Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error
ADORA3	140	genome.wustl.edu	36	1	111844530	111844530	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	1	111844530	111844530	C	A	SNP	ADORA3	NM_000677	human	genbank	54_36p	-1	reviewed	missense	c.522	p.M174I	1	NULL	-	-	no_errors
SPTA1	6708	genome.wustl.edu	36	1	156904273	156904273	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	1	156904273	156904273	T	G	SNP	SPTA1	NM_003126	human	genbank	54_36p	-1	reviewed	missense	c.2037	p.K679N	1	NULL	-	-	no_errors
ATF6	22926	genome.wustl.edu	36	1	160088228	160088228	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	1	160088228	160088228	T	C	SNP	ATF6	NM_007348	human	genbank	54_36p	1	validated	missense	c.1412	p.I471T	0.18	NULL	-	-	no_errors
SPEN	23013	genome.wustl.edu	36	1	16075631	16075631	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	1	16075631	16075631	G	C	SNP	SPEN	NM_015001	human	genbank	54_36p	1	reviewed	missense	c.752	p.R251T	1	NULL	HMMPfam_RRM_1;HMMPfam_SPOC;superfamily_SPOC domain-like;superfamily_RNA-binding domain RBD	-	no_errors
RNASEL	6041	genome.wustl.edu	36	1	180812026	180812026	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	Sanger_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	1	180812026	180812026	T	C	SNP	RNASEL	NM_021133	human	genbank	54_36p	-1	reviewed	missense	c.2027	p.E676G	0	NULL	-	-	no_errors
PLA2G4A	5321	genome.wustl.edu	36	1	185186473	185186473	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	1	185186473	185186473	C	G	SNP	PLA2G4A	NM_024420	human	genbank	54_36p	1	reviewed	missense	c.1326	p.H442Q	0.96	HMMPfam_PLA2_B	superfamily_C2 domain (Calcium/lipid-binding domain CaLB);superfamily_FabD/lysophospholipase-like;HMMPfam_C2;HMMPfam_PLA2_B	-	no_errors
UBR4	23352	genome.wustl.edu	36	1	19314710	19314710	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	1	19314710	19314710	C	A	SNP	UBR4	NM_020765	human	genbank	54_36p	-1	validated	missense	c.10832	p.R3611L	1	NULL	-	-	no_errors
KIAA0090	23065	genome.wustl.edu	36	1	19438993	19438993	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	1	19438993	19438993	G	A	SNP	KIAA0090	NM_015047	human	genbank	54_36p	-1	predicted	missense	c.860	p.S287F	0.88	NULL	-	-	no_errors
C1orf107	27042	genome.wustl.edu	36	1	208070891	208070893	+	In_Frame_Del	DEL	GAG	GAG	-	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	GAG	GAG	GAG	-	GAG	GAG	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	1	208070891	208070893	GAG	-	DEL	C1orf107	NM_014388	human	genbank	54_36p	1	validated	in_frame_del	c.268_270	p.E93in_frame_del	0.861:0.831:0.735	NULL	-	(deletion:cds_exon[208070771;208071011])	no_errors
C1orf57	84284	genome.wustl.edu	36	1	231180580	231180580	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	1	231180580	231180580	G	A	SNP	C1orf57	NM_032324	human	genbank	54_36p	1	predicted	missense	c.553	p.V185M	0.66	NULL	-	-	no_errors
PUM1	9698	genome.wustl.edu	36	1	31211533	31211533	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	1	31211533	31211533	T	C	SNP	PUM1	NM_001020658	human	genbank	54_36p	-1	reviewed	missense	c.1969	p.S657G	1	NULL	-	-	no_errors
GJB4	127534	genome.wustl.edu	36	1	35000167	35000167	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	Sanger_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	1	35000167	35000167	G	T	SNP	GJB4	NM_153212	human	genbank	54_36p	1	validated	missense	c.725	p.G242V	0	NULL	-	-	no_errors
LRRC7	57554	genome.wustl.edu	36	1	70277021	70277021	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	1	70277021	70277021	G	C	SNP	LRRC7	NM_020794	human	genbank	54_36p	1	validated	missense	c.2812	p.D938H	1	NULL	HMMPfam_PDZ;superfamily_PDZ domain-like;HMMPfam_LRR_1;superfamily_RNI-like;superfamily_L domain-like	-	no_errors
ACADM	34	genome.wustl.edu	36	1	75978367	75978367	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	1	75978367	75978367	G	A	SNP	ACADM	NM_000016	human	genbank	54_36p	1	reviewed	missense	c.583	p.G195R	1	HMMPfam_Acyl-CoA_dh_M	HMMPfam_Acyl-CoA_dh_1;HMMPfam_Acyl-CoA_dh_M;HMMPfam_Acyl-CoA_dh_N;superfamily_Acyl-CoA dehydrogenase C-terminal domain-like;superfamily_Acyl-CoA dehydrogenase NM domain-like	-	no_errors
ENO1	2023	genome.wustl.edu	36	1	8849058	8849058	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	1	8849058	8849058	G	A	SNP	ENO1	NM_001428	human	genbank	54_36p	-1	reviewed	silent	c.534	p.F178	1	HMMPfam_Enolase_C	HMMPfam_Enolase_C;HMMPfam_Enolase_N;superfamily_Enolase C-terminal domain-like;superfamily_Enolase N-terminal domain-like	-	no_errors
CACNB2	783	genome.wustl.edu	36	10	18827469	18827469	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	10	18827469	18827469	T	A	SNP	CACNB2	ENST00000402317	human	ensembl	54_36p	1	known	missense	c.351	p.F117L		NULL	-	-	no_errors
DDX21	9188	genome.wustl.edu	36	10	70391886	70391886	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	10	70391886	70391886	C	A	SNP	DDX21	NM_004728	human	genbank	54_36p	1	reviewed	missense	c.574	p.P192T	1	NULL	-	-	no_errors
USP54	159195	genome.wustl.edu	36	10	74972831	74972831	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	10	74972831	74972831	G	A	SNP	USP54	NM_152586	human	genbank	54_36p	-1	provisional	missense	c.440	p.A147V	1	NULL	-	-	no_errors
LARP4B	23185	genome.wustl.edu	36	10	865530	865530	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	10	865530	865530	C	T	SNP	LARP5	NM_015155	human	genbank	54_36p	-1	provisional	missense	c.920	p.R307Q	1	NULL	"HMMPfam_La;superfamily_""Winged helix"" DNA-binding domain;superfamily_RNA-binding domain RBD"	-	no_errors
BIRC3	330	genome.wustl.edu	36	11	101700819	101700819	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	11	101700819	101700819	A	G	SNP	BIRC3	NM_001165	human	genbank	54_36p	1	reviewed	silent	c.369	p.S123		NULL	HMMPfam_CARD;HMMPfam_BIR;HMMPfam_zf-C3HC4;superfamily_DEATH domain;superfamily_Inhibitor of apoptosis (IAP) repeat	-	no_errors
DYNC2H1	79659	genome.wustl.edu	36	11	102580816	102580816	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	11	102580816	102580816	C	T	SNP	DYNC2H1	NM_001080463	human	genbank	54_36p	1	provisional	silent	c.8367	p.F2789	1	NULL	-	-	no_errors
SLC17A6	57084	genome.wustl.edu	36	11	22337568	22337569	+	Silent	DNP	CC	CC	AT	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	CC	CC	CC	AT	CC	CC	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	11	22337568	22337569	CC	AT	DNP	SLC17A6	NM_020346	human	genbank	54_36p	1	validated	silent	c.492_493	p.STLN163	1.000:1.000	HMMPfam_MFS_1	HMMPfam_MFS_1;superfamily_MFS general substrate transporter	-	no_errors
OR10Q1	219960	genome.wustl.edu	36	11	57752201	57752201	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	11	57752201	57752201	C	T	SNP	OR10Q1	NM_001004471	human	genbank	54_36p	-1	provisional	silent	c.723	p.R241	0.42	NULL	-	-	no_errors
MAML2	84441	genome.wustl.edu	36	11	95351789	95351789	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	11	95351789	95351789	G	A	SNP	MAML2	NM_032427	human	genbank	54_36p	-1	validated	missense	c.3442	p.L1148F	1	NULL	-	-	no_errors
POLR3B	55703	genome.wustl.edu	36	12	105281792	105281792	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	12	105281792	105281792	G	T	SNP	POLR3B	NM_018082	human	genbank	54_36p	1	provisional	silent	c.87	p.L29	1	NULL	HMMPfam_RNA_pol_Rpb2_6;HMMPfam_RNA_pol_Rpb2_7;HMMPfam_RNA_pol_Rpb2_2;HMMPfam_RNA_pol_Rpb2_1;HMMPfam_RNA_pol_Rpb2_3;HMMPfam_RNA_pol_Rpb2_4;HMMPfam_RNA_pol_Rpb2_5;superfamily_beta and beta-prime subunits of DNA dependent RNA-polymerase	-	no_errors
CIT	11113	genome.wustl.edu	36	12	118695044	118695044	+	Silent	SNP	T	T	C	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	12	118695044	118695044	T	C	SNP	CIT	NM_007174	human	genbank	54_36p	-1	validated	silent	c.1995	p.A665	0.91	NULL	HMMPfam_Pkinase;HMMPfam_Pkinase_C;HMMPfam_CNH;HMMPfam_PH;HMMPfam_C1_1;superfamily_Protein kinase-like (PK-like);superfamily_HR1 repeat;superfamily_PH domain-like;superfamily_Cysteine-rich domain	-	no_errors
DNM1L	10059	genome.wustl.edu	36	12	32775673	32775673	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	12	32775673	32775673	G	T	SNP	DNM1L	NM_012062	human	genbank	54_36p	1	reviewed	missense	c.1317	p.M439I	1	HMMPfam_Dynamin_M	HMMPfam_Dynamin_M;HMMPfam_Dynamin_N;HMMPfam_GED;superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
KRT2	3849	genome.wustl.edu	36	12	51325292	51325292	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	12	51325292	51325292	G	A	SNP	KRT2	NM_000423	human	genbank	54_36p	-1	reviewed	silent	c.1698	p.G566	0.99	NULL	HMMPfam_Filament;superfamily_Prefoldin	-	no_errors
PPP1R12A	4659	genome.wustl.edu	36	12	78740067	78740067	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	12	78740067	78740067	A	G	SNP	PPP1R12A	NM_002480	human	genbank	54_36p	-1	reviewed	missense	c.827	p.I276T	1	NULL	HMMPfam_Ank;superfamily_Ankyrin repeat	-	no_errors
ENSG00000205940	0	genome.wustl.edu	36	4	12948665	12948665	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	4	12948665	12948665	G	T	SNP	ENSG00000205940	ENST00000382444	human	ensembl	54_36p	1	known	missense	c.918	p.E306D	1	NULL	-	-	no_stop_codon:bad_bp_length_for_coding_region
LOC283523	283523	genome.wustl.edu	36	13	18153787	18153787	+	Nonsense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	13	18153787	18153787	A	T	SNP	LOC283523	XM_001714856	human	genbank	54_36p	1	model	nonsense	c.1243	p.K415*	1	NULL	-	-	pseudogene
SACS	26278	genome.wustl.edu	36	13	22811133	22811133	+	Nonsense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	13	22811133	22811133	G	A	SNP	SACS	NM_014363	human	genbank	54_36p	-1	validated	nonsense	c.4441	p.Q1481*	1	NULL	-	-	no_errors
B3GALTL	145173	genome.wustl.edu	36	13	30758859	30758859	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	13	30758859	30758859	C	T	SNP	B3GALTL	NM_194318	human	genbank	54_36p	1	reviewed	missense	c.967	p.H323Y	1	HMMPfam_Fringe	HMMPfam_Fringe	-	no_errors
RB1	5925	genome.wustl.edu	36	13	47937211	47937211	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	13	47937211	47937211	G	C	SNP	RB1	NM_000321	human	genbank	54_36p	1	reviewed	missense	c.2288	p.R763T	1	HMMPfam_RB_B	RB_B;HMMPfam_RB_B;RB_A;HMMPfam_RB_A;Rb_C;HMMPfam_Rb_C	-	no_errors
PCDH9	5101	genome.wustl.edu	36	13	66103459	66103459	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	13	66103459	66103459	C	T	SNP	PCDH9	NM_203487	human	genbank	54_36p	-1	reviewed	missense	c.3224	p.G1075D	1	NULL	HMMPfam_Cadherin;HMMPfam_Cadherin_2;HMMPfam_Protocadherin;superfamily_Cadherin-like	-	no_errors
LOC390413	390413	genome.wustl.edu	36	13	76453818	76453818	+	RNA	SNP	C	C	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	13	76453818	76453818	C	T	SNP	LOC390413	XR_017528	human	genbank	54_36p	-1	model	rna	NULL	NULL	1	-	-	-	pseudogene
ADSSL1	122622	genome.wustl.edu	36	14	104282285	104282285	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	14	104282285	104282285	T	A	SNP	ADSSL1	NM_199165	human	genbank	54_36p	1	validated	missense	c.1294	p.F432I	1	HMMPfam_Adenylsucc_synt	HMMPfam_Adenylsucc_synt,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
METT11D1	64745	genome.wustl.edu	36	14	20534531	20534531	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	14	20534531	20534531	G	A	SNP	METT11D1	NM_001029991	human	genbank	54_36p	1	validated	silent	c.1086	p.K362	0.5	HMMPfam_Rsm22	HMMPfam_Rsm22;superfamily_S-adenosyl-L-methionine-dependent methyltransferases	-	no_errors
SOS2	6655	genome.wustl.edu	36	14	49693585	49693585	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	14	49693585	49693585	C	G	SNP	SOS2	NM_006939	human	genbank	54_36p	-1	validated	missense	c.1939	p.E647Q	1	HMMPfam_RasGEF_N	HMMPfam_RhoGEF;HMMPfam_RasGEF_N;HMMPfam_PH;HMMPfam_RasGEF;HMMPfam_Histone;superfamily_Ras GEF;superfamily_Histone-fold;superfamily_DBL homology domain (DH-domain);superfamily_PH domain-like	-	no_errors
MPP5	64398	genome.wustl.edu	36	14	66860274	66860274	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	14	66860274	66860274	A	T	SNP	MPP5	NM_022474	human	genbank	54_36p	1	validated	missense	c.1843	p.N615Y	1	HMMPfam_Guanylate_kin	superfamily_SH3-domain;HMMPfam_PDZ;superfamily_PDZ domain-like;HMMPfam_Guanylate_kin;HMMPfam_SH3_2;HMMPfam_L27;HMMPfam_L27_N;superfamily_L27 domain;superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
TTC7B	145567	genome.wustl.edu	36	14	90266244	90266244	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	14	90266244	90266244	G	T	SNP	TTC7B	NM_001010854	human	genbank	54_36p	-1	provisional	missense	c.626	p.P209H	1	NULL	HMMPfam_TPR_1;HMMPfam_TPR_2;superfamily_TPR-like	-	no_errors
SMEK1	55671	genome.wustl.edu	36	14	91001386	91001386	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	14	91001386	91001386	C	A	SNP	SMEK1	NM_032560	human	genbank	54_36p	-1	validated	missense	c.1752	p.M584I	1	NULL	-	-	no_errors
LOC100128116	100128116	genome.wustl.edu	36	5	146067018	146067018	+	RNA	SNP	C	C	G	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	5	146067018	146067018	C	G	SNP	LOC100128116	XR_039194	human	genbank	54_36p	-1	model	rna	NULL	NULL	1	-	-	-	pseudogene
OR4N4	283694	genome.wustl.edu	36	15	19884234	19884234	+	Nonsense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	15	19884234	19884234	C	A	SNP	OR4N4	NM_001005241	human	genbank	54_36p	1	provisional	nonsense	c.398	p.S133*		NULL	-	-	no_errors
HERC2	8924	genome.wustl.edu	36	15	26132886	26132886	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	15	26132886	26132886	G	A	SNP	HERC2	NM_004667	human	genbank	54_36p	-1	validated	silent	c.6486	p.L2162	1	NULL	HMMPfam_RCC1;HMMPfam_ZZ;HMMPfam_HECT;superfamily_Spermadhesin CUB domain;HMMPfam_Cyt-b5;superfamily_Cytochrome b5-like heme/steroid binding domain;superfamily_Galactose-binding domain-like;superfamily_RCC1/BLIP-II;HMMPfam_MIB_HERC2;superfamily_Hect E3 ligase catalytic domain	-	no_errors
SV2B	9899	genome.wustl.edu	36	15	89570923	89570923	+	Silent	SNP	G	G	C	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	15	89570923	89570923	G	C	SNP	SV2B	NM_014848	human	genbank	54_36p	1	validated	silent	c.426	p.L142	1	HMMPfam_MFS_1	HMMPfam_MFS_1;superfamily_MFS general substrate transporter	-	no_errors
LOC728138	728138	genome.wustl.edu	36	16	14990025	14990025	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	16	14990025	14990025	C	T	SNP	LOC728138	XM_001128282	human	genbank	54_36p	-1	model	silent	c.1419	p.A473	1	NULL	-	-	no_errors
ADCY9	115	genome.wustl.edu	36	16	3997506	3997506	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	16	3997506	3997506	C	A	SNP	ADCY9	NM_001116	human	genbank	54_36p	-1	reviewed	missense	c.1748	p.C583F	1	NULL	HMMPfam_Guanylate_cyc;superfamily_p53-like transcription factors;superfamily_Adenylyl and guanylyl cyclase catalytic domain	-	no_errors
MYH1	4619	genome.wustl.edu	36	17	10345698	10345698	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	17	10345698	10345698	T	C	SNP	MYH1	NM_005963	human	genbank	54_36p	-1	reviewed	missense	c.3286	p.S1096G	1	HMMPfam_Myosin_tail_1	HMMPfam_IQ;HMMPfam_Myosin_head;HMMPfam_Myosin_tail_1;HMMPfam_Myosin_N;superfamily_Prefoldin;superfamily_tRNA-binding arm;superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
PRPF8	10594	genome.wustl.edu	36	17	1525263	1525263	+	Missense_Mutation	SNP	C	G	G	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	G	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	17	1525263	1525263	C	G	SNP	PRPF8	NM_006445	human	genbank	54_36p	-1	reviewed	missense	c.2993	p.R998P	1	NULL	HMMPfam_Mov34;superfamily_Cupredoxins;HMMPfam_PRO8NT;HMMPfam_PROCN;HMMPfam_PROCT	-	no_errors
OR3A4	390756	genome.wustl.edu	36	17	3160859	3160859	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	17	3160859	3160859	C	G	SNP	OR3A4	ENST00000323164	human	ensembl	54_36p	1	known	missense	c.505	p.L169V	0.01	HMMPfam_7tm_1	HMMPfam_7tm_1;superfamily_Family A G protein-coupled receptor-like	-	no_errors
KRT14	3861	genome.wustl.edu	36	17	36993338	36993338	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	17	36993338	36993338	C	T	SNP	KRT14	NM_000526	human	genbank	54_36p	-1	reviewed	silent	c.1044	p.Q348	1	HMMPfam_Filament	HMMPfam_Filament;superfamily_Prefoldin	-	no_errors
EZH1	2145	genome.wustl.edu	36	17	38108443	38108443	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	Sanger_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	17	38108443	38108443	C	T	SNP	EZH1	NM_001991	human	genbank	54_36p	-1	validated	missense	c.2161	p.E721K	1	NULL	-	-	no_errors
BPTF	2186	genome.wustl.edu	36	17	63351149	63351150	+	Missense_Mutation	DNP	AG	AG	CC	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	AG	AG	AG	CC	AG	AG	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	17	63351149	63351150	AG	CC	DNP	BPTF	NM_182641	human	genbank	54_36p	1	reviewed	missense	c.5733_5734	p.V1912L	0.863:0.870	NULL	HMMPfam_Bromodomain;HMMPfam_PHD;HMMPfam_DDT;superfamily_FYVE/PHD zinc finger;superfamily_WD40 repeat-like;superfamily_N-terminal domain of adenylylcyclase associated protein CAP;superfamily_Bromodomain;superfamily_TPR-like	-	no_errors
CD300LB	124599	genome.wustl.edu	36	17	70039181	70039181	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	17	70039181	70039181	G	C	SNP	CD300LB	NM_174892	human	genbank	54_36p	-1	validated	missense	c.15	p.C5W		NULL	HMMPfam_V-set;superfamily_Immunoglobulin	-	no_errors
CLDN7	1366	genome.wustl.edu	36	17	7104913	7104913	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	17	7104913	7104913	C	A	SNP	CLDN7	NM_001307	human	genbank	54_36p	-1	validated	silent	c.339	p.V113	0.99	HMMPfam_PMP22_Claudin	HMMPfam_PMP22_Claudin	-	no_errors
DNAH17	8632	genome.wustl.edu	36	17	73999186	73999186	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	17	73999186	73999186	G	A	SNP	DNAH17	ENST00000300671	human	ensembl	54_36p	-1	known	silent	c.6588	p.I2196	0.993	NULL	-	-	no_errors
LGALS3BP	3959	genome.wustl.edu	36	17	74480227	74480227	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	17	74480227	74480227	C	A	SNP	LGALS3BP	NM_005567	human	genbank	54_36p	-1	reviewed	missense	c.784	p.D262Y	0.822	HMMPfam_BACK	SRCR,HMMPfam_SRCR,SRCR-like,superfamily_SRCR-like,BACK,HMMPfam_BACK,POZ domain,superfamily_POZ domain	-	no_errors
TP53	7157	genome.wustl.edu	36	17	7518990	7518990	+	Missense_Mutation	SNP	A	G	G	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	A	A	G	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	17	7518990	7518990	A	G	SNP	TP53	NM_000546	human	genbank	54_36p	-1	reviewed	missense	c.584	p.I195T	1	HMMPfam_P53	superfamily_p53-like transcription factors;superfamily_p53 tetramerization domain;P53_tetramer;HMMPfam_P53_tetramer;P53;HMMPfam_P53;P53_TAD;HMMPfam_P53_TAD	-	no_errors
GNAL	2774	genome.wustl.edu	36	18	11870995	11870995	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	18	11870995	11870995	G	C	SNP	GNAL	NM_182978	human	genbank	54_36p	1	validated	missense	c.1238	p.S413T	1	HMMPfam_G-alpha	HMMPfam_G-alpha;superfamily_Transducin (alpha subunit) insertion domain;superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
DSG2	1829	genome.wustl.edu	36	18	27370347	27370347	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	18	27370347	27370347	A	T	SNP	DSG2	NM_001943	human	genbank	54_36p	1	reviewed	missense	c.1608	p.K536N	0.96	NULL	HMMPfam_Cadherin;superfamily_Cadherin-like;superfamily_dsRNA-binding domain-like	-	no_errors
COLEC12	81035	genome.wustl.edu	36	18	336824	336824	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	18	336824	336824	C	G	SNP	COLEC12	NM_130386	human	genbank	54_36p	-1	validated	missense	c.798	p.Q266H	1	NULL	HMMPfam_Lectin_C;HMMPfam_Collagen;superfamily_C-type lectin-like	-	no_errors
ZNF516	9658	genome.wustl.edu	36	18	72220900	72220900	+	Missense_Mutation	SNP	C	G	G	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	G	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	18	72220900	72220900	C	G	SNP	ZNF516	ENST00000217537	human	ensembl	54_36p	-1	known	missense	c.2158	p.G720R		NULL	-	-	no_errors
TSHZ3	57616	genome.wustl.edu	36	19	36461226	36461226	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	19	36461226	36461226	A	G	SNP	TSHZ3	NM_020856	human	genbank	54_36p	-1	validated	missense	c.1313	p.L438P	0.98	NULL	-	-	no_errors
ZNF345	25850	genome.wustl.edu	36	19	42059828	42059828	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	19	42059828	42059828	G	A	SNP	ZNF345	NM_003419	human	genbank	54_36p	1	provisional	missense	c.256	p.G86S	1	NULL	-	-	no_errors
FCGBP	8857	genome.wustl.edu	36	19	45125384	45125384	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	19	45125384	45125384	A	G	SNP	FCGBP	NM_003890	human	genbank	54_36p	-1	validated	missense	c.725	p.L242P	1	NULL	HMMPfam_VWD;HMMPfam_TIL;superfamily_Serine proterase inhibitors;HMMPfam_TIL_assoc;superfamily_Concanavalin A-like lectins/glucanases;HMMPfam_DUF1787;superfamily_EGF/Laminin	-	no_errors
CYP2A6	1548	genome.wustl.edu	36	19	46048154	46048154	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	19	46048154	46048154	C	T	SNP	CYP2A6	NM_000762	human	genbank	54_36p	-1	reviewed	missense	c.18	p.M6I	0.06	NULL	-	-	no_errors
PSG3	5671	genome.wustl.edu	36	19	47929004	47929004	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	19	47929004	47929004	C	T	SNP	PSG3	NM_021016	human	genbank	54_36p	-1	validated	missense	c.481	p.D161N		NULL	HMMPfam_V-set;HMMPfam_ig;superfamily_Immunoglobulin	-	no_errors
ZNF45	7596	genome.wustl.edu	36	19	49114870	49114870	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	19	49114870	49114870	T	C	SNP	ZNF45	NM_003425	human	genbank	54_36p	-1	provisional	missense	c.227	p.N76S		NULL	HMMPfam_KRAB;HMMPfam_zf-C2H2;superfamily_KRAB domain (Kruppel-associated box Pfam 01352);superfamily_C2H2 and C2HC zinc fingers	-	no_errors
C5AR1	728	genome.wustl.edu	36	19	52514960	52514960	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	19	52514960	52514960	C	T	SNP	C5AR1	NM_001736	human	genbank	54_36p	1	validated	missense	c.86	p.T29I		NULL	HMMPfam_7tm_1;superfamily_Family A G protein-coupled receptor-like	-	no_errors
SIGLEC12	89858	genome.wustl.edu	36	19	56696534	56696534	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	19	56696534	56696534	G	A	SNP	SIGLEC12	NM_053003	human	genbank	54_36p	-1	reviewed	missense	c.266	p.T89I		HMMPfam_V-set	HMMPfam_V-set;HMMPfam_ig;HMMPfam_C2-set_2;superfamily_Immunoglobulin	-	no_errors
KIR2DL3	3804	genome.wustl.edu	36	19	59941855	59941855	+	Silent	SNP	T	T	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	19	59941855	59941855	T	A	SNP	KIR2DL3	NM_015868	human	genbank	54_36p	1	reviewed	silent	c.33	p.V11	0	NULL	HMMPfam_ig;superfamily_Immunoglobulin	-	no_errors
KIR2DL1	3802	genome.wustl.edu	36	19	59993361	59993361	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	19	59993361	59993361	C	G	SNP	KIR2DL1	ENST00000391730	human	ensembl	54_36p	1	known	missense	c.728	p.S243C	0.74	NULL	-	-	no_errors
MZF1	7593	genome.wustl.edu	36	19	63774194	63774194	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	19	63774194	63774194	C	T	SNP	MZF1	NM_003422	human	genbank	54_36p	-1	validated	silent	c.375	p.E125	0.32	HMMPfam_SCAN	HMMPfam_SCAN;HMMPfam_zf-C2H2;superfamily_C2H2 and C2HC zinc fingers	-	no_errors
C19orf45	374877	genome.wustl.edu	36	19	7476999	7476999	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	19	7476999	7476999	G	A	SNP	C19orf45	NM_198534	human	genbank	54_36p	1	validated	silent	c.1113	p.Q371	0	NULL	-	-	no_errors
C19orf45	374877	genome.wustl.edu	36	19	7477020	7477020	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	19	7477020	7477020	G	A	SNP	C19orf45	NM_198534	human	genbank	54_36p	1	validated	silent	c.1134	p.L378	0	NULL	-	-	no_errors
STXBP2	6813	genome.wustl.edu	36	19	7611910	7611910	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	19	7611910	7611910	G	T	SNP	STXBP2	ENST00000320400	human	ensembl	54_36p	1	known	silent	c.1011	p.L337	0.07	NULL	HMMPfam_Sec1;superfamily_Sec1/munc18-like (SM) proteins	-	no_start_codon
CCDC138	165055	genome.wustl.edu	36	2	108798892	108798892	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	2	108798892	108798892	C	G	SNP	CCDC138	NM_144978	human	genbank	54_36p	1	provisional	missense	c.1105	p.H369D	1	NULL	-	-	no_errors
FAP	2191	genome.wustl.edu	36	2	162782770	162782770	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	2	162782770	162782770	G	A	SNP	FAP	NM_004460	human	genbank	54_36p	-1	reviewed	missense	c.734	p.P245L	1	HMMPfam_DPPIV_N	HMMPfam_Peptidase_S9;HMMPfam_DPPIV_N;superfamily_alpha/beta-Hydrolases;superfamily_Dipeptidyl peptidase IV/CD26 N-terminal domain	-	no_errors
FASTKD1	79675	genome.wustl.edu	36	2	170102046	170102046	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	2	170102046	170102046	C	T	SNP	FASTKD1	NM_024622	human	genbank	54_36p	-1	validated	missense	c.2125	p.E709K	1	HMMPfam_FAST_2	HMMPfam_FAST_1;HMMPfam_FAST_2;HMMPfam_RAP	-	no_errors
PDE11A	50940	genome.wustl.edu	36	2	178202430	178202430	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	2	178202430	178202430	G	T	SNP	PDE11A	NM_016953	human	genbank	54_36p	-1	reviewed	missense	c.2753	p.A918D	0.21	NULL	HMMPfam_PDEase_I;HMMPfam_GAF;superfamily_HD-domain/PDEase-like;superfamily_GAF domain-like	-	no_errors
MSGN1	343930	genome.wustl.edu	36	2	17861525	17861525	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	2	17861525	17861525	G	A	SNP	MSGN1	NM_001105569	human	genbank	54_36p	1	inferred	missense	c.259	p.A87T		NULL	-	-	no_errors
TTN	7273	genome.wustl.edu	36	2	179133251	179133251	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	2	179133251	179133251	T	G	SNP	TTN	NM_133378	human	genbank	54_36p	-1	reviewed	missense	c.78149	p.D26050A	1	NULL	-	-	pseudogene:no_stop_codon:bad_bp_length_for_coding_region
TTN	7273	genome.wustl.edu	36	2	179205590	179205590	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	2	179205590	179205590	G	A	SNP	TTN	NM_133378	human	genbank	54_36p	-1	reviewed	missense	c.35684	p.S11895L	1	NULL	-	-	pseudogene:no_stop_codon:bad_bp_length_for_coding_region
ALS2CR8	79800	genome.wustl.edu	36	2	203515797	203515797	+	Silent	SNP	T	T	C	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	2	203515797	203515797	T	C	SNP	ALS2CR8	NM_001104586	human	genbank	54_36p	1	validated	silent	c.168	p.N56	0.02	NULL	-	-	no_errors
MAP2	4133	genome.wustl.edu	36	2	210267017	210267017	+	Silent	SNP	C	C	G	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	2	210267017	210267017	C	G	SNP	MAP2	NM_002374	human	genbank	54_36p	1	reviewed	silent	c.1878	p.S626	0.85	HMMPfam_MAP2_projctn	HMMPfam_Tubulin-binding;HMMPfam_MAP2_projctn	-	no_errors
ABCA12	26154	genome.wustl.edu	36	2	215570674	215570674	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	2	215570674	215570674	C	G	SNP	ABCA12	NM_173076	human	genbank	54_36p	-1	reviewed	missense	c.3284	p.R1095P	1	NULL	HMMPfam_ABC_tran;superfamily_Spectrin repeat;superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
SPEG	10290	genome.wustl.edu	36	2	220017706	220017706	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	2	220017706	220017706	C	T	SNP	SPEG	NM_005876	human	genbank	54_36p	1	validated	missense	c.476	p.T159M	1	NULL	-	-	no_errors
SPHKAP	80309	genome.wustl.edu	36	2	228592495	228592495	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	2	228592495	228592495	A	G	SNP	SPHKAP	NM_030623	human	genbank	54_36p	-1	validated	missense	c.1319	p.V440A		NULL	-	-	no_errors
TRIP12	9320	genome.wustl.edu	36	2	230358756	230358756	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	2	230358756	230358756	G	A	SNP	TRIP12	NM_004238	human	genbank	54_36p	-1	provisional	silent	c.4830	p.G1610	1	NULL	HMMPfam_HECT;HMMPfam_WWE;superfamily_ARM repeat;superfamily_Hect E3 ligase catalytic domain	-	no_errors
ALPP	250	genome.wustl.edu	36	2	232951766	232951766	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	2	232951766	232951766	C	T	SNP	ALPP	NM_001632	human	genbank	54_36p	1	reviewed	missense	c.10	p.P4S	0.02	NULL	HMMPfam_Alk_phosphatase;superfamily_Alkaline phosphatase-like	-	no_errors
COL6A3	1293	genome.wustl.edu	36	2	237942408	237942408	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	2	237942408	237942408	C	A	SNP	COL6A3	NM_004369	human	genbank	54_36p	-1	reviewed	missense	c.4437	p.Q1479H	1	HMMPfam_VWA	VWA;HMMPfam_VWA;Kunitz_BPTI;HMMPfam_Kunitz_BPTI;Collagen;HMMPfam_Collagen	-	no_errors
PSME4	23198	genome.wustl.edu	36	2	53975704	53975704	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	2	53975704	53975704	A	C	SNP	PSME4	NM_014614	human	genbank	54_36p	-1	validated	missense	c.3514	p.Y1172D	1	NULL	-	-	no_errors
ANTXR1	84168	genome.wustl.edu	36	2	69158056	69158056	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	2	69158056	69158056	G	A	SNP	ANTXR1	NM_032208	human	genbank	54_36p	1	reviewed	missense	c.574	p.A192T	1	NULL	-	-	no_errors
TGM3	7053	genome.wustl.edu	36	20	2268522	2268522	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	20	2268522	2268522	G	A	SNP	TGM3	NM_003245	human	genbank	54_36p	1	reviewed	missense	c.1823	p.R608Q		HMMPfam_Transglut_C	HMMPfam_Transglut_C;superfamily_Transglutaminase two C-terminal domains;superfamily_E set domains;superfamily_Cysteine proteinases;HMMPfam_Transglut_N;HMMPfam_Transglut_core	-	no_errors
NXT1	29107	genome.wustl.edu	36	20	23282730	23282730	+	Missense_Mutation	SNP	G	A	G	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	A	G	G	G	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA		dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	20	23282730	23282730	G	A	SNP	NXT1	NM_013248	human	genbank	54_36p	1	reviewed	missense	c.52	p.E18K	1	HMMPfam_NTF2	HMMPfam_NTF2;superfamily_NTF2-like	-	no_errors
NINL	22981	genome.wustl.edu	36	20	25432690	25432690	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	20	25432690	25432690	C	A	SNP	NLP	NM_025176	human	genbank	54_36p	-1	validated	silent	c.759	p.V253	1	NULL	-	-	no_errors
RBM12	10137	genome.wustl.edu	36	20	33705476	33705476	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	20	33705476	33705476	T	C	SNP	RBM12	NM_006047	human	genbank	54_36p	-1	reviewed	missense	c.1183	p.M395V	0.94	NULL	-	-	no_errors
CTNNBL1	56259	genome.wustl.edu	36	20	35904173	35904173	+	Silent	SNP	T	T	C	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	20	35904173	35904173	T	C	SNP	CTNNBL1	NM_030877	human	genbank	54_36p	1	reviewed	silent	c.1330	p.L444	0.97	NULL	-	-	no_errors
TOP1	7150	genome.wustl.edu	36	20	39139642	39139642	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	20	39139642	39139642	G	T	SNP	TOP1	NM_003286	human	genbank	54_36p	1	reviewed	missense	c.286	p.A96S	1	NULL	Topoisom_I_N;HMMPfam_Topoisom_I_N;Eukaryotic DNA topoisomerase I dispensable insert domain;superfamily_Eukaryotic DNA topoisomerase I dispensable insert domain;DNA breaking-rejoining enzymes;superfamily_DNA breaking-rejoining enzymes;Topoisom_I;HMMPfam_Topoisom_I;Eukaryotic DNA topoisomerase I N-terminal DNA-binding fragment;superfamily_Eukaryotic DNA topoisomerase I N-terminal DNA-binding fragment	-	no_errors
TPD52L2	7165	genome.wustl.edu	36	20	61977628	61977628	+	Silent	SNP	T	T	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	20	61977628	61977628	T	A	SNP	TPD52L2	NM_199360	human	genbank	54_36p	1	validated	silent	c.330	p.S110	1	HMMPfam_TPD52	HMMPfam_TPD52	-	no_errors
DIP2A	23181	genome.wustl.edu	36	21	46748734	46748734	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	21	46748734	46748734	G	A	SNP	DIP2A	NM_015151	human	genbank	54_36p	1	reviewed	missense	c.688	p.G230S	1	NULL	-	-	no_errors
DGCR14	8220	genome.wustl.edu	36	22	17507498	17507498	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	22	17507498	17507498	C	A	SNP	DGCR14	NM_022719	human	genbank	54_36p	-1	reviewed	missense	c.440	p.S147I	1	NULL	-	-	no_errors
PIWIL3	440822	genome.wustl.edu	36	22	23488369	23488369	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	22	23488369	23488369	G	C	SNP	PIWIL3	NM_001008496	human	genbank	54_36p	-1	validated	missense	c.98	p.A33G		NULL	HMMPfam_PAZ;HMMPfam_Piwi;superfamily_Ribonuclease H-like;superfamily_PAZ domain	-	no_errors
FBXO7	25793	genome.wustl.edu	36	22	31211059	31211059	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	22	31211059	31211059	C	T	SNP	FBXO7	NM_012179	human	genbank	54_36p	1	reviewed	missense	c.650	p.T217I	0.98	NULL	HMMPfam_F-box;superfamily_Ubiquitin-like;superfamily_F-box domain	-	no_errors
LOC100128853	100128853	genome.wustl.edu	36	19	23467522	23467522	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	19	23467522	23467522	C	A	SNP	LOC100128853	XM_001726893	human	genbank	54_36p	-1	model	missense	c.496	p.A166S		NULL	-	-	pseudogene
CEP63	80254	genome.wustl.edu	36	3	135738746	135738746	+	Silent	SNP	A	A	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	3	135738746	135738746	A	T	SNP	CEP63	NM_025180	human	genbank	54_36p	1	reviewed	silent	c.501	p.V167	1	NULL	-	-	no_errors
STAG1	10274	genome.wustl.edu	36	3	137550738	137550738	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	3	137550738	137550738	C	G	SNP	STAG1	NM_005862	human	genbank	54_36p	-1	reviewed	missense	c.3223	p.V1075L	1	NULL	HMMPfam_STAG;superfamily_ARM repeat	-	no_errors
LOC389168	389168	genome.wustl.edu	36	3	157188591	157188591	+	RNA	SNP	G	G	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	3	157188591	157188591	G	A	SNP	LOC389168	XR_017613	human	genbank	54_36p	1	model	rna	NULL	NULL	1	-	-	-	pseudogene
EIF2B5	8893	genome.wustl.edu	36	3	185340583	185340583	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	3	185340583	185340583	A	G	SNP	EIF2B5	NM_003907	human	genbank	54_36p	1	validated	missense	c.787	p.N263D	1	NULL	HMMPfam_Hexapep;HMMPfam_W2;superfamily_Trimeric LpxA-like enzymes;superfamily_ARM repeat;superfamily_Nucleotide-diphospho-sugar transferases	-	no_errors
LOC642892	642892	genome.wustl.edu	36	3	197747883	197747883	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	3	197747883	197747883	C	T	SNP	LOC642892	XM_001718231	human	genbank	54_36p	1	model	silent	c.84	p.H28	1	NULL	-	-	pseudogene
BHLHE40	8553	genome.wustl.edu	36	3	5000108	5000108	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	3	5000108	5000108	C	G	SNP	BHLHE40	NM_003670	human	genbank	54_36p	1	reviewed	missense	c.970	p.P324A	1	NULL	HMMPfam_HLH;HMMPfam_Hairy_orange;superfamily_HLH helix-loop-helix DNA-binding domain	-	no_errors
LOC100128525	100128525	genome.wustl.edu	36	22	38601808	38601808	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	22	38601808	38601808	G	C	SNP	LOC100128525	XM_001716642	human	genbank	54_36p	1	model	missense	c.532	p.V178L	1	NULL	-	-	pseudogene
FAT4	79633	genome.wustl.edu	36	4	126549081	126549081	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	4	126549081	126549081	G	A	SNP	FAT4	NM_024582	human	genbank	54_36p	1	validated	missense	c.5602	p.D1868N	1	NULL	-	-	no_errors
WWC2	80014	genome.wustl.edu	36	4	184403640	184403640	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	4	184403640	184403640	C	T	SNP	WWC2	NM_024949	human	genbank	54_36p	1	validated	missense	c.680	p.S227F	1	NULL	-	-	no_errors
FAM193A	8603	genome.wustl.edu	36	4	2668058	2668058	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	4	2668058	2668058	C	T	SNP	C4orf8	NM_003704	human	genbank	54_36p	1	validated	silent	c.2574	p.S858	0.13	NULL	-	-	no_errors
UBE2K	3093	genome.wustl.edu	36	4	39423776	39423780	+	Frame_Shift_Del	DEL	ACCAA	ACCAA	-	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	ACCAA	ACCAA	ACCAA	-	ACCAA	ACCAA	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	4	39423776	39423780	ACCAA	-	DEL	UBE2K	NM_005339	human	genbank	54_36p	1	reviewed	frame_shift_del	c.167_171	p.Y56fs	1.000:0.998:1.000:1.000:0.991	NULL	-	(deletion:cds_exon[39423767;39423825])	no_errors
GRXCR1	389207	genome.wustl.edu	36	4	42590045	42590045	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	4	42590045	42590045	T	A	SNP	GRXCR1	NM_001080476	human	genbank	54_36p	1	inferred	missense	c.5	p.L2H	0.89	NULL	-	-	no_errors
LPHN3	23284	genome.wustl.edu	36	4	62496566	62496566	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	4	62496566	62496566	C	G	SNP	LPHN3	NM_015236	human	genbank	54_36p	1	reviewed	missense	c.2578	p.L860V	0.99	NULL	-	-	no_errors
FRAS1	80144	genome.wustl.edu	36	4	79377709	79377709	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	4	79377709	79377709	G	A	SNP	FRAS1	ENST00000380674	human	ensembl	54_36p	1	known	missense	c.130	p.D44N	1	NULL	-	-	no_errors
PCDHA5	56143	genome.wustl.edu	36	5	140182735	140182735	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	5	140182735	140182735	G	A	SNP	PCDHA5	NM_018908	human	genbank	54_36p	1	reviewed	silent	c.1191	p.V397	0.88	NULL	-	-	no_errors
HDAC3	8841	genome.wustl.edu	36	5	140989008	140989008	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	5	140989008	140989008	C	G	SNP	HDAC3	NM_003883	human	genbank	54_36p	-1	reviewed	missense	c.526	p.G176R	1	HMMPfam_Hist_deacetyl	HMMPfam_Hist_deacetyl;superfamily_Arginase/deacetylase	-	no_errors
SPRY4	81848	genome.wustl.edu	36	5	141674769	141674769	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	5	141674769	141674769	C	A	SNP	SPRY4	NM_030964	human	genbank	54_36p	-1	validated	missense	c.158	p.R53L	1	NULL	HMMPfam_Sprouty	-	no_errors
PDGFRB	5159	genome.wustl.edu	36	5	149480685	149480685	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	5	149480685	149480685	G	C	SNP	PDGFRB	NM_002609	human	genbank	54_36p	-1	reviewed	missense	c.2545	p.R849G	1	HMMPfam_Pkinase_Tyr	Pkinase_Tyr;HMMPfam_Pkinase_Tyr;ig;HMMPfam_ig	-	no_errors
IL6ST	3572	genome.wustl.edu	36	5	55294991	55294991	+	Silent	SNP	T	T	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	5	55294991	55294991	T	A	SNP	IL6ST	NM_002184	human	genbank	54_36p	-1	reviewed	silent	c.759	p.I253		HMMPfam_fn3	HMMPfam_fn3;superfamily_Fibronectin type III;HMMPfam_Lep_receptor_Ig	-	no_errors
HEXB	3074	genome.wustl.edu	36	5	74050387	74050387	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	5	74050387	74050387	G	C	SNP	HEXB	NM_000521	human	genbank	54_36p	1	reviewed	missense	c.1252	p.G418R	0.98	HMMPfam_Glyco_hydro_20	HMMPfam_Glyco_hydro_20b;HMMPfam_Glyco_hydro_20;superfamily_(Trans)glycosidases;superfamily_beta-N-acetylhexosaminidase-like domain	-	no_errors
F2RL2	2151	genome.wustl.edu	36	5	75954796	75954796	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	5	75954796	75954796	A	C	SNP	F2RL2	NM_004101	human	genbank	54_36p	-1	reviewed	missense	c.16	p.F6V		NULL	HMMPfam_7tm_1;superfamily_Family A G protein-coupled receptor-like	-	no_errors
SIM1	6492	genome.wustl.edu	36	6	100945522	100945522	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	6	100945522	100945522	C	G	SNP	SIM1	NM_005068	human	genbank	54_36p	-1	reviewed	missense	c.1737	p.E579D	1	HMMPfam_SIM_C	HMMPfam_HLH;HMMPfam_SIM_C;superfamily_HLH helix-loop-helix DNA-binding domain;HMMPfam_PAS_3;HMMPfam_PAS;superfamily_PYP-like sensor domain (PAS domain)	-	no_errors
SYCP2L	221711	genome.wustl.edu	36	6	11006314	11006314	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	6	11006314	11006314	G	C	SNP	SYCP2L	NM_001040274	human	genbank	54_36p	1	provisional	missense	c.421	p.D141H	0.97	NULL	-	-	no_errors
FRK	2444	genome.wustl.edu	36	6	116431838	116431838	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	6	116431838	116431838	T	C	SNP	FRK	NM_002031	human	genbank	54_36p	-1	reviewed	missense	c.361	p.I121V	1	HMMPfam_SH2	SH2;HMMPfam_SH2;Pkinase_Tyr;HMMPfam_Pkinase_Tyr;SH3_1;HMMPfam_SH3_1	-	no_errors
MYB	4602	genome.wustl.edu	36	6	135563199	135563199	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	6	135563199	135563199	G	C	SNP	MYB	NM_005375	human	genbank	54_36p	1	validated	missense	c.1540	p.E514Q	0.96	HMMPfam_Cmyb_C	superfamily_Homeodomain-like;HMMPfam_Wos2;HMMPfam_Myb_DNA-binding;HMMPfam_Cmyb_C	-	no_errors
HIST1H2BO	8348	genome.wustl.edu	36	6	27969325	27969325	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	6	27969325	27969325	G	A	SNP	HIST1H2BO	NM_003527	human	genbank	54_36p	1	reviewed	missense	c.106	p.E36K	1	NULL	-	-	no_errors
PGBD1	84547	genome.wustl.edu	36	6	28377695	28377695	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	6	28377695	28377695	C	T	SNP	PGBD1	NM_032507	human	genbank	54_36p	1	reviewed	silent	c.2085	p.I695	1	NULL	-	-	no_errors
TREML2	79865	genome.wustl.edu	36	6	41276717	41276717	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	6	41276717	41276717	G	A	SNP	TREML2	NM_024807	human	genbank	54_36p	-1	validated	missense	c.185	p.P62L	0.07	NULL	-	-	no_errors
ENPP4	22875	genome.wustl.edu	36	6	46215774	46215774	+	Silent	SNP	T	T	C	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	Sanger_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	6	46215774	46215774	T	C	SNP	ENPP4	NM_014936	human	genbank	54_36p	1	validated	silent	c.495	p.N165	0.22	HMMPfam_Phosphodiest	HMMPfam_Phosphodiest;superfamily_Alkaline phosphatase-like	-	no_errors
PKHD1	5314	genome.wustl.edu	36	6	51840792	51840792	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	6	51840792	51840792	C	A	SNP	PKHD1	NM_138694	human	genbank	54_36p	-1	reviewed	missense	c.7561	p.A2521S	1	NULL	HMMPfam_TIG;superfamily_Pectin lyase-like;superfamily_E set domains;superfamily_Anthrax protective antigen	-	no_errors
PKHD1	5314	genome.wustl.edu	36	6	51990356	51990356	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA		dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	6	51990356	51990356	C	T	SNP	PKHD1	NM_138694	human	genbank	54_36p	-1	reviewed	missense	c.5411	p.R1804H		NULL	HMMPfam_TIG;superfamily_Pectin lyase-like;superfamily_E set domains;superfamily_Anthrax protective antigen	-	no_errors
HMGCLL1	54511	genome.wustl.edu	36	6	55486876	55486876	+	Silent	SNP	G	G	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	6	55486876	55486876	G	T	SNP	HMGCLL1	NM_019036	human	genbank	54_36p	-1	validated	silent	c.561	p.S187	0.99	NULL	-	-	no_errors
DST	667	genome.wustl.edu	36	6	56577184	56577184	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	6	56577184	56577184	C	T	SNP	DST	NM_020388	human	genbank	54_36p	-1	reviewed	missense	c.8590	p.E2864K		NULL	-	-	no_errors
MDN1	23195	genome.wustl.edu	36	6	90428566	90428566	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	6	90428566	90428566	A	G	SNP	MDN1	NM_014611	human	genbank	54_36p	-1	provisional	silent	c.14526	p.G4842	0.96	NULL	-	-	no_errors
LOC100130721	100130721	genome.wustl.edu	36	7	64437805	64437805	+	RNA	SNP	C	C	G	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	7	64437805	64437805	C	G	SNP	LOC100130721	XR_037257	human	genbank	54_36p	-1	model	rna	NULL	NULL	1	-	-	-	pseudogene
LOC441442	441442	genome.wustl.edu	36	9	67847665	67847665	+	RNA	SNP	G	G	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	9	67847665	67847665	G	T	SNP	LOC441442	XR_037084	human	genbank	54_36p	-1	model	rna	NULL	NULL	1	-	-	-	pseudogene
AZGP1P2	401393	genome.wustl.edu	36	7	100717601	100717601	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	7	100717601	100717601	A	G	SNP	AZGP1P2	ENST00000397935	human	ensembl	54_36p	-1	known	missense	c.220	p.W74R	0.21	NULL	-	-	no_errors
PPP1R3A	5506	genome.wustl.edu	36	7	113345820	113345820	+	Missense_Mutation	SNP	T	T	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	7	113345820	113345820	T	A	SNP	PPP1R3A	NM_002711	human	genbank	54_36p	-1	reviewed	missense	c.468	p.L156F	1	HMMPfam_CBM_21	HMMPfam_CBM_21	-	no_errors
RBM28	55131	genome.wustl.edu	36	7	127740546	127740546	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	7	127740546	127740546	T	C	SNP	RBM28	NM_018077	human	genbank	54_36p	-1	validated	missense	c.2063	p.K688R	0.98	NULL	-	-	no_errors
CHRM2	1129	genome.wustl.edu	36	7	136350196	136350196	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	7	136350196	136350196	C	G	SNP	CHRM2	NM_000739	human	genbank	54_36p	1	reviewed	missense	c.44	p.T15R	0.07	NULL	-	-	no_errors
CHRM2	1129	genome.wustl.edu	36	7	136351313	136351313	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	7	136351313	136351313	G	T	SNP	CHRM2	NM_000739	human	genbank	54_36p	1	reviewed	missense	c.1161	p.R387S	1	NULL	-	-	no_errors
IGF2BP3	10643	genome.wustl.edu	36	7	23349916	23349916	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	7	23349916	23349916	C	T	SNP	IGF2BP3	NM_006547	human	genbank	54_36p	-1	reviewed	silent	c.1023	p.E341	1	HMMPfam_KH_1	HMMPfam_RRM_1;HMMPfam_KH_1;superfamily_Eukaryotic type KH-domain (KH-domain type I);superfamily_RNA-binding domain RBD	-	no_errors
SAMD9	54809	genome.wustl.edu	36	7	92570228	92570228	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	7	92570228	92570228	C	A	SNP	SAMD9	NM_017654	human	genbank	54_36p	-1	validated	missense	c.3119	p.R1040L	0.96	NULL	-	-	no_errors
TRRAP	8295	genome.wustl.edu	36	7	98391707	98391707	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	7	98391707	98391707	G	A	SNP	TRRAP	NM_003496	human	genbank	54_36p	1	validated	silent	c.5865	p.V1955	1	NULL	HMMPfam_PI3_PI4_kinase;HMMPfam_FAT;superfamily_Protein kinase-like (PK-like);superfamily_ARM repeat;superfamily_Protein prenylyltransferase;superfamily_TPR-like;superfamily_TolA/TonB C-terminal domain	-	no_errors
ENSG00000214331	0	genome.wustl.edu	36	16	72943457	72943457	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	16	72943457	72943457	T	C	SNP	ENSG00000214331	ENST00000398122	human	ensembl	54_36p	-1	known	missense	c.586	p.S196G	1	NULL	-	-	no_stop_codon
RB1CC1	9821	genome.wustl.edu	36	8	53749201	53749201	+	Silent	SNP	A	A	C	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	8	53749201	53749201	A	C	SNP	RB1CC1	NM_014781	human	genbank	54_36p	-1	validated	silent	c.759	p.S253	0.01	NULL	superfamily_Prefoldin;superfamily_Ubiquitin-like	-	no_errors
ASPH	444	genome.wustl.edu	36	8	62718502	62718502	+	Missense_Mutation	SNP	T	T	G	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	T	T	T	G	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	8	62718502	62718502	T	G	SNP	ASPH	NM_004318	human	genbank	54_36p	-1	validated	missense	c.754	p.T252P	0.41	HMMPfam_Asp-B-Hydro_N	HMMPfam_Asp_Arg_Hydrox;HMMPfam_Asp-B-Hydro_N;superfamily_TPR-like;superfamily_Clavaminate synthase-like	-	no_errors
COL15A1	1306	genome.wustl.edu	36	9	100807102	100807102	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	9	100807102	100807102	G	A	SNP	COL15A1	NM_001855	human	genbank	54_36p	1	reviewed	silent	c.1302	p.G434		NULL	HMMPfam_Collagen;superfamily_Concanavalin A-like lectins/glucanases;HMMPfam_Endostatin;superfamily_C-type lectin-like	-	no_errors
PTPN3	5774	genome.wustl.edu	36	9	111208622	111208622	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	9	111208622	111208622	A	C	SNP	PTPN3	NM_002829	human	genbank	54_36p	-1	reviewed	missense	c.1733	p.F578C	1	HMMPfam_PDZ	HMMPfam_Y_phosphatase;HMMPfam_Band_41;HMMPfam_PDZ;superfamily_PDZ domain-like;superfamily_Second domain of FERM;superfamily_PH domain-like;superfamily_(Phosphotyrosine protein) phosphatases II;superfamily_Ubiquitin-like	-	no_errors
UGCG	7357	genome.wustl.edu	36	9	113731768	113731768	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	9	113731768	113731768	G	A	SNP	UGCG	NM_003358	human	genbank	54_36p	1	reviewed	silent	c.726	p.A242	1	NULL	HMMPfam_Glycos_transf_2;superfamily_Nucleotide-diphospho-sugar transferases	-	no_errors
OR1N2	138882	genome.wustl.edu	36	9	124355406	124355406	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	9	124355406	124355406	G	C	SNP	OR1N2	NM_001004457	human	genbank	54_36p	1	provisional	missense	c.137	p.G46A	0.43	NULL	-	-	no_errors
KRT18P13	392371	genome.wustl.edu	36	9	99501544	99501544	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	9	99501544	99501544	C	T	SNP	KRT18P13	XM_001726959	human	genbank	54_36p	1	model	missense	c.583	p.R195C	1	NULL	-	-	pseudogene:no_stop_codon:bad_bp_length_for_coding_region
PAK3	5063	genome.wustl.edu	36	X	110253133	110253133	+	Missense_Mutation	SNP	G	G	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	X	110253133	110253133	G	T	SNP	PAK3	NM_002578	human	genbank	54_36p	1	reviewed	missense	c.146	p.R49L	1	NULL	HMMPfam_PBD;HMMPfam_Pkinase;superfamily_Protein kinase-like (PK-like);superfamily_Wiscott-Aldrich syndrome protein WASP C-terminal domain	-	no_errors
ASB11	140456	genome.wustl.edu	36	X	15216001	15216001	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	X	15216001	15216001	C	G	SNP	ASB11	NM_080873	human	genbank	54_36p	-1	reviewed	missense	c.770	p.R257T	0.03	NULL	-	-	no_errors
G6PD	2539	genome.wustl.edu	36	X	153415852	153415852	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	X	153415852	153415852	G	A	SNP	G6PD	NM_000402	human	genbank	54_36p	-1	reviewed	missense	c.629	p.S210F	1	NULL	-	-	no_errors
MPP1	4354	genome.wustl.edu	36	X	153665519	153665519	+	Missense_Mutation	SNP	C	C	G	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	X	153665519	153665519	C	G	SNP	MPP1	NM_002436	human	genbank	54_36p	-1	reviewed	missense	c.843	p.K281N	1	NULL	-	-	no_errors
OTC	5009	genome.wustl.edu	36	X	38096920	38096920	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	X	38096920	38096920	A	T	SNP	OTC	NM_000531	human	genbank	54_36p	1	reviewed	missense	c.27	p.L9F	0.99	NULL	superfamily_Aspartate/ornithine carbamoyltransferase;HMMPfam_OTCace;HMMPfam_OTCace_N	-	no_errors
HEPH	9843	genome.wustl.edu	36	X	65326359	65326359	+	Missense_Mutation	SNP	C	T	T	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	T	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	X	65326359	65326359	C	T	SNP	HEPH	NM_014799	human	genbank	54_36p	1	reviewed	missense	c.116	p.A39V	1	NULL	-	-	no_errors
MAGEE1	57692	genome.wustl.edu	36	X	75566885	75566885	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	X	75566885	75566885	G	C	SNP	MAGEE1	NM_020932	human	genbank	54_36p	1	validated	missense	c.2158	p.E720Q	0.01	NULL	HMMPfam_MAGE	-	no_errors
P2RY10	27334	genome.wustl.edu	36	X	78103370	78103370	+	Missense_Mutation	SNP	C	A	A	novel	Unknown	TCGA-24-1469-01A-01W-0553-09	TCGA-24-1469-10A-01W-0553-09	C	C	A	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	990c4b9d-608d-4b85-959c-5cc12f4e10fc	9f402e49-9fea-4c93-8a21-c15909fa5d38	X	78103370	78103370	C	A	SNP	P2RY10	NM_014499	human	genbank	54_36p	1	reviewed	missense	c.697	p.Q233K	0.86	HMMPfam_7tm_1	HMMPfam_7tm_1;superfamily_Family A G protein-coupled receptor-like	-	no_errors
