Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error
MT-CO1	4512	genome.wustl.edu	36	MT	6976	6976	+	Silent	SNP	T	C	C	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	MT	6976	6976	T	C	SNP	MT-CO1	ENST00000361624	human	ensembl	54_36p	+1	known	silent	c.1072	p.L358	NULL	superfamily_Cytochrome c oxidase subunit I-like,HMMPfam_COX1	superfamily_Cytochrome c oxidase subunit I-like,HMMPfam_COX1,PatternScan_COX1_CUB	-	no_stop_codon
MT-CYB	4519	genome.wustl.edu	36	MT	15636	15636	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	MT	15636	15636	T	C	SNP	MT-CYB	ENST00000361789	human	ensembl	54_36p	+1	known	missense	c.889	p.S297P	NULL	HMMPfam_Cytochrom_B_C,superfamily_Cytochrome_b/b6_C	superfamily_Transmembr_di-haem_cytochrome,HMMPfam_Cytochrom_B_N,HMMPfam_Cytochrom_B_C,superfamily_Cytochrome_b/b6_C	-	no_stop_codon:bad_bp_length_for_coding_region
ENSG00000205653	0	genome.wustl.edu	36	6	148509	148509	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	6	148509	148509	G	T	SNP	ENSG00000205653	ENST00000381078	human	ensembl	54_36p	+1	known	missense	c.77	p.C26F	0.002	NULL	NULL	-	no_errors
AXIN1	8312	genome.wustl.edu	36	16	283717	283717	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	16	283717	283717	G	C	SNP	AXIN1	NM_003502	human	genbank	54_36p	-1	reviewed	missense	c.1958	p.S653C	0.993	NULL	superfamily_Regulator of G-protein signaling RGS,HMMPfam_RGS,HMMSmart_SM00315,HMMPfam_Axin_b-cat_bind,HMMPfam_DIX,HMMSmart_SM00021	-	no_errors
C20orf54	113278	genome.wustl.edu	36	20	690441	690441	+	Silent	SNP	G	G	A	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	20	690441	690441	G	A	SNP	C20orf54	NM_033409	human	genbank	54_36p	-1	validated	silent	c.1101	p.S367	0.000	HMMPfam_DUF1011	HMMPfam_DUF1011	-	no_errors
PALM	5064	genome.wustl.edu	36	19	697346	697346	+	Silent	SNP	G	G	A	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	19	697346	697346	G	A	SNP	PALM	NM_002579	human	genbank	54_36p	+1	reviewed	silent	c.696	p.V232	0.982	HMMPfam_Paralemmin	HMMPfam_Paralemmin	-	no_errors
LOC100128838	0	genome.wustl.edu	36	1	845905	845905	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	1	845905	845905	C	T	SNP	LOC100128838	XM_001724524	human	genbank	54_36p	-1	model	missense	c.275	p.R92H	0.000	NULL	PatternScan_ASP_PROTEASE	-	no_errors
SCNN1D	6339	genome.wustl.edu	36	1	1215537	1215537	+	Silent	SNP	G	G	A	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	1	1215537	1215537	G	A	SNP	SCNN1D	NM_002978	human	genbank	54_36p	+1	validated	silent	c.1194	p.Q398	0.939	HMMPfam_ASC,PatternScan_ASC	HMMPfam_ASC,PatternScan_ASC	-	no_errors
PANK4	55229	genome.wustl.edu	36	1	2434194	2434194	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	1	2434194	2434194	C	T	SNP	PANK4	NM_018216	human	genbank	54_36p	-1	reviewed	missense	c.1720	p.V574M	1.000	superfamily_Hypothetical protein At2g17340,HMMPfam_DUF89	HMMPfam_Fumble,superfamily_Hypothetical protein At2g17340,HMMPfam_DUF89	-	no_errors
MEFV	4210	genome.wustl.edu	36	16	3234555	3234555	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	16	3234555	3234555	T	C	SNP	MEFV	NM_000243	human	genbank	54_36p	-1	reviewed	missense	c.1645	p.T549A	0.000	NULL	superfamily_DEATH domain,HMMPfam_PAAD_DAPIN,HMMPfam_zf-B_box,HMMSmart_SM00336,superfamily_B-box zinc-binding domain,HMMSmart_SM00589,HMMPfam_SPRY,HMMSmart_SM00449	-	no_errors
CORO7	79585	genome.wustl.edu	36	16	4354871	4354871	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	16	4354871	4354871	C	G	SNP	CORO7	NM_024535	human	genbank	54_36p	-1	validated	missense	c.950	p.R317P	0.998	HMMPfam_DUF1900	superfamily_WD40_like,HMMSmart_WD40,HMMPfam_WD40,HMMPfam_DUF1900,PatternScan_WD_REPEATS_1	-	no_errors
FBXO18	84893	genome.wustl.edu	36	10	5988413	5988413	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	10	5988413	5988413	C	G	SNP	FBXO18	NM_032807	human	genbank	54_36p	+1	reviewed	missense	c.718	p.P240A	0.683	NULL	superfamily_SSF81383,HMMPfam_F-box,HMMSmart_FBOX,superfamily_SSF52540	-	no_errors
THUMPD3	25917	genome.wustl.edu	36	3	9391212	9391212	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	3	9391212	9391212	A	T	SNP	THUMPD3	NM_015453	human	genbank	54_36p	+1	validated	missense	c.820	p.I274F	1.000	HMMPfam_THUMP	HMMPfam_THUMP,HMMPfam_UPF0020,superfamily_SSF53335,PatternScan_UPF0020	-	no_errors
MYH4	4622	genome.wustl.edu	36	17	10304267	10304267	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	17	10304267	10304267	G	T	SNP	MYH4	NM_017533	human	genbank	54_36p	-1	validated	missense	c.1244	p.T415N	1.000	superfamily_SSF52540,HMMSmart_MYSc,HMMPfam_Myosin_head	HMMPfam_Myosin_N,superfamily_SSF52540,HMMSmart_MYSc,HMMPfam_Myosin_head,HMMSmart_IQ,HMMPfam_Myosin_tail_1	-	no_errors
ZNF440	126070	genome.wustl.edu	36	19	11804370	11804370	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	19	11804370	11804370	G	A	SNP	ZNF440	NM_152357	human	genbank	54_36p	+1	validated	missense	c.1379	p.C460Y	0.098	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
TLR8	51311	genome.wustl.edu	36	X	12848890	12848890	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	X	12848890	12848890	A	T	SNP	TLR8	NM_138636	human	genbank	54_36p	+1	reviewed	missense	c.1810	p.N604Y	0.000	superfamily_SSF52058	superfamily_SSF52058,HMMPfam_LRR_1,superfamily_SSF52047,HMMSmart_LRR_TYP,HMMSmart_LRRCT,superfamily_TIR,HMMPfam_TIR	-	no_errors
ENSG00000186543	0	genome.wustl.edu	36	1	16832423	16832423	+	Silent	SNP	G	G	A	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	1	16832423	16832423	G	A	SNP	ENSG00000186543	ENST00000362058	human	ensembl	54_36p	-1	known	silent	c.30	p.P10	0.988	NULL	NULL	-	no_errors
ANO8	57719	genome.wustl.edu	36	19	17296753	17296753	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	19	17296753	17296753	G	T	SNP	ANO8	NM_020959	human	genbank	54_36p	-1	provisional	missense	c.3104	p.T1035N	0.998	NULL	HMMPfam_DUF590	-	no_errors
SH3KBP1	30011	genome.wustl.edu	36	X	19516577	19516577	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	X	19516577	19516577	C	T	SNP	SH3KBP1	ENST00000379697	human	ensembl	54_36p	-1	known	missense	c.1535	p.G512E	0.000	NULL	superfamily_SH3,HMMPfam_SH3_1,HMMSmart_SH3	-	no_errors
STK31	56164	genome.wustl.edu	36	7	23760553	23760553	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	7	23760553	23760553	G	T	SNP	STK31	NM_031414	human	genbank	54_36p	+1	reviewed	nonsense	c.1228	p.G410*	0.989	NULL	HMMPfam_TUDOR,superfamily_Tudor/PWWP/MBT,HMMSmart_SM00333,HMMSmart_SM00220,superfamily_Protein kinase-like (PK-like)	-	no_errors
KIAA1012	22878	genome.wustl.edu	36	18	27751611	27751611	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	18	27751611	27751611	C	A	SNP	KIAA1012	NM_014939	human	genbank	54_36p	-1	validated	nonsense	c.370	p.E124*	1.000	NULL	superfamily_TPR-like	-	no_errors
NOTCH4	4855	genome.wustl.edu	36	6	32296166	32296166	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	6	32296166	32296166	G	C	SNP	NOTCH4	NM_004557	human	genbank	54_36p	-1	reviewed	missense	c.1153	p.R385G	0.998	superfamily_EGF/Laminin,HMMSmart_SM00179,HMMSmart_SM00181,PatternScan_EGF_1	HMMSmart_SM00181,HMMPfam_EGF,HMMSmart_SM00179,superfamily_EGF/Laminin,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_EGF_CA,HMMPfam_EGF_CA,PatternScan_ASX_HYDROXYL,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00004,HMMPfam_Notch,superfamily_Notch domain,HMMPfam_NODP,superfamily_Ankyrin repeat,HMMPfam_Ank,HMMSmart_SM00248	-	no_errors
LOC644390	644390	genome.wustl.edu	36	15	32569350	32569350	+	RNA	SNP	T	T	C	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	15	32569350	32569350	T	C	SNP	LOC644390	XR_016623	human	genbank	54_36p	-1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
TULP1	7287	genome.wustl.edu	36	6	35587526	35587526	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	6	35587526	35587526	G	C	SNP	TULP1	NM_003322	human	genbank	54_36p	-1	reviewed	missense	c.226	p.P76A	0.001	NULL	superfamily_Transcriptional factor tubby C-terminal domain,HMMPfam_Tub,PatternScan_TUB_1,PatternScan_TUB_2	-	no_errors
KRT28	162605	genome.wustl.edu	36	17	36209298	36209298	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	17	36209298	36209298	T	C	SNP	KRT28	NM_181535	human	genbank	54_36p	-1	validated	missense	c.374	p.Y125C	0.953	HMMPfam_Filament	HMMPfam_Filament	-	no_errors
EIF3EIP	51386	genome.wustl.edu	36	22	36575326	36575326	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	22	36575326	36575326	C	A	SNP	EIF3EIP	ENST00000262832	human	ensembl	54_36p	+1	known	missense	c.53	p.A18D	0.000	NULL	HMMPfam_Paf67	-	no_errors
PAX5	5079	genome.wustl.edu	36	9	36996474	36996474	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	9	36996474	36996474	G	C	SNP	PAX5	NM_016734	human	genbank	54_36p	-1	reviewed	missense	c.471	p.S157R	1.000	NULL	HMMPfam_PAX,HMMSmart_SM00351,superfamily_Homeodomain-like,PatternScan_PAIRED_1	-	no_errors
L3MBTL	26013	genome.wustl.edu	36	20	41576826	41576826	+	Silent	SNP	G	G	A	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	20	41576826	41576826	G	A	SNP	L3MBTL	NM_015478	human	genbank	54_36p	+1	reviewed	silent	c.228	p.Q76	0.001	NULL	superfamily_Tudor/PWWP/MBT,HMMSmart_SM00561,HMMPfam_MBT,superfamily_CCHHC domain,HMMPfam_zf-C2HC	-	no_errors
SPTBN4	57731	genome.wustl.edu	36	19	45773286	45773286	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	19	45773286	45773286	G	T	SNP	SPTBN4	NM_020971	human	genbank	54_36p	+1	reviewed	missense	c.7666	p.D2556Y	0.999	NULL	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_SM00033,PatternScan_ACTININ_2,superfamily_Spectrin repeat,HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	-	no_errors
EPAS1	2034	genome.wustl.edu	36	2	46462273	46462273	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	2	46462273	46462273	G	A	SNP	EPAS1	NM_001430	human	genbank	54_36p	+1	validated	missense	c.2080	p.V694M	0.034	NULL	superfamily_HLH_basic,HMMPfam_HLH,HMMSmart_HLH,HMMSmart_PAS,superfamily_SSF55785,HMMPfam_PAS_3,HMMSmart_PAC,HMMPfam_HIF-1a_CTAD	-	no_errors
SYN1	6853	genome.wustl.edu	36	X	47318393	47318393	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	X	47318393	47318393	G	A	SNP	SYN1	NM_006950	human	genbank	54_36p	-1	reviewed	missense	c.1934	p.P645L	0.985	NULL	HMMPfam_Synapsin_N,PatternScan_SYNAPSIN_1,HMMPfam_Synapsin,superfamily_PreATP-grasp domain,superfamily_Glutathione synthetase ATP-binding domain-like,HMMPfam_Synapsin_C,PatternScan_SYNAPSIN_2	-	no_errors
CORIN	10699	genome.wustl.edu	36	4	47374715	47374715	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	4	47374715	47374715	C	G	SNP	CORIN	NM_006587	human	genbank	54_36p	-1	reviewed	missense	c.1246	p.V416L	0.356	HMMSmart_SM00192,superfamily_LDL receptor-like module	HMMPfam_Fz,superfamily_Frizzled cysteine-rich domain,HMMSmart_SM00063,superfamily_LDL receptor-like module,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,superfamily_SRCR-like,HMMSmart_SM00202,superfamily_Trypsin-like serine proteases,HMMSmart_SM00020,HMMPfam_Trypsin,PatternScan_SRCR_1,PatternScan_TRYPSIN_SER	-	no_errors
FTSJ1	24140	genome.wustl.edu	36	X	48225817	48225817	+	Silent	SNP	G	G	T	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	X	48225817	48225817	G	T	SNP	FTSJ1	NM_012280	human	genbank	54_36p	+1	reviewed	silent	c.738	p.S246	0.923	NULL	superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_FtsJ	-	no_errors
PCDH15	65217	genome.wustl.edu	36	10	55519755	55519755	+	Silent	SNP	T	T	A	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	10	55519755	55519755	T	A	SNP	PCDH15	NM_033056	human	genbank	54_36p	-1	reviewed	silent	c.1992	p.S664	1.000	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like,HMMPfam_Cadherin	-	no_errors
C8A	731	genome.wustl.edu	36	1	57124400	57124400	+	Silent	SNP	G	G	C	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	1	57124400	57124400	G	C	SNP	C8A	NM_000562	human	genbank	54_36p	+1	reviewed	silent	c.1068	p.V356	0.915	HMMPfam_MACPF,HMMSmart_MACPF	PatternScan_EGF_2,superfamily_TSP1,HMMSmart_TSP1,HMMPfam_TSP_1,superfamily_LDL_rcpt_classA_cys-rich,HMMPfam_Ldl_recept_a,HMMSmart_LDLa,PatternScan_LDLRA_1,HMMPfam_MACPF,HMMSmart_MACPF,PatternScan_MAC_PERFORIN,superfamily_SSF57196,PatternScan_EGF_1	-	no_errors
KANK4	163782	genome.wustl.edu	36	1	62512158	62512158	+	Silent	SNP	G	G	A	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	1	62512158	62512158	G	A	SNP	KANK4	NM_181712	human	genbank	54_36p	-1	validated	silent	c.1206	p.N402	0.000	NULL	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank	-	no_errors
ZNF735	728898	genome.wustl.edu	36	7	63104041	63104041	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	7	63104041	63104041	T	G	SNP	ZNF735	ENST00000398732	human	ensembl	54_36p	+1	known	missense	c.168	p.I56M	0.762	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMSmart_SM00349	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_stop_codon
STARD8	9754	genome.wustl.edu	36	X	67860394	67860394	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	X	67860394	67860394	G	A	SNP	STARD8	NM_014725	human	genbank	54_36p	+1	validated	missense	c.2761	p.D921N	0.990	superfamily_Bet v1-like,HMMPfam_START,HMMSmart_SM00234	superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP,superfamily_Bet v1-like,HMMPfam_START,HMMSmart_SM00234	-	no_errors
ZFHX3	463	genome.wustl.edu	36	16	71379929	71379929	+	Silent	SNP	C	C	A	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	16	71379929	71379929	C	A	SNP	ZFHX3	NM_006885	human	genbank	54_36p	-1	validated	silent	c.9747	p.G3249	1.000	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2,HMMSmart_SM00451,HMMSmart_SM00389,superfamily_Homeodomain-like,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1	-	no_errors
KIAA1618	57714	genome.wustl.edu	36	17	75880020	75880020	+	Splice_Site	SNP	A	G	G	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	17	75880020	75880020	A	G	SNP	KIAA1618	NM_020954	human	genbank	54_36p	+1	validated	splice_site	c.1272-2	e7-2	0.101	-	-	-	no_errors
SLC16A3	9123	genome.wustl.edu	36	17	77787324	77787324	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	17	77787324	77787324	C	G	SNP	SLC16A3	NM_001042422	human	genbank	54_36p	+1	validated	missense	c.151	p.Q51E	0.983	superfamily_MFS_gen_substrate_transporter,HMMPfam_MFS_1	superfamily_MFS_gen_substrate_transporter,HMMPfam_MFS_1	-	no_errors
MYF6	4618	genome.wustl.edu	36	12	79625866	79625866	+	Silent	SNP	C	C	T	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	12	79625866	79625866	C	T	SNP	MYF6	NM_002469	human	genbank	54_36p	+1	provisional	silent	c.237	p.I79	1.000	HMMPfam_Basic,HMMSmart_SM00520	HMMPfam_Basic,HMMSmart_SM00520,superfamily_HLH helix-loop-helix DNA-binding domain,HMMPfam_HLH,HMMSmart_SM00353	-	no_errors
C6orf168	84553	genome.wustl.edu	36	6	99903721	99903721	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	6	99903721	99903721	G	C	SNP	C6orf168	NM_032511	human	genbank	54_36p	-1	validated	missense	c.249	p.H83Q	1.000	NULL	superfamily_Thioredoxin-like,HMMPfam_Tom37,superfamily_Glutathione S-transferase (GST) C-terminal domain	-	no_errors
SLCO6A1	133482	genome.wustl.edu	36	5	101783471	101783471	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	5	101783471	101783471	C	G	SNP	SLCO6A1	NM_173488	human	genbank	54_36p	-1	validated	missense	c.1430	p.C477S	0.006	HMMPfam_OATP,superfamily_MFS general substrate transporter	HMMPfam_OATP,superfamily_MFS general substrate transporter,superfamily_Kazal-type serine protease inhibitors,HMMPfam_Kazal_2	-	no_errors
CASP4	837	genome.wustl.edu	36	11	104324552	104324552	+	Silent	SNP	C	C	T	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	11	104324552	104324552	C	T	SNP	CASP4	NM_001225	human	genbank	54_36p	-1	reviewed	silent	c.843	p.Q281	0.000	superfamily_Caspase-like,HMMSmart_SM00115,HMMPfam_Peptidase_C14	HMMSmart_SM00114,superfamily_DEATH domain,HMMPfam_CARD,superfamily_Caspase-like,HMMSmart_SM00115,HMMPfam_Peptidase_C14,PatternScan_CASPASE_HIS,PatternScan_CASPASE_CYS	-	no_errors
RGPD3	653489	genome.wustl.edu	36	2	106442176	106442176	+	Silent	SNP	A	A	G	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	2	106442176	106442176	A	G	SNP	RGPD3	ENST00000304514	human	ensembl	54_36p	-1	known	silent	c.117	p.A39	0.999	superfamily_SSF48452	superfamily_SSF48452,HMMPfam_TPR_1,superfamily_SSF50729,HMMSmart_RanBD,HMMPfam_Ran_BP1,HMMPfam_GRIP,HMMSmart_Grip	-	no_errors
MID2	11043	genome.wustl.edu	36	X	106984526	106984526	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	X	106984526	106984526	T	A	SNP	MID2	NM_012216	human	genbank	54_36p	+1	reviewed	missense	c.692	p.V231D	1.000	HMMSmart_SM00502	superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1,HMMSmart_SM00336,HMMPfam_zf-B_box,superfamily_B-box zinc-binding domain,HMMSmart_SM00502,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,HMMPfam_SPRY,HMMSmart_SM00449	-	no_errors
SOX1	6656	genome.wustl.edu	36	13	111770000	111770000	+	Silent	SNP	C	T	T	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	13	111770000	111770000	C	T	SNP	SOX1	NM_005986	human	genbank	54_36p	+1	reviewed	silent	c.27	p.D9	1.000	NULL	superfamily_HMG-box,HMMSmart_HMG,HMMPfam_HMG_box	-	no_errors
CD200	4345	genome.wustl.edu	36	3	113549298	113549298	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	3	113549298	113549298	G	A	SNP	CD200	NM_001004196	human	genbank	54_36p	+1	reviewed	missense	c.700	p.G234R	0.961	superfamily_SSF48726,HMMPfam_ig	superfamily_SSF48726,HMMSmart_IG,HMMPfam_ig	-	no_errors
C10orf118	55088	genome.wustl.edu	36	10	115886961	115886961	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	10	115886961	115886961	A	G	SNP	C10orf118	NM_018017	human	genbank	54_36p	-1	validated	missense	c.1300	p.C434R	1.000	NULL	superfamily_Prefoldin	-	no_errors
NKRF	55922	genome.wustl.edu	36	X	118607562	118607562	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	X	118607562	118607562	G	T	SNP	NKRF	NM_017544	human	genbank	54_36p	-1	validated	missense	c.1854	p.S618R	1.000	HMMSmart_SM00393,superfamily_R3H domain,HMMPfam_R3H	superfamily_dsRNA-binding domain-like,HMMPfam_dsrm,HMMSmart_SM00358,HMMSmart_SM00443,HMMPfam_G-patch,HMMSmart_SM00393,superfamily_R3H domain,HMMPfam_R3H	-	no_errors
CIT	11113	genome.wustl.edu	36	12	118679589	118679589	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	12	118679589	118679589	C	T	SNP	CIT	NM_007174	human	genbank	54_36p	-1	validated	missense	c.2549	p.R850Q	0.997	NULL	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,HMMSmart_SM00133,HMMPfam_Pkinase_C,PatternScan_CPSASE_2,superfamily_Cysteine-rich domain,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,HMMSmart_SM00036,HMMPfam_CNH	-	no_errors
TRMT11	60487	genome.wustl.edu	36	6	126375627	126375627	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	6	126375627	126375627	G	T	SNP	TRMT11	NM_001031712	human	genbank	54_36p	+1	validated	nonsense	c.943	p.E315*	1.000	HMMPfam_UPF0020,superfamily_S-adenosyl-L-methionine-dependent methyltransferases	HMMPfam_UPF0020,superfamily_S-adenosyl-L-methionine-dependent methyltransferases,PatternScan_N6_MTASE	-	no_errors
SMO	6608	genome.wustl.edu	36	7	128633242	128633242	+	Silent	SNP	G	G	T	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	7	128633242	128633242	G	T	SNP	SMO	NM_005631	human	genbank	54_36p	+1	provisional	silent	c.936	p.L312	1.000	HMMPfam_Frizzled	HMMPfam_Fz,superfamily_Frizzled cysteine-rich domain,HMMSmart_SM00063,HMMPfam_Frizzled	-	no_errors
ENOX2	10495	genome.wustl.edu	36	X	129650556	129650556	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	X	129650556	129650556	A	G	SNP	ENOX2	NM_182314	human	genbank	54_36p	-1	reviewed	missense	c.302	p.I101T	1.000	NULL	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	-	no_errors
VAV2	7410	genome.wustl.edu	36	9	135629920	135629920	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	9	135629920	135629920	C	A	SNP	VAV2	NM_003371	human	genbank	54_36p	-1	reviewed	missense	c.2063	p.R688M	1.000	superfamily_SSF55550,HMMSmart_SH2,HMMPfam_SH2	HMMPfam_CH,superfamily_Calponin-homology,HMMSmart_CH,superfamily_DH-domain,HMMPfam_RhoGEF,HMMSmart_RhoGEF,PatternScan_DH_1,superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH,HMMSmart_C1,PatternScan_ZF_DAG_PE_1,superfamily_SSF57889,HMMPfam_C1_1,superfamily_SH3,HMMSmart_SH3,HMMPfam_SH3_2,superfamily_SSF55550,HMMSmart_SH2,HMMPfam_SH2,HMMPfam_SH3_1	-	no_errors
SF3B4	10262	genome.wustl.edu	36	1	148162183	148162183	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	1	148162183	148162183	C	G	SNP	SF3B4	NM_005850	human	genbank	54_36p	-1	reviewed	missense	c.1150	p.G384R	1.000	NULL	HMMSmart_RRM,superfamily_SSF54928,HMMPfam_RRM_1	-	no_errors
TSC22D2	9819	genome.wustl.edu	36	3	151611282	151611282	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	3	151611282	151611282	G	C	SNP	TSC22D2	NM_014779	human	genbank	54_36p	+1	provisional	missense	c.1455	p.Q485H	1.000	NULL	PatternScan_TSC22,HMMPfam_TSC22	-	no_errors
S100A7L2	645922	genome.wustl.edu	36	1	151676297	151676297	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	1	151676297	151676297	G	C	SNP	S100A7L2	NM_001045479	human	genbank	54_36p	-1	validated	missense	c.167	p.S56C	0.006	superfamily_SSF47473	PatternScan_S100_CABP,superfamily_SSF47473,PatternScan_EF_HAND_1	-	no_errors
PALLD	23022	genome.wustl.edu	36	4	169669492	169669492	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	4	169669492	169669492	G	A	SNP	PALLD	NM_016081	human	genbank	54_36p	+1	validated	missense	c.262	p.E88K	0.002	NULL	superfamily_SSF48726,HMMPfam_I-set,HMMSmart_IGc2,PatternScan_DEHYDRATASE_SER_THR	-	no_errors
TLR5	7100	genome.wustl.edu	36	1	221352657	221352657	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	1	221352657	221352657	C	A	SNP	TLR5	NM_003268	human	genbank	54_36p	-1	validated	missense	c.340	p.A114S	0.638	superfamily_SSF52058,HMMSmart_LRR_TYP	superfamily_SSF52058,HMMSmart_LRR_TYP,HMMPfam_LRR_1,HMMSmart_LRRCT,HMMPfam_LRRCT,superfamily_TIR,HMMSmart_TIR,HMMPfam_TIR	-	no_errors
ALPI	248	genome.wustl.edu	36	2	233032041	233032041	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-13-2065-01A-01D-1526-09	TCGA-13-2065-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	66351632-e3d9-47dc-8545-6546d5679167	f717ca27-9130-4659-a79e-34732875288b	2	233032041	233032041	G	A	SNP	ALPI	NM_001631	human	genbank	54_36p	+1	reviewed	missense	c.1528	p.A510T	0.000	NULL	superfamily_Alkaline phosphatase-like,HMMPfam_Alk_phosphatase,HMMSmart_SM00098,PatternScan_ALKALINE_PHOSPHATASE	-	no_errors
