Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error
MUC6	4588	genome.wustl.edu	36	11	1006960	1006960	+	Silent	SNP	G	G	T	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	11	1006960	1006960	G	T	SNP	MUC6	NM_005961	human	genbank	54_36p	-1	validated	silent	c.5841	p.T1947	0.002	NULL	HMMSmart_SM00216,HMMPfam_VWD,HMMPfam_C8,superfamily_Serine proterase inhibitors,HMMPfam_TIL,HMMSmart_SM00215,HMMSmart_SM00041	-	no_errors
GMDS	2762	genome.wustl.edu	36	6	1875357	1875357	+	Silent	SNP	G	G	C	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	6	1875357	1875357	G	C	SNP	GMDS	NM_001500	human	genbank	54_36p	-1	validated	silent	c.750	p.G250	1.000	superfamily_NAD(P)-bd,HMMPfam_Epimerase	superfamily_NAD(P)-bd,HMMPfam_Epimerase	-	no_errors
FOXM1	2305	genome.wustl.edu	36	12	2838605	2838605	+	Silent	SNP	A	A	G	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	12	2838605	2838605	A	G	SNP	FOXM1	NM_202002	human	genbank	54_36p	-1	validated	silent	c.1866	p.P622	0.014	NULL	"HMMSmart_SM00339,superfamily_""Winged helix"" DNA-binding domain,PatternScan_FORK_HEAD_1,HMMPfam_Fork_head,PatternScan_FORK_HEAD_2"	-	no_errors
FGF23	8074	genome.wustl.edu	36	12	4349936	4349936	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	12	4349936	4349936	G	T	SNP	FGF23	NM_020638	human	genbank	54_36p	-1	reviewed	missense	c.590	p.A197D	0.250	NULL	PatternScan_HBGF_FGF,superfamily_Cytok_IL1_like,HMMSmart_FGF,HMMPfam_FGF	-	no_errors
NLGN4X	57502	genome.wustl.edu	36	X	6079176	6079176	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	X	6079176	6079176	G	A	SNP	NLGN4X	NM_020742	human	genbank	54_36p	-1	reviewed	missense	c.332	p.P111L	1.000	HMMPfam_COesterase,superfamily_alpha/beta-Hydrolases	HMMPfam_COesterase,superfamily_alpha/beta-Hydrolases,PatternScan_CARBOXYLESTERASE_B_2	-	no_errors
LPCAT3	10162	genome.wustl.edu	36	12	6958035	6958035	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	12	6958035	6958035	C	G	SNP	LPCAT3	NM_005768	human	genbank	54_36p	-1	validated	missense	c.864	p.W288C	1.000	HMMPfam_MBOAT	HMMPfam_MBOAT	-	no_errors
NLRP14	338323	genome.wustl.edu	36	11	7048166	7048166	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	11	7048166	7048166	A	C	SNP	NLRP14	NM_176822	human	genbank	54_36p	+1	reviewed	missense	c.3049	p.I1017L	0.159	superfamily_SSF52047	superfamily_DEATH_like,HMMPfam_PAAD_DAPIN,HMMPfam_NACHT,superfamily_SSF52047	-	no_errors
A2BP1	54715	genome.wustl.edu	36	16	7323022	7323022	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	16	7323022	7323022	G	T	SNP	A2BP1	NM_145891	human	genbank	54_36p	+1	reviewed	missense	c.19	p.V7F	1.000	NULL	superfamily_SSF54928,HMMSmart_RRM,HMMPfam_RRM_1	-	no_errors
C16orf72	29035	genome.wustl.edu	36	16	9094348	9094348	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	16	9094348	9094348	A	G	SNP	C16orf72	NM_014117	human	genbank	54_36p	+1	validated	missense	c.296	p.N99S	1.000	NULL	NULL	-	no_errors
COL5A3	50509	genome.wustl.edu	36	19	9977775	9977775	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	19	9977775	9977775	C	G	SNP	COL5A3	NM_015719	human	genbank	54_36p	-1	reviewed	missense	c.221	p.G74A	0.433	HMMSmart_SM00210	HMMSmart_SM00210,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_G_2,HMMPfam_Collagen,HMMSmart_SM00038,HMMPfam_COLFI	-	no_errors
ICAM5	7087	genome.wustl.edu	36	19	10265451	10265451	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	19	10265451	10265451	G	C	SNP	ICAM5	NM_003259	human	genbank	54_36p	+1	reviewed	missense	c.1543	p.V515L	0.333	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig	HMMPfam_ICAM_N,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMPfam_ig,HMMSmart_SM00408,HMMPfam_I-set	-	no_errors
C3orf20	84077	genome.wustl.edu	36	3	14744981	14744981	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	3	14744981	14744981	G	C	SNP	C3orf20	NM_032137	human	genbank	54_36p	+1	predicted	missense	c.1722	p.K574N	0.000	NULL	NULL	-	no_errors
MRGPRX3	117195	genome.wustl.edu	36	11	18115953	18115953	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	11	18115953	18115953	C	A	SNP	MRGPRX3	NM_054031	human	genbank	54_36p	+1	provisional	missense	c.628	p.P210T	0.001	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
OR4K17	390436	genome.wustl.edu	36	14	19656121	19656121	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	14	19656121	19656121	T	A	SNP	OR4K17	NM_001004715	human	genbank	54_36p	+1	provisional	missense	c.716	p.L239Q	0.014	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
PLA2G5	5322	genome.wustl.edu	36	1	20285199	20285199	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	1	20285199	20285199	A	G	SNP	PLA2G5	NM_000929	human	genbank	54_36p	+1	reviewed	missense	c.77	p.K26R	0.006	superfamily_PhospholipaseA2,HMMPfam_Phospholip_A2_1,HMMSmart_PA2c	superfamily_PhospholipaseA2,HMMPfam_Phospholip_A2_1,HMMSmart_PA2c,PatternScan_PA2_HIS,PatternScan_PA2_ASP	-	no_errors
PDLIM2	64236	genome.wustl.edu	36	8	22498823	22498823	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	8	22498823	22498823	G	C	SNP	PDLIM2	NM_176871	human	genbank	54_36p	+1	validated	missense	c.506	p.R169P	0.000	NULL	HMMPfam_PDZ,superfamily_PDZ,HMMSmart_PDZ,PatternScan_LIM_DOMAIN_1,HMMPfam_LIM	-	no_errors
DDX53	168400	genome.wustl.edu	36	X	22929029	22929029	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	X	22929029	22929029	G	A	SNP	DDX53	NM_182699	human	genbank	54_36p	+1	validated	missense	c.934	p.V312M	0.913	superfamily_SSF52540,HMMSmart_DEXDc,HMMPfam_DEAD	superfamily_SSF54791,HMMSmart_KH,HMMPfam_KH_1,superfamily_SSF52540,HMMSmart_DEXDc,HMMPfam_DEAD,PatternScan_DEAD_ATP_HELICASE,HMMSmart_HELICc,HMMPfam_Helicase_C	-	no_errors
SEZ6L	23544	genome.wustl.edu	36	22	25018766	25018766	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	22	25018766	25018766	G	T	SNP	SEZ6L	NM_021115	human	genbank	54_36p	+1	validated	missense	c.489	p.K163N	0.374	NULL	superfamily_Spermadhesin CUB domain,HMMSmart_SM00042,superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032,HMMPfam_CUB	-	no_errors
ZDHHC18	84243	genome.wustl.edu	36	1	27052871	27052871	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	1	27052871	27052871	C	G	SNP	ZDHHC18	NM_032283	human	genbank	54_36p	+1	provisional	missense	c.1117	p.P373A	0.972	NULL	HMMPfam_zf-DHHC	-	no_errors
C16orf58	64755	genome.wustl.edu	36	16	31410878	31410878	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	16	31410878	31410878	T	C	SNP	C16orf58	NM_022744	human	genbank	54_36p	-1	predicted	missense	c.1262	p.K421R	0.131	HMMPfam_DUF647	HMMPfam_DUF647	-	no_errors
SYNJ1	8867	genome.wustl.edu	36	21	32960308	32960308	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	21	32960308	32960308	G	A	SNP	SYNJ1	NM_003895	human	genbank	54_36p	-1	validated	missense	c.1961	p.A654V	1.000	superfamily_DNase I-like,HMMSmart_SM00128,HMMPfam_Exo_endo_phos	HMMPfam_Syja_N,superfamily_DNase I-like,HMMSmart_SM00128,HMMPfam_Exo_endo_phos,HMMPfam_DUF1866,superfamily_RNA-binding domain RBD	-	no_errors
COL8A2	1296	genome.wustl.edu	36	1	36335833	36335833	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	1	36335833	36335833	G	A	SNP	COL8A2	NM_005202	human	genbank	54_36p	-1	validated	missense	c.2036	p.S679L	1.000	HMMSmart_SM00110,superfamily_TNF-like,HMMPfam_C1q	HMMPfam_Collagen,HMMSmart_SM00110,superfamily_TNF-like,HMMPfam_C1q	-	no_errors
UBTF	7343	genome.wustl.edu	36	17	39643990	39643990	+	Silent	SNP	G	G	A	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	17	39643990	39643990	G	A	SNP	UBTF	NM_014233	human	genbank	54_36p	-1	validated	silent	c.1146	p.I382	1.000	superfamily_HMG-box	superfamily_HMG-box,HMMSmart_SM00398,HMMPfam_HMG_box	-	no_errors
HNRNPA3P1	10151	genome.wustl.edu	36	10	43604938	43604938	+	RNA	SNP	C	C	A	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	10	43604938	43604938	C	A	SNP	HNRNPA3P1	NR_002726	human	genbank	54_36p	-1	validated	rna	NULL	NULL	0.998	-	-	-	pseudogene
SAMD4B	55095	genome.wustl.edu	36	19	44539476	44539476	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	19	44539476	44539476	C	T	SNP	SAMD4B	NM_018028	human	genbank	54_36p	+1	provisional	missense	c.103	p.R35C	1.000	NULL	HMMSmart_SM00454,HMMPfam_SAM_1,superfamily_SAM/Pointed domain	-	no_errors
POLE2	5427	genome.wustl.edu	36	14	49201583	49201583	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	14	49201583	49201583	T	G	SNP	POLE2	NM_002692	human	genbank	54_36p	-1	provisional	missense	c.625	p.S209R	1.000	NULL	HMMPfam_DNA_pol_E_B	-	no_errors
TYMP	1890	genome.wustl.edu	36	22	49312943	49312943	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	22	49312943	49312943	C	T	SNP	TYMP	NM_001953	human	genbank	54_36p	-1	reviewed	missense	c.586	p.G196R	0.883	superfamily_Glyco_trans_3,HMMPfam_Glycos_transf_3	superfamily_Glyco_trans_3,HMMPfam_Glycos_trans_3N,HMMPfam_Glycos_transf_3,PatternScan_THYMID_PHOSPHORYLASE,superfamily_PYNP_C,HMMPfam_PYNP_C	-	no_errors
GPR4	2828	genome.wustl.edu	36	19	50786176	50786176	+	Silent	SNP	G	G	A	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	19	50786176	50786176	G	A	SNP	GPR4	NM_005282	human	genbank	54_36p	-1	validated	silent	c.789	p.R263	0.140	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
WDR7	23335	genome.wustl.edu	36	18	52575289	52575289	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	18	52575289	52575289	C	T	SNP	WDR7	NM_015285	human	genbank	54_36p	+1	reviewed	missense	c.2467	p.R823C	1.000	NULL	HMMSmart_SM00320,HMMPfam_WD40,superfamily_Prolyl oligopeptidase N-terminal domain,PatternScan_WD_REPEATS_1,superfamily_WD40 repeat-like	-	no_errors
SEPT14	346288	genome.wustl.edu	36	7	55831149	55831149	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	7	55831149	55831149	T	G	SNP	SEPT14	NM_207366	human	genbank	54_36p	-1	validated	missense	c.1250	p.Q417P	0.064	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Septin	-	no_errors
OR5M9	390162	genome.wustl.edu	36	11	55987010	55987010	+	Silent	SNP	G	G	C	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	11	55987010	55987010	G	C	SNP	OR5M9	NM_001004743	human	genbank	54_36p	-1	provisional	silent	c.444	p.V148	0.015	superfamily_SSF81321,HMMPfam_7tm_1	PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321,HMMPfam_7tm_1	-	no_errors
EXOC3L	283849	genome.wustl.edu	36	16	65780196	65780196	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	16	65780196	65780196	G	A	SNP	EXOC3L	NM_178516	human	genbank	54_36p	-1	validated	missense	c.356	p.P119L	0.702	NULL	HMMPfam_Sec6	-	no_errors
ANKRA2	57763	genome.wustl.edu	36	5	72892811	72892811	+	Silent	SNP	G	G	C	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	5	72892811	72892811	G	C	SNP	ANKRA2	NM_023039	human	genbank	54_36p	-1	provisional	silent	c.348	p.T116	0.982	NULL	superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank	-	no_errors
C11orf67	28971	genome.wustl.edu	36	11	77231283	77231283	+	Silent	SNP	G	G	T	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	11	77231283	77231283	G	T	SNP	C11orf67	NM_024684	human	genbank	54_36p	+1	predicted	silent	c.93	p.G31	0.998	superfamily_Hypothetical protein MT938 (MTH938),HMMPfam_DUF498	superfamily_Hypothetical protein MT938 (MTH938),HMMPfam_DUF498	-	no_errors
LOC646956	646956	genome.wustl.edu	36	15	77316071	77316071	+	RNA	SNP	C	C	A	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	15	77316071	77316071	C	A	SNP	LOC646956	XR_017376	human	genbank	54_36p	+1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
RIPPLY2	134701	genome.wustl.edu	36	6	84620176	84620176	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	6	84620176	84620176	A	C	SNP	RIPPLY2	NM_001009994	human	genbank	54_36p	+1	provisional	missense	c.139	p.K47Q	0.000	NULL	NULL	-	no_errors
ASB2	51676	genome.wustl.edu	36	14	93483491	93483491	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	14	93483491	93483491	C	T	SNP	ASB2	NM_016150	human	genbank	54_36p	-1	reviewed	missense	c.865	p.G289S	1.000	superfamily_Ankyrin repeat,HMMPfam_Ank,HMMSmart_SM00248	HMMSmart_SM00248,superfamily_Ankyrin repeat,HMMPfam_Ank,PatternScan_ODR_DC_2_1,PatternScan_C_TYPE_LECTIN_1,HMMSmart_SM00253,HMMPfam_SOCS_box	-	no_errors
FAM120A	23196	genome.wustl.edu	36	9	95273394	95273394	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	9	95273394	95273394	G	C	SNP	FAM120A	NM_014612	human	genbank	54_36p	+1	validated	missense	c.625	p.G209R	1.000	superfamily_PIN domain-like	superfamily_PIN domain-like	-	no_errors
JAG2	3714	genome.wustl.edu	36	14	104685720	104685720	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	14	104685720	104685720	T	C	SNP	JAG2	NM_002226	human	genbank	54_36p	-1	reviewed	missense	c.2122	p.T708A	1.000	superfamily_EGF/Laminin,HMMSmart_SM00179,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2	HMMPfam_MNNL,HMMPfam_DSL,HMMSmart_SM00051,HMMSmart_SM00181,superfamily_Concanavalin A-like lectins/glucanases,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_EGF/Laminin,HMMSmart_SM00179,HMMPfam_EGF,PatternScan_EGF_CA,PatternScan_ASX_HYDROXYL,HMMPfam_EGF_CA,HMMSmart_SM00215,HMMSmart_SM00214	-	no_errors
PPP1R3A	5506	genome.wustl.edu	36	7	113306437	113306437	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	7	113306437	113306437	C	T	SNP	PPP1R3A	NM_002711	human	genbank	54_36p	-1	reviewed	missense	c.1946	p.S649N	0.000	NULL	HMMPfam_CBM_21	-	no_errors
IL10RA	3587	genome.wustl.edu	36	11	117374690	117374690	+	Silent	SNP	A	A	T	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	11	117374690	117374690	A	T	SNP	IL10RA	NM_001558	human	genbank	54_36p	+1	reviewed	silent	c.861	p.P287	0.000	NULL	HMMPfam_IL10Ra-bind,superfamily_Fibronectin type III	-	no_errors
INPP5F	22876	genome.wustl.edu	36	10	121541030	121541030	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	10	121541030	121541030	G	T	SNP	INPP5F	NM_014937	human	genbank	54_36p	+1	reviewed	missense	c.327	p.K109N	1.000	HMMPfam_Syja_N	HMMPfam_Syja_N	-	no_errors
ACTRT1	139741	genome.wustl.edu	36	X	127012963	127012963	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	X	127012963	127012963	C	A	SNP	ACTRT1	NM_138289	human	genbank	54_36p	-1	provisional	missense	c.904	p.G302W	1.000	HMMPfam_Actin,HMMSmart_ACTIN,superfamily_SSF53067	HMMPfam_Actin,superfamily_SSF53067,HMMSmart_ACTIN	-	no_errors
GPC3	2719	genome.wustl.edu	36	X	132715407	132715407	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	X	132715407	132715407	C	T	SNP	GPC3	NM_004484	human	genbank	54_36p	-1	reviewed	missense	c.800	p.G267E	1.000	HMMPfam_Glypican,PatternScan_GLYPICAN	HMMPfam_Glypican,PatternScan_GLYPICAN	-	no_errors
ATP6V0A4	50617	genome.wustl.edu	36	7	138091762	138091762	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	7	138091762	138091762	T	A	SNP	ATP6V0A4	NM_020632	human	genbank	54_36p	-1	reviewed	missense	c.703	p.I235F	1.000	HMMPfam_V_ATPase_I	HMMPfam_V_ATPase_I	-	no_errors
PCDHA2	56146	genome.wustl.edu	36	5	140155602	140155602	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	5	140155602	140155602	A	C	SNP	PCDHA2	NM_018905	human	genbank	54_36p	+1	reviewed	missense	c.869	p.Q290P	0.000	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	superfamily_Cadherin-like,HMMSmart_SM00112,HMMPfam_Cadherin_2,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors
SPANXN1	494118	genome.wustl.edu	36	X	144145003	144145003	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	X	144145003	144145003	C	A	SNP	SPANXN1	NM_001009614	human	genbank	54_36p	+1	validated	missense	c.196	p.Q66K	0.039	NULL	HMMPfam_SPAN-X	-	no_errors
CNTNAP2	26047	genome.wustl.edu	36	7	146436259	146436259	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	7	146436259	146436259	C	T	SNP	CNTNAP2	NM_014141	human	genbank	54_36p	+1	reviewed	missense	c.638	p.A213V	0.847	superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282	HMMSmart_SM00231,superfamily_Galactose-binding domain-like,HMMPfam_F5_F8_type_C,PatternScan_FA58C_1,PatternScan_FA58C_2,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282,HMMPfam_Laminin_G_2,HMMSmart_SM00181,HMMPfam_EGF,superfamily_Fibrinogen C-terminal domain-like,PatternScan_GLYCO_HORMONE_BETA_1,HMMSmart_SM00294	-	no_errors
PDIA4	9601	genome.wustl.edu	36	7	148333347	148333347	+	Silent	SNP	C	C	T	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	7	148333347	148333347	C	T	SNP	PDIA4	NM_004911	human	genbank	54_36p	-1	validated	silent	c.1341	p.E447	1.000	NULL	superfamily_Thioredoxin-like,HMMPfam_Thioredoxin,PatternScan_THIOREDOXIN_1	-	no_errors
ZNF282	8427	genome.wustl.edu	36	7	148526737	148526737	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	7	148526737	148526737	T	G	SNP	ZNF282	NM_003575	human	genbank	54_36p	+1	validated	missense	c.545	p.V182G	1.000	NULL	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
WWTR1	25937	genome.wustl.edu	36	3	150773393	150773393	+	Silent	SNP	G	A	A	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	3	150773393	150773393	G	A	SNP	WWTR1	NM_015472	human	genbank	54_36p	-1	provisional	silent	c.516	p.V172	0.909	NULL	superfamily_WW_Rsp5_WWP,HMMSmart_WW,HMMPfam_WW,PatternScan_WW_DOMAIN_1	-	no_errors
LCE2C	353140	genome.wustl.edu	36	1	150915289	150915289	+	Silent	SNP	C	C	A	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	1	150915289	150915289	C	A	SNP	LCE2C	NM_178429	human	genbank	54_36p	+1	validated	silent	c.174	p.P58	0.899	NULL	NULL	-	no_errors
C3orf44	131831	genome.wustl.edu	36	3	151882721	151882721	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	3	151882721	151882721	C	G	SNP	C3orf44	NM_152394	human	genbank	54_36p	-1	validated	missense	c.856	p.D286H	0.170	NULL	NULL	-	no_errors
SYNE1	23345	genome.wustl.edu	36	6	152599075	152599075	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	6	152599075	152599075	A	T	SNP	SYNE1	NM_182961	human	genbank	54_36p	-1	reviewed	missense	c.20256	p.D6752E	1.000	superfamily_Spectrin repeat,HMMSmart_SM00150	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_SM00033,PatternScan_ACTININ_2,superfamily_Spectrin repeat,HMMSmart_SM00150,HMMPfam_Spectrin,HMMPfam_KASH	-	no_errors
ENSG00000164711	0	genome.wustl.edu	36	6	160823694	160823694	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	6	160823694	160823694	T	A	SNP	ENSG00000164711	ENST00000297289	human	ensembl	54_36p	-1	known	missense	c.284	p.K95M	0.355	superfamily_Kringle-like,HMMSmart_SM00130,HMMPfam_Kringle	superfamily_Kringle-like,HMMSmart_SM00130,HMMPfam_Kringle	-	no_errors
SLC19A2	10560	genome.wustl.edu	36	1	167721559	167721559	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	1	167721559	167721559	G	C	SNP	SLC19A2	NM_006996	human	genbank	54_36p	-1	reviewed	missense	c.70	p.R24G	0.935	NULL	superfamily_MFS general substrate transporter,HMMPfam_Folate_carrier,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
ATF2	1386	genome.wustl.edu	36	2	175670519	175670519	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	2	175670519	175670519	C	G	SNP	ATF2	NM_001880	human	genbank	54_36p	-1	reviewed	missense	c.877	p.D293H	1.000	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_bZIP_1,HMMSmart_SM00338,PatternScan_BZIP_BASIC	-	no_errors
PRG4	10216	genome.wustl.edu	36	1	184532660	184532660	+	Silent	SNP	G	G	T	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	1	184532660	184532660	G	T	SNP	PRG4	NM_005807	human	genbank	54_36p	+1	reviewed	silent	c.30	p.L10	0.051	NULL	HMMSmart_SM00201,HMMPfam_Somatomedin_B,superfamily_Somatomedin B domain,PatternScan_SMB_1,superfamily_Hemopexin-like domain,HMMPfam_Hemopexin,HMMSmart_SM00120,PatternScan_HEMOPEXIN	-	no_errors
MDM4	4194	genome.wustl.edu	36	1	202780336	202780336	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-23-2647-01A-01D-1526-09	TCGA-23-2647-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	91a0e33a-5276-4a41-90bf-4355cb635318	53a93b80-fb59-496c-bf1a-c039810b942d	1	202780336	202780336	G	C	SNP	MDM4	NM_002393	human	genbank	54_36p	+1	validated	missense	c.723	p.L241F	1.000	NULL	superfamily_SWIB/MDM2 domain,HMMPfam_SWIB,PatternScan_ZF_RANBP2_1,superfamily_RING/U-box	-	no_errors
