Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
ARHGAP17	55114	hgsc.bcm.edu	36	16	24866326	24866328	+	In_Frame_Del	DEL	AGT	AGT	-	novel		TCGA-24-1548-01A-01W-0615-10	TCGA-24-1548-10A-01W-0615-10	AGT	AGT	.	.	.	.	Unknown	Untested	Somatic	Phase_III	WXS	none			SOLID	7de0028c-f2a6-460c-8da5-08e2b99c6b42	b6aa96a1-b0cf-4342-b876-b07fddf0db8a
CHST15	51363	hgsc.bcm.edu	36	10	125770782	125770784	+	In_Frame_Del	DEL	TGT	TGT	-	novel		TCGA-24-1548-01A-01W-0615-10	TCGA-24-1548-10A-01W-0615-10	TGT	TGT	.	.	.	.	Unknown	Untested	Somatic	Phase_III	WXS	none			SOLID	7de0028c-f2a6-460c-8da5-08e2b99c6b42	b6aa96a1-b0cf-4342-b876-b07fddf0db8a
HTATSF1	27336	hgsc.bcm.edu	36	X	135420003	135420003	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-24-1548-01A-01W-0615-10	TCGA-24-1548-10A-01W-0615-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_III	WXS	none			SOLID	7de0028c-f2a6-460c-8da5-08e2b99c6b42	b6aa96a1-b0cf-4342-b876-b07fddf0db8a
ITIH5	80760	hgsc.bcm.edu	36	10	7658975	7658975	+	Nonsense_Mutation	SNP	G	G	C	novel		TCGA-24-1548-01A-01W-0615-10	TCGA-24-1548-10A-01W-0615-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_III	WXS	none			SOLID	7de0028c-f2a6-460c-8da5-08e2b99c6b42	b6aa96a1-b0cf-4342-b876-b07fddf0db8a
NPAS4	266743	hgsc.bcm.edu	36	11	65948061	65948063	+	In_Frame_Del	DEL	TCC	TCC	-	novel		TCGA-24-1548-01A-01W-0615-10	TCGA-24-1548-10A-01W-0615-10	TCC	TCC	.	.	.	.	Unknown	Untested	Somatic	Phase_III	WXS	none			SOLID	7de0028c-f2a6-460c-8da5-08e2b99c6b42	b6aa96a1-b0cf-4342-b876-b07fddf0db8a
OR10H1	26539	hgsc.bcm.edu	36	19	15779201	15779201	+	Missense_Mutation	SNP	A	A	G	rs61745520		TCGA-24-1548-01A-01W-0615-10	TCGA-24-1548-10A-01W-0615-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_III	WXS	none			SOLID	7de0028c-f2a6-460c-8da5-08e2b99c6b42	b6aa96a1-b0cf-4342-b876-b07fddf0db8a
PABPC3	5042	hgsc.bcm.edu	36	13	24569333	24569333	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-24-1548-01A-01W-0615-10	TCGA-24-1548-10A-01W-0615-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_III	WXS	none			SOLID	7de0028c-f2a6-460c-8da5-08e2b99c6b42	b6aa96a1-b0cf-4342-b876-b07fddf0db8a
RTP1	132112	hgsc.bcm.edu	36	3	188400128	188400128	+	Missense_Mutation	SNP	T	C	C	novel		TCGA-24-1548-01A-01W-0615-10	TCGA-24-1548-10A-01W-0615-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_III	WXS	none			SOLID	7de0028c-f2a6-460c-8da5-08e2b99c6b42	b6aa96a1-b0cf-4342-b876-b07fddf0db8a
TP53	7157	hgsc.bcm.edu	36	17	7518915	7518915	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-24-1548-01A-01W-0615-10	TCGA-24-1548-10A-01W-0615-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_III	WXS	none			SOLID	7de0028c-f2a6-460c-8da5-08e2b99c6b42	b6aa96a1-b0cf-4342-b876-b07fddf0db8a
ZNF45	7596	hgsc.bcm.edu	36	19	49109815	49109815	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-24-1548-01A-01W-0615-10	TCGA-24-1548-10A-01W-0615-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_III	WXS	none			SOLID	7de0028c-f2a6-460c-8da5-08e2b99c6b42	b6aa96a1-b0cf-4342-b876-b07fddf0db8a
C19orf57	79173	hgsc.bcm.edu	36	19	13862101	13862101	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-24-1548-01A-01W-0615-10	TCGA-24-1548-10A-01W-0615-10	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	7de0028c-f2a6-460c-8da5-08e2b99c6b42	b6aa96a1-b0cf-4342-b876-b07fddf0db8a
DUOX1	53905	hgsc.bcm.edu	36	15	43223678	43223678	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-24-1548-01A-01W-0615-10	TCGA-24-1548-10A-01W-0615-10	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	7de0028c-f2a6-460c-8da5-08e2b99c6b42	b6aa96a1-b0cf-4342-b876-b07fddf0db8a
FBXO24	26261	hgsc.bcm.edu	36	7	100028389	100028389	+	Silent	SNP	C	C	T	novel		TCGA-24-1548-01A-01W-0615-10	TCGA-24-1548-10A-01W-0615-10	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	7de0028c-f2a6-460c-8da5-08e2b99c6b42	b6aa96a1-b0cf-4342-b876-b07fddf0db8a
FCRL6	343413	hgsc.bcm.edu	36	1	158045941	158045941	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-24-1548-01A-01W-0615-10	TCGA-24-1548-10A-01W-0615-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	7de0028c-f2a6-460c-8da5-08e2b99c6b42	b6aa96a1-b0cf-4342-b876-b07fddf0db8a
GABRG1	2565	hgsc.bcm.edu	36	4	45748339	45748339	+	Silent	SNP	C	C	T	novel		TCGA-24-1548-01A-01W-0615-10	TCGA-24-1548-10A-01W-0615-10	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	7de0028c-f2a6-460c-8da5-08e2b99c6b42	b6aa96a1-b0cf-4342-b876-b07fddf0db8a
PAH	5053	hgsc.bcm.edu	36	12	101761622	101761622	+	Silent	SNP	G	G	A	novel		TCGA-24-1548-01A-01W-0615-10	TCGA-24-1548-10A-01W-0615-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	7de0028c-f2a6-460c-8da5-08e2b99c6b42	b6aa96a1-b0cf-4342-b876-b07fddf0db8a
SPHKAP	80309	hgsc.bcm.edu	36	2	228594672	228594672	+	Silent	SNP	G	G	A	novel		TCGA-24-1548-01A-01W-0615-10	TCGA-24-1548-10A-01W-0615-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	7de0028c-f2a6-460c-8da5-08e2b99c6b42	b6aa96a1-b0cf-4342-b876-b07fddf0db8a
UBR4	23352	hgsc.bcm.edu	36	1	19326770	19326770	+	Silent	SNP	T	T	G	novel		TCGA-24-1548-01A-01W-0615-10	TCGA-24-1548-10A-01W-0615-10	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	7de0028c-f2a6-460c-8da5-08e2b99c6b42	b6aa96a1-b0cf-4342-b876-b07fddf0db8a
XYLT1	64131	hgsc.bcm.edu	36	16	17160197	17160197	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-24-1548-01A-01W-0615-10	TCGA-24-1548-10A-01W-0615-10	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	7de0028c-f2a6-460c-8da5-08e2b99c6b42	b6aa96a1-b0cf-4342-b876-b07fddf0db8a
ZNF518B	85460	hgsc.bcm.edu	36	4	10055182	10055182	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-24-1548-01A-01W-0615-10	TCGA-24-1548-10A-01W-0615-10	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	7de0028c-f2a6-460c-8da5-08e2b99c6b42	b6aa96a1-b0cf-4342-b876-b07fddf0db8a
C1orf173	127254	hgsc.bcm.edu	36	1	74810975	74810975	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-24-1548-01A-01W-0615-10	TCGA-24-1548-10A-01W-0615-10	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	7de0028c-f2a6-460c-8da5-08e2b99c6b42	b6aa96a1-b0cf-4342-b876-b07fddf0db8a
CUBN	8029	hgsc.bcm.edu	36	10	17032057	17032057	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-24-1548-01A-01W-0615-10	TCGA-24-1548-10A-01W-0615-10	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	7de0028c-f2a6-460c-8da5-08e2b99c6b42	b6aa96a1-b0cf-4342-b876-b07fddf0db8a
F8	2157	hgsc.bcm.edu	36	X	153838448	153838448	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-24-1548-01A-01W-0615-10	TCGA-24-1548-10A-01W-0615-10	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	7de0028c-f2a6-460c-8da5-08e2b99c6b42	b6aa96a1-b0cf-4342-b876-b07fddf0db8a
GUCY1A3	2982	hgsc.bcm.edu	36	4	156851177	156851177	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-24-1548-01A-01W-0615-10	TCGA-24-1548-10A-01W-0615-10	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	7de0028c-f2a6-460c-8da5-08e2b99c6b42	b6aa96a1-b0cf-4342-b876-b07fddf0db8a
KIAA2022	340533	hgsc.bcm.edu	36	X	73879897	73879897	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-24-1548-01A-01W-0615-10	TCGA-24-1548-10A-01W-0615-10	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	7de0028c-f2a6-460c-8da5-08e2b99c6b42	b6aa96a1-b0cf-4342-b876-b07fddf0db8a
LAMA1	284217	hgsc.bcm.edu	36	18	6989480	6989480	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-24-1548-01A-01W-0615-10	TCGA-24-1548-10A-01W-0615-10	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	7de0028c-f2a6-460c-8da5-08e2b99c6b42	b6aa96a1-b0cf-4342-b876-b07fddf0db8a
LRP1B	53353	hgsc.bcm.edu	36	2	141494100	141494100	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-24-1548-01A-01W-0615-10	TCGA-24-1548-10A-01W-0615-10	T	T	G	G	T	T	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	7de0028c-f2a6-460c-8da5-08e2b99c6b42	b6aa96a1-b0cf-4342-b876-b07fddf0db8a
MAP2K4	6416	hgsc.bcm.edu	36	17	11925507	11925507	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-24-1548-01A-01W-0615-10	TCGA-24-1548-10A-01W-0615-10	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	7de0028c-f2a6-460c-8da5-08e2b99c6b42	b6aa96a1-b0cf-4342-b876-b07fddf0db8a
PPP2R1A	5518	hgsc.bcm.edu	36	19	57408146	57408146	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-24-1548-01A-01W-0615-10	TCGA-24-1548-10A-01W-0615-10	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	7de0028c-f2a6-460c-8da5-08e2b99c6b42	b6aa96a1-b0cf-4342-b876-b07fddf0db8a
RGS7	6000	hgsc.bcm.edu	36	1	239328667	239328667	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-24-1548-01A-01W-0615-10	TCGA-24-1548-10A-01W-0615-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	7de0028c-f2a6-460c-8da5-08e2b99c6b42	b6aa96a1-b0cf-4342-b876-b07fddf0db8a
USH2A	7399	hgsc.bcm.edu	36	1	213968096	213968096	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-24-1548-01A-01W-0615-10	TCGA-24-1548-10A-01W-0615-10	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	7de0028c-f2a6-460c-8da5-08e2b99c6b42	b6aa96a1-b0cf-4342-b876-b07fddf0db8a
