Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error
SNRPB	6628	genome.wustl.edu	36	20	2396390	2396390	+	Silent	SNP	G	G	A	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	20	2396390	2396390	G	A	SNP	SNRPB	NM_198216	human	genbank	54_36p	-1	reviewed	silent	c.18	p.S6	1.000	superfamily_Sm-like ribonucleoproteins	superfamily_Sm-like ribonucleoproteins,HMMPfam_LSM,HMMSmart_SM00651	-	no_errors
TRAP1	10131	genome.wustl.edu	36	16	3653465	3653465	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	16	3653465	3653465	C	T	SNP	TRAP1	NM_016292	human	genbank	54_36p	-1	validated	missense	c.1669	p.D557N	1.000	HMMPfam_HSP90	PatternScan_HSP90,superfamily_ATP_bd_ATPase,HMMPfam_HATPase_c,HMMSmart_HATPase_c,HMMPfam_HSP90,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_SSF110942	-	no_errors
ADCY9	115	genome.wustl.edu	36	16	3955999	3955999	+	Silent	SNP	G	G	A	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	16	3955999	3955999	G	A	SNP	ADCY9	NM_001116	human	genbank	54_36p	-1	reviewed	silent	c.3840	p.N1280	1.000	NULL	HMMSmart_SM00044,superfamily_Adenylyl and guanylyl cyclase catalytic domain,HMMPfam_Guanylate_cyc,PatternScan_GUANYLATE_CYCLASE_1	-	no_errors
PPAPDC2	403313	genome.wustl.edu	36	9	4652652	4652652	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	9	4652652	4652652	G	T	SNP	PPAPDC2	NM_203453	human	genbank	54_36p	+1	validated	missense	c.277	p.D93Y	0.999	superfamily_AcPase_VanPerase	superfamily_AcPase_VanPerase,HMMSmart_acidPPc,HMMPfam_PAP2	-	no_errors
OR52R1	119695	genome.wustl.edu	36	11	4781456	4781456	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	11	4781456	4781456	C	T	SNP	OR52R1	NM_001005177	human	genbank	54_36p	-1	validated	missense	c.968	p.R323H	0.999	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	-	no_errors
PEX5	5830	genome.wustl.edu	36	12	7252413	7252413	+	Silent	SNP	C	C	T	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	12	7252413	7252413	C	T	SNP	PEX5	NM_000319	human	genbank	54_36p	+1	reviewed	silent	c.1251	p.T417	0.996	superfamily_SSF48452	superfamily_SSF48452,HMMSmart_TPR,HMMPfam_TPR_1	-	no_errors
TP53	7157	genome.wustl.edu	36	17	7517742	7517742	+	Splice_Site	SNP	A	C	C	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	17	7517742	7517742	A	C	SNP	TP53	NM_000546	human	genbank	54_36p	-1	reviewed	splice_site	c.919+2	e7+2	1.000	-	-	-	no_errors
ADCY2	108	genome.wustl.edu	36	5	7748938	7748938	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	5	7748938	7748938	C	G	SNP	ADCY2	NM_020546	human	genbank	54_36p	+1	reviewed	missense	c.943	p.L315V	1.000	HMMSmart_CYCc,superfamily_A/G_cyclase,HMMPfam_Guanylate_cyc	HMMSmart_CYCc,superfamily_A/G_cyclase,HMMPfam_Guanylate_cyc,PatternScan_GUANYLATE_CYCLASE_1,HMMPfam_DUF1053	-	no_errors
DPPA3	359787	genome.wustl.edu	36	12	7760918	7760918	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	12	7760918	7760918	A	G	SNP	DPPA3	NM_199286	human	genbank	54_36p	+1	reviewed	missense	c.458	p.D153G	0.002	NULL	NULL	-	no_errors
GATA3	2625	genome.wustl.edu	36	10	8155835	8155835	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	10	8155835	8155835	A	T	SNP	GATA3	NM_001002295	human	genbank	54_36p	+1	validated	missense	c.1178	p.N393I	1.000	NULL	superfamily_Glucocorticoid receptor-like (DNA-binding domain),HMMSmart_SM00401,PatternScan_GATA_ZN_FINGER_1,HMMPfam_GATA	-	no_errors
CTNNBIP1	56998	genome.wustl.edu	36	1	9833405	9833405	+	Silent	SNP	C	C	T	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	1	9833405	9833405	C	T	SNP	CTNNBIP1	NM_001012329	human	genbank	54_36p	-1	reviewed	silent	c.204	p.V68	1.000	HMMPfam_ICAT,superfamily_beta-catenin-interacting protein ICAT	HMMPfam_ICAT,superfamily_beta-catenin-interacting protein ICAT	-	no_errors
MARCH6	10299	genome.wustl.edu	36	5	10468676	10468676	+	Silent	SNP	T	T	G	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	5	10468676	10468676	T	G	SNP	MARCH6	NM_005885	human	genbank	54_36p	+1	provisional	silent	c.2043	p.G681	0.978	NULL	superfamily_RING/U-box,HMMSmart_SM00744,HMMPfam_zf-C3HC4	-	no_errors
C1orf187	374946	genome.wustl.edu	36	1	11694610	11694610	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	1	11694610	11694610	G	T	SNP	C1orf187	NM_198545	human	genbank	54_36p	+1	validated	splice_site	c.757+1	e3+1	1.000	-	-	-	no_errors
MFN2	9927	genome.wustl.edu	36	1	11989701	11989701	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	1	11989701	11989701	G	T	SNP	MFN2	NM_014874	human	genbank	54_36p	+1	reviewed	missense	c.1877	p.W626L	1.000	HMMPfam_Fzo_mitofusin	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Dynamin_N,HMMPfam_Fzo_mitofusin	-	no_errors
HIVEP1	3096	genome.wustl.edu	36	6	12228818	12228818	+	Silent	SNP	T	T	C	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	6	12228818	12228818	T	C	SNP	HIVEP1	NM_002114	human	genbank	54_36p	+1	validated	silent	c.804	p.A268	0.000	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
EPS8	2059	genome.wustl.edu	36	12	15702281	15702281	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	12	15702281	15702281	A	T	SNP	EPS8	NM_004447	human	genbank	54_36p	-1	reviewed	missense	c.1100	p.M367K	1.000	NULL	HMMSmart_PTB,superfamily_SSF50729,HMMPfam_PTB,superfamily_SH3,HMMPfam_SH3_1,HMMSmart_SH3	-	no_errors
OR10H1	26539	genome.wustl.edu	36	19	15779749	15779749	+	Silent	SNP	C	C	A	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	19	15779749	15779749	C	A	SNP	OR10H1	NM_013940	human	genbank	54_36p	-1	validated	silent	c.99	p.L33	0.635	superfamily_SSF81321	PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321,HMMPfam_7tm_1	-	no_errors
NPC1	4864	genome.wustl.edu	36	18	19375117	19375117	+	Silent	SNP	G	G	A	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	18	19375117	19375117	G	A	SNP	NPC1	NM_000271	human	genbank	54_36p	-1	validated	silent	c.2427	p.S809	0.000	HMMPfam_Patched	HMMPfam_Patched,superfamily_SSF82866	-	no_errors
OR4K14	122740	genome.wustl.edu	36	14	19552902	19552902	+	Silent	SNP	T	T	C	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	14	19552902	19552902	T	C	SNP	OR4K14	NM_001004712	human	genbank	54_36p	-1	provisional	silent	c.291	p.G97	0.912	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
OR4M2	390538	genome.wustl.edu	36	15	19870783	19870783	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	15	19870783	19870783	C	T	SNP	OR4M2	NM_001004719	human	genbank	54_36p	+1	provisional	missense	c.844	p.P282S	0.167	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	-	no_errors
PLXDC2	84898	genome.wustl.edu	36	10	20574386	20574386	+	Silent	SNP	G	G	C	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	10	20574386	20574386	G	C	SNP	PLXDC2	NM_032812	human	genbank	54_36p	+1	provisional	silent	c.1419	p.V473	1.000	NULL	HMMPfam_PSI,HMMSmart_SM00423	-	no_errors
ADAM7	8756	genome.wustl.edu	36	8	24400701	24400701	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	8	24400701	24400701	G	A	SNP	ADAM7	NM_003817	human	genbank	54_36p	+1	validated	missense	c.1072	p.V358M	1.000	"superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Reprolysin"	"HMMPfam_Pep_M12B_propep,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Reprolysin,HMMPfam_Disintegrin,HMMSmart_SM00050,superfamily_Blood coagulation inhibitor (disintegrin),PatternScan_DISINTEGRIN_1,HMMSmart_SM00608,HMMPfam_ADAM_CR"	-	no_errors
KCNA4	3739	genome.wustl.edu	36	11	29990389	29990389	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	11	29990389	29990389	C	T	SNP	KCNA4	NM_002233	human	genbank	54_36p	-1	reviewed	missense	c.413	p.G138E	0.688	NULL	HMMPfam_K_channel_TID,superfamily_POZ domain,HMMSmart_SM00225,HMMPfam_K_tetra,superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	-	no_errors
CCDC129	223075	genome.wustl.edu	36	7	31560639	31560639	+	Silent	SNP	G	G	A	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	7	31560639	31560639	G	A	SNP	CCDC129	NM_194300	human	genbank	54_36p	+1	validated	silent	c.189	p.Q63	1.000	NULL	PatternScan_PA2_HIS	-	no_errors
YARS2	51067	genome.wustl.edu	36	12	32799342	32799342	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	12	32799342	32799342	G	C	SNP	YARS2	NM_001040436	human	genbank	54_36p	-1	validated	missense	c.734	p.S245C	0.987	superfamily_SSF52374,HMMPfam_tRNA-synt_1b	superfamily_SSF52374,HMMPfam_tRNA-synt_1b,PatternScan_AA_TRNA_LIGASE_I,superfamily_SSF55174	-	no_errors
RPS10	6204	genome.wustl.edu	36	6	34500977	34500977	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	6	34500977	34500977	C	A	SNP	RPS10	NM_001014	human	genbank	54_36p	-1	reviewed	splice_site	c.1-1	e1-1	1.000	-	-	-	no_errors
NUP155	9631	genome.wustl.edu	36	5	37338718	37338718	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	5	37338718	37338718	G	C	SNP	NUP155	NM_153485	human	genbank	54_36p	-1	reviewed	missense	c.3367	p.L1123V	1.000	HMMPfam_Nucleoporin	HMMPfam_Nucleoporin	-	no_errors
NAGLU	4669	genome.wustl.edu	36	17	37946717	37946717	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	17	37946717	37946717	G	A	SNP	NAGLU	NM_000263	human	genbank	54_36p	+1	reviewed	missense	c.988	p.A330T	0.816	HMMPfam_NAGLU	HMMPfam_NAGLU	-	no_errors
CHST14	113189	genome.wustl.edu	36	15	38551395	38551395	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	15	38551395	38551395	C	G	SNP	CHST14	NM_130468	human	genbank	54_36p	+1	provisional	missense	c.691	p.R231G	1.000	HMMPfam_Sulfotransfer_2	HMMPfam_Sulfotransfer_2	-	no_errors
MAG	27307	genome.wustl.edu	36	19	40492791	40492791	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	19	40492791	40492791	T	C	SNP	MAG	NM_002361	human	genbank	54_36p	+1	reviewed	missense	c.1406	p.V469A	0.888	superfamily_SSF48726	HMMPfam_V-set,superfamily_SSF48726,HMMSmart_IG,HMMPfam_C2-set_2,HMMPfam_I-set,HMMSmart_IGc2,HMMPfam_ig	-	no_errors
EPB42	2038	genome.wustl.edu	36	15	41294790	41294790	+	Silent	SNP	G	G	T	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	15	41294790	41294790	G	T	SNP	EPB42	NM_000119	human	genbank	54_36p	-1	reviewed	silent	c.315	p.T105	1.000	superfamily_Ig_E-set,HMMPfam_Transglut_N	superfamily_Ig_E-set,HMMPfam_Transglut_N,superfamily_SSF54001,HMMSmart_TGc,PatternScan_TRANSGLUTAMINASES,HMMPfam_Transglut_core,superfamily_Transglut_C,HMMPfam_Transglut_C	-	no_errors
JPH2	57158	genome.wustl.edu	36	20	42178001	42178001	+	Silent	SNP	G	C	C	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	20	42178001	42178001	G	C	SNP	JPH2	NM_020433	human	genbank	54_36p	-1	reviewed	silent	c.1728	p.P576	0.028	NULL	superfamily_Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain,HMMSmart_SM00698,HMMPfam_MORN,PatternScan_SUGAR_TRANSPORT_1,PatternScan_XYLOSE_ISOMERASE_1	-	no_errors
KRT18P26	729634	genome.wustl.edu	36	2	44366600	44366600	+	RNA	SNP	C	C	T	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	2	44366600	44366600	C	T	SNP	KRT18P26	XR_039730	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.000	-	-	-	pseudogene
NPC1L1	29881	genome.wustl.edu	36	7	44545031	44545031	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	7	44545031	44545031	T	C	SNP	NPC1L1	NM_013389	human	genbank	54_36p	-1	validated	missense	c.1490	p.N497S	1.000	HMMPfam_Patched	HMMPfam_Patched,superfamily_SSF82866	-	no_errors
WDR13	64743	genome.wustl.edu	36	X	48342063	48342063	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	X	48342063	48342063	G	A	SNP	WDR13	NM_017883	human	genbank	54_36p	+1	reviewed	missense	c.56	p.R19H	1.000	NULL	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40	-	no_errors
uc002rwn.1	0	genome.wustl.edu	36	2	48610609	48610609	+	Silent	SNP	A	G	G	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	2	48610609	48610609	A	G	SNP	uc002rwn.1	ENST00000378305	human	ensembl	54_36p	+1	known	silent	c.108	p.P36	0.084	NULL	NULL	-	no_errors
WDR6	11180	genome.wustl.edu	36	3	49027725	49027725	+	Nonstop_Mutation	SNP	A	A	C	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	3	49027725	49027725	A	C	SNP	WDR6	NM_018031	human	genbank	54_36p	+1	reviewed	nonstop	c.3366	p.*1122C	0.300	NULL	superfamily_WD40_like,HMMSmart_WD40,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors
ZNF224	7767	genome.wustl.edu	36	19	49302961	49302961	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	19	49302961	49302961	A	C	SNP	ZNF224	NM_013398	human	genbank	54_36p	+1	provisional	missense	c.808	p.I270L	0.063	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
FBXO46	23403	genome.wustl.edu	36	19	50908020	50908020	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	19	50908020	50908020	G	C	SNP	FBXO46	NM_001080469	human	genbank	54_36p	-1	provisional	missense	c.574	p.R192G	0.000	NULL	superfamily_F-box domain,HMMPfam_F-box,HMMSmart_SM00256	-	no_errors
TRPM4	54795	genome.wustl.edu	36	19	54366797	54366797	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	19	54366797	54366797	C	T	SNP	TRPM4	NM_017636	human	genbank	54_36p	+1	provisional	missense	c.1009	p.R337C	0.284	NULL	HMMPfam_Ion_trans	-	no_errors
SLC17A7	57030	genome.wustl.edu	36	19	54626211	54626211	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	19	54626211	54626211	C	A	SNP	SLC17A7	NM_020309	human	genbank	54_36p	-1	reviewed	missense	c.1262	p.G421V	1.000	superfamily_MFS_gen_substrate_transporter,HMMPfam_MFS_1	superfamily_MFS_gen_substrate_transporter,HMMPfam_MFS_1	-	no_errors
BCAS3	54828	genome.wustl.edu	36	17	56447917	56447917	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	17	56447917	56447917	T	C	SNP	BCAS3	NM_001099432	human	genbank	54_36p	+1	validated	missense	c.1510	p.Y504H	1.000	NULL	superfamily_WD40 repeat-like	-	no_errors
FTSJ3	117246	genome.wustl.edu	36	17	59257971	59257971	+	Silent	SNP	G	C	C	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	17	59257971	59257971	G	C	SNP	FTSJ3	NM_017647	human	genbank	54_36p	-1	reviewed	silent	c.24	p.G8	1.000	NULL	superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_FtsJ,HMMPfam_Spb1_C	-	no_errors
CDH4	1002	genome.wustl.edu	36	20	59932901	59932901	+	Silent	SNP	C	C	T	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	20	59932901	59932901	C	T	SNP	CDH4	NM_001794	human	genbank	54_36p	+1	reviewed	silent	c.1743	p.Y581	0.998	superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA	superfamily_Cadherin,HMMPfam_Cadherin_pro,HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin_C	-	no_errors
POLA2	23649	genome.wustl.edu	36	11	64792738	64792738	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	11	64792738	64792738	G	T	SNP	POLA2	NM_002689	human	genbank	54_36p	+1	provisional	nonsense	c.316	p.E106*	1.000	HMMPfam_Pol_alpha_B_N	HMMPfam_Pol_alpha_B_N,HMMPfam_DNA_pol_E_B	-	no_errors
ACTN3	89	genome.wustl.edu	36	11	66087235	66087235	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	11	66087235	66087235	C	A	SNP	ACTN3	NM_001104	human	genbank	54_36p	+1	reviewed	missense	c.2701	p.L901I	1.000	NULL	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_SM00033,PatternScan_ACTININ_2,superfamily_Spectrin repeat,HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_EF-hand,HMMSmart_SM00054,HMMPfam_efhand_Ca_insen,PatternScan_DEHYDRATASE_SER_THR	-	pseudogene
STARD8	9754	genome.wustl.edu	36	X	67858172	67858172	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	X	67858172	67858172	A	T	SNP	STARD8	NM_014725	human	genbank	54_36p	+1	validated	missense	c.2078	p.E693V	1.000	superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP	superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP,superfamily_Bet v1-like,HMMPfam_START,HMMSmart_SM00234	-	no_errors
EFNB1	1947	genome.wustl.edu	36	X	67976292	67976292	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	X	67976292	67976292	G	A	SNP	EFNB1	NM_004429	human	genbank	54_36p	+1	reviewed	missense	c.467	p.R156H	0.991	HMMPfam_Ephrin,superfamily_Cupredoxin	HMMPfam_Ephrin,superfamily_Cupredoxin,PatternScan_EPHRIN	-	no_errors
PHKA1	5255	genome.wustl.edu	36	X	71763559	71763559	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	X	71763559	71763559	A	T	SNP	PHKA1	NM_002637	human	genbank	54_36p	-1	validated	missense	c.1780	p.F594I	1.000	HMMPfam_PHK_AB	HMMPfam_PHK_AB,superfamily_Six-hairpin glycosidases	-	no_errors
ALMS1	7840	genome.wustl.edu	36	2	73529695	73529695	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	2	73529695	73529695	G	A	SNP	ALMS1	NM_015120	human	genbank	54_36p	+1	reviewed	missense	c.2530	p.D844N	0.060	NULL	NULL	-	no_errors
MYOZ1	58529	genome.wustl.edu	36	10	75064314	75064314	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	10	75064314	75064314	C	A	SNP	MYOZ1	NM_021245	human	genbank	54_36p	-1	provisional	missense	c.436	p.G146C	0.997	HMMPfam_Calsarcin	HMMPfam_Calsarcin	-	no_errors
VCL	7414	genome.wustl.edu	36	10	75533626	75533626	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	10	75533626	75533626	C	G	SNP	VCL	NM_014000	human	genbank	54_36p	+1	reviewed	missense	c.2065	p.Q689E	1.000	HMMPfam_Vinculin,superfamily_alpha-catenin/vinculin	superfamily_alpha-catenin/vinculin,HMMPfam_Vinculin,PatternScan_VINCULIN_1,PatternScan_VINCULIN_2	-	no_errors
BAHCC1	57597	genome.wustl.edu	36	17	77040472	77040472	+	Silent	SNP	C	T	T	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	17	77040472	77040472	C	T	SNP	BAHCC1	NM_001080519	human	genbank	54_36p	+1	inferred	silent	c.5853	p.F1951	0.994	NULL	HMMPfam_BAH,HMMSmart_SM00439	-	no_errors
RSBN1L	222194	genome.wustl.edu	36	7	77246375	77246375	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	7	77246375	77246375	C	T	SNP	RSBN1L	NM_198467	human	genbank	54_36p	+1	validated	missense	c.2495	p.S832L	0.998	NULL	NULL	-	no_errors
COPS4	51138	genome.wustl.edu	36	4	84190155	84190155	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	4	84190155	84190155	G	A	SNP	COPS4	NM_016129	human	genbank	54_36p	+1	reviewed	missense	c.404	p.G135E	1.000	NULL	"HMMPfam_PCI,superfamily_""Winged helix"" DNA-binding domain,HMMSmart_SM00088"	-	no_errors
PTPN13	5783	genome.wustl.edu	36	4	87914563	87914563	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	4	87914563	87914563	T	A	SNP	PTPN13	NM_080685	human	genbank	54_36p	+1	reviewed	missense	c.5378	p.L1793H	1.000	superfamily_PDZ,HMMPfam_PDZ	HMMSmart_KIND,superfamily_SSF101690,HMMSmart_B41,superfamily_SSF54236,HMMPfam_FERM_N,superfamily_FERM_3-hlx,HMMPfam_FERM_M,superfamily_SSF50729,HMMPfam_FERM_C,superfamily_PDZ,HMMPfam_PDZ,HMMSmart_PDZ,superfamily_SSF52799,HMMSmart_PTPc,HMMPfam_Y_phosphatase	-	no_errors
MGC26647	219557	genome.wustl.edu	36	7	88262178	88262178	+	Silent	SNP	G	G	A	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	7	88262178	88262178	G	A	SNP	MGC26647	NM_152706	human	genbank	54_36p	-1	predicted	silent	c.15	p.V5	0.003	NULL	NULL	-	no_errors
ENSG00000211624	0	genome.wustl.edu	36	2	89681530	89681530	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	2	89681530	89681530	T	C	SNP	ENSG00000211624	ENST00000390269	human	ensembl	54_36p	+1	known	missense	c.146	p.L49P	0.145	HMMPfam_V-set,superfamily_SSF48726,HMMSmart_IGv	HMMPfam_V-set,superfamily_SSF48726,HMMSmart_IGv	-	no_stop_codon:bad_bp_length_for_coding_region
ENSG00000211624	0	genome.wustl.edu	36	2	89681685	89681685	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	2	89681685	89681685	A	T	SNP	ENSG00000211624	ENST00000390269	human	ensembl	54_36p	+1	known	missense	c.301	p.S101C	1.000	HMMSmart_IGv,HMMPfam_V-set,superfamily_SSF48726	HMMSmart_IGv,HMMPfam_V-set,superfamily_SSF48726	-	no_stop_codon:bad_bp_length_for_coding_region
KCNK13	56659	genome.wustl.edu	36	14	89720341	89720341	+	Silent	SNP	C	C	T	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	14	89720341	89720341	C	T	SNP	KCNK13	NM_022054	human	genbank	54_36p	+1	reviewed	silent	c.468	p.I156	0.971	superfamily_Voltage-gated potassium channels	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans_2	-	no_errors
FAT3	120114	genome.wustl.edu	36	11	92173495	92173495	+	Silent	SNP	A	A	G	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	11	92173495	92173495	A	G	SNP	FAT3	NM_001008781	human	genbank	54_36p	+1	validated	silent	c.7668	p.E2556	1.000	superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Concanavalin A-like lectins/glucanases,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMSmart_SM00282,HMMPfam_Laminin_G_2,HMMSmart_SM00179,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_CA,PatternScan_ASX_HYDROXYL,PatternScan_EGF_2	-	no_errors
CNN3	1266	genome.wustl.edu	36	1	95135898	95135898	+	Silent	SNP	G	G	A	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	1	95135898	95135898	G	A	SNP	CNN3	NM_001839	human	genbank	54_36p	-1	validated	silent	c.978	p.G326	1.000	NULL	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,HMMSmart_SM00033,PatternScan_CALPONIN_1,HMMPfam_Calponin	-	no_errors
C8orf47	203111	genome.wustl.edu	36	8	99170483	99170483	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	8	99170483	99170483	C	A	SNP	C8orf47	NM_173549	human	genbank	54_36p	+1	predicted	missense	c.62	p.T21N	0.965	NULL	NULL	-	no_errors
KIAA1529	57653	genome.wustl.edu	36	9	99173809	99173809	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	9	99173809	99173809	A	G	SNP	KIAA1529	NM_020893	human	genbank	54_36p	+1	predicted	missense	c.4567	p.R1523G	0.978	NULL	NULL	-	no_errors
POP1	10940	genome.wustl.edu	36	8	99230401	99230401	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	8	99230401	99230401	G	T	SNP	POP1	NM_015029	human	genbank	54_36p	+1	reviewed	missense	c.1893	p.W631C	1.000	HMMPfam_POPLD	HMMPfam_POP1,HMMPfam_POPLD	-	no_errors
C9orf125	84302	genome.wustl.edu	36	9	103278972	103278972	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	9	103278972	103278972	G	A	SNP	C9orf125	NM_032342	human	genbank	54_36p	-1	predicted	missense	c.224	p.A75V	0.896	NULL	NULL	-	no_errors
ENSG00000211969	0	genome.wustl.edu	36	14	106154357	106154357	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	14	106154357	106154357	A	G	SNP	ENSG00000211969	ENST00000390629	human	ensembl	54_36p	-1	known	missense	c.292	p.S98P	0.000	HMMPfam_V-set,superfamily_SSF48726,HMMSmart_IGv	HMMPfam_V-set,superfamily_SSF48726,HMMSmart_IGv	-	no_stop_codon:bad_bp_length_for_coding_region
GUCY1A2	2977	genome.wustl.edu	36	11	106316092	106316092	+	Silent	SNP	T	T	C	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	11	106316092	106316092	T	C	SNP	GUCY1A2	NM_000855	human	genbank	54_36p	-1	validated	silent	c.510	p.Q170	1.000	HMMPfam_HNOB,superfamily_H-NOX domain	HMMPfam_HNOB,superfamily_H-NOX domain,HMMPfam_HNOBA,HMMSmart_SM00044,superfamily_Adenylyl and guanylyl cyclase catalytic domain,HMMPfam_Guanylate_cyc,PatternScan_GUANYLATE_CYCLASE_1	-	no_errors
ARHGAP20	57569	genome.wustl.edu	36	11	109955366	109955366	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	11	109955366	109955366	G	T	SNP	ARHGAP20	NM_020809	human	genbank	54_36p	-1	validated	missense	c.3514	p.P1172T	0.911	NULL	superfamily_PH domain-like,HMMSmart_SM00233,HMMPfam_RA,superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP	-	no_errors
SIDT1	54847	genome.wustl.edu	36	3	114803154	114803154	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	3	114803154	114803154	A	G	SNP	SIDT1	NM_017699	human	genbank	54_36p	+1	validated	missense	c.1075	p.I359V	1.000	NULL	NULL	-	no_errors
ARSJ	79642	genome.wustl.edu	36	4	115044247	115044247	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	4	115044247	115044247	G	C	SNP	ARSJ	NM_024590	human	genbank	54_36p	-1	validated	missense	c.432	p.I144M	1.000	HMMPfam_Sulfatase,superfamily_Alkaline phosphatase-like	HMMPfam_Sulfatase,superfamily_Alkaline phosphatase-like,PatternScan_SULFATASE_1,PatternScan_SULFATASE_2	-	no_errors
ENSG00000198230	0	genome.wustl.edu	36	11	117404815	117404815	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	11	117404815	117404815	G	A	SNP	ENSG00000198230	ENST00000356822	human	ensembl	54_36p	-1	known	missense	c.301	p.L101F	0.488	NULL	NULL	-	no_errors
MLL	4297	genome.wustl.edu	36	11	117847610	117847610	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	11	117847610	117847610	C	A	SNP	MLL	NM_005933	human	genbank	54_36p	+1	validated	missense	c.526	p.R176S	1.000	PatternScan_HMGI_Y	PatternScan_HMGI_Y,HMMPfam_AT_hook,HMMPfam_zf-CXXC,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1,PatternScan_RECR,HMMSmart_SM00297,superfamily_Bromodomain,HMMPfam_FYRN,HMMSmart_SM00541,PatternScan_EF_HAND_1,HMMPfam_FYRC,HMMSmart_SM00542,superfamily_SET domain,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00508	-	no_errors
GFRA1	2674	genome.wustl.edu	36	10	117874791	117874791	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	10	117874791	117874791	G	C	SNP	GFRA1	NM_005264	human	genbank	54_36p	-1	reviewed	missense	c.701	p.S234C	1.000	NULL	superfamily_GDNF receptor-like (Pfam 02351),HMMPfam_GDNF	-	no_errors
GFRA1	2674	genome.wustl.edu	36	10	117875045	117875045	+	Silent	SNP	G	G	C	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	10	117875045	117875045	G	C	SNP	GFRA1	NM_005264	human	genbank	54_36p	-1	reviewed	silent	c.447	p.P149	0.993	NULL	HMMPfam_GDNF,superfamily_GDNF receptor-like (Pfam 02351)	-	no_errors
KNTC1	9735	genome.wustl.edu	36	12	121580602	121580602	+	Silent	SNP	C	C	T	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	12	121580602	121580602	C	T	SNP	KNTC1	NM_014708	human	genbank	54_36p	+1	reviewed	silent	c.39	p.T13	0.996	NULL	HMMPfam_Rod_C,PatternScan_BZIP_BASIC	-	no_errors
PRDM5	11107	genome.wustl.edu	36	4	121994094	121994094	+	Silent	SNP	G	G	T	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	4	121994094	121994094	G	T	SNP	PRDM5	NM_018699	human	genbank	54_36p	-1	reviewed	silent	c.229	p.R77	1.000	HMMPfam_SET,HMMSmart_SM00317	HMMPfam_SET,HMMSmart_SM00317,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
OR1J1	347168	genome.wustl.edu	36	9	124279318	124279318	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	9	124279318	124279318	C	G	SNP	OR1J1	NM_001004451	human	genbank	54_36p	-1	provisional	missense	c.709	p.A237P	1.000	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
CUZD1	50624	genome.wustl.edu	36	10	124590773	124590773	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	10	124590773	124590773	C	T	SNP	CUZD1	NM_022034	human	genbank	54_36p	-1	provisional	missense	c.144	p.M48I	0.286	superfamily_Spermadhesin CUB domain,HMMSmart_SM00042	superfamily_Spermadhesin CUB domain,HMMSmart_SM00042,HMMPfam_CUB,HMMPfam_Zona_pellucida,HMMSmart_SM00241	-	no_errors
ROPN1	54763	genome.wustl.edu	36	3	125177008	125177008	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	3	125177008	125177008	C	G	SNP	ROPN1	NM_017578	human	genbank	54_36p	-1	provisional	missense	c.304	p.D102H	1.000	NULL	superfamily_Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit,HMMPfam_RIIa	-	no_errors
RPUSD4	84881	genome.wustl.edu	36	11	125578560	125578560	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	11	125578560	125578560	T	A	SNP	RPUSD4	NM_032795	human	genbank	54_36p	-1	validated	missense	c.1097	p.N366I	0.000	superfamily_PsdUridine_synth_cat_dom	superfamily_PsdUridine_synth_cat_dom,HMMPfam_PseudoU_synth_2,PatternScan_PSI_RLU	-	no_errors
C9orf126	286205	genome.wustl.edu	36	9	126831796	126831796	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	9	126831796	126831796	C	T	SNP	C9orf126	NM_173690	human	genbank	54_36p	-1	validated	missense	c.343	p.G115R	1.000	NULL	NULL	-	no_errors
SMARCA1	6594	genome.wustl.edu	36	X	128430549	128430549	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	X	128430549	128430549	C	G	SNP	SMARCA1	NM_003069	human	genbank	54_36p	-1	reviewed	missense	c.2580	p.W860C	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00717,superfamily_Homeodomain-like	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_SNF2_N,HMMSmart_SM00490,HMMPfam_Helicase_C,HMMPfam_HAND,superfamily_HAND domain of the nucleosome remodeling ATPase ISWI,HMMSmart_SM00717,superfamily_Homeodomain-like,HMMPfam_SLIDE	-	no_errors
PLAC1	10761	genome.wustl.edu	36	X	133528098	133528098	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	X	133528098	133528098	T	A	SNP	PLAC1	NM_021796	human	genbank	54_36p	-1	provisional	missense	c.281	p.Y94F	0.138	NULL	NULL	-	no_errors
ENSG00000159247	0	genome.wustl.edu	36	9	140191156	140191156	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	9	140191156	140191156	G	T	SNP	ENSG00000159247	ENST00000290377	human	ensembl	54_36p	+1	known	missense	c.954	p.Q318H	0.995	superfamily_Tubulin C-terminal domain-like,HMMPfam_Tubulin_C	superfamily_Tubulin nucleotide-binding domain-like,HMMPfam_Tubulin,PatternScan_TUBULIN,superfamily_Tubulin C-terminal domain-like,HMMPfam_Tubulin_C	-	no_start_codon
PCDHB7	56129	genome.wustl.edu	36	5	140532628	140532628	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	5	140532628	140532628	C	A	SNP	PCDHB7	NM_018940	human	genbank	54_36p	+1	reviewed	missense	c.28	p.Q10K	0.009	NULL	HMMPfam_Cadherin_2,superfamily_Cadherin-like,PatternScan_CADHERIN_1,HMMPfam_Cadherin,HMMSmart_SM00112	-	no_errors
PCDHB13	56123	genome.wustl.edu	36	5	140575467	140575467	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	5	140575467	140575467	C	T	SNP	PCDHB13	NM_018933	human	genbank	54_36p	+1	reviewed	missense	c.1588	p.R530C	0.000	superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA	HMMPfam_Cadherin_2,superfamily_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors
MAGEC1	9947	genome.wustl.edu	36	X	140821692	140821692	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	X	140821692	140821692	C	A	SNP	MAGEC1	NM_005462	human	genbank	54_36p	+1	reviewed	missense	c.836	p.T279N	0.001	NULL	HMMPfam_MAGE	-	no_errors
LRP1B	53353	genome.wustl.edu	36	2	140931595	140931595	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	2	140931595	140931595	G	C	SNP	LRP1B	NM_018557	human	genbank	54_36p	-1	validated	missense	c.9721	p.H3241D	1.000	superfamily_SSF63825,HMMSmart_LY,HMMPfam_Ldl_recept_b	superfamily_LDL_rcpt_classA_cys-rich,HMMPfam_Ldl_recept_a,HMMSmart_LDLa,PatternScan_LDLRA_1,superfamily_SSF57196,HMMSmart_EGF,PatternScan_EGF_2,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_EGF_CA,PatternScan_ASX_HYDROXYL,superfamily_SSF63825,HMMSmart_LY,HMMPfam_Ldl_recept_b,HMMPfam_EGF,HMMPfam_NHL,HMMPfam_EGF_2,PatternScan_EGF_1	-	no_errors
FBXO38	81545	genome.wustl.edu	36	5	147787093	147787093	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	5	147787093	147787093	C	G	SNP	FBXO38	NM_205836	human	genbank	54_36p	+1	validated	missense	c.2043	p.I681M	1.000	NULL	superfamily_F-box domain,HMMPfam_F-box,superfamily_RNI-like	-	no_errors
ZNF282	8427	genome.wustl.edu	36	7	148526375	148526375	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	7	148526375	148526375	G	A	SNP	ZNF282	NM_003575	human	genbank	54_36p	+1	validated	missense	c.183	p.M61I	0.988	NULL	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
MBD5	55777	genome.wustl.edu	36	2	148963609	148963609	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	2	148963609	148963609	C	T	SNP	MBD5	NM_018328	human	genbank	54_36p	+1	validated	missense	c.3239	p.P1080L	0.910	NULL	HMMSmart_SM00391,HMMPfam_MBD,superfamily_Tudor/PWWP/MBT,HMMPfam_PWWP	-	no_errors
LCE2B	26239	genome.wustl.edu	36	1	150926230	150926230	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	1	150926230	150926230	C	A	SNP	LCE2B	NM_014357	human	genbank	54_36p	+1	reviewed	missense	c.287	p.P96H	0.000	NULL	NULL	-	no_errors
AKAP12	9590	genome.wustl.edu	36	6	151711564	151711564	+	Silent	SNP	G	G	C	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	6	151711564	151711564	G	C	SNP	AKAP12	NM_005100	human	genbank	54_36p	+1	reviewed	silent	c.345	p.V115	0.976	NULL	HMMPfam_WSK,HMMPfam_RII_binding_1	-	no_errors
FUNDC2	65991	genome.wustl.edu	36	X	153936114	153936114	+	Silent	SNP	A	A	G	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	X	153936114	153936114	A	G	SNP	FUNDC2	NM_023934	human	genbank	54_36p	+1	validated	silent	c.543	p.G181	1.000	HMMPfam_FUN14	HMMPfam_FUN14	-	no_errors
ODZ2	57451	genome.wustl.edu	36	5	167564074	167564074	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	5	167564074	167564074	G	C	SNP	ODZ2	ENST00000388903	human	ensembl	54_36p	+1	known	missense	c.3694	p.A1232P	1.000	superfamily_Concanavalin A-like lectins/glucanases,superfamily_NHL repeat	HMMPfam_Ten_N,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF_2,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Carboxypeptidase regulatory domain,superfamily_NHL repeat,HMMPfam_NHL,HMMPfam_RHS_repeat	-	no_errors
MYOC	4653	genome.wustl.edu	36	1	169871796	169871796	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	1	169871796	169871796	G	C	SNP	MYOC	NM_000261	human	genbank	54_36p	-1	reviewed	missense	c.1407	p.N469K	0.996	HMMPfam_OLF,HMMSmart_SM00284	HMMPfam_OLF,HMMSmart_SM00284	-	no_errors
RBM45	129831	genome.wustl.edu	36	2	178685547	178685547	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	2	178685547	178685547	G	C	SNP	RBM45	NM_152945	human	genbank	54_36p	+1	provisional	missense	c.28	p.G10R	0.990	NULL	HMMSmart_SM00360,HMMPfam_RRM_1,superfamily_RNA-binding domain RBD	-	no_errors
CALCRL	10203	genome.wustl.edu	36	2	187919235	187919235	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	2	187919235	187919235	C	G	SNP	CALCRL	NM_005795	human	genbank	54_36p	-1	validated	missense	c.1307	p.C436S	0.534	NULL	superfamily_SSF111418,HMMSmart_HormR,HMMPfam_HRM,PatternScan_G_PROTEIN_RECEP_F2_1,HMMPfam_7tm_2,PatternScan_G_PROTEIN_RECEP_F2_2	-	no_errors
PMS1	5378	genome.wustl.edu	36	2	190437106	190437106	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	2	190437106	190437106	A	G	SNP	PMS1	NM_000534	human	genbank	54_36p	+1	reviewed	missense	c.2249	p.Y750C	1.000	NULL	superfamily_ATP_bd_ATPase,HMMPfam_HATPase_c,HMMSmart_HATPase_c,PatternScan_DNA_MISMATCH_REPAIR_1,superfamily_Ribosomal_S5_D2-typ_fold,HMMPfam_DNA_mis_repair,superfamily_HMG-box,HMMSmart_HMG,HMMPfam_HMG_box	-	no_errors
F13B	2165	genome.wustl.edu	36	1	195276458	195276458	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	1	195276458	195276458	T	C	SNP	F13B	NM_001994	human	genbank	54_36p	-1	reviewed	missense	c.1769	p.E590G	0.753	superfamily_Complement_control_module	superfamily_Complement_control_module,HMMPfam_Sushi,HMMSmart_CCP	-	no_errors
REN	5972	genome.wustl.edu	36	1	202396352	202396352	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	1	202396352	202396352	T	C	SNP	REN	NM_000537	human	genbank	54_36p	-1	reviewed	missense	c.451	p.T151A	0.870	superfamily_Acid proteases,HMMPfam_Asp	superfamily_Acid proteases,HMMPfam_A1_Propeptide,HMMPfam_Asp,PatternScan_ASP_PROTEASE	-	no_errors
GPR1	2825	genome.wustl.edu	36	2	206749327	206749327	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	2	206749327	206749327	C	T	SNP	GPR1	NM_001098199	human	genbank	54_36p	-1	validated	missense	c.890	p.S297N	1.000	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	-	no_errors
C2orf21	285175	genome.wustl.edu	36	2	210350488	210350488	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	2	210350488	210350488	T	A	SNP	C2orf21	NM_182587	human	genbank	54_36p	+1	validated	missense	c.560	p.L187H	1.000	NULL	NULL	-	no_errors
RYR2	6262	genome.wustl.edu	36	1	235618091	235618091	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	1	235618091	235618091	G	T	SNP	RYR2	NM_001035	human	genbank	54_36p	+1	reviewed	missense	c.758	p.G253V	0.989	HMMSmart_SM00472,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815)	HMMPfam_Ins145_P3_rec,HMMSmart_SM00472,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMPfam_RYDR_ITPR,HMMPfam_SPRY,HMMSmart_SM00449,HMMPfam_RyR,HMMPfam_RIH_assoc,superfamily_EF-hand,HMMPfam_RR_TM4-6,HMMPfam_Ion_trans	-	no_errors
OR2T11	127077	genome.wustl.edu	36	1	246856593	246856593	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	1	246856593	246856593	A	T	SNP	OR2T11	NM_001001964	human	genbank	54_36p	-1	provisional	missense	c.460	p.F154I	0.003	superfamily_SSF81321,HMMPfam_7tm_1	PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321,HMMPfam_7tm_1	-	no_errors
PYGB	5834	genome.wustl.edu	36	20	25225071	25225071	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	20	25225071	25225071	C	-	DEL	PYGB	NM_002862	human	genbank	54_36p	+1	reviewed	frame_shift_del	c.2445	p.R816fs	1.000	superfamily_SSF53756,HMMPfam_Phosphorylase	superfamily_SSF53756,HMMPfam_Phosphorylase,PatternScan_PHOSPHORYLASE	(deletion:cds_exon[25225006,25225158])	no_errors
FAM186B	84070	genome.wustl.edu	36	12	48280347	48280347	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	12	48280347	48280347	A	-	DEL	FAM186B	NM_032130	human	genbank	54_36p	-1	predicted	frame_shift_del	c.1343	p.F448fs	0.001	NULL	NULL	(deletion:cds_exon[48279519,48281184])	no_errors
ABCA13	154664	genome.wustl.edu	36	7	48327316	48327339	+	In_Frame_Del	DEL	GCTTTATCAGGAAATTCTACAATT	GCTTTATCAGGAAATTCTACAATT	-	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	GCTTTATCAGGAAATTCTACAATT	GCTTTATCAGGAAATTCTACAATT					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	7	48327316	48327339	GCTTTATCAGGAAATTCTACAATT	-	DEL	ABCA13	NM_152701	human	genbank	54_36p	+1	reviewed	in_frame_del	c.9713_9736	p.FIRKFYNC3239in_frame_del	1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.998:0.999:1.000:0.997:1.000:1.000:1.000:1.000:0.994	NULL	PatternScan_SERPIN	(deletion:cds_exon[48327300,48327439])	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
TXNDC16	57544	genome.wustl.edu	36	14	52024901	52024902	+	Frame_Shift_Del	DEL	AT	AT	-	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	AT	AT					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	14	52024901	52024902	AT	-	DEL	TXNDC16	NM_020784	human	genbank	54_36p	-1	provisional	frame_shift_del	c.1038_1037	p.H346fs	0.994:0.994	NULL	superfamily_Thioredoxin-like,HMMPfam_Thioredoxin	(deletion:cds_exon[52024831,52024954])	no_errors
B3GNT2	10678	genome.wustl.edu	36	2	62303217	62303217	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	2	62303217	62303217	C	-	DEL	B3GNT2	NM_006577	human	genbank	54_36p	+1	reviewed	frame_shift_del	c.358	p.L120fs	1.000	NULL	HMMPfam_Galactosyl_T	(deletion:cds_exon[62302860,62304053])	no_errors
MUC13	56667	genome.wustl.edu	36	3	126113664	126113668	+	Frame_Shift_Del	DEL	TAGCC	TAGCC	-	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	TAGCC	TAGCC					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	3	126113664	126113668	TAGCC	-	DEL	MUC13	NM_033049	human	genbank	54_36p	-1	validated	frame_shift_del	c.1226_1222	p.G408fs	0.618:0.659:0.661:0.652:0.580	NULL	superfamily_EGF/Laminin,HMMSmart_SM00181,PatternScan_EGF_2,HMMPfam_SEA	(deletion:cds_exon[126113641,126113678])	no_errors
RPS14	6208	genome.wustl.edu	36	5	149806650	149806660	+	Frame_Shift_Del	DEL	AGCATATGGTG	AGCATATGGTG	-	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	AGCATATGGTG	AGCATATGGTG					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	5	149806650	149806660	AGCATATGGTG	-	DEL	RPS14	NM_001025070	human	genbank	54_36p	-1	reviewed	frame_shift_del	c.219_209	p.S70fs	0.999:1.000:1.000:0.995:1.000:1.000:0.909:1.000:1.000:1.000:1.000	superfamily_Translational machinery components,HMMPfam_Ribosomal_S11	superfamily_Translational machinery components,HMMPfam_Ribosomal_S11,PatternScan_RIBOSOMAL_S11	(deletion:cds_exon[149806558,149806719])	no_errors
NUF2	83540	genome.wustl.edu	36	1	161563964	161563973	+	Frame_Shift_Del	DEL	ACATTTTTAC	ACATTTTTAC	-	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	ACATTTTTAC	ACATTTTTAC					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	1	161563964	161563973	ACATTTTTAC	-	DEL	NUF2	NM_031423	human	genbank	54_36p	+1	reviewed	frame_shift_del	c.186_195	p.H63fs	1.000:1.000:1.000:1.000:1.000:1.000:0.995:1.000:1.000:1.000	HMMPfam_Nuf2	HMMPfam_Nuf2	(deletion:cds_exon[161563902,161563976])	no_errors
CACNA1S	779	genome.wustl.edu	36	1	199301633	199301633	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-23-1114-01B-01W-0633-09	TCGA-23-1114-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	0114ee8f-86b5-4353-b16b-45899cf9bfc5	6a619513-c467-4c62-96bc-cefa5de3c3a2	1	199301633	199301633	G	-	DEL	CACNA1S	NM_000069	human	genbank	54_36p	-1	reviewed	frame_shift_del	c.2809	p.L937fs	1.000	superfamily_SSF81324,HMMPfam_Ion_trans	superfamily_SSF81324,HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ	(deletion:cds_exon[199301589,199301696])	no_errors
