Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
C1orf43	25912	hgsc.bcm.edu	36	1	152451668	152451668	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-24-1558-01A-01W-0615-10	TCGA-24-1558-10A-01W-0615-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_III	WXS	none			SOLID	2e06de96-fd7c-4630-b8f8-a77bf08b624e	6eb8ac17-31b7-4902-9ef5-9f4da477856c
NOMO2	283820	hgsc.bcm.edu	36	16	18427994	18427994	+	Silent	SNP	A	A	G	rs8921		TCGA-24-1558-01A-01W-0615-10	TCGA-24-1558-10A-01W-0615-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_III	WXS	none			SOLID	2e06de96-fd7c-4630-b8f8-a77bf08b624e	6eb8ac17-31b7-4902-9ef5-9f4da477856c
NOMO2	283820	hgsc.bcm.edu	36	16	18436033	18436033	+	Silent	SNP	G	G	T	rs393246		TCGA-24-1558-01A-01W-0615-10	TCGA-24-1558-10A-01W-0615-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_III	WXS	none			SOLID	2e06de96-fd7c-4630-b8f8-a77bf08b624e	6eb8ac17-31b7-4902-9ef5-9f4da477856c
NOMO2	283820	hgsc.bcm.edu	36	16	18457472	18457472	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-24-1558-01A-01W-0615-10	TCGA-24-1558-10A-01W-0615-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_III	WXS	none			SOLID	2e06de96-fd7c-4630-b8f8-a77bf08b624e	6eb8ac17-31b7-4902-9ef5-9f4da477856c
NUP210	23225	hgsc.bcm.edu	36	3	13339842	13339842	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-24-1558-01A-01W-0615-10	TCGA-24-1558-10A-01W-0615-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_III	WXS	none			SOLID	2e06de96-fd7c-4630-b8f8-a77bf08b624e	6eb8ac17-31b7-4902-9ef5-9f4da477856c
SLC4A7	9497	hgsc.bcm.edu	36	3	27465245	27465245	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-24-1558-01A-01W-0615-10	TCGA-24-1558-10A-01W-0615-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_III	WXS	none			SOLID	2e06de96-fd7c-4630-b8f8-a77bf08b624e	6eb8ac17-31b7-4902-9ef5-9f4da477856c
TDG	6996	hgsc.bcm.edu	36	12	102897858	102897859	+	Frame_Shift_Ins	INS	-	-	A	novel		TCGA-24-1558-01A-01W-0615-10	TCGA-24-1558-10A-01W-0615-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_III	WXS	none			SOLID	2e06de96-fd7c-4630-b8f8-a77bf08b624e	6eb8ac17-31b7-4902-9ef5-9f4da477856c
ADAMTSL3	57188	hgsc.bcm.edu	36	15	82442585	82442585	+	Silent	SNP	A	A	T	novel		TCGA-24-1558-01A-01W-0615-10	TCGA-24-1558-10A-01W-0615-10	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	2e06de96-fd7c-4630-b8f8-a77bf08b624e	6eb8ac17-31b7-4902-9ef5-9f4da477856c
HIST1H4E	8367	hgsc.bcm.edu	36	6	26313049	26313049	+	Silent	SNP	G	G	C	novel		TCGA-24-1558-01A-01W-0615-10	TCGA-24-1558-10A-01W-0615-10	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	2e06de96-fd7c-4630-b8f8-a77bf08b624e	6eb8ac17-31b7-4902-9ef5-9f4da477856c
IL19	29949	hgsc.bcm.edu	36	1	205082537	205082537	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-24-1558-01A-01W-0615-10	TCGA-24-1558-10A-01W-0615-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	2e06de96-fd7c-4630-b8f8-a77bf08b624e	6eb8ac17-31b7-4902-9ef5-9f4da477856c
LRRC27	80313	hgsc.bcm.edu	36	10	134025046	134025046	+	Silent	SNP	G	G	A	novel		TCGA-24-1558-01A-01W-0615-10	TCGA-24-1558-10A-01W-0615-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	2e06de96-fd7c-4630-b8f8-a77bf08b624e	6eb8ac17-31b7-4902-9ef5-9f4da477856c
MUC15	143662	hgsc.bcm.edu	36	11	26541255	26541255	+	Silent	SNP	G	G	A	novel		TCGA-24-1558-01A-01W-0615-10	TCGA-24-1558-10A-01W-0615-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	2e06de96-fd7c-4630-b8f8-a77bf08b624e	6eb8ac17-31b7-4902-9ef5-9f4da477856c
NDST2	8509	hgsc.bcm.edu	36	10	75233701	75233701	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-24-1558-01A-01W-0615-10	TCGA-24-1558-10A-01W-0615-10	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	2e06de96-fd7c-4630-b8f8-a77bf08b624e	6eb8ac17-31b7-4902-9ef5-9f4da477856c
OR5B2	390190	hgsc.bcm.edu	36	11	57946569	57946569	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-24-1558-01A-01W-0615-10	TCGA-24-1558-10A-01W-0615-10	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	2e06de96-fd7c-4630-b8f8-a77bf08b624e	6eb8ac17-31b7-4902-9ef5-9f4da477856c
PRRX1	5396	hgsc.bcm.edu	36	1	168962105	168962105	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-24-1558-01A-01W-0615-10	TCGA-24-1558-10A-01W-0615-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	2e06de96-fd7c-4630-b8f8-a77bf08b624e	6eb8ac17-31b7-4902-9ef5-9f4da477856c
SLCO1C1	53919	hgsc.bcm.edu	36	12	20759467	20759467	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-24-1558-01A-01W-0615-10	TCGA-24-1558-10A-01W-0615-10	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	2e06de96-fd7c-4630-b8f8-a77bf08b624e	6eb8ac17-31b7-4902-9ef5-9f4da477856c
TKT	7086	hgsc.bcm.edu	36	3	53238390	53238390	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-24-1558-01A-01W-0615-10	TCGA-24-1558-10A-01W-0615-10	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	2e06de96-fd7c-4630-b8f8-a77bf08b624e	6eb8ac17-31b7-4902-9ef5-9f4da477856c
TP53	7157	hgsc.bcm.edu	36	17	7517845	7517845	+	Missense_Mutation	SNP	C	C	T	rs28934576		TCGA-24-1558-01A-01W-0615-10	TCGA-24-1558-10A-01W-0615-10	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	2e06de96-fd7c-4630-b8f8-a77bf08b624e	6eb8ac17-31b7-4902-9ef5-9f4da477856c
GABBR2	9568	hgsc.bcm.edu	36	9	100256286	100256288	+	In_Frame_Del	DEL	TTG	TTG	-	novel		TCGA-24-1558-01A-01W-0615-10	TCGA-24-1558-10A-01W-0615-10	TTG	TTG	TTG	-	TTG	TTG	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	2e06de96-fd7c-4630-b8f8-a77bf08b624e	6eb8ac17-31b7-4902-9ef5-9f4da477856c
GLI3	2737	hgsc.bcm.edu	36	7	42031491	42031491	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-24-1558-01A-01W-0615-10	TCGA-24-1558-10A-01W-0615-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	2e06de96-fd7c-4630-b8f8-a77bf08b624e	6eb8ac17-31b7-4902-9ef5-9f4da477856c
MYH4	4622	hgsc.bcm.edu	36	17	10298821	10298821	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-24-1558-01A-01W-0615-10	TCGA-24-1558-10A-01W-0615-10	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	2e06de96-fd7c-4630-b8f8-a77bf08b624e	6eb8ac17-31b7-4902-9ef5-9f4da477856c
MYO1A	4640	hgsc.bcm.edu	36	12	55717073	55717073	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-24-1558-01A-01W-0615-10	TCGA-24-1558-10A-01W-0615-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	2e06de96-fd7c-4630-b8f8-a77bf08b624e	6eb8ac17-31b7-4902-9ef5-9f4da477856c
NOTCH2	4853	hgsc.bcm.edu	36	1	120262689	120262689	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-24-1558-01A-01W-0615-10	TCGA-24-1558-10A-01W-0615-10	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	2e06de96-fd7c-4630-b8f8-a77bf08b624e	6eb8ac17-31b7-4902-9ef5-9f4da477856c
NTRK1	4914	hgsc.bcm.edu	36	1	155118005	155118005	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-24-1558-01A-01W-0615-10	TCGA-24-1558-10A-01W-0615-10	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	2e06de96-fd7c-4630-b8f8-a77bf08b624e	6eb8ac17-31b7-4902-9ef5-9f4da477856c
NTRK3	4916	hgsc.bcm.edu	36	15	86224606	86224606	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-24-1558-01A-01W-0615-10	TCGA-24-1558-10A-01W-0615-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	2e06de96-fd7c-4630-b8f8-a77bf08b624e	6eb8ac17-31b7-4902-9ef5-9f4da477856c
SMARCA2	6595	hgsc.bcm.edu	36	9	2044620	2044620	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-24-1558-01A-01W-0615-10	TCGA-24-1558-10A-01W-0615-10	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	2e06de96-fd7c-4630-b8f8-a77bf08b624e	6eb8ac17-31b7-4902-9ef5-9f4da477856c
