Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error
LRRC39	127495	genome.wustl.edu	36	1	100390656	100390656	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	1	100390656	100390656	G	A	SNP	LRRC39	NM_144620	human	genbank	54_36p	-1	provisional	silent	c.825	p.F275	1	NULL	-	-	no_errors
LOC126987	126987	genome.wustl.edu	36	1	106424948	106424948	+	RNA	SNP	A	T	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	T	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	1	106424948	106424948	A	T	SNP	LOC126987	XR_016153	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.25	-	-	-	no_errors
LOC391073	391073	genome.wustl.edu	36	1	119778664	119778664	+	RNA	SNP	G	G	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	1	119778664	119778664	G	T	SNP	LOC391073	XR_016552	human	genbank	54_36p	-1	model	rna	NULL	NULL	1	-	-	-	pseudogene
LOC391081	391081	genome.wustl.edu	36	1	119953103	119953103	+	RNA	SNP	T	T	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	1	119953103	119953103	T	A	SNP	LOC391081	XR_017445	human	genbank	54_36p	1	model	rna	NULL	NULL	0.07	-	-	-	pseudogene
GJA8	2703	genome.wustl.edu	36	1	145847875	145847875	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	1	145847875	145847875	A	G	SNP	GJA8	NM_005267	human	genbank	54_36p	1	validated	missense	c.1169	p.K390R	0.44	NULL	-	-	no_errors
BOLA1	51027	genome.wustl.edu	36	1	148138293	148138293	+	Missense_Mutation	SNP	G	G	C		Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	1	148138293	148138293	G	C	SNP	BOLA1	NM_016074	human	genbank	54_36p	1	validated	missense	c.57	p.L19F	0.049	NULL	-	-	no_errors
SHC1	6464	genome.wustl.edu	36	1	153209367	153209367	+	Missense_Mutation	SNP	G	G	A		Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	1	153209367	153209367	G	A	SNP	SHC1	NM_183001	human	genbank	54_36p	-1	validated	missense	c.260	p.A87V	0.1	NULL	HMMPfam_SH2,HMMPfam_PID,superfamily_PH domain-like,superfamily_SH2 domain	-	no_errors
LMNA	4000	genome.wustl.edu	36	1	154371347	154371347	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	1	154371347	154371347	T	G	SNP	LMNA	NM_170707	human	genbank	54_36p	1	reviewed	missense	c.767	p.V256G	1	HMMPfam_Filament	HMMPfam_IF_tail;HMMPfam_Filament;superfamily_Prefoldin;superfamily_Lamin A/C globular tail domain	-	no_errors
SPTA1	6708	genome.wustl.edu	36	1	156850149	156850149	+	Silent	SNP	A	A	C	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	1	156850149	156850149	A	C	SNP	SPTA1	NM_003126	human	genbank	54_36p	-1	reviewed	silent	c.6975	p.A2325	0.79	NULL	-	-	no_errors
MNDA	4332	genome.wustl.edu	36	1	157085639	157085639	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	1	157085639	157085639	G	A	SNP	MNDA	NM_002432	human	genbank	54_36p	1	reviewed	missense	c.1212	p.M404I		NULL	HMMPfam_PAAD_DAPIN;HMMPfam_HIN	-	no_errors
PYHIN1	149628	genome.wustl.edu	36	1	157180391	157180391	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	1	157180391	157180391	A	T	SNP	PYHIN1	NM_152501	human	genbank	54_36p	1	validated	missense	c.1190	p.Q397L	0.11	NULL	-	-	no_errors
ARHGAP30	257106	genome.wustl.edu	36	1	159285106	159285106	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	1	159285106	159285106	G	C	SNP	ARHGAP30	NM_001025598	human	genbank	54_36p	-1	validated	missense	c.2329	p.Q777E	0.01	NULL	-	-	no_errors
SLC9A11	284525	genome.wustl.edu	36	1	171771678	171771678	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	1	171771678	171771678	C	G	SNP	SLC9A11	NM_178527	human	genbank	54_36p	-1	validated	missense	c.1689	p.M563I	0.05	NULL	-	-	no_errors
PAX7	5081	genome.wustl.edu	36	1	18833476	18833476	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	1	18833476	18833476	G	C	SNP	PAX7	NM_002584	human	genbank	54_36p	1	reviewed	missense	c.178	p.V60L	1	HMMPfam_PAX	HMMPfam_Homeobox;HMMPfam_PAX;superfamily_Homeodomain-like	-	no_errors
PPFIA4	8497	genome.wustl.edu	36	1	201304215	201304215	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	1	201304215	201304215	T	A	SNP	PPFIA4	NM_015053	human	genbank	54_36p	1	validated	missense	c.1642	p.W548R	1	HMMPfam_SAM_2	HMMPfam_SAM_1;superfamily_SAM/Pointed domain;HMMPfam_SAM_2	-	no_errors
KCNH1	3756	genome.wustl.edu	36	1	208924017	208924017	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	1	208924017	208924017	C	T	SNP	KCNH1	NM_172362	human	genbank	54_36p	-1	reviewed	silent	c.2199	p.P733	0.67	NULL	-	-	no_errors
USH2A	7399	genome.wustl.edu	36	1	214313107	214313107	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	1	214313107	214313107	C	T	SNP	USH2A	NM_206933	human	genbank	54_36p	-1	reviewed	missense	c.5731	p.G1911R	1	NULL	-	-	no_errors
HSPG2	3339	genome.wustl.edu	36	1	22078135	22078135	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	1	22078135	22078135	T	C	SNP	HSPG2	NM_005529	human	genbank	54_36p	-1	validated	missense	c.2410	p.M804V	0.93	HMMPfam_Laminin_EGF	superfamily_Immunoglobulin;superfamily_EGF/Laminin;superfamily_LDL receptor-like module;superfamily_TNF receptor-like;HMMPfam_Laminin_B;HMMPfam_SEA;HMMPfam_Laminin_EGF;HMMPfam_Ldl_recept_a;HMMPfam_EGF;superfamily_Concanavalin A-like lectins/glucanases;HMMPfam_Laminin_G_2;HMMPfam_I-set;HMMPfam_V-set;HMMPfam_ig	-	no_errors
RYR2	6262	genome.wustl.edu	36	1	235904746	235904746	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	1	235904746	235904746	C	G	SNP	RYR2	NM_001035	human	genbank	54_36p	1	reviewed	missense	c.8807	p.A2936G	1	NULL	HMMPfam_RYDR_ITPR;HMMPfam_efhand;HMMPfam_RyR;HMMPfam_MIR;HMMPfam_SPRY;HMMPfam_Ion_trans;HMMPfam_RR_TM4-6;HMMPfam_RIH_assoc;HMMPfam_Ins145_P3_rec;superfamily_EF-hand;superfamily_MIR domain (Pfam 02815)	-	no_errors
WDTC1	23038	genome.wustl.edu	36	1	27505417	27505417	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	1	27505417	27505417	G	A	SNP	WDTC1	NM_015023	human	genbank	54_36p	1	validated	missense	c.1987	p.D663N	1	NULL	-	-	no_errors
COL16A1	1307	genome.wustl.edu	36	1	31924299	31924299	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	1	31924299	31924299	C	T	SNP	COL16A1	NM_001856	human	genbank	54_36p	-1	reviewed	missense	c.1864	p.A622T	0.59	NULL	-	-	no_errors
ZSCAN20	7579	genome.wustl.edu	36	1	33731718	33731718	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	1	33731718	33731718	A	G	SNP	ZSCAN20	NM_145238	human	genbank	54_36p	1	validated	missense	c.1789	p.T597A		NULL	-	-	no_errors
SLC2A5	6518	genome.wustl.edu	36	1	9021500	9021500	+	Missense_Mutation	SNP	C	T	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	T	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	1	9021500	9021500	C	T	SNP	SLC2A5	NM_003039	human	genbank	54_36p	-1	validated	missense	c.1072	p.V358M	0.823	HMMPfam_Sugar_tr	HMMPfam_Sugar_tr,superfamily_MFS general substrate transporter	-	no_errors
INA	9118	genome.wustl.edu	36	10	105038213	105038213	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	10	105038213	105038213	A	C	SNP	INA	NM_032727	human	genbank	54_36p	1	validated	missense	c.1297	p.S433R	0.47	NULL	HMMPfam_Filament;HMMPfam_Filament_head;superfamily_alpha-catenin/vinculin	-	no_errors
NRAP	4892	genome.wustl.edu	36	10	115358206	115358206	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	10	115358206	115358206	G	T	SNP	NRAP	NM_198060	human	genbank	54_36p	-1	validated	missense	c.3659	p.P1220H	1	HMMPfam_Nebulin	HMMPfam_Nebulin;HMMPfam_LIM;superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors
ST8SIA6	338596	genome.wustl.edu	36	10	17403280	17403280	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	10	17403280	17403280	A	C	SNP	ST8SIA6	NM_001004470	human	genbank	54_36p	-1	validated	missense	c.800	p.L267R	0.14	HMMPfam_Glyco_transf_29	HMMPfam_Glyco_transf_29	-	no_errors
LOC399748	399748	genome.wustl.edu	36	10	43421077	43421077	+	RNA	SNP	C	C	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	10	43421077	43421077	C	A	SNP	LOC399748	XR_016318	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.93	-	-	-	pseudogene
LOC100128737	100128737	genome.wustl.edu	36	7	107176637	107176637	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	7	107176637	107176637	C	T	SNP	LOC100128737	XM_001718329	human	genbank	54_36p	-1	model	missense	c.3	p.M1I	1	NULL	-	-	no_errors
CUL5	8065	genome.wustl.edu	36	11	107430593	107430593	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	11	107430593	107430593	G	T	SNP	CUL5	NM_003478	human	genbank	54_36p	1	validated	missense	c.563	p.C188F	1	HMMPfam_Cullin	"HMMPfam_Cullin;superfamily_""Winged helix"" DNA-binding domain;superfamily_Cullin repeat;superfamily_Cullin homology domain"	-	no_errors
NNMT	4837	genome.wustl.edu	36	11	113672574	113672574	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	11	113672574	113672574	C	G	SNP	NNMT	NM_006169	human	genbank	54_36p	1	reviewed	missense	c.86	p.S29C	0.69	HMMPfam_NNMT_PNMT_TEMT	HMMPfam_NNMT_PNMT_TEMT;superfamily_S-adenosyl-L-methionine-dependent methyltransferases	-	no_errors
JAM3	83700	genome.wustl.edu	36	11	133444255	133444255	+	Missense_Mutation	SNP	C	C	A		Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	11	133444255	133444255	C	A	SNP	JAM3	NM_032801	human	genbank	54_36p	1	reviewed	missense	c.202	p.L68I	0.779	NULL	HMMPfam_V-set,HMMPfam_ig,superfamily_Immunoglobulin	-	no_errors
PIK3C2A	5286	genome.wustl.edu	36	11	17128748	17128748	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	11	17128748	17128748	G	C	SNP	PIK3C2A	NM_002645	human	genbank	54_36p	-1	validated	missense	c.1200	p.H400Q	0.01	NULL	superfamily_C2 domain (Calcium/lipid-binding domain CaLB);superfamily_Protein kinase-like (PK-like);superfamily_ARM repeat;superfamily_Ubiquitin-like;superfamily_PX domain;C2;HMMPfam_C2;PI3K_rbd;HMMPfam_PI3K_rbd;PI3_PI4_kinase;HMMPfam_PI3_PI4_kinase;PI3Ka;HMMPfam_PI3Ka;PX;HMMPfam_PX;PI3K_C2;HMMPfam_PI3K_C2	-	no_errors
OR51E2	81285	genome.wustl.edu	36	11	4659616	4659616	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	11	4659616	4659616	C	A	SNP	OR51E2	NM_030774	human	genbank	54_36p	-1	validated	missense	c.902	p.R301L	0.14	NULL	-	-	no_errors
CELF1	10658	genome.wustl.edu	36	11	47464899	47464899	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	11	47464899	47464899	C	G	SNP	CUGBP1	NM_001025596	human	genbank	54_36p	-1	reviewed	missense	c.289	p.A97P	1	NULL	-	-	no_errors
OR5AS1	219447	genome.wustl.edu	36	11	55555307	55555307	+	Silent	SNP	T	T	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	11	55555307	55555307	T	G	SNP	OR5AS1	NM_001001921	human	genbank	54_36p	1	provisional	silent	c.837	p.T279		NULL	-	-	no_errors
OR8U1	219417	genome.wustl.edu	36	11	55899999	55899999	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	11	55899999	55899999	G	T	SNP	OR8U1	NM_001005204	human	genbank	54_36p	1	provisional	missense	c.324	p.M108I	0	NULL	-	-	no_errors
OR4D6	219983	genome.wustl.edu	36	11	58981869	58981869	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	11	58981869	58981869	A	C	SNP	OR4D6	NM_001004708	human	genbank	54_36p	1	provisional	missense	c.860	p.Y287S	0.99	NULL	-	-	no_errors
SCGB2A2	4250	genome.wustl.edu	36	11	61794293	61794293	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	11	61794293	61794293	C	T	SNP	SCGB2A2	NM_002411	human	genbank	54_36p	1	provisional	missense	c.29	p.A10V	0.01	HMMPfam_Uteroglobin	HMMPfam_Uteroglobin;superfamily_Uteroglobin-like	-	no_errors
C2CD3	26005	genome.wustl.edu	36	11	73521642	73521642	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	11	73521642	73521642	C	G	SNP	C2CD3	NM_015531	human	genbank	54_36p	-1	validated	missense	c.1112	p.R371P		NULL	HMMPfam_C2;superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	-	no_errors
ODZ4	26011	genome.wustl.edu	36	11	78065017	78065017	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	11	78065017	78065017	C	T	SNP	ODZ4	NM_001098816	human	genbank	54_36p	-1	validated	missense	c.3338	p.G1113D	1	NULL	-	-	no_errors
FAT3	120114	genome.wustl.edu	36	11	91725598	91725598	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	11	91725598	91725598	G	T	SNP	FAT3	NM_001008781	human	genbank	54_36p	1	validated	missense	c.672	p.K224N	0.98	NULL	-	-	no_errors
STAB2	55576	genome.wustl.edu	36	12	102578251	102578251	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	12	102578251	102578251	C	T	SNP	STAB2	NM_017564	human	genbank	54_36p	1	reviewed	missense	c.1747	p.L583F	1	HMMPfam_Fasciclin	HMMPfam_Xlink;HMMPfam_Fasciclin;HMMPfam_EGF;HMMPfam_EGF_alliinase;superfamily_Mannose 6-phosphate receptor domain;superfamily_Growth factor receptor domain;HMMPfam_EGF_2;superfamily_C-type lectin-like;superfamily_EGF/Laminin;superfamily_FAS1 domain	-	no_errors
TDG	6996	genome.wustl.edu	36	12	102900832	102900832	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	12	102900832	102900832	G	T	SNP	TDG	NM_003211	human	genbank	54_36p	1	reviewed	missense	c.604	p.D202Y	1	HMMPfam_UDG	HMMPfam_UDG;superfamily_DNA glycosylase	-	no_errors
C12orf51	283450	genome.wustl.edu	36	12	111094866	111094866	+	Missense_Mutation	SNP	C	C	T		Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	12	111094866	111094866	C	T	SNP	C12orf51	NM_001109662	human	genbank	54_36p	-1	validated	missense	c.10511	p.C3504Y	1	NULL	-	-	no_errors
GPR133	283383	genome.wustl.edu	36	12	130016964	130016964	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	12	130016964	130016964	T	A	SNP	GPR133	NM_198827	human	genbank	54_36p	1	validated	missense	c.107	p.F36Y	1	NULL	HMMPfam_GPS;HMMPfam_7tm_2;superfamily_Concanavalin A-like lectins/glucanases;superfamily_Family A G protein-coupled receptor-like	-	no_errors
KIAA0528	9847	genome.wustl.edu	36	12	22513988	22513988	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	12	22513988	22513988	C	G	SNP	KIAA0528	NM_014802	human	genbank	54_36p	-1	predicted	missense	c.2455	p.D819H	1	NULL	-	-	no_errors
IFLTD1	160492	genome.wustl.edu	36	12	25570406	25570406	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	12	25570406	25570406	G	A	SNP	IFLTD1	NM_152590	human	genbank	54_36p	-1	validated	missense	c.629	p.A210V	0.4	NULL	-	-	no_errors
SCN8A	6334	genome.wustl.edu	36	12	50401778	50401778	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	12	50401778	50401778	G	A	SNP	SCN8A	NM_014191	human	genbank	54_36p	1	validated	missense	c.1817	p.R606Q	1	NULL	HMMPfam_IQ;HMMPfam_Ion_trans;HMMPfam_Na_trans_assoc;superfamily_EF-hand;superfamily_P-loop containing nucleoside triphosphate hydrolases;superfamily_Voltage-gated potassium channels	-	no_errors
ACSM4	341392	genome.wustl.edu	36	12	7348231	7348231	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	12	7348231	7348231	A	T	SNP	ACSM4	NM_001080454	human	genbank	54_36p	1	inferred	missense	c.37	p.I13F	0.02	NULL	-	-	no_errors
CAPS2	84698	genome.wustl.edu	36	12	73962383	73962383	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	12	73962383	73962383	T	G	SNP	CAPS2	NM_032606	human	genbank	54_36p	-1	validated	missense	c.888	p.K296N	1	NULL	-	-	no_errors
CSRP2	1466	genome.wustl.edu	36	12	75776877	75776877	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	12	75776877	75776877	C	A	SNP	CSRP2	NM_001321	human	genbank	54_36p	-1	reviewed	missense	c.568	p.V190F	1	NULL	HMMPfam_LIM;superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors
CEP290	80184	genome.wustl.edu	36	12	86989297	86989297	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	12	86989297	86989297	A	G	SNP	CEP290	NM_025114	human	genbank	54_36p	-1	reviewed	silent	c.5916	p.D1972	1	NULL	superfamily_Spectrin repeat;superfamily_Translin	-	no_errors
PLXNC1	10154	genome.wustl.edu	36	12	93099437	93099437	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	12	93099437	93099437	G	A	SNP	PLXNC1	NM_005761	human	genbank	54_36p	1	provisional	missense	c.1288	p.V430I	0.52	NULL	-	-	no_errors
SCYL2	55681	genome.wustl.edu	36	12	99232491	99232491	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	12	99232491	99232491	G	A	SNP	SCYL2	NM_017988	human	genbank	54_36p	1	provisional	missense	c.1063	p.G355R	1	NULL	-	-	no_errors
SACS	26278	genome.wustl.edu	36	13	22811870	22811870	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	13	22811870	22811870	T	C	SNP	SACS	NM_014363	human	genbank	54_36p	-1	validated	missense	c.3704	p.H1235R	1	NULL	-	-	no_errors
FREM2	341640	genome.wustl.edu	36	13	38256814	38256814	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	13	38256814	38256814	T	C	SNP	FREM2	NM_207361	human	genbank	54_36p	1	reviewed	missense	c.5888	p.I1963T	0.07	HMMPfam_Calx-beta	HMMPfam_Calx-beta;superfamily_Cadherin-like	-	no_errors
LOC642458	642458	genome.wustl.edu	36	14	18558349	18558349	+	RNA	SNP	T	T	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	14	18558349	18558349	T	A	SNP	LOC642458	XR_016116	human	genbank	54_36p	-1	model	rna	NULL	NULL	1	-	-	-	pseudogene
OR4N2	390429	genome.wustl.edu	36	14	19366355	19366355	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	14	19366355	19366355	A	T	SNP	OR4N2	NM_001004723	human	genbank	54_36p	1	provisional	missense	c.908	p.N303I		NULL	-	-	no_errors
HEATR5A	25938	genome.wustl.edu	36	14	30926116	30926116	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	14	30926116	30926116	C	G	SNP	HEATR5A	NM_015473	human	genbank	54_36p	-1	validated	missense	c.271	p.D91H	1	NULL	-	-	no_errors
AKAP6	9472	genome.wustl.edu	36	14	32363306	32363306	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	14	32363306	32363306	C	G	SNP	AKAP6	NM_004274	human	genbank	54_36p	1	reviewed	missense	c.6536	p.S2179C		NULL	superfamily_Spectrin repeat	-	no_errors
CCDC88C	440193	genome.wustl.edu	36	14	90841994	90841994	+	Silent	SNP	C	G	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	G	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	14	90841994	90841994	C	G	SNP	CCDC88C	NM_001080414	human	genbank	54_36p	-1	validated	silent	c.3225	p.L1075	1	NULL	-	-	no_errors
uc003vzj.1	0	genome.wustl.edu	36	7	141952571	141952571	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	7	141952571	141952571	A	G	SNP	uc003vzj.1	ENST00000390387	human	ensembl	54_36p	1	known	missense	c.74	p.Q25R	0.75	NULL	-	-	no_stop_codon:bad_bp_length_for_coding_region
FSIP1	161835	genome.wustl.edu	36	15	37843406	37843406	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	15	37843406	37843406	G	T	SNP	FSIP1	NM_152597	human	genbank	54_36p	-1	validated	missense	c.467	p.S156Y	0.14	NULL	-	-	no_errors
GLDN	342035	genome.wustl.edu	36	15	49474451	49474451	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	15	49474451	49474451	C	T	SNP	GLDN	NM_181789	human	genbank	54_36p	1	validated	silent	c.669	p.S223	1	NULL	-	-	no_errors
RNF111	54778	genome.wustl.edu	36	15	57172032	57172032	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	15	57172032	57172032	A	T	SNP	RNF111	NM_017610	human	genbank	54_36p	1	reviewed	missense	c.2744	p.K915I	1	NULL	HMMPfam_zf-C3HC4;superfamily_RING/U-box	-	no_errors
TRIP4	56238	genome.wustl.edu	36	15	62477071	62477071	+	Splice_Site	SNP	G	G	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	15	62477071	62477071	G	T	SNP	TRIP4	NM_016213	human	genbank	54_36p	1	validated	splice_site	c.618+1	e4+1	1	-	-	-	no_errors
PIAS1	8554	genome.wustl.edu	36	15	66221345	66221345	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	15	66221345	66221345	C	T	SNP	PIAS1	NM_016166	human	genbank	54_36p	1	reviewed	silent	c.477	p.D159	1	NULL	HMMPfam_SAP;HMMPfam_zf-MIZ;superfamily_RING/U-box	-	no_errors
HEXA	3073	genome.wustl.edu	36	15	70425947	70425947	+	Silent	SNP	G	A	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	A	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	15	70425947	70425947	G	A	SNP	HEXA	NM_000520	human	genbank	54_36p	-1	reviewed	silent	c.1305	p.Y435	0.95	HMMPfam_Glyco_hydro_20	HMMPfam_Glyco_hydro_20b;HMMPfam_Glyco_hydro_20;superfamily_(Trans)glycosidases;superfamily_beta-N-acetylhexosaminidase-like domain	-	no_errors
HCN4	10021	genome.wustl.edu	36	15	71423026	71423026	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	15	71423026	71423026	T	A	SNP	HCN4	NM_005477	human	genbank	54_36p	-1	reviewed	missense	c.962	p.E321V	1	NULL	-	-	no_errors
ALPK3	57538	genome.wustl.edu	36	15	83201845	83201845	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	15	83201845	83201845	G	C	SNP	ALPK3	NM_020778	human	genbank	54_36p	1	validated	missense	c.3478	p.D1160H	0.09	NULL	HMMPfam_Alpha_kinase;superfamily_Protein kinase-like (PK-like);HMMPfam_I-set;superfamily_Immunoglobulin	-	no_errors
UMOD	7369	genome.wustl.edu	36	16	20256187	20256187	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	16	20256187	20256187	G	C	SNP	UMOD	NM_001008389	human	genbank	54_36p	-1	reviewed	missense	c.1667	p.A556G	1	HMMPfam_Zona_pellucida	HMMPfam_Zona_pellucida;HMMPfam_EGF;HMMPfam_EGF_CA;superfamily_EGF/Laminin	-	no_errors
XPO6	23214	genome.wustl.edu	36	16	28099853	28099853	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	16	28099853	28099853	C	G	SNP	XPO6	NM_015171	human	genbank	54_36p	-1	provisional	missense	c.4	p.A2P	1	NULL	-	-	no_errors
DOC2A	8448	genome.wustl.edu	36	16	29928851	29928851	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	16	29928851	29928851	G	A	SNP	DOC2A	NM_003586	human	genbank	54_36p	-1	reviewed	missense	c.194	p.A65V	0.2	NULL	HMMPfam_C2;superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	-	no_errors
HYDIN	54768	genome.wustl.edu	36	16	69535298	69535298	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	16	69535298	69535298	G	C	SNP	HYDIN	NM_032821	human	genbank	54_36p	-1	validated	missense	c.6584	p.P2195R	0.49	NULL	-	-	no_errors
GAN	8139	genome.wustl.edu	36	16	79948921	79948921	+	Missense_Mutation	SNP	G	A	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	A	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	16	79948921	79948921	G	A	SNP	GAN	NM_022041	human	genbank	54_36p	1	reviewed	missense	c.857	p.R286Q	1	NULL	-	-	no_errors
ADORA2B	136	genome.wustl.edu	36	17	15819310	15819310	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	17	15819310	15819310	C	T	SNP	ADORA2B	NM_000676	human	genbank	54_36p	1	reviewed	missense	c.928	p.L310F	1	NULL	-	-	no_errors
RNF112	7732	genome.wustl.edu	36	17	19258027	19258027	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	17	19258027	19258027	G	A	SNP	RNF112	ENST00000299604	human	ensembl	54_36p	1	known	missense	c.853	p.D285N	1	NULL	-	-	no_errors
LOC646021	646021	genome.wustl.edu	36	17	26373157	26373157	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	17	26373157	26373157	G	T	SNP	LOC646021	XM_933339	human	genbank	54_36p	1	model	missense	c.810	p.Q270H	1	NULL	-	-	no_errors
PSMD3	5709	genome.wustl.edu	36	17	35405006	35405006	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	17	35405006	35405006	G	T	SNP	PSMD3	NM_002809	human	genbank	54_36p	1	reviewed	missense	c.1148	p.G383V	1	HMMPfam_PCI	"HMMPfam_PCI;HMMPfam_Rpn3_C;superfamily_""Winged helix"" DNA-binding domain;superfamily_TPR-like"	-	no_errors
LOC644397	644397	genome.wustl.edu	36	17	42450591	42450591	+	RNA	SNP	A	A	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	17	42450591	42450591	A	T	SNP	LOC644397	XR_042323	human	genbank	54_36p	1	model	rna	NULL	NULL		-	-	-	pseudogene
NXN	64359	genome.wustl.edu	36	17	672422	672422	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	17	672422	672422	C	T	SNP	NXN	NM_022463	human	genbank	54_36p	-1	validated	missense	c.638	p.R213Q	1	HMMPfam_AhpC-TSA	HMMPfam_AhpC-TSA;superfamily_Thioredoxin-like	-	no_errors
SLC16A11	162515	genome.wustl.edu	36	17	6885879	6885879	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	17	6885879	6885879	C	A	SNP	SLC16A11	NM_153357	human	genbank	54_36p	-1	provisional	missense	c.1259	p.S420I	1	NULL	-	-	no_errors
C1QTNF1	114897	genome.wustl.edu	36	17	74555347	74555347	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	17	74555347	74555347	G	A	SNP	C1QTNF1	NM_030968	human	genbank	54_36p	1	validated	missense	c.428	p.S143N	0.96	NULL	HMMPfam_C1q;HMMPfam_Collagen;superfamily_TNF-like	-	no_errors
TP53	7157	genome.wustl.edu	36	17	7519165	7519165	+	Missense_Mutation	SNP	T	C	C	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	T	T	C	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	17	7519165	7519165	T	C	SNP	TP53	NM_000546	human	genbank	54_36p	-1	reviewed	missense	c.490	p.K164E	1	HMMPfam_P53	superfamily_p53-like transcription factors;superfamily_p53 tetramerization domain;P53_tetramer;HMMPfam_P53_tetramer;P53;HMMPfam_P53;P53_TAD;HMMPfam_P53_TAD	-	no_errors
LOC728211	728211	genome.wustl.edu	36	18	12066319	12066319	+	RNA	SNP	A	A	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	18	12066319	12066319	A	T	SNP	LOC728211	XR_015403	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.98	-	-	-	pseudogene
CHST9	83539	genome.wustl.edu	36	18	22750360	22750360	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	18	22750360	22750360	C	T	SNP	CHST9	NM_031422	human	genbank	54_36p	-1	validated	missense	c.1193	p.R398K	1	NULL	-	-	no_errors
ACAA2	10449	genome.wustl.edu	36	18	45564297	45564297	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	18	45564297	45564297	C	G	SNP	ACAA2	NM_006111	human	genbank	54_36p	-1	reviewed	missense	c.1112	p.R371P	1	HMMPfam_Thiolase_C	HMMPfam_Thiolase_N;HMMPfam_Thiolase_C;superfamily_Thiolase-like	-	no_errors
KIAA0802	23255	genome.wustl.edu	36	18	8774735	8774735	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	18	8774735	8774735	C	A	SNP	KIAA0802	NM_015210	human	genbank	54_36p	1	predicted	missense	c.1625	p.P542H	1	NULL	-	-	no_errors
CYP4F12	66002	genome.wustl.edu	36	19	15654204	15654204	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	19	15654204	15654204	G	T	SNP	CYP4F12	NM_023944	human	genbank	54_36p	1	reviewed	missense	c.531	p.K177N	1	HMMPfam_p450	HMMPfam_p450;superfamily_Cytochrome P450	-	no_errors
ZNF90	7643	genome.wustl.edu	36	19	20077091	20077091	+	Silent	SNP	T	T	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	19	20077091	20077091	T	A	SNP	ZNF90	ENST00000300996	human	ensembl	54_36p	1	known	silent	c.192	p.T64		NULL	-	-	no_stop_codon
ZNF724P	440519	genome.wustl.edu	36	19	23197718	23197718	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	19	23197718	23197718	C	G	SNP	ZNF724P	ENST00000397097	human	ensembl	54_36p	-1	known	missense	c.833	p.G278A	1	NULL	-	-	no_start_codon:no_stop_codon
ZNF91	7644	genome.wustl.edu	36	19	23334796	23334796	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	19	23334796	23334796	T	G	SNP	ZNF91	NM_003430	human	genbank	54_36p	-1	validated	missense	c.2825	p.E942A	0.04	HMMPfam_zf-C2H2	HMMPfam_KRAB;HMMPfam_zf-C2H2;superfamily_KRAB domain (Kruppel-associated box Pfam 01352);superfamily_C2H2 and C2HC zinc fingers	-	no_errors
FAM187B	148109	genome.wustl.edu	36	19	40411150	40411150	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	19	40411150	40411150	G	A	SNP	FAM187B	NM_152481	human	genbank	54_36p	-1	provisional	missense	c.274	p.L92F		NULL	-	-	no_errors
RYR1	6261	genome.wustl.edu	36	19	43690218	43690218	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	19	43690218	43690218	C	G	SNP	RYR1	NM_000540	human	genbank	54_36p	1	reviewed	missense	c.8843	p.S2948W	1	NULL	HMMPfam_RYDR_ITPR;HMMPfam_RyR;HMMPfam_MIR;HMMPfam_SPRY;HMMPfam_Ion_trans;HMMPfam_RR_TM4-6;HMMPfam_RIH_assoc;HMMPfam_Ins145_P3_rec;superfamily_EF-hand;superfamily_MIR domain (Pfam 02815)	-	no_errors
NUMBL	9253	genome.wustl.edu	36	19	45880683	45880683	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	19	45880683	45880683	G	A	SNP	NUMBL	NM_004756	human	genbank	54_36p	-1	validated	missense	c.280	p.R94W	1	HMMPfam_PID	HMMPfam_PID;HMMPfam_NumbF;superfamily_PH domain-like	-	no_errors
B9D2	80776	genome.wustl.edu	36	19	46555746	46555746	+	Nonsense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	19	46555746	46555746	G	T	SNP	B9D2	NM_030578	human	genbank	54_36p	-1	provisional	nonsense	c.110	p.S37*	0.98	NULL	-	-	no_errors
MYH14	79784	genome.wustl.edu	36	19	55496777	55496777	+	Silent	SNP	C	C	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	19	55496777	55496777	C	G	SNP	MYH14	NM_001077186	human	genbank	54_36p	1	reviewed	silent	c.5418	p.A1806	1	NULL	-	-	no_errors
KLK3	354	genome.wustl.edu	36	19	56053124	56053124	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	19	56053124	56053124	C	A	SNP	KLK3	NM_001648	human	genbank	54_36p	1	reviewed	missense	c.234	p.H78Q	0.21	HMMPfam_Trypsin	HMMPfam_Trypsin;superfamily_Trypsin-like serine proteases	-	no_errors
SIGLEC8	27181	genome.wustl.edu	36	19	56649775	56649775	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	19	56649775	56649775	G	T	SNP	SIGLEC8	NM_014442	human	genbank	54_36p	-1	validated	missense	c.1123	p.L375M	0.11	NULL	-	-	no_errors
ZNF613	79898	genome.wustl.edu	36	19	57140701	57140701	+	Silent	SNP	T	T	C	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	19	57140701	57140701	T	C	SNP	ZNF613	NM_001031721	human	genbank	54_36p	1	provisional	silent	c.1753	p.L585		NULL	-	-	no_errors
NLRP12	91662	genome.wustl.edu	36	19	59006346	59006346	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	19	59006346	59006346	C	T	SNP	NLRP12	NM_144687	human	genbank	54_36p	-1	reviewed	missense	c.379	p.E127K	0.28	NULL	-	-	no_errors
BRSK1	84446	genome.wustl.edu	36	19	60497400	60497400	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	19	60497400	60497400	C	A	SNP	BRSK1	NM_032430	human	genbank	54_36p	1	validated	silent	c.582	p.P194	1	HMMPfam_Pkinase	HMMPfam_Pkinase;superfamily_Protein kinase-like (PK-like)	-	no_errors
NLRP13	126204	genome.wustl.edu	36	19	61115783	61115783	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	19	61115783	61115783	T	A	SNP	NLRP13	NM_176810	human	genbank	54_36p	-1	validated	missense	c.1212	p.E404D		NULL	HMMPfam_LRR_1;HMMPfam_PAAD_DAPIN;HMMPfam_NACHT;superfamily_DEATH domain;superfamily_RNI-like;superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ZNF583	147949	genome.wustl.edu	36	19	61617528	61617528	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	19	61617528	61617528	G	T	SNP	ZNF583	NM_152478	human	genbank	54_36p	1	provisional	missense	c.139	p.V47F		NULL	HMMPfam_zf-C2H2;superfamily_KRAB domain (Kruppel-associated box Pfam 01352);superfamily_C2H2 and C2HC zinc fingers;HMMPfam_KRAB	-	no_errors
ZNF324B	388569	genome.wustl.edu	36	19	63659017	63659017	+	Silent	SNP	G	G	C	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	19	63659017	63659017	G	C	SNP	ZNF324B	NM_207395	human	genbank	54_36p	1	validated	silent	c.894	p.S298		HMMPfam_zf-C2H2	HMMPfam_zf-C2H2;superfamily_KRAB domain (Kruppel-associated box Pfam 01352);superfamily_C2H2 and C2HC zinc fingers;HMMPfam_KRAB	-	no_errors
OR7D2	162998	genome.wustl.edu	36	19	9157785	9157785	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	19	9157785	9157785	C	G	SNP	OR7D2	NM_175883	human	genbank	54_36p	1	provisional	missense	c.328	p.L110V		NULL	-	-	no_errors
NPAS2	4862	genome.wustl.edu	36	2	100931172	100931172	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	2	100931172	100931172	A	G	SNP	NPAS2	NM_002518	human	genbank	54_36p	1	reviewed	missense	c.407	p.Q136R	1	HMMPfam_PAS	HMMPfam_HLH;superfamily_HLH helix-loop-helix DNA-binding domain;HMMPfam_PAS_3;HMMPfam_PAS;superfamily_PYP-like sensor domain (PAS domain)	-	no_errors
PSD4	23550	genome.wustl.edu	36	2	113660286	113660286	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	2	113660286	113660286	C	G	SNP	PSD4	NM_012455	human	genbank	54_36p	1	validated	missense	c.1611	p.H537Q		NULL	-	-	no_errors
UGGT1	56886	genome.wustl.edu	36	2	128603092	128603092	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	2	128603092	128603092	A	G	SNP	UGCGL1	NM_020120	human	genbank	54_36p	1	validated	missense	c.1246	p.N416D	1	NULL	HMMPfam_UDP-g_GGTase;superfamily_Nucleotide-diphospho-sugar transferases	-	no_errors
TTN	7273	genome.wustl.edu	36	2	179174109	179174109	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	2	179174109	179174109	G	T	SNP	TTN	NM_133378	human	genbank	54_36p	-1	reviewed	silent	c.48063	p.G16021	1	NULL	-	-	pseudogene:no_stop_codon:bad_bp_length_for_coding_region
ASNSD1	54529	genome.wustl.edu	36	2	190239831	190239831	+	Missense_Mutation	SNP	C	C	A		Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	2	190239831	190239831	C	A	SNP	ASNSD1	NM_019048	human	genbank	54_36p	1	validated	missense	c.728	p.P243H	0.997	NULL	-	-	no_errors
HECW2	57520	genome.wustl.edu	36	2	197006214	197006214	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	2	197006214	197006214	C	T	SNP	HECW2	NM_020760	human	genbank	54_36p	-1	provisional	missense	c.179	p.S60N	1	NULL	HMMPfam_C2;HMMPfam_HECT;HMMPfam_WW;superfamily_WW domain;superfamily_C2 domain (Calcium/lipid-binding domain CaLB);superfamily_Hect E3 ligase catalytic domain	-	no_errors
PTPRN	5798	genome.wustl.edu	36	2	219871007	219871007	+	Silent	SNP	C	C	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	2	219871007	219871007	C	G	SNP	PTPRN	NM_002846	human	genbank	54_36p	-1	reviewed	silent	c.1731	p.V577	1	NULL	HMMPfam_Y_phosphatase;superfamily_(Phosphotyrosine protein) phosphatases II	-	no_errors
GPR55	9290	genome.wustl.edu	36	2	231483234	231483234	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	2	231483234	231483234	C	G	SNP	GPR55	NM_005683	human	genbank	54_36p	-1	validated	missense	c.688	p.A230P		NULL	-	-	no_errors
SCLY	51540	genome.wustl.edu	36	2	238656632	238656632	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	2	238656632	238656632	A	T	SNP	SCLY	NM_016510	human	genbank	54_36p	1	validated	missense	c.782	p.Y261F	1	HMMPfam_Aminotran_5	HMMPfam_Aminotran_5;superfamily_PLP-dependent transferases	-	no_errors
ADCY3	109	genome.wustl.edu	36	2	24904517	24904517	+	Nonsense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	2	24904517	24904517	G	T	SNP	ADCY3	NM_004036	human	genbank	54_36p	-1	reviewed	nonsense	c.2190	p.Y730*	1	NULL	HMMPfam_Guanylate_cyc;superfamily_Adenylyl and guanylyl cyclase catalytic domain	-	no_errors
LTBP1	4052	genome.wustl.edu	36	2	33393840	33393840	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	2	33393840	33393840	G	A	SNP	LTBP1	NM_206943	human	genbank	54_36p	1	reviewed	missense	c.3733	p.D1245N	1	HMMPfam_EGF_CA	HMMPfam_EGF_CA;superfamily_EGF/Laminin;superfamily_TB module/8-cys domain;HMMPfam_TB;HMMPfam_EGF	-	no_errors
MTA3	57504	genome.wustl.edu	36	2	42789748	42789748	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	2	42789748	42789748	G	T	SNP	MTA3	NM_020744	human	genbank	54_36p	1	provisional	missense	c.1533	p.M511I	1	NULL	-	-	no_errors
LOC729317	729317	genome.wustl.edu	36	2	65286552	65286552	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	2	65286552	65286552	T	A	SNP	LOC729317	XM_001133585	human	genbank	54_36p	1	model	missense	c.806	p.L269H	0.86	NULL	-	-	no_errors
HK2	3099	genome.wustl.edu	36	2	74935084	74935084	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	2	74935084	74935084	G	T	SNP	HK2	NM_000189	human	genbank	54_36p	1	reviewed	missense	c.220	p.G74W	1	HMMPfam_Hexokinase_1	superfamily_Actin-like ATPase domain;HMMPfam_Hexokinase_1;HMMPfam_Hexokinase_2	-	no_errors
RIMS4	140730	genome.wustl.edu	36	20	42818332	42818332	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	20	42818332	42818332	G	A	SNP	RIMS4	NM_182970	human	genbank	54_36p	-1	validated	silent	c.667	p.L223	1	NULL	-	-	no_errors
RIMS4	140730	genome.wustl.edu	36	20	42818333	42818333	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	20	42818333	42818333	C	G	SNP	RIMS4	NM_182970	human	genbank	54_36p	-1	validated	missense	c.666	p.E222D	1	NULL	-	-	no_errors
PTGIS	5740	genome.wustl.edu	36	20	47564276	47564276	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	20	47564276	47564276	C	A	SNP	PTGIS	NM_000961	human	genbank	54_36p	-1	reviewed	missense	c.919	p.A307S	0.98	HMMPfam_p450	HMMPfam_p450;superfamily_Cytochrome P450	-	no_errors
TIAM1	7074	genome.wustl.edu	36	21	31560651	31560651	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	21	31560651	31560651	G	A	SNP	TIAM1	NM_003253	human	genbank	54_36p	-1	validated	missense	c.509	p.S170F	1	NULL	HMMPfam_RhoGEF;HMMPfam_PDZ;superfamily_PDZ domain-like;HMMPfam_PH;HMMPfam_RBD;superfamily_DBL homology domain (DH-domain);superfamily_PH domain-like;superfamily_Ubiquitin-like	-	no_errors
C21orf63	59271	genome.wustl.edu	36	21	32809077	32809077	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	21	32809077	32809077	A	G	SNP	C21orf63	NM_058187	human	genbank	54_36p	1	validated	silent	c.1032	p.R344	0.13	NULL	HMMPfam_Gal_Lectin	-	no_errors
XKR3	150165	genome.wustl.edu	36	22	15645233	15645233	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	22	15645233	15645233	A	G	SNP	XKR3	NM_175878	human	genbank	54_36p	-1	validated	missense	c.656	p.I219T	1	NULL	-	-	no_errors
RGL4	266747	genome.wustl.edu	36	22	22368801	22368801	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	22	22368801	22368801	G	T	SNP	RGL4	NM_153615	human	genbank	54_36p	1	provisional	missense	c.1087	p.A363S	0.59	NULL	-	-	no_errors
PLA2G6	8398	genome.wustl.edu	36	22	36839528	36839528	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	22	36839528	36839528	C	T	SNP	PLA2G6	NM_003560	human	genbank	54_36p	-1	reviewed	missense	c.2114	p.C705Y	1	NULL	HMMPfam_Ank;superfamily_Ankyrin repeat;HMMPfam_Patatin;superfamily_FabD/lysophospholipase-like	-	no_errors
WBP2NL	164684	genome.wustl.edu	36	22	40745687	40745687	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	22	40745687	40745687	C	G	SNP	WBP2NL	NM_152613	human	genbank	54_36p	1	validated	missense	c.247	p.L83V	0.95	NULL	-	-	no_errors
ENSG00000223116	0	genome.wustl.edu	36	13	22450013	22450013	+	RNA	SNP	C	C	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	13	22450013	22450013	C	T	SNP	ENSG00000223116	ENST00000411184	human	ensembl	54_36p	-1	novel	rna	NULL	NULL		-	-	-	no_errors
GPR128	84873	genome.wustl.edu	36	3	101896480	101896480	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	3	101896480	101896480	C	T	SNP	GPR128	NM_032787	human	genbank	54_36p	1	provisional	missense	c.2339	p.P780L		NULL	-	-	no_errors
LOC285359	285359	genome.wustl.edu	36	3	102914651	102914651	+	RNA	SNP	A	A	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	3	102914651	102914651	A	G	SNP	LOC285359	NR_002941	human	genbank	54_36p	1	validated	rna	NULL	NULL	1	-	-	-	pseudogene
ZBTB20	26137	genome.wustl.edu	36	3	115540682	115540682	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	3	115540682	115540682	G	T	SNP	ZBTB20	NM_015642	human	genbank	54_36p	-1	provisional	missense	c.1867	p.P623T	0.98	NULL	-	-	no_errors
ZXDC	79364	genome.wustl.edu	36	3	127673755	127673755	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	3	127673755	127673755	A	G	SNP	ZXDC	NM_025112	human	genbank	54_36p	-1	validated	missense	c.991	p.S331P	1	NULL	-	-	no_errors
C3orf25	90288	genome.wustl.edu	36	3	130623314	130623314	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	3	130623314	130623314	G	A	SNP	C3orf25	NM_207307	human	genbank	54_36p	-1	predicted	silent	c.72	p.P24		NULL	-	-	no_errors
COPB2	9276	genome.wustl.edu	36	3	140559794	140559794	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	3	140559794	140559794	C	T	SNP	COPB2	NM_004766	human	genbank	54_36p	-1	validated	missense	c.2563	p.G855R	0.9	NULL	-	-	no_errors
KLHL6	89857	genome.wustl.edu	36	3	184692984	184692984	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	3	184692984	184692984	T	C	SNP	KLHL6	NM_130446	human	genbank	54_36p	-1	validated	missense	c.1556	p.Y519C	1	NULL	-	-	no_errors
EIF4G1	1981	genome.wustl.edu	36	3	185525419	185525419	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	3	185525419	185525419	G	T	SNP	EIF4G1	NM_182917	human	genbank	54_36p	1	reviewed	silent	c.2679	p.R893	1	HMMPfam_MIF4G	HMMPfam_W2;HMMPfam_MIF4G;HMMPfam_MA3;superfamily_ARM repeat	-	no_errors
CELSR3	1951	genome.wustl.edu	36	3	48664427	48664427	+	Missense_Mutation	SNP	C	G	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	G	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	3	48664427	48664427	C	G	SNP	CELSR3	NM_001407	human	genbank	54_36p	-1	reviewed	missense	c.5810	p.R1937P	0.09	NULL	HMMPfam_GPS,HMMPfam_7tm_2,HMMPfam_HRM,HMMPfam_Laminin_EGF,HMMPfam_Cadherin,HMMPfam_EGF,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,superfamily_Cadherin-like,superfamily_EGF/Laminin	-	no_errors
ENSG00000217332	0	genome.wustl.edu	36	10	31018437	31018437	+	Splice_Site	SNP	A	A	C	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	10	31018437	31018437	A	C	SNP	ENSG00000217332	ENST00000404846	human	ensembl	54_36p	1	known	splice_site	c.NULL	NULL	1	-	-	-	no_coding_region:pseudogene
FAT1	2195	genome.wustl.edu	36	4	187777672	187777672	+	Silent	SNP	C	T	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	T	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	4	187777672	187777672	C	T	SNP	FAT1	NM_005245	human	genbank	54_36p	-1	reviewed	silent	c.7062	p.R2354	0.94	NULL	-	-	no_errors
LPHN3	23284	genome.wustl.edu	36	4	62281453	62281453	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	4	62281453	62281453	T	A	SNP	LPHN3	NM_015236	human	genbank	54_36p	1	reviewed	missense	c.781	p.S261T	1	NULL	-	-	no_errors
LOC644556	644556	genome.wustl.edu	36	4	63366880	63366880	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	4	63366880	63366880	G	A	SNP	LOC644556	XM_001719457	human	genbank	54_36p	1	model	missense	c.814	p.D272N	1	NULL	-	-	no_errors
PPBP	5473	genome.wustl.edu	36	4	75072542	75072542	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	4	75072542	75072542	C	A	SNP	PPBP	NM_002704	human	genbank	54_36p	-1	reviewed	missense	c.143	p.G48V		NULL	HMMPfam_IL8;superfamily_Interleukin 8-like chemokines	-	no_errors
BMP3	651	genome.wustl.edu	36	4	82186049	82186049	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	4	82186049	82186049	A	G	SNP	BMP3	NM_001201	human	genbank	54_36p	1	reviewed	silent	c.450	p.G150	0.01	NULL	HMMPfam_TGF_beta;superfamily_Cystine-knot cytokines	-	no_errors
HELQ	113510	genome.wustl.edu	36	4	84556968	84556968	+	Silent	SNP	G	G	C	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	4	84556968	84556968	G	C	SNP	HELQ	NM_133636	human	genbank	54_36p	-1	validated	silent	c.3138	p.L1046	0.93	NULL	HMMPfam_Helicase_C;superfamily_Rad51 N-terminal domain-like;HMMPfam_DEAD;superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
PTPN13	5783	genome.wustl.edu	36	4	87874919	87874919	+	Missense_Mutation	SNP	C	C	T		Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	4	87874919	87874919	C	T	SNP	PTPN13	NM_080685	human	genbank	54_36p	1	reviewed	missense	c.2018	p.T673I	0.815	HMMPfam_Band_41	HMMPfam_Y_phosphatase,HMMPfam_Band_41,HMMPfam_PDZ,superfamily_PDZ domain-like,superfamily_PAZ domain,superfamily_Second domain of FERM,superfamily_PH domain-like,superfamily_(Phosphotyrosine protein) phosphatases II,superfamily_Ubiquitin-like	-	no_errors
HPGDS	27306	genome.wustl.edu	36	4	95458112	95458112	+	Frame_Shift_Del	DEL	A	A	-		Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	-	A	A	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	4	95458112	95458112	A	-	DEL	PGDS	NM_014485	human	genbank	54_36p	-1	reviewed	frame_shift_del	c.161	p.L54fs	1	HMMPfam_GST_N	HMMPfam_GST_N,HMMPfam_GST_C,superfamily_Glutathione S-transferase (GST) C-terminal domain,superfamily_Thioredoxin-like	(deletion:cds_exon[95458047,95458139])	no_errors
APC	324	genome.wustl.edu	36	5	112202549	112202549	+	Missense_Mutation	SNP	G	G	A	rs28933379	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	5	112202549	112202549	G	A	SNP	APC	NM_000038	human	genbank	54_36p	1	reviewed	missense	c.3359	p.G1120E	1	NULL	Arm;HMMPfam_Arm;APC_crr;HMMPfam_APC_crr;SAMP;HMMPfam_SAMP;EB1_binding;HMMPfam_EB1_binding;APC_basic;HMMPfam_APC_basic;APC_15aa;HMMPfam_APC_15aa	-	no_errors
APC	324	genome.wustl.edu	36	5	112205204	112205204	+	Nonsense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	5	112205204	112205204	C	G	SNP	APC	NM_000038	human	genbank	54_36p	1	reviewed	nonsense	c.6014	p.S2005*	0.66	NULL	Arm;HMMPfam_Arm;APC_crr;HMMPfam_APC_crr;SAMP;HMMPfam_SAMP;EB1_binding;HMMPfam_EB1_binding;APC_basic;HMMPfam_APC_basic;APC_15aa;HMMPfam_APC_15aa	-	no_errors
ADAMTS19	171019	genome.wustl.edu	36	5	129065169	129065169	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	5	129065169	129065169	G	A	SNP	ADAMTS19	NM_133638	human	genbank	54_36p	1	reviewed	silent	c.3126	p.A1042	0.62	NULL	-	-	no_errors
PCDHB7	56129	genome.wustl.edu	36	5	140534337	140534337	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	5	140534337	140534337	G	A	SNP	PCDHB7	NM_018940	human	genbank	54_36p	1	reviewed	silent	c.1737	p.A579	0.01	NULL	-	-	no_errors
PCDHB15	56121	genome.wustl.edu	36	5	140606896	140606896	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	5	140606896	140606896	G	C	SNP	PCDHB15	NM_018935	human	genbank	54_36p	1	reviewed	missense	c.1566	p.E522D	0.26	HMMPfam_Cadherin	HMMPfam_Cadherin;HMMPfam_Cadherin_2;superfamily_Cadherin-like	-	no_errors
PCDH1	5097	genome.wustl.edu	36	5	141223560	141223560	+	Silent	SNP	C	C	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	5	141223560	141223560	C	G	SNP	PCDH1	NM_032420	human	genbank	54_36p	-1	reviewed	silent	c.2520	p.G840	1	NULL	-	-	no_errors
ADRB2	154	genome.wustl.edu	36	5	148187638	148187638	+	Frame_Shift_Del	DEL	G	G	-	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	-	G	G	Unknown	Valid	Somatic	4	Capture	Sanger_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	5	148187638	148187638	G	-	DEL	ADRB2	NM_000024	human	genbank	54_36p	1	validated	frame_shift_del	c.1051	p.N352fs	0.17	NULL	HMMPfam_7tm_1;superfamily_Family A G protein-coupled receptor-like	(deletion:cds_exon[148186588;148187829])	no_errors
SH3TC2	79628	genome.wustl.edu	36	5	148372410	148372410	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	5	148372410	148372410	T	A	SNP	SH3TC2	NM_024577	human	genbank	54_36p	-1	reviewed	missense	c.3134	p.E1045V	1	NULL	-	-	no_errors
ITK	3702	genome.wustl.edu	36	5	156582560	156582560	+	Missense_Mutation	SNP	A	A	C		Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	5	156582560	156582560	A	C	SNP	ITK	NM_005546	human	genbank	54_36p	1	reviewed	missense	c.605	p.D202A	1	HMMPfam_SH3_1	SH2,HMMPfam_SH2,Pkinase_Tyr,HMMPfam_Pkinase_Tyr,SH3_1,HMMPfam_SH3_1,BTK,HMMPfam_BTK,PH,HMMPfam_PH	-	no_errors
GABRG2	2566	genome.wustl.edu	36	5	161457389	161457389	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	5	161457389	161457389	C	A	SNP	GABRG2	NM_198904	human	genbank	54_36p	1	reviewed	silent	c.495	p.T165	0.96	HMMPfam_Neur_chan_LBD	HMMPfam_Neur_chan_memb;HMMPfam_Neur_chan_LBD;superfamily_Nicotinic receptor ligand binding domain-like;superfamily_Neurotransmitter-gated ion-channel transmembrane pore	-	no_errors
RASGEF1C	255426	genome.wustl.edu	36	5	179478982	179478982	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	5	179478982	179478982	C	T	SNP	RASGEF1C	NM_175062	human	genbank	54_36p	-1	validated	missense	c.877	p.G293S	1	NULL	-	-	no_errors
ENC1	8507	genome.wustl.edu	36	5	73967028	73967028	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	5	73967028	73967028	C	G	SNP	ENC1	NM_003633	human	genbank	54_36p	-1	validated	missense	c.1039	p.G347R	1	HMMPfam_Kelch_1	HMMPfam_Kelch_1,superfamily_Galactose oxidase central domain,HMMPfam_BACK,HMMPfam_BTB,superfamily_POZ domain	-	no_errors
MIR518A2	574491	genome.wustl.edu	36	19	58934421	58934421	+	RNA	SNP	G	G	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	19	58934421	58934421	G	T	SNP	MIRN518A2	ENST00000384966	human	ensembl	54_36p	1	known	rna	NULL	NULL		-	-	-	no_errors
PDSS2	57107	genome.wustl.edu	36	6	107673480	107673480	+	Missense_Mutation	SNP	C	C	G		Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	6	107673480	107673480	C	G	SNP	PDSS2	NM_020381	human	genbank	54_36p	-1	validated	missense	c.667	p.V223L	1	NULL	-	-	no_errors
ENPP1	5167	genome.wustl.edu	36	6	132212840	132212840	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	6	132212840	132212840	C	T	SNP	ENPP1	NM_006208	human	genbank	54_36p	1	reviewed	missense	c.175	p.R59C	1	HMMPfam_Somatomedin_B	HMMPfam_Somatomedin_B;HMMPfam_Phosphodiest;superfamily_Alkaline phosphatase-like;superfamily_His-Me finger endonucleases;superfamily_Somatomedin B domain	-	no_errors
PEX3	8504	genome.wustl.edu	36	6	143834393	143834393	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	6	143834393	143834393	C	G	SNP	PEX3	NM_003630	human	genbank	54_36p	1	reviewed	missense	c.530	p.T177R	0.996	NULL	-	-	no_errors
UST	10090	genome.wustl.edu	36	6	149384304	149384304	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	6	149384304	149384304	G	C	SNP	UST	NM_005715	human	genbank	54_36p	1	validated	missense	c.931	p.D311H	1	HMMPfam_HS2ST	HMMPfam_HS2ST;superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
FAM120B	84498	genome.wustl.edu	36	6	170555583	170555584	+	Frame_Shift_Ins	INS	-	-	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	-	-	-	T	-	-	Unknown	Valid	Somatic	4	Capture	Sanger_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	6	170555583	170555584	-	T	INS	FAM120B	NM_032448	human	genbank	54_36p	1	provisional	frame_shift_ins	c.2713_2714	p.D905fs	0.913:0.942	NULL	-	-	no_errors
TNF	7124	genome.wustl.edu	36	6	31653042	31653042	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	6	31653042	31653042	C	T	SNP	TNF	NM_000594	human	genbank	54_36p	1	reviewed	missense	c.451	p.L151F	0.96	HMMPfam_TNF	HMMPfam_TNF;superfamily_TNF-like	-	no_errors
COL11A2	1302	genome.wustl.edu	36	6	33262425	33262425	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	6	33262425	33262425	G	T	SNP	COL11A2	NM_080680	human	genbank	54_36p	-1	reviewed	missense	c.755	p.P252Q	0.77	NULL	-	-	no_errors
RXRB	6257	genome.wustl.edu	36	6	33271352	33271352	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	6	33271352	33271352	G	A	SNP	RXRB	NM_021976	human	genbank	54_36p	-1	reviewed	missense	c.1229	p.S410L	0.966	HMMPfam_Hormone_recep	HMMPfam_Hormone_recep,HMMPfam_zf-C4,superfamily_Nuclear receptor ligand-binding domain,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors
ABCC10	89845	genome.wustl.edu	36	6	43508756	43508756	+	Nonsense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	6	43508756	43508756	C	T	SNP	ABCC10	NM_033450	human	genbank	54_36p	1	reviewed	nonsense	c.931	p.Q311*	0.97	HMMPfam_ABC_membrane	HMMPfam_ABC_membrane;HMMPfam_ABC_tran;superfamily_P-loop containing nucleoside triphosphate hydrolases;superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain	-	no_errors
DEFB114	245928	genome.wustl.edu	36	6	50036110	50036110	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	6	50036110	50036110	T	A	SNP	DEFB114	NM_001037499	human	genbank	54_36p	-1	provisional	missense	c.64	p.T22S		NULL	-	-	no_errors
COL9A1	1297	genome.wustl.edu	36	6	71068485	71068485	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	6	71068485	71068485	A	T	SNP	COL9A1	NM_001851	human	genbank	54_36p	-1	reviewed	missense	c.28	p.F10I	1	NULL	-	-	no_errors
RRAGD	58528	genome.wustl.edu	36	6	90145745	90145745	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	6	90145745	90145745	T	C	SNP	RRAGD	NM_021244	human	genbank	54_36p	-1	validated	missense	c.676	p.I226V	1	NULL	-	-	no_errors
MANEA	79694	genome.wustl.edu	36	6	96141209	96141209	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	6	96141209	96141209	A	T	SNP	MANEA	NM_024641	human	genbank	54_36p	1	validated	missense	c.173	p.N58I		NULL	-	-	no_errors
LRCH4	4034	genome.wustl.edu	36	7	100011832	100011832	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	7	100011832	100011832	G	T	SNP	LRCH4	NM_002319	human	genbank	54_36p	-1	reviewed	missense	c.1603	p.P535T		HMMPfam_CH	HMMPfam_LRR_1;HMMPfam_CH;superfamily_Calponin-homology domain CH-domain;superfamily_L domain-like	-	no_errors
FBXO24	26261	genome.wustl.edu	36	7	100025873	100025873	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	7	100025873	100025873	G	C	SNP	FBXO24	NM_033506	human	genbank	54_36p	1	reviewed	missense	c.279	p.Q93H	1	NULL	HMMPfam_F-box;superfamily_RCC1/BLIP-II;superfamily_F-box domain	-	no_errors
MUC17	140453	genome.wustl.edu	36	7	100470712	100470712	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	7	100470712	100470712	A	T	SNP	MUC17	NM_001040105	human	genbank	54_36p	1	provisional	missense	c.9295	p.T3099S	0.06	NULL	HMMPfam_SEA;superfamily_EGF/Laminin;superfamily_SEA domain	-	no_errors
WNT2	7472	genome.wustl.edu	36	7	116724987	116724987	+	Silent	SNP	A	A	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	7	116724987	116724987	A	T	SNP	WNT2	NM_003391	human	genbank	54_36p	-1	reviewed	silent	c.768	p.A256	0.98	HMMPfam_wnt	wnt;HMMPfam_wnt	-	no_errors
PAX4	5078	genome.wustl.edu	36	7	127040334	127040334	+	Silent	SNP	G	G	C	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	7	127040334	127040334	G	C	SNP	PAX4	NM_006193	human	genbank	54_36p	-1	reviewed	silent	c.669	p.L223	1	NULL	-	-	no_errors
CHRM2	1129	genome.wustl.edu	36	7	136350436	136350436	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	7	136350436	136350436	T	G	SNP	CHRM2	NM_000739	human	genbank	54_36p	1	reviewed	missense	c.284	p.V95G	1	NULL	-	-	no_errors
DENND2A	27147	genome.wustl.edu	36	7	139947739	139947739	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	7	139947739	139947739	A	C	SNP	DENND2A	NM_015689	human	genbank	54_36p	-1	validated	missense	c.928	p.S310A	1	NULL	HMMPfam_DENN;HMMPfam_dDENN;HMMPfam_uDENN	-	no_errors
GIMAP5	55340	genome.wustl.edu	36	7	150070313	150070313	+	Silent	SNP	C	C	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	Sanger_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	7	150070313	150070313	C	G	SNP	GIMAP5	NM_018384	human	genbank	54_36p	1	reviewed	silent	c.153	p.P51		NULL	-	-	no_errors
ABP1	26	genome.wustl.edu	36	7	150188644	150188644	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	7	150188644	150188644	T	C	SNP	ABP1	NM_001091	human	genbank	54_36p	1	reviewed	missense	c.1979	p.I660T	1	HMMPfam_Cu_amine_oxid	HMMPfam_Cu_amine_oxid;superfamily_Amine oxidase catalytic domain;HMMPfam_Cu_amine_oxidN2;HMMPfam_Cu_amine_oxidN3;superfamily_Amine oxidase N-terminal region	-	no_errors
C7orf16	10842	genome.wustl.edu	36	7	31713361	31713361	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	7	31713361	31713361	A	G	SNP	C7orf16	NM_006658	human	genbank	54_36p	1	validated	missense	c.407	p.D136G	0.91	NULL	-	-	no_errors
BMPER	168667	genome.wustl.edu	36	7	33943483	33943483	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	7	33943483	33943483	C	G	SNP	BMPER	NM_133468	human	genbank	54_36p	1	validated	missense	c.277	p.L93V	1	NULL	-	-	no_errors
C7orf62	219557	genome.wustl.edu	36	7	88261851	88261851	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	7	88261851	88261851	A	G	SNP	MGC26647	NM_152706	human	genbank	54_36p	-1	predicted	silent	c.342	p.Y114		NULL	-	-	no_errors
COL1A2	1278	genome.wustl.edu	36	7	93892885	93892885	+	Missense_Mutation	SNP	G	G	A		Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	7	93892885	93892885	G	A	SNP	COL1A2	NM_000089	human	genbank	54_36p	1	reviewed	missense	c.2809	p.G937S	1	HMMPfam_Collagen	HMMPfam_Collagen,Fibrinogen C-terminal domain-like,superfamily_Fibrinogen C-terminal domain-like,COLFI,HMMPfam_COLFI,Collagen	-	no_errors
ASNS	440	genome.wustl.edu	36	7	97320320	97320320	+	Nonsense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	7	97320320	97320320	G	C	SNP	ASNS	NM_001673	human	genbank	54_36p	-1	reviewed	nonsense	c.1464	p.Y488*	0.86	NULL	HMMPfam_GATase_2;HMMPfam_Asn_synthase;superfamily_Adenine nucleotide alpha hydrolases-like;superfamily_N-terminal nucleophile aminohydrolases (Ntn hydrolases)	-	no_errors
LMTK2	22853	genome.wustl.edu	36	7	97671325	97671325	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	7	97671325	97671325	G	A	SNP	LMTK2	NM_014916	human	genbank	54_36p	1	validated	silent	c.4374	p.T1458	0.01	NULL	Pkinase_Tyr;HMMPfam_Pkinase_Tyr	-	no_errors
TAF6	6878	genome.wustl.edu	36	7	99547786	99547786	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	7	99547786	99547786	G	T	SNP	TAF6	NM_005641	human	genbank	54_36p	-1	reviewed	missense	c.601	p.L201M	0.84	NULL	superfamily_Seven-hairpin glycosidases;HMMPfam_TAF;superfamily_Histone-fold;HMMPfam_DUF1546	-	no_errors
ABRA	137735	genome.wustl.edu	36	8	107851408	107851408	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	8	107851408	107851408	G	T	SNP	ABRA	NM_139166	human	genbank	54_36p	-1	validated	missense	c.187	p.P63T		NULL	-	-	no_errors
PKHD1L1	93035	genome.wustl.edu	36	8	110599579	110599579	+	Frame_Shift_Del	DEL	C	C	-	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	-	C	C	Unknown	Valid	Somatic	4	Capture	Sanger_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	8	110599579	110599579	C	-	DEL	PKHD1L1	NM_177531	human	genbank	54_36p	1	validated	frame_shift_del	c.11697	p.L3900fs	0.53	NULL	HMMPfam_TIG;superfamily_Cupredoxins;superfamily_Pectin lyase-like;superfamily_Composite domain of metallo-dependent hydrolases;superfamily_E set domains;superfamily_Anthrax protective antigen	(deletion:cds_exon[110599572;110599913])	no_errors
FAM135B	51059	genome.wustl.edu	36	8	139214064	139214064	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	8	139214064	139214064	A	G	SNP	FAM135B	NM_015912	human	genbank	54_36p	-1	validated	missense	c.4175	p.F1392S	1	NULL	-	-	no_errors
SHARPIN	81858	genome.wustl.edu	36	8	145225847	145225847	+	Missense_Mutation	SNP	G	G	A		Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	8	145225847	145225847	G	A	SNP	SHARPIN	ENST00000321205	human	ensembl	54_36p	-1	known	missense	c.1082	p.P361L	0.018	NULL	-	-	no_errors
MATN2	4147	genome.wustl.edu	36	8	99023205	99023205	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	8	99023205	99023205	A	T	SNP	MATN2	NM_002380	human	genbank	54_36p	1	reviewed	missense	c.737	p.E246V	0.979	HMMPfam_EGF	HMMPfam_VWA,HMMPfam_EGF,superfamily_vWA-like,superfamily_EGF/Laminin	-	no_errors
ZFP37	7539	genome.wustl.edu	36	9	114858731	114858731	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	9	114858731	114858731	C	T	SNP	ZFP37	NM_003408	human	genbank	54_36p	-1	provisional	missense	c.59	p.R20K	0.02	NULL	HMMPfam_KRAB;HMMPfam_zf-C2H2;superfamily_KRAB domain (Kruppel-associated box Pfam 01352);superfamily_C2H2 and C2HC zinc fingers	-	no_errors
ODF2	4957	genome.wustl.edu	36	9	130296789	130296789	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	9	130296789	130296789	G	T	SNP	ODF2	NM_153437	human	genbank	54_36p	1	reviewed	silent	c.1875	p.G625	1	NULL	-	-	no_errors
KIAA1797	54914	genome.wustl.edu	36	9	20871926	20871926	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	9	20871926	20871926	G	T	SNP	KIAA1797	NM_017794	human	genbank	54_36p	1	validated	missense	c.2374	p.G792W	1	NULL	HMMPfam_HEAT;superfamily_ARM repeat	-	no_errors
KIF24	347240	genome.wustl.edu	36	9	34245784	34245784	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	9	34245784	34245784	C	T	SNP	KIF24	NM_194313	human	genbank	54_36p	-1	validated	missense	c.3821	p.C1274Y	0.9	NULL	-	-	no_errors
RANBP6	26953	genome.wustl.edu	36	9	6005291	6005291	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	9	6005291	6005291	T	C	SNP	RANBP6	NM_012416	human	genbank	54_36p	-1	validated	missense	c.317	p.K106R	1	NULL	-	-	no_errors
RORB	6096	genome.wustl.edu	36	9	76447315	76447315	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	9	76447315	76447315	A	G	SNP	RORB	NM_006914	human	genbank	54_36p	1	reviewed	missense	c.401	p.N134S	1	NULL	HMMPfam_Hormone_recep;HMMPfam_zf-C4;superfamily_Nuclear receptor ligand-binding domain;superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors
S1PR3	1903	genome.wustl.edu	36	9	90806867	90806867	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	9	90806867	90806867	G	T	SNP	S1PR3	NM_005226	human	genbank	54_36p	1	reviewed	missense	c.932	p.R311L	1	NULL	-	-	no_errors
ENSG00000187900	0	genome.wustl.edu	36	3	99440079	99440079	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	3	99440079	99440079	G	C	SNP	ENSG00000187900	ENST00000341450	human	ensembl	54_36p	1	known	missense	c.77	p.S26T	0.01	NULL	-	-	no_errors
ZCCHC18	644353	genome.wustl.edu	36	X	103245659	103245659	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	X	103245659	103245659	A	T	SNP	ZCCHC18	ENST00000299903	human	ensembl	54_36p	1	known	missense	c.201	p.Q67H	1	NULL	-	-	no_errors
FRMPD4	9758	genome.wustl.edu	36	X	12648667	12648667	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	X	12648667	12648667	T	C	SNP	FRMPD4	ENST00000304087	human	ensembl	54_36p	1	known	missense	c.4037	p.I1346T	1	NULL	superfamily_WW domain;HMMPfam_PDZ;superfamily_PDZ domain-like;superfamily_Second domain of FERM	-	no_start_codon
KLHL34	257240	genome.wustl.edu	36	X	21584090	21584090	+	Missense_Mutation	SNP	T	T	G		Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	X	21584090	21584090	T	G	SNP	KLHL34	NM_153270	human	genbank	54_36p	-1	provisional	missense	c.1738	p.K580Q	0.998	NULL	-	-	no_errors
ACOT9	23597	genome.wustl.edu	36	X	23641194	23641194	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	X	23641194	23641194	G	C	SNP	ACOT9	NM_001037171	human	genbank	54_36p	-1	validated	missense	c.641	p.A214G	1	NULL	-	-	no_errors
BCOR	54880	genome.wustl.edu	36	X	39807015	39807015	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	X	39807015	39807015	G	A	SNP	BCOR	NM_017745	human	genbank	54_36p	-1	reviewed	silent	c.3999	p.H1333	1	NULL	HMMPfam_Ank;superfamily_Ankyrin repeat	-	no_errors
LPAR4	2846	genome.wustl.edu	36	X	77897606	77897606	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	X	77897606	77897606	G	A	SNP	LPAR4	NM_005296	human	genbank	54_36p	1	reviewed	missense	c.584	p.R195H	1	NULL	-	-	no_errors
LIMS1	3987	genome.wustl.edu	36	2	108642556	108642557	+	Nonsense_Mutation	DNP	TG	TG	CT	novel	Unknown	TCGA-23-1022-01A-02W-0488-09	TCGA-23-1022-10A-01W-0488-09	TG	TG	TG	CT	TG	TG	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	160a0e7d-315e-4de3-a7d4-928412fd909c	6bd506d5-4f1a-4f51-a71f-e453196b245a	2	108642556	108642557	TG	CT	DNP	LIMS1	NM_004987	human	genbank	54_36p	1	reviewed	nonsense	c.60_61	p.EK21*	0.773:1.000	superfamily_SSF57716,HMMSmart_LIM,PatternScan_LIM_DOMAIN_1,HMMPfam_LIM	superfamily_SSF57716,HMMSmart_LIM,PatternScan_LIM_DOMAIN_1,HMMPfam_LIM	-	no_errors
