Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
ABR	29	hgsc.bcm.edu	36	17	856123	856124	+	Frame_Shift_Ins	INS	-	-	G	novel		TCGA-24-1560-01A-01W-0615-10	TCGA-24-1560-10A-01W-0615-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_III	WXS	none			SOLID	3f3c8d7b-46f3-491c-9c1b-8f57ed028add	4a10ff75-f7d4-466b-bc81-c3b72df5cef9
AGBL5	60509	hgsc.bcm.edu	36	2	27129391	27129391	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-24-1560-01A-01W-0615-10	TCGA-24-1560-10A-01W-0615-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_III	WXS	none			SOLID	3f3c8d7b-46f3-491c-9c1b-8f57ed028add	4a10ff75-f7d4-466b-bc81-c3b72df5cef9
AMOT	154796	hgsc.bcm.edu	36	X	111910973	111910973	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-24-1560-01A-01W-0615-10	TCGA-24-1560-10A-01W-0615-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_III	WXS	none			SOLID	3f3c8d7b-46f3-491c-9c1b-8f57ed028add	4a10ff75-f7d4-466b-bc81-c3b72df5cef9
BACH2	60468	hgsc.bcm.edu	36	6	90775173	90775173	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-24-1560-01A-01W-0615-10	TCGA-24-1560-10A-01W-0615-10	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	3f3c8d7b-46f3-491c-9c1b-8f57ed028add	4a10ff75-f7d4-466b-bc81-c3b72df5cef9
DDX54	79039	hgsc.bcm.edu	36	12	112085228	112085228	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-24-1560-01A-01W-0615-10	TCGA-24-1560-10A-01W-0615-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_III	WXS	none			SOLID	3f3c8d7b-46f3-491c-9c1b-8f57ed028add	4a10ff75-f7d4-466b-bc81-c3b72df5cef9
FLG	2312	hgsc.bcm.edu	36	1	150553011	150553011	+	Silent	SNP	C	C	T	novel		TCGA-24-1560-01A-01W-0615-10	TCGA-24-1560-10A-01W-0615-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_III	WXS	none			SOLID	3f3c8d7b-46f3-491c-9c1b-8f57ed028add	4a10ff75-f7d4-466b-bc81-c3b72df5cef9
ITGA2B	3674	hgsc.bcm.edu	36	17	39808977	39808977	+	Splice_Site	SNP	A	A	T	novel		TCGA-24-1560-01A-01W-0615-10	TCGA-24-1560-10A-01W-0615-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_III	WXS	none			SOLID	3f3c8d7b-46f3-491c-9c1b-8f57ed028add	4a10ff75-f7d4-466b-bc81-c3b72df5cef9
NUP210	23225	hgsc.bcm.edu	36	3	13334231	13334231	+	Nonsense_Mutation	SNP	T	T	A	novel		TCGA-24-1560-01A-01W-0615-10	TCGA-24-1560-10A-01W-0615-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_III	WXS	none			SOLID	3f3c8d7b-46f3-491c-9c1b-8f57ed028add	4a10ff75-f7d4-466b-bc81-c3b72df5cef9
RHBDF2	79651	hgsc.bcm.edu	36	17	71980731	71980731	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-24-1560-01A-01W-0615-10	TCGA-24-1560-10A-01W-0615-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_III	WXS	none			SOLID	3f3c8d7b-46f3-491c-9c1b-8f57ed028add	4a10ff75-f7d4-466b-bc81-c3b72df5cef9
STAT6	6778	hgsc.bcm.edu	36	12	55782944	55782944	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-24-1560-01A-01W-0615-10	TCGA-24-1560-10A-01W-0615-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_III	WXS	none			SOLID	3f3c8d7b-46f3-491c-9c1b-8f57ed028add	4a10ff75-f7d4-466b-bc81-c3b72df5cef9
THBS3	7059	hgsc.bcm.edu	36	1	153434495	153434495	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-24-1560-01A-01W-0615-10	TCGA-24-1560-10A-01W-0615-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_III	WXS	none			SOLID	3f3c8d7b-46f3-491c-9c1b-8f57ed028add	4a10ff75-f7d4-466b-bc81-c3b72df5cef9
ATP9B	374868	hgsc.bcm.edu	36	18	75198300	75198300	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-24-1560-01A-01W-0615-10	TCGA-24-1560-10A-01W-0615-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	3f3c8d7b-46f3-491c-9c1b-8f57ed028add	4a10ff75-f7d4-466b-bc81-c3b72df5cef9
FRS3	10817	hgsc.bcm.edu	36	6	41848652	41848652	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-24-1560-01A-01W-0615-10	TCGA-24-1560-10A-01W-0615-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	3f3c8d7b-46f3-491c-9c1b-8f57ed028add	4a10ff75-f7d4-466b-bc81-c3b72df5cef9
KIAA1967	57805	hgsc.bcm.edu	36	8	22531809	22531809	+	Silent	SNP	C	C	G	novel		TCGA-24-1560-01A-01W-0615-10	TCGA-24-1560-10A-01W-0615-10	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	3f3c8d7b-46f3-491c-9c1b-8f57ed028add	4a10ff75-f7d4-466b-bc81-c3b72df5cef9
NLRP8	126205	hgsc.bcm.edu	36	19	61158007	61158007	+	Silent	SNP	C	C	T	novel		TCGA-24-1560-01A-01W-0615-10	TCGA-24-1560-10A-01W-0615-10	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	3f3c8d7b-46f3-491c-9c1b-8f57ed028add	4a10ff75-f7d4-466b-bc81-c3b72df5cef9
PCDH21	92211	hgsc.bcm.edu	36	10	85962922	85962922	+	Silent	SNP	G	G	A	novel		TCGA-24-1560-01A-01W-0615-10	TCGA-24-1560-10A-01W-0615-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	3f3c8d7b-46f3-491c-9c1b-8f57ed028add	4a10ff75-f7d4-466b-bc81-c3b72df5cef9
PCDHB15	56121	hgsc.bcm.edu	36	5	140606488	140606488	+	Silent	SNP	G	G	A	novel		TCGA-24-1560-01A-01W-0615-10	TCGA-24-1560-10A-01W-0615-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	3f3c8d7b-46f3-491c-9c1b-8f57ed028add	4a10ff75-f7d4-466b-bc81-c3b72df5cef9
PHF12	57649	hgsc.bcm.edu	36	17	24268578	24268578	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-24-1560-01A-01W-0615-10	TCGA-24-1560-10A-01W-0615-10	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	3f3c8d7b-46f3-491c-9c1b-8f57ed028add	4a10ff75-f7d4-466b-bc81-c3b72df5cef9
PRDM14	63978	hgsc.bcm.edu	36	8	71130158	71130158	+	Silent	SNP	A	A	G	novel		TCGA-24-1560-01A-01W-0615-10	TCGA-24-1560-10A-01W-0615-10	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	3f3c8d7b-46f3-491c-9c1b-8f57ed028add	4a10ff75-f7d4-466b-bc81-c3b72df5cef9
RBBP6	5930	hgsc.bcm.edu	36	16	24485992	24485992	+	Silent	SNP	C	C	T	novel		TCGA-24-1560-01A-01W-0615-10	TCGA-24-1560-10A-01W-0615-10	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	3f3c8d7b-46f3-491c-9c1b-8f57ed028add	4a10ff75-f7d4-466b-bc81-c3b72df5cef9
WRNIP1	56897	hgsc.bcm.edu	36	6	2729565	2729565	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-24-1560-01A-01W-0615-10	TCGA-24-1560-10A-01W-0615-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	3f3c8d7b-46f3-491c-9c1b-8f57ed028add	4a10ff75-f7d4-466b-bc81-c3b72df5cef9
GABRA6	2559	hgsc.bcm.edu	36	5	161049331	161049331	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-24-1560-01A-01W-0615-10	TCGA-24-1560-10A-01W-0615-10	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	3f3c8d7b-46f3-491c-9c1b-8f57ed028add	4a10ff75-f7d4-466b-bc81-c3b72df5cef9
LRRC47	57470	hgsc.bcm.edu	36	1	3687595	3687595	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-24-1560-01A-01W-0615-10	TCGA-24-1560-10A-01W-0615-10	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	3f3c8d7b-46f3-491c-9c1b-8f57ed028add	4a10ff75-f7d4-466b-bc81-c3b72df5cef9
MGAT4C	25834	hgsc.bcm.edu	36	12	84897953	84897953	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-24-1560-01A-01W-0615-10	TCGA-24-1560-10A-01W-0615-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	3f3c8d7b-46f3-491c-9c1b-8f57ed028add	4a10ff75-f7d4-466b-bc81-c3b72df5cef9
NLRC4	58484	hgsc.bcm.edu	36	2	32329080	32329080	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-24-1560-01A-01W-0615-10	TCGA-24-1560-10A-01W-0615-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	3f3c8d7b-46f3-491c-9c1b-8f57ed028add	4a10ff75-f7d4-466b-bc81-c3b72df5cef9
NRBP1	29959	hgsc.bcm.edu	36	2	27516209	27516209	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-24-1560-01A-01W-0615-10	TCGA-24-1560-10A-01W-0615-10	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	3f3c8d7b-46f3-491c-9c1b-8f57ed028add	4a10ff75-f7d4-466b-bc81-c3b72df5cef9
ROR2	4920	hgsc.bcm.edu	36	9	93526081	93526081	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-24-1560-01A-01W-0615-10	TCGA-24-1560-10A-01W-0615-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	3f3c8d7b-46f3-491c-9c1b-8f57ed028add	4a10ff75-f7d4-466b-bc81-c3b72df5cef9
SLC6A5	9152	hgsc.bcm.edu	36	11	20582513	20582513	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-24-1560-01A-01W-0615-10	TCGA-24-1560-10A-01W-0615-10	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	3f3c8d7b-46f3-491c-9c1b-8f57ed028add	4a10ff75-f7d4-466b-bc81-c3b72df5cef9
TP53	7157	hgsc.bcm.edu	36	17	7518276	7518276	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-24-1560-01A-01W-0615-10	TCGA-24-1560-10A-01W-0615-10	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	3f3c8d7b-46f3-491c-9c1b-8f57ed028add	4a10ff75-f7d4-466b-bc81-c3b72df5cef9
