	NM_001486	human	genbank	54_36p	+1	reviewed	silent	c.945	p.T315	0.134	superfamily_SIS domain	superfamily_SIS domain,PatternScan_GCKR	-	no_errors
RNF160	26046	genome.wustl.edu	36	21	29237871	29237871	+	Silent	SNP	A	G	G	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	21	29237871	29237871	A	G	SNP	RNF160	NM_015565	human	genbank	54_36p	-1	validated	silent	c.4209	p.H1403	0.998	NULL	superfamily_ARM repeat,superfamily_RING/U-box,HMMSmart_SM00744,HMMPfam_zf-C3HC4	-	no_errors
OR10C1	442194	genome.wustl.edu	36	6	29516502	29516502	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	6	29516502	29516502	T	A	SNP	OR10C1	NM_013941	human	genbank	54_36p	+1	provisional	missense	c.731	p.L244Q	0.963	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
C20orf185	359710	genome.wustl.edu	36	20	31120378	31120378	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	20	31120378	31120378	A	G	SNP	C20orf185	NM_182658	human	genbank	54_36p	+1	provisional	missense	c.1087	p.N363D	0.373	superfamily_Bactericidal_perm-incr_a/b_dom,HMMSmart_BPI2,HMMPfam_LBP_BPI_CETP_C	PatternScan_LBP_BPI_CETP,superfamily_Bactericidal_perm-incr_a/b_dom,HMMSmart_BPI1,HMMPfam_LBP_BPI_CETP,HMMSmart_BPI2,HMMPfam_LBP_BPI_CETP_C	-	no_errors
ENSG00000198493	0	genome.wustl.edu	36	6	32086990	32086990	+	Silent	SNP	C	C	T	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	6	32086990	32086990	C	T	SNP	ENSG00000198493	ENST00000359300	human	ensembl	54_36p	-1	known	silent	c.768	p.R256	0.682	superfamily_FN_III-like,HMMPfam_fn3,HMMSmart_FN3	superfamily_FN_III-like,HMMSmart_FN3,HMMPfam_fn3	-	no_errors
BBS9	27241	genome.wustl.edu	36	7	33394271	33394271	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	7	33394271	33394271	C	A	SNP	BBS9	NM_198428	human	genbank	54_36p	+1	reviewed	missense	c.2105	p.T702N	1.000	NULL	NULL	-	no_errors
UBAP2	55833	genome.wustl.edu	36	9	33988843	33988843	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	9	33988843	33988843	C	G	SNP	UBAP2	NM_018449	human	genbank	54_36p	-1	reviewed	missense	c.119	p.R40P	1.000	NULL	HMMPfam_UBA,HMMSmart_UBA	-	no_errors
ZNF536	9745	genome.wustl.edu	36	19	35628177	35628177	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	19	35628177	35628177	C	G	SNP	ZNF536	NM_014717	human	genbank	54_36p	+1	provisional	missense	c.1868	p.P623R	0.994	NULL	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
VSTM2L	128434	genome.wustl.edu	36	20	35993565	35993565	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	20	35993565	35993565	G	C	SNP	VSTM2L	NM_080607	human	genbank	54_36p	+1	validated	missense	c.236	p.W79S	1.000	superfamily_Immunoglobulin,HMMPfam_V-set,HMMSmart_SM00409	superfamily_Immunoglobulin,HMMPfam_V-set,HMMSmart_SM00409	-	no_errors
EIF2C1	26523	genome.wustl.edu	36	1	36140164	36140164	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	1	36140164	36140164	C	T	SNP	EIF2C1	NM_012199	human	genbank	54_36p	+1	reviewed	missense	c.1169	p.P390L	1.000	NULL	superfamily_PAZ domain,HMMPfam_DUF1785,HMMPfam_PAZ,superfamily_Ribonuclease H-like,HMMPfam_Piwi	-	no_errors
TGM2	7052	genome.wustl.edu	36	20	36192038	36192038	+	Silent	SNP	G	G	A	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	20	36192038	36192038	G	A	SNP	TGM2	NM_004613	human	genbank	54_36p	-1	reviewed	silent	c.2061	p.A687	0.746	superfamily_Transglutaminase two C-terminal domains	superfamily_E set domains,HMMPfam_Transglut_N,superfamily_Cysteine proteinases,HMMSmart_SM00460,HMMPfam_Transglut_core,PatternScan_TRANSGLUTAMINASES,superfamily_Transglutaminase two C-terminal domains,HMMPfam_Transglut_C	-	no_errors
APOBEC3G	60489	genome.wustl.edu	36	22	37809744	37809744	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	22	37809744	37809744	G	C	SNP	APOBEC3G	NM_021822	human	genbank	54_36p	+1	reviewed	missense	c.644	p.R215P	0.000	HMMPfam_APOBEC_N	HMMPfam_APOBEC_N,superfamily_Cytidine deaminase-like,HMMPfam_APOBEC_C,PatternScan_CYT_DCMP_DEAMINASES	-	no_errors
FBXO33	254170	genome.wustl.edu	36	14	38970743	38970743	+	Silent	SNP	C	C	A	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	14	38970743	38970743	C	A	SNP	FBXO33	NM_203301	human	genbank	54_36p	-1	validated	silent	c.375	p.L125	1.000	superfamily_SSF81383	superfamily_SSF81383,HMMPfam_F-box,HMMSmart_FBOX	-	no_errors
INO80	54617	genome.wustl.edu	36	15	39066625	39066625	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	15	39066625	39066625	T	A	SNP	INO80	NM_017553	human	genbank	54_36p	-1	validated	missense	c.3788	p.E1263V	1.000	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_SNF2_N,HMMSmart_SM00490,HMMPfam_Helicase_C	-	no_errors
ADAMTS20	80070	genome.wustl.edu	36	12	42056707	42056707	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	12	42056707	42056707	C	G	SNP	ADAMTS20	NM_025003	human	genbank	54_36p	-1	validated	missense	c.5012	p.G1671A	0.995	superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1	"HMMPfam_Pep_M12B_propep,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Reprolysin,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMPfam_ADAM_spacer1,HMMPfam_GON"	-	no_errors
LOC653097	653097	genome.wustl.edu	36	10	42066586	42066586	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	10	42066586	42066586	T	A	SNP	LOC653097	XM_925973	human	genbank	54_36p	+1	model	missense	c.102	p.N34K	1.000	NULL	NULL	-	no_errors
YIPF3	25844	genome.wustl.edu	36	6	43591679	43591679	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	6	43591679	43591679	C	A	SNP	YIPF3	NM_015388	human	genbank	54_36p	-1	validated	missense	c.214	p.A72S	0.997	NULL	HMMPfam_Yip1	-	no_errors
ENSG00000206944	0	genome.wustl.edu	36	18	43950215	43950215	+	RNA	SNP	T	C	C	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	18	43950215	43950215	T	C	SNP	ENSG00000206944	ENST00000384217	human	ensembl	54_36p	-1	novel	rna	NULL	NULL	1.000	-	-	-	no_errors
DUSP21	63904	genome.wustl.edu	36	X	44588842	44588842	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	X	44588842	44588842	G	C	SNP	DUSP21	NM_022076	human	genbank	54_36p	+1	reviewed	missense	c.520	p.G174R	0.972	NULL	superfamily_SSF52799,HMMPfam_DSPc,HMMSmart_DSPc,PatternScan_TYR_PHOSPHATASE_1	-	no_errors
FCGBP	8857	genome.wustl.edu	36	19	45090300	45090300	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	19	45090300	45090300	G	C	SNP	FCGBP	NM_003890	human	genbank	54_36p	-1	validated	missense	c.6507	p.H2169Q	0.000	HMMSmart_VWD,HMMPfam_VWD	HMMSmart_FOLN,HMMSmart_VWD,HMMPfam_VWD,HMMPfam_C8,superfamily_Cysrich_TIL,HMMPfam_TIL,HMMPfam_TIL_assoc,HMMSmart_VWC	-	no_errors
ABCC11	85320	genome.wustl.edu	36	16	46768347	46768347	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	16	46768347	46768347	C	T	SNP	ABCC11	NM_032583	human	genbank	54_36p	-1	reviewed	missense	c.3527	p.R1176K	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran	superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,HMMPfam_ABC_membrane,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran,PatternScan_ABC_TRANSPORTER_1	-	no_errors
C1QL4	338761	genome.wustl.edu	36	12	48016402	48016402	+	Silent	SNP	G	G	C	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	12	48016402	48016402	G	C	SNP	C1QL4	NM_001008223	human	genbank	54_36p	-1	provisional	silent	c.126	p.P42	0.028	NULL	HMMPfam_Collagen,HMMSmart_C1Q,superfamily_TNF_like,HMMPfam_C1q	-	no_errors
LOC120824	120824	genome.wustl.edu	36	11	48959813	48959813	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	11	48959813	48959813	C	T	SNP	LOC120824	XM_062300	human	genbank	54_36p	-1	model	missense	c.11	p.G4E	0.979	superfamily_RING/U-box	superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4,HMMPfam_zf-B_box,HMMSmart_SM00336,HMMPfam_SPRY	-	no_errors
DMXL2	23312	genome.wustl.edu	36	15	49586694	49586694	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	15	49586694	49586694	T	A	SNP	DMXL2	NM_015263	human	genbank	54_36p	-1	validated	missense	c.2693	p.E898V	1.000	NULL	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	-	no_errors
DDC	1644	genome.wustl.edu	36	7	50573114	50573114	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	7	50573114	50573114	T	A	SNP	DDC	NM_000790	human	genbank	54_36p	-1	reviewed	missense	c.373	p.M125L	1.000	superfamily_PLP-dependent transferases,HMMPfam_Pyridoxal_deC	superfamily_PLP-dependent transferases,HMMPfam_Pyridoxal_deC,PatternScan_DDC_GAD_HDC_YDC	-	no_errors
WDR72	256764	genome.wustl.edu	36	15	51812530	51812530	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	15	51812530	51812530	G	T	SNP	WDR72	NM_182758	human	genbank	54_36p	-1	validated	missense	c.109	p.Q37K	0.997	superfamily_WD40 repeat-like,HMMSmart_SM00320	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors
PHF7	51533	genome.wustl.edu	36	3	52431347	52431347	+	Silent	SNP	C	C	A	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	3	52431347	52431347	C	A	SNP	PHF7	NM_016483	human	genbank	54_36p	+1	reviewed	silent	c.750	p.A250	1.000	HMMSmart_RING	PatternScan_ZF_RING_1,PatternScan_ZF_PHD_1,HMMSmart_PHD,HMMSmart_RING	-	no_errors
ITGA7	3679	genome.wustl.edu	36	12	54368050	54368050	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	12	54368050	54368050	A	T	SNP	ITGA7	NM_002206	human	genbank	54_36p	-1	reviewed	missense	c.3155	p.L1052Q	1.000	NULL	superfamily_Integrin alpha N-terminal domain,HMMSmart_SM00191,HMMPfam_FG-GAP,HMMPfam_Integrin_alpha2,superfamily_Integrin domains,PatternScan_INTEGRIN_ALPHA,HMMPfam_Integrin_alpha	-	no_errors
LOC442308	442308	genome.wustl.edu	36	7	55681188	55681188	+	RNA	SNP	A	A	C	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	7	55681188	55681188	A	C	SNP	LOC442308	NR_003598	human	genbank	54_36p	+1	provisional	rna	NULL	NULL	1.000	-	-	-	pseudogene
OR9G4	283189	genome.wustl.edu	36	11	56267234	56267234	+	Silent	SNP	G	G	A	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	11	56267234	56267234	G	A	SNP	OR9G4	NM_001005284	human	genbank	54_36p	-1	provisional	silent	c.630	p.Y210	0.000	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
MIER3	166968	genome.wustl.edu	36	5	56269227	56269227	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	5	56269227	56269227	G	C	SNP	MIER3	NM_152622	human	genbank	54_36p	-1	validated	missense	c.371	p.A124G	1.000	NULL	PatternScan_EF_HAND_1,HMMPfam_ELM2,superfamily_Homeodomain_like,HMMSmart_SANT,HMMPfam_Myb_DNA-binding	-	no_errors
TBX2	6909	genome.wustl.edu	36	17	56835257	56835257	+	Silent	SNP	C	T	T	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	17	56835257	56835257	C	T	SNP	TBX2	NM_005994	human	genbank	54_36p	+1	validated	silent	c.687	p.A229	1.000	superfamily_P53_like_DNA_bnd,HMMSmart_TBOX,HMMPfam_T-box	superfamily_P53_like_DNA_bnd,HMMSmart_TBOX,HMMPfam_T-box,PatternScan_TBOX_1,PatternScan_TBOX_2	-	no_errors
OR1S1	219959	genome.wustl.edu	36	11	57739755	57739755	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	11	57739755	57739755	A	T	SNP	OR1S1	NM_001004458	human	genbank	54_36p	+1	provisional	missense	c.963	p.K321N	0.000	superfamily_SSF81321	PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321,HMMPfam_7tm_1	-	no_errors
OR10Q1	219960	genome.wustl.edu	36	11	57752101	57752101	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	11	57752101	57752101	C	T	SNP	OR10Q1	NM_001004471	human	genbank	54_36p	-1	provisional	missense	c.823	p.E275K	0.013	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
MS4A3	932	genome.wustl.edu	36	11	59585365	59585365	+	Silent	SNP	G	G	T	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	11	59585365	59585365	G	T	SNP	MS4A3	NM_006138	human	genbank	54_36p	+1	reviewed	silent	c.156	p.G52	0.974	NULL	HMMPfam_CD20	-	no_errors
STMN3	50861	genome.wustl.edu	36	20	61743914	61743914	+	Silent	SNP	C	C	T	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	20	61743914	61743914	C	T	SNP	STMN3	NM_015894	human	genbank	54_36p	-1	reviewed	silent	c.474	p.L158	1.000	superfamily_Stathmin,HMMPfam_Stathmin	superfamily_Stathmin,HMMPfam_Stathmin,PatternScan_STATHMIN_1,PatternScan_STATHMIN_2	-	no_errors
RTEL1	51750	genome.wustl.edu	36	20	61789514	61789514	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	20	61789514	61789514	C	G	SNP	RTEL1	NM_032957	human	genbank	54_36p	+1	reviewed	missense	c.1428	p.I476M	1.000	NULL	superfamily_SSF52540,HMMSmart_DEXDc2,HMMPfam_ResIII,HMMPfam_DEAD_2,HMMSmart_HELICc2,superfamily_SSF57850	-	no_errors
FAM96A	84191	genome.wustl.edu	36	15	62167833	62167833	+	Silent	SNP	C	C	T	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	15	62167833	62167833	C	T	SNP	FAM96A	ENST00000380290	human	ensembl	54_36p	-1	known	silent	c.291	p.V97	0.015	HMMPfam_DUF59	HMMPfam_DUF59	-	no_stop_codon
ROR1	4919	genome.wustl.edu	36	1	64397412	64397412	+	Silent	SNP	C	C	T	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	1	64397412	64397412	C	T	SNP	ROR1	NM_005012	human	genbank	54_36p	+1	validated	silent	c.1335	p.H445	0.300	NULL	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_Fz,superfamily_Kringle-like,HMMSmart_SM00130,HMMPfam_Kringle,PatternScan_KRINGLE_1,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_TYR	-	no_errors
STARD8	9754	genome.wustl.edu	36	X	67854175	67854175	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	X	67854175	67854175	A	T	SNP	STARD8	NM_014725	human	genbank	54_36p	+1	validated	missense	c.454	p.S152C	0.000	NULL	superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP,superfamily_Bet v1-like,HMMPfam_START,HMMSmart_SM00234	-	no_errors
MYO9A	4649	genome.wustl.edu	36	15	69957616	69957616	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	15	69957616	69957616	C	T	SNP	MYO9A	NM_006901	human	genbank	54_36p	-1	validated	missense	c.5750	p.G1917E	1.000	NULL	HMMPfam_RA,HMMSmart_SM00314,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head,HMMSmart_SM00015,HMMPfam_IQ,superfamily_Cysteine-rich domain,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP	-	no_errors
LOC220077	220077	genome.wustl.edu	36	11	71639688	71639688	+	RNA	SNP	G	G	T	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	11	71639688	71639688	G	T	SNP	LOC220077	XR_017002	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.000	-	-	-	no_errors
GOLGA6	342096	genome.wustl.edu	36	15	72151021	72151021	+	Silent	SNP	C	C	T	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	15	72151021	72151021	C	T	SNP	GOLGA6	NM_001038640	human	genbank	54_36p	-1	validated	silent	c.1623	p.K541	0.994	NULL	NULL	-	no_errors
COMMD4	54939	genome.wustl.edu	36	15	73418475	73418475	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	15	73418475	73418475	T	A	SNP	COMMD4	NM_017828	human	genbank	54_36p	+1	validated	missense	c.278	p.L93Q	1.000	HMMPfam_HCaRG	HMMPfam_HCaRG	-	no_errors
DCTN1	1639	genome.wustl.edu	36	2	74443794	74443794	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	2	74443794	74443794	A	T	SNP	DCTN1	NM_004082	human	genbank	54_36p	-1	reviewed	missense	c.3364	p.S1122T	0.995	NULL	superfamily_Cap-Gly domain,HMMPfam_CAP_GLY,PatternScan_CAP_GLY_1,superfamily_Spectrin repeat	-	no_errors
AK5	26289	genome.wustl.edu	36	1	77536117	77536117	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	1	77536117	77536117	T	C	SNP	AK5	NM_174858	human	genbank	54_36p	+1	reviewed	missense	c.596	p.I199T	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_ADK	HMMPfam_Dpy-30,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_ADK,PatternScan_ADENYLATE_KINASE	-	no_errors
ALPK3	57538	genome.wustl.edu	36	15	83185033	83185033	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	15	83185033	83185033	G	A	SNP	ALPK3	NM_020778	human	genbank	54_36p	+1	validated	missense	c.2125	p.E709K	0.003	NULL	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,superfamily_Protein kinase-like (PK-like),HMMPfam_Alpha_kinase,HMMSmart_SM00811	-	no_errors
TCF7L1	83439	genome.wustl.edu	36	2	85214503	85214503	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	2	85214503	85214503	T	A	SNP	TCF7L1	NM_031283	human	genbank	54_36p	+1	provisional	missense	c.185	p.L62Q	1.000	HMMPfam_CTNNB1_binding	HMMPfam_CTNNB1_binding,superfamily_HMG-box,HMMSmart_HMG,HMMPfam_HMG_box	-	no_errors
PRDM7	11105	genome.wustl.edu	36	16	88655376	88655376	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	16	88655376	88655376	G	A	SNP	PRDM7	NM_001098173	human	genbank	54_36p	-1	reviewed	missense	c.935	p.S312L	0.060	NULL	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMSmart_SM00349,HMMPfam_KRAB,HMMPfam_SSXRD	-	no_errors
MDN1	23195	genome.wustl.edu	36	6	90440688	90440688	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	6	90440688	90440688	G	C	SNP	MDN1	NM_014611	human	genbank	54_36p	-1	provisional	missense	c.13103	p.P4368R	0.998	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA_5,superfamily_vWA-like,HMMSmart_SM00327	-	no_errors
DECR1	1666	genome.wustl.edu	36	8	91082935	91082935	+	Silent	SNP	C	C	T	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	8	91082935	91082935	C	T	SNP	DECR1	NM_001359	human	genbank	54_36p	+1	reviewed	silent	c.39	p.S13	0.010	NULL	PatternScan_ADH_SHORT,superfamily_NAD(P)-bd,HMMPfam_adh_short	-	no_errors
SLIT1	6585	genome.wustl.edu	36	10	98813962	98813962	+	Silent	SNP	G	G	A	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	10	98813962	98813962	G	A	SNP	SLIT1	NM_003061	human	genbank	54_36p	-1	validated	silent	c.582	p.T194	1.000	superfamily_L domain-like,HMMSmart_SM00369,HMMPfam_LRR_1	HMMPfam_LRRNT,HMMSmart_SM00013,superfamily_L domain-like,HMMSmart_SM00369,HMMPfam_LRR_1,HMMSmart_SM00365,HMMSmart_SM00082,HMMPfam_LRRCT,superfamily_EGF/Laminin,HMMSmart_SM00179,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_EGF_CA,HMMSmart_SM00274,PatternScan_ASX_HYDROXYL,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282,HMMPfam_Laminin_G_2,HMMSmart_SM00041,PatternScan_CTCK_1	-	no_errors
LOC440313	440313	genome.wustl.edu	36	15	99142033	99142033	+	RNA	SNP	C	C	T	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	15	99142033	99142033	C	T	SNP	LOC440313	XR_041905	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.000	-	-	-	no_errors
POU3F2	5454	genome.wustl.edu	36	6	99390258	99390258	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	6	99390258	99390258	A	G	SNP	POU3F2	NM_005604	human	genbank	54_36p	+1	validated	missense	c.788	p.D263G	1.000	HMMPfam_Pou,HMMSmart_SM00352	HMMPfam_Pou,HMMSmart_SM00352,superfamily_lambda repressor-like DNA-binding domains,PatternScan_POU_1,PatternScan_POU_2,superfamily_Homeodomain-like,HMMSmart_SM00389,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1	-	no_errors
PVRIG	79037	genome.wustl.edu	36	7	99655544	99655544	+	Silent	SNP	C	C	A	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	7	99655544	99655544	C	A	SNP	PVRIG	NM_024070	human	genbank	54_36p	+1	validated	silent	c.75	p.T25	0.031	NULL	NULL	-	no_errors
COL11A1	1301	genome.wustl.edu	36	1	103263744	103263744	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	1	103263744	103263744	T	A	SNP	COL11A1	NM_080629	human	genbank	54_36p	-1	reviewed	missense	c.947	p.D316V	1.000	NULL	HMMSmart_TSPN,superfamily_ConA_like_lec_gl,HMMSmart_LamG,HMMPfam_Laminin_G_2,HMMPfam_Collagen,HMMSmart_COLFI,HMMPfam_COLFI	-	no_errors
COL4A5	1287	genome.wustl.edu	36	X	107817515	107817515	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	X	107817515	107817515	A	C	SNP	COL4A5	NM_033380	human	genbank	54_36p	+1	reviewed	missense	c.4463	p.Q1488P	0.011	superfamily_C-type_lectin_fold,HMMPfam_C4,HMMSmart_C4	HMMPfam_Collagen,superfamily_C-type_lectin_fold,HMMPfam_C4,HMMSmart_C4	-	no_errors
F7	2155	genome.wustl.edu	36	13	112818014	112818014	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	13	112818014	112818014	G	T	SNP	F7	NM_000131	human	genbank	54_36p	+1	reviewed	missense	c.470	p.G157V	0.994	superfamily_EGF/Laminin,HMMSmart_SM00181	HMMSmart_SM00069,superfamily_GLA-domain,HMMPfam_Gla,PatternScan_GLA_1,PatternScan_EGF_CA,HMMSmart_SM00179,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_ASX_HYDROXYL,PatternScan_EGF_1,superfamily_EGF/Laminin,PatternScan_EGF_2,superfamily_Trypsin-like serine proteases,HMMSmart_SM00020,HMMPfam_Trypsin,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	-	no_errors
GTPBP8	29083	genome.wustl.edu	36	3	114192750	114192750	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	3	114192750	114192750	G	C	SNP	GTPBP8	NM_014170	human	genbank	54_36p	+1	validated	missense	c.214	p.D72H	0.999	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_MMR_HSR1	-	no_errors
CD2	914	genome.wustl.edu	36	1	117098962	117098962	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	1	117098962	117098962	C	A	SNP	CD2	NM_001767	human	genbank	54_36p	+1	validated	missense	c.248	p.T83K	0.000	HMMPfam_V-set,superfamily_Immunoglobulin	HMMPfam_V-set,superfamily_Immunoglobulin,HMMPfam_C2-set	-	no_errors
CD2	914	genome.wustl.edu	36	1	117112787	117112787	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	1	117112787	117112787	G	C	SNP	CD2	NM_001767	human	genbank	54_36p	+1	validated	missense	c.915	p.Q305H	0.984	NULL	HMMPfam_C2-set,HMMPfam_V-set,superfamily_Immunoglobulin	-	no_errors
HPD	3242	genome.wustl.edu	36	12	120771978	120771978	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	12	120771978	120771978	T	A	SNP	HPD	NM_002150	human	genbank	54_36p	-1	validated	missense	c.516	p.K172N	1.000	superfamily_Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	superfamily_Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase,HMMPfam_Glyoxalase	-	no_errors
ITGB5	3693	genome.wustl.edu	36	3	126060795	126060795	+	Silent	SNP	G	G	C	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	3	126060795	126060795	G	C	SNP	ITGB5	NM_002213	human	genbank	54_36p	-1	provisional	silent	c.345	p.A115	0.000	HMMPfam_Integrin_beta,HMMSmart_INB	HMMSmart_PSI,HMMPfam_Integrin_beta,HMMSmart_INB,superfamily_SSF53300,HMMSmart_VWA,superfamily_SSF69179,HMMPfam_EGF_2,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_INTEGRIN_BETA,superfamily_SSF57196,HMMSmart_EGF,superfamily_Integrin_bsu_tail,HMMPfam_Integrin_B_tail,HMMPfam_Integrin_b_cyt	-	no_errors
LAMC3	10319	genome.wustl.edu	36	9	132952830	132952830	+	Silent	SNP	G	G	T	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	9	132952830	132952830	G	T	SNP	LAMC3	NM_006059	human	genbank	54_36p	+1	reviewed	silent	c.4377	p.R1459	0.041	NULL	HMMSmart_LamNT,HMMPfam_Laminin_N,HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,superfamily_SSF57196,PatternScan_EGF_1,PatternScan_EGF_LAM_1,HMMPfam_Laminin_B,PatternScan_EGF_2	-	no_errors
TRAPPC9	83696	genome.wustl.edu	36	8	141530315	141530315	+	Silent	SNP	G	G	T	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	8	141530315	141530315	G	T	SNP	TRAPPC9	NM_031466	human	genbank	54_36p	-1	provisional	silent	c.634	p.R212	1.000	NULL	HMMPfam_Trs120	-	no_errors
LRRC61	65999	genome.wustl.edu	36	7	149665583	149665583	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	7	149665583	149665583	G	A	SNP	LRRC61	NM_023942	human	genbank	54_36p	+1	validated	missense	c.700	p.D234N	0.935	NULL	superfamily_SSF52058,HMMPfam_LRR_1	-	no_errors
SYNE1	23345	genome.wustl.edu	36	6	152713097	152713097	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	6	152713097	152713097	C	A	SNP	SYNE1	NM_182961	human	genbank	54_36p	-1	reviewed	missense	c.11800	p.V3934F	1.000	superfamily_Spectrin repeat,HMMPfam_Spectrin,HMMSmart_SM00150	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_SM00033,PatternScan_ACTININ_2,superfamily_Spectrin repeat,HMMSmart_SM00150,HMMPfam_Spectrin,HMMPfam_KASH	-	no_errors
IGSF9	57549	genome.wustl.edu	36	1	158168958	158168958	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	1	158168958	158168958	C	T	SNP	IGSF9	NM_020789	human	genbank	54_36p	-1	validated	missense	c.1165	p.G389R	0.997	superfamily_Immunoglobulin	HMMPfam_V-set,HMMSmart_SM00409,superfamily_Immunoglobulin,HMMSmart_SM00408,HMMPfam_I-set,HMMPfam_ig,HMMSmart_SM00060,HMMPfam_fn3,superfamily_Fibronectin type III	-	no_errors
ATP1A2	477	genome.wustl.edu	36	1	158366968	158366968	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	1	158366968	158366968	C	A	SNP	ATP1A2	NM_000702	human	genbank	54_36p	+1	reviewed	missense	c.1784	p.A595D	1.000	superfamily_SSF81665,superfamily_SSF56784,HMMPfam_Hydrolase	HMMPfam_Cation_ATPase_N,superfamily_SSF81665,HMMPfam_E1-E2_ATPase,superfamily_SSF81653,superfamily_SSF56784,HMMPfam_Hydrolase,PatternScan_ATPASE_E1_E2,superfamily_SSF81660,HMMPfam_Cation_ATPase_C	-	no_errors
DOCK2	1794	genome.wustl.edu	36	5	169061929	169061929	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	5	169061929	169061929	T	G	SNP	DOCK2	NM_004946	human	genbank	54_36p	+1	validated	missense	c.1303	p.F435V	1.000	NULL	superfamily_SH3-domain,HMMSmart_SM00326,HMMPfam_SH3_2,superfamily_Cytochrome c	-	no_errors
G6PC2	57818	genome.wustl.edu	36	2	169471472	169471472	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	2	169471472	169471472	T	C	SNP	G6PC2	NM_021176	human	genbank	54_36p	+1	reviewed	missense	c.493	p.C165R	1.000	superfamily_Acid phosphatase/Vanadium-dependent haloperoxidase,HMMSmart_SM00014,HMMPfam_PAP2	superfamily_Acid phosphatase/Vanadium-dependent haloperoxidase,HMMSmart_SM00014,HMMPfam_PAP2	-	no_errors
TNFSF10	8743	genome.wustl.edu	36	3	173707215	173707215	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	3	173707215	173707215	C	T	SNP	TNFSF10	NM_003810	human	genbank	54_36p	-1	reviewed	missense	c.607	p.D203N	0.000	superfamily_TNF-like,HMMSmart_SM00207,HMMPfam_TNF	superfamily_TNF-like,HMMSmart_SM00207,HMMPfam_TNF,PatternScan_TNF_1	-	no_errors
B4GALT7	11285	genome.wustl.edu	36	5	176963806	176963806	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	5	176963806	176963806	G	C	SNP	B4GALT7	NM_007255	human	genbank	54_36p	+1	reviewed	missense	c.71	p.G24A	0.758	NULL	superfamily_Nucleotide-diphospho-sugar transferases,HMMPfam_Galactosyl_T_2	-	no_errors
LRRC33	375387	genome.wustl.edu	36	3	197872879	197872879	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	3	197872879	197872879	C	G	SNP	LRRC33	NM_198565	human	genbank	54_36p	+1	provisional	missense	c.1968	p.I656M	0.013	NULL	superfamily_SSF52058,HMMPfam_LRR_1,HMMSmart_LRR_TYP	-	no_errors
CASP8	841	genome.wustl.edu	36	2	201839737	201839737	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	2	201839737	201839737	A	T	SNP	CASP8	NM_001080125	human	genbank	54_36p	+1	reviewed	missense	c.460	p.R154W	0.823	superfamily_DEATH domain	superfamily_DEATH domain,HMMSmart_SM00031,HMMPfam_DED,superfamily_Caspase-like,HMMSmart_SM00115,HMMPfam_Peptidase_C14,PatternScan_CASPASE_HIS,PatternScan_CASPASE_CYS	-	no_errors
SERTAD4	56256	genome.wustl.edu	36	1	208482122	208482122	+	Silent	SNP	C	C	G	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	1	208482122	208482122	C	G	SNP	SERTAD4	NM_019605	human	genbank	54_36p	+1	validated	silent	c.888	p.P296	0.003	NULL	HMMPfam_SERTA	-	no_errors
CPS1	1373	genome.wustl.edu	36	2	211172483	211172483	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	2	211172483	211172483	C	T	SNP	CPS1	NM_001875	human	genbank	54_36p	+1	reviewed	missense	c.1502	p.P501L	1.000	superfamily_PreATP-grasp domain,HMMPfam_CPSase_L_chain	superfamily_Carbamoyl phosphate synthetase small subunit N-terminal domain,HMMPfam_CPSase_sm_chain,superfamily_Class I glutamine amidotransferase-like,HMMPfam_GATase,superfamily_PreATP-grasp domain,HMMPfam_CPSase_L_chain,HMMPfam_CPSase_L_D2,superfamily_Glutathione synthetase ATP-binding domain-like,PatternScan_CPSASE_1,PatternScan_CPSASE_2,superfamily_Carbamoyl phosphate synthetase large subunit connection domain,HMMPfam_CPSase_L_D3,superfamily_Methylglyoxal synthase-like,HMMPfam_MGS	-	no_errors
EPRS	2058	genome.wustl.edu	36	1	218265110	218265110	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	1	218265110	218265110	T	C	SNP	EPRS	NM_004446	human	genbank	54_36p	-1	reviewed	missense	c.737	p.E246G	1.000	superfamily_SSF52374,HMMPfam_tRNA-synt_1c	superfamily_GST_C_like,superfamily_SSF52374,HMMPfam_tRNA-synt_1c,PatternScan_AA_TRNA_LIGASE_I,HMMPfam_tRNA-synt_1c_C,superfamily_Ribosomal_L25rel,superfamily_S15/NS1_bind,HMMPfam_WHEP-TRS,PatternScan_WHEP_TRS_1,superfamily_SSF55681,HMMPfam_tRNA-synt_2b,superfamily_Anticodon_bd,HMMPfam_HGTP_anticodon,superfamily_Pro-tRNA_synth_II_C,HMMPfam_ProRS-C_1	-	no_errors
UGT1A4	54657	genome.wustl.edu	36	2	234292650	234292650	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-13-2061-01A-01D-1526-09	TCGA-13-2061-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0b9de923-d534-4822-bf1a-56ea599bf007	b8882c3b-a721-4993-ac63-d57990255883	2	234292650	234292650	G	A	SNP	UGT1A4	NM_007120	human	genbank	54_36p	+1	reviewed	missense	c.445	p.V149I	0.175	superfamily_UDP-Glycosyltransferase/glycogen phosphorylase,HMMPfam_UDPGT	superfamily_UDP-Glycosyltransferase/glycogen phosphorylase,HMMPfam_UDPGT,PatternScan_UDPGT	-	no_errors
