Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error
MT-ND2	0	genome.wustl.edu	36	MT	4559	4559	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	MT	4559	4559	G	A	SNP	MT-ND2	ENST00000361453	human	ensembl	54_36p	+1	known	nonsense	c.89	p.W30*	NULL	HMMPfam_Oxidored_q1	HMMPfam_Oxidored_q1,HMMPfam_NADH_dehy_S2_C	-	no_stop_codon:bad_bp_length_for_coding_region
MT-ND4	4538	genome.wustl.edu	36	MT	11629	11629	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	MT	11629	11629	C	T	SNP	MT-ND4	ENST00000361381	human	ensembl	54_36p	+1	known	missense	c.869	p.S290L	NULL	HMMPfam_Oxidored_q1	HMMPfam_Oxidored_q5_N,HMMPfam_Oxidored_q1	-	no_stop_codon:bad_bp_length_for_coding_region
TMEM184A	202915	genome.wustl.edu	36	7	1557090	1557090	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	7	1557090	1557090	G	A	SNP	TMEM184A	NM_001097620	human	genbank	54_36p	-1	validated	missense	c.274	p.R92C	1.000	HMMPfam_DUF300	HMMPfam_DUF300	-	no_errors
KREMEN2	79412	genome.wustl.edu	36	16	2955035	2955035	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	16	2955035	2955035	G	T	SNP	KREMEN2	NM_172229	human	genbank	54_36p	+1	reviewed	missense	c.269	p.R90L	1.000	superfamily_Kringle-like,HMMSmart_SM00130,HMMPfam_Kringle,PatternScan_KRINGLE_1	superfamily_Kringle-like,HMMSmart_SM00130,HMMPfam_Kringle,PatternScan_KRINGLE_1,HMMSmart_SM00321,HMMPfam_WSC,superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042	-	no_errors
COPS7A	50813	genome.wustl.edu	36	12	6708712	6708712	+	Silent	SNP	G	G	A	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	12	6708712	6708712	G	A	SNP	COPS7A	NM_016319	human	genbank	54_36p	+1	provisional	silent	c.366	p.L122	1.000	HMMPfam_PCI,HMMSmart_SM00088	HMMPfam_PCI,HMMSmart_SM00088	-	no_errors
RREB1	6239	genome.wustl.edu	36	6	7175839	7175839	+	Silent	SNP	G	G	C	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	6	7175839	7175839	G	C	SNP	RREB1	NM_001003699	human	genbank	54_36p	+1	validated	silent	c.2508	p.A836	0.000	NULL	HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_SSF57667	-	no_errors
TP53	7157	genome.wustl.edu	36	17	7518263	7518263	+	Missense_Mutation	SNP	C	T	T	rs11540652	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	17	7518263	7518263	C	T	SNP	TP53	NM_000546	human	genbank	54_36p	-1	reviewed	missense	c.743	p.R248Q	1.000	HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors
KLRC1	3821	genome.wustl.edu	36	12	10494426	10494426	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	12	10494426	10494426	C	G	SNP	KLRC1	NM_002259	human	genbank	54_36p	-1	reviewed	missense	c.207	p.E69D	0.713	NULL	superfamily_C-type lectin-like,HMMSmart_SM00034,HMMPfam_Lectin_C	-	no_errors
HERC2P2	400322	genome.wustl.edu	36	15	18903897	18903897	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	15	18903897	18903897	G	A	SNP	HERC2P2	ENST00000324413	human	ensembl	54_36p	-1	known	missense	c.2887	p.R963W	1.000	NULL	HMMPfam_MIB_HERC2	-	no_errors
TEP1	7011	genome.wustl.edu	36	14	19914117	19914117	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	14	19914117	19914117	C	T	SNP	TEP1	NM_007110	human	genbank	54_36p	-1	reviewed	missense	c.6235	p.G2079R	0.913	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	HMMPfam_TEP1_N,HMMPfam_TROVE,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_NACHT,HMMSmart_SM00320,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1,HMMPfam_WD40	-	no_errors
LOC100131046	0	genome.wustl.edu	36	16	20074841	20074841	+	RNA	SNP	T	T	C	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	16	20074841	20074841	T	C	SNP	LOC100131046	XR_037711	human	genbank	54_36p	+1	model	rna	NULL	NULL	0.355	-	-	-	pseudogene
OXSM	54995	genome.wustl.edu	36	3	25810763	25810763	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	3	25810763	25810763	A	G	SNP	OXSM	NM_017897	human	genbank	54_36p	+1	reviewed	missense	c.1154	p.H385R	1.000	superfamily_Thiolase-like,HMMPfam_Ketoacyl-synt_C	superfamily_Thiolase-like,HMMPfam_ketoacyl-synt,PatternScan_B_KETOACYL_SYNTHASE,HMMPfam_Ketoacyl-synt_C	-	no_errors
CLIC6	54102	genome.wustl.edu	36	21	35002891	35002891	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	21	35002891	35002891	A	G	SNP	CLIC6	NM_053277	human	genbank	54_36p	+1	reviewed	missense	c.1634	p.H545R	0.998	superfamily_Glutathione S-transferase (GST) C-terminal domain	superfamily_Thioredoxin-like,superfamily_Glutathione S-transferase (GST) C-terminal domain	-	no_errors
ABCD2	225	genome.wustl.edu	36	12	38280728	38280728	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	12	38280728	38280728	G	A	SNP	ABCD2	NM_005164	human	genbank	54_36p	-1	reviewed	missense	c.1558	p.L520F	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran	HMMPfam_ABC_membrane_2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran,PatternScan_ABC_TRANSPORTER_1	-	no_errors
GFAP	2670	genome.wustl.edu	36	17	40348004	40348004	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	17	40348004	40348004	C	T	SNP	GFAP	NM_002055	human	genbank	54_36p	-1	reviewed	missense	c.377	p.R126Q	0.697	HMMPfam_Filament	HMMPfam_Filament_head,HMMPfam_Filament,PatternScan_IF	-	no_errors
SUMO3	6612	genome.wustl.edu	36	21	45058388	45058388	+	Silent	SNP	G	G	T	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	21	45058388	45058388	G	T	SNP	SUMO3	NM_006936	human	genbank	54_36p	-1	validated	silent	c.81	p.S27	0.558	superfamily_Ubiquitin-like,HMMSmart_SM00213,HMMPfam_ubiquitin	superfamily_Ubiquitin-like,HMMSmart_SM00213,HMMPfam_ubiquitin	-	no_errors
PANX2	56666	genome.wustl.edu	36	22	48959604	48959604	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	22	48959604	48959604	C	T	SNP	PANX2	NM_052839	human	genbank	54_36p	+1	reviewed	missense	c.1775	p.P592L	0.000	NULL	NULL	-	no_errors
APEH	327	genome.wustl.edu	36	3	49688598	49688598	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	3	49688598	49688598	A	T	SNP	APEH	NM_001640	human	genbank	54_36p	+1	reviewed	missense	c.548	p.D183V	0.787	superfamily_Peptidase_S9A_N	superfamily_Peptidase_S9A_N,superfamily_SSF53474,HMMPfam_Peptidase_S9,PatternScan_PRO_ENDOPEP_SER	-	no_errors
PARP8	79668	genome.wustl.edu	36	5	50109715	50109715	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	5	50109715	50109715	C	G	SNP	PARP8	NM_024615	human	genbank	54_36p	+1	provisional	missense	c.574	p.L192V	1.000	NULL	superfamily_ADP-ribosylation,HMMPfam_PARP	-	no_errors
HNRNPA1L2	144983	genome.wustl.edu	36	13	52115391	52115391	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	13	52115391	52115391	G	T	SNP	HNRNPA1L2	NM_001011724	human	genbank	54_36p	+1	validated	nonsense	c.763	p.G255*	0.013	NULL	superfamily_SSF54928,HMMSmart_RRM,HMMPfam_RRM_1	-	no_errors
GSTA4	2941	genome.wustl.edu	36	6	52951294	52951294	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	6	52951294	52951294	C	A	SNP	GSTA4	NM_001512	human	genbank	54_36p	-1	reviewed	missense	c.602	p.G201V	1.000	superfamily_Glutathione S-transferase (GST) C-terminal domain	superfamily_Thioredoxin-like,HMMPfam_GST_N,superfamily_Glutathione S-transferase (GST) C-terminal domain,HMMPfam_GST_C	-	no_errors
CTCFL	140690	genome.wustl.edu	36	20	55517247	55517247	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	20	55517247	55517247	G	A	SNP	CTCFL	NM_080618	human	genbank	54_36p	-1	reviewed	missense	c.1495	p.R499C	1.000	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF468	90333	genome.wustl.edu	36	19	58036289	58036289	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	19	58036289	58036289	C	G	SNP	ZNF468	NM_001008801	human	genbank	54_36p	-1	validated	missense	c.1070	p.C357S	0.536	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2	-	no_errors
GUSB	2990	genome.wustl.edu	36	7	65084592	65084592	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	7	65084592	65084592	G	C	SNP	GUSB	NM_000181	human	genbank	54_36p	-1	validated	missense	c.14	p.S5W	0.000	NULL	superfamily_Galactose-binding domain-like,HMMPfam_Glyco_hydro_2_N,HMMPfam_Glyco_hydro_2,superfamily_beta-Galactosidase/glucuronidase domain,HMMPfam_Glyco_hydro_2_C,superfamily_(Trans)glycosidases,PatternScan_GLYCOSYL_HYDROL_F2_1,PatternScan_GLYCOSYL_HYDROL_F2_2	-	no_errors
LBXCOR1	390598	genome.wustl.edu	36	15	65905580	65905580	+	Silent	SNP	C	C	T	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	15	65905580	65905580	C	T	SNP	LBXCOR1	NM_001031807	human	genbank	54_36p	+1	provisional	silent	c.333	p.R111	0.998	HMMPfam_Ski_Sno,superfamily_Putativ_DNA_bind	HMMPfam_Ski_Sno,superfamily_Putativ_DNA_bind,superfamily_SAND_like,HMMPfam_c-SKI_SMAD_bind	-	no_errors
SLC12A4	6560	genome.wustl.edu	36	16	66543709	66543709	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	16	66543709	66543709	C	T	SNP	SLC12A4	NM_005072	human	genbank	54_36p	-1	validated	missense	c.796	p.V266M	1.000	HMMPfam_AA_permease	HMMPfam_AA_permease,HMMPfam_KCl_Cotrans_1	-	no_errors
TAF1	6872	genome.wustl.edu	36	X	70525329	70525329	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	X	70525329	70525329	G	A	SNP	TAF1	NM_004606	human	genbank	54_36p	+1	reviewed	nonsense	c.2646	p.W882*	1.000	NULL	HMMPfam_TBP-binding,superfamily_TAF_II_230,superfamily_Bromodomain,HMMSmart_BROMO,HMMPfam_Bromodomain,PatternScan_BROMODOMAIN_1	-	no_errors
TAF1	6872	genome.wustl.edu	36	X	70530736	70530736	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	X	70530736	70530736	A	C	SNP	TAF1	NM_004606	human	genbank	54_36p	+1	reviewed	missense	c.3382	p.M1128L	1.000	NULL	HMMPfam_Bromodomain,HMMSmart_BROMO,superfamily_Bromodomain,HMMPfam_TBP-binding,superfamily_TAF_II_230,PatternScan_BROMODOMAIN_1	-	no_errors
LOC643159	643159	genome.wustl.edu	36	17	71734456	71734456	+	Silent	SNP	G	G	A	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	17	71734456	71734456	G	A	SNP	LOC643159	XM_928637	human	genbank	54_36p	-1	model	silent	c.27	p.N9	0.992	NULL	HMMPfam_bZIP_1,HMMSmart_SM00338,PatternScan_BZIP_BASIC	-	pseudogene
UCP2	7351	genome.wustl.edu	36	11	73366768	73366768	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	11	73366768	73366768	G	T	SNP	UCP2	NM_003355	human	genbank	54_36p	-1	reviewed	missense	c.148	p.P50T	0.014	superfamily_Mitoch_carrier,HMMPfam_Mito_carr	superfamily_Mitoch_carrier,HMMPfam_Mito_carr	-	no_errors
LOC339843	339843	genome.wustl.edu	36	3	99861968	99861968	+	RNA	SNP	T	T	C	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	3	99861968	99861968	T	C	SNP	LOC339843	XR_016598	human	genbank	54_36p	+1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
KLF10	7071	genome.wustl.edu	36	8	103733363	103733363	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	8	103733363	103733363	T	C	SNP	KLF10	NM_005655	human	genbank	54_36p	-1	validated	missense	c.373	p.T125A	0.001	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
CXorf57	55086	genome.wustl.edu	36	X	105742608	105742608	+	Silent	SNP	C	C	T	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	X	105742608	105742608	C	T	SNP	CXorf57	NM_018015	human	genbank	54_36p	+1	validated	silent	c.642	p.S214	0.191	NULL	superfamily_Nucleic acid-binding proteins	-	no_errors
ST6GAL2	84620	genome.wustl.edu	36	2	106813046	106813046	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	2	106813046	106813046	A	G	SNP	ST6GAL2	NM_032528	human	genbank	54_36p	-1	validated	missense	c.1226	p.L409P	1.000	HMMPfam_Glyco_transf_29,superfamily_Glycoside hydrolase/deacetylase	HMMPfam_Glyco_transf_29,superfamily_Glycoside hydrolase/deacetylase	-	no_errors
ANK2	287	genome.wustl.edu	36	4	114396468	114396468	+	Silent	SNP	G	G	A	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	4	114396468	114396468	G	A	SNP	ANK2	NM_001148	human	genbank	54_36p	+1	reviewed	silent	c.1119	p.A373	0.732	superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank	superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank,HMMPfam_ZU5,PatternScan_ALDEHYDE_DEHYDR_GLU,superfamily_DEATH_like,HMMSmart_DEATH,HMMPfam_Death	-	no_errors
TES	26136	genome.wustl.edu	36	7	115676382	115676382	+	Silent	SNP	A	A	G	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	7	115676382	115676382	A	G	SNP	TES	NM_015641	human	genbank	54_36p	+1	reviewed	silent	c.186	p.K62	1.000	NULL	HMMPfam_PET,HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1,HMMPfam_LIM,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors
TRAM1L1	133022	genome.wustl.edu	36	4	118225093	118225093	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	4	118225093	118225093	G	C	SNP	TRAM1L1	NM_152402	human	genbank	54_36p	-1	validated	missense	c.905	p.S302W	0.397	HMMSmart_TLC,HMMPfam_TRAM_LAG1_CLN8	HMMPfam_TRAM1,HMMSmart_TLC,HMMPfam_TRAM_LAG1_CLN8	-	no_errors
MMP17	4326	genome.wustl.edu	36	12	130894562	130894562	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	12	130894562	130894562	C	A	SNP	MMP17	NM_016155	human	genbank	54_36p	+1	reviewed	missense	c.951	p.D317E	0.981	NULL	"HMMPfam_PG_binding_1,superfamily_PGBD-like,HMMSmart_SM00235,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Peptidase_M10,PatternScan_ZINC_PROTEASE,superfamily_Hemopexin-like domain,HMMPfam_Hemopexin,HMMSmart_SM00120"	-	no_errors
ENSG00000196979	0	genome.wustl.edu	36	9	131944089	131944089	+	Silent	SNP	G	A	A	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	9	131944089	131944089	G	A	SNP	ENSG00000196979	ENST00000358748	human	ensembl	54_36p	-1	known	silent	c.114	p.P38	0.001	NULL	NULL	-	no_errors
ATR	545	genome.wustl.edu	36	3	143757638	143757638	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	3	143757638	143757638	C	G	SNP	ATR	NM_001184	human	genbank	54_36p	-1	reviewed	missense	c.2112	p.K704N	1.000	superfamily_ARM repeat	superfamily_ARM repeat,HMMPfam_HEAT,HMMPfam_UME,HMMSmart_SM00802,superfamily_TPR-like,HMMPfam_FAT,superfamily_Protein kinase-like (PK-like),HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,PatternScan_PI3_4_KINASE_2,HMMPfam_FATC	-	no_errors
NUDT17	200035	genome.wustl.edu	36	1	144300681	144300681	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	1	144300681	144300681	G	C	SNP	NUDT17	NM_001012758	human	genbank	54_36p	-1	validated	missense	c.104	p.T35R	0.301	NULL	PatternScan_NUDIX,superfamily_NUDIX_hydrolase,HMMPfam_NUDIX	-	no_errors
SEMA6C	10500	genome.wustl.edu	36	1	149376821	149376821	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	1	149376821	149376821	C	T	SNP	SEMA6C	NM_030913	human	genbank	54_36p	-1	reviewed	missense	c.746	p.R249Q	0.729	superfamily_Sema domain,HMMSmart_SM00630,HMMPfam_Sema	superfamily_Sema domain,HMMSmart_SM00630,HMMPfam_Sema,HMMPfam_PSI,superfamily_Plexin repeat	-	no_errors
PNMA5	114824	genome.wustl.edu	36	X	151910290	151910290	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	X	151910290	151910290	G	T	SNP	PNMA5	NM_001103150	human	genbank	54_36p	-1	validated	missense	c.509	p.P170Q	0.029	NULL	NULL	-	no_errors
LOC284685	284685	genome.wustl.edu	36	1	164512510	164512510	+	RNA	SNP	G	G	A	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	1	164512510	164512510	G	A	SNP	LOC284685	XR_017685	human	genbank	54_36p	-1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
ENSG00000214210	0	genome.wustl.edu	36	3	165202295	165202295	+	Silent	SNP	C	C	T	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	3	165202295	165202295	C	T	SNP	ENSG00000214210	ENST00000397815	human	ensembl	54_36p	-1	known	silent	c.366	p.E122	0.000	HMMPfam_Neugrin	HMMPfam_Neugrin	-	no_start_codon
FMO6P	388714	genome.wustl.edu	36	1	169396940	169396940	+	Silent	SNP	G	A	A	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	1	169396940	169396940	G	A	SNP	FMO6P	ENST00000236166	human	ensembl	54_36p	+1	known	silent	c.1401	p.E467	0.988	HMMPfam_FMO-like	superfamily_SSF51905,HMMPfam_FMO-like	-	no_errors
LOC402112	402112	genome.wustl.edu	36	2	174883300	174883300	+	RNA	SNP	G	G	A	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	2	174883300	174883300	G	A	SNP	LOC402112	XR_017084	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.622	-	-	-	pseudogene
MLF1IP	79682	genome.wustl.edu	36	4	185853493	185853493	+	Silent	SNP	G	G	C	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	4	185853493	185853493	G	C	SNP	MLF1IP	NM_024629	human	genbank	54_36p	-1	validated	silent	c.1200	p.A400	0.256	NULL	NULL	-	no_errors
NGEF	25791	genome.wustl.edu	36	2	233500083	233500083	+	Silent	SNP	G	G	A	novel	unknown	TCGA-23-2643-01A-01D-1526-09	TCGA-23-2643-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91bb7ed6-82bd-4a6f-b10d-cbda2ef56ef9	27491c94-d3bf-4000-832b-63700f6a506d	2	233500083	233500083	G	A	SNP	NGEF	NM_019850	human	genbank	54_36p	-1	validated	silent	c.441	p.A147	0.907	NULL	superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326	-	no_errors
