Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error
ATAD3C	219293	genome.wustl.edu	36	1	1381129	1381129	+	Silent	SNP	A	A	G	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	1	1381129	1381129	A	G	SNP	ATAD3C	ENST00000378774	human	ensembl	54_36p	+1	known	silent	c.534	p.P178	0.966	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA	-	no_errors
KIAA0020	9933	genome.wustl.edu	36	9	2818779	2818779	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	9	2818779	2818779	C	A	SNP	KIAA0020	NM_014878	human	genbank	54_36p	-1	validated	splice_site	c.853-1	e8-1	1.000	-	-	-	no_errors
LONP1	9361	genome.wustl.edu	36	19	5664214	5664214	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	19	5664214	5664214	G	A	SNP	LONP1	NM_004793	human	genbank	54_36p	-1	reviewed	missense	c.569	p.T190M	0.998	HMMPfam_LON,HMMSmart_LON	HMMPfam_LON,HMMSmart_LON,superfamily_SSF52540,HMMSmart_AAA,HMMPfam_AAA,HMMPfam_Lon_C,superfamily_Ribosomal_S5_D2-typ_fold,PatternScan_LON_SER	-	no_errors
TBC1D14	57533	genome.wustl.edu	36	4	7020005	7020005	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	4	7020005	7020005	G	A	SNP	TBC1D14	NM_020773	human	genbank	54_36p	+1	validated	missense	c.751	p.A251T	0.624	NULL	superfamily_Ypt/Rab-GAP domain of gyp1p,HMMSmart_SM00164,HMMPfam_TBC	-	no_errors
TP53	7157	genome.wustl.edu	36	17	7519129	7519129	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	17	7519129	7519129	A	T	SNP	TP53	NM_000546	human	genbank	54_36p	-1	reviewed	missense	c.526	p.C176S	1.000	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors
PLCB1	23236	genome.wustl.edu	36	20	8730734	8730734	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	20	8730734	8730734	C	G	SNP	PLCB1	NM_182734	human	genbank	54_36p	+1	reviewed	missense	c.3455	p.T1152S	1.000	HMMPfam_PLC-beta_C	superfamily_EF-hand,HMMPfam_efhand_like,HMMSmart_SM00148,HMMPfam_PI-PLC-X,superfamily_PLC-like phosphodiesterases,HMMPfam_PI-PLC-Y,HMMSmart_SM00149,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2,HMMPfam_PLC-beta_C	-	no_errors
A2ML1	144568	genome.wustl.edu	36	12	8913026	8913026	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	12	8913026	8913026	T	C	SNP	A2ML1	NM_144670	human	genbank	54_36p	+1	validated	missense	c.4181	p.V1394A	0.999	superfamily_Alpha-macroglobulin receptor domain,HMMPfam_A2M_recep	HMMPfam_A2M_N,HMMPfam_A2M_N_2,HMMPfam_A2M,superfamily_Terpenoid cyclases/Protein prenyltransferases,HMMPfam_Thiol-ester_cl,PatternScan_ALPHA_2_MACROGLOBULIN,HMMPfam_A2M_comp,superfamily_Alpha-macroglobulin receptor domain,HMMPfam_A2M_recep	-	no_errors
KLRG1	10219	genome.wustl.edu	36	12	9052875	9052875	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	12	9052875	9052875	G	T	SNP	KLRG1	NM_005810	human	genbank	54_36p	+1	reviewed	missense	c.395	p.W132L	0.852	superfamily_C-type lectin-like,HMMSmart_SM00034,HMMPfam_Lectin_C	superfamily_C-type lectin-like,HMMSmart_SM00034,HMMPfam_Lectin_C	-	no_errors
MYH8	4626	genome.wustl.edu	36	17	10234537	10234537	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	17	10234537	10234537	C	G	SNP	MYH8	NM_002472	human	genbank	54_36p	-1	validated	missense	c.5773	p.V1925L	1.000	HMMPfam_Myosin_tail_1	HMMPfam_Myosin_N,superfamily_SSF52540,HMMSmart_MYSc,HMMPfam_Myosin_head,HMMSmart_IQ,HMMPfam_IQ,HMMPfam_Myosin_tail_1	-	no_errors
ATP2B2	491	genome.wustl.edu	36	3	10392120	10392120	+	Silent	SNP	C	C	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	3	10392120	10392120	C	T	SNP	ATP2B2	NM_001001331	human	genbank	54_36p	-1	reviewed	silent	c.1410	p.S470	0.704	superfamily_Calcium ATPase transmembrane domain M,HMMPfam_E1-E2_ATPase	HMMPfam_Cation_ATPase_N,superfamily_Calcium ATPase transmembrane domain M,HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A,HMMPfam_Hydrolase,superfamily_HAD-like,PatternScan_ATPASE_E1_E2,superfamily_Metal cation-transporting ATPase ATP-binding domain N,HMMPfam_Cation_ATPase_C	-	no_errors
IMPA2	3613	genome.wustl.edu	36	18	12018084	12018084	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	18	12018084	12018084	G	T	SNP	IMPA2	NM_014214	human	genbank	54_36p	+1	validated	missense	c.533	p.R178L	0.890	HMMPfam_Inositol_P,superfamily_Carbohydrate phosphatase	HMMPfam_Inositol_P,superfamily_Carbohydrate phosphatase,PatternScan_IMP_1,PatternScan_IMP_2	-	no_errors
HOOK2	29911	genome.wustl.edu	36	19	12742807	12742807	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	19	12742807	12742807	G	A	SNP	HOOK2	NM_013312	human	genbank	54_36p	-1	validated	nonsense	c.841	p.Q281*	1.000	HMMPfam_HOOK	HMMPfam_HOOK	-	no_errors
PRAMEF12	390999	genome.wustl.edu	36	1	12757623	12757623	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	1	12757623	12757623	T	A	SNP	PRAMEF12	NM_001080830	human	genbank	54_36p	+1	provisional	missense	c.26	p.L9H	0.197	NULL	superfamily_SSF52047	-	no_errors
ZNF834	0	genome.wustl.edu	36	21	13391612	13391612	+	Nonsense_Mutation	SNP	T	T	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	21	13391612	13391612	T	A	SNP	ZNF834	ENST00000305570	human	ensembl	54_36p	-1	known	nonsense	c.232	p.K78*	0.023	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_start_codon
LOC729057	729057	genome.wustl.edu	36	22	14503793	14503793	+	RNA	SNP	G	G	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	22	14503793	14503793	G	A	SNP	LOC729057	XR_042044	human	genbank	54_36p	+1	model	rna	NULL	NULL	0.001	-	-	-	no_errors
OR7A2P	0	genome.wustl.edu	36	19	14836330	14836330	+	Silent	SNP	C	C	G	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	19	14836330	14836330	C	G	SNP	OR7A2P	ENST00000304105	human	ensembl	54_36p	-1	known	silent	c.198	p.L66	0.005	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	-	no_start_codon
PIK3R2	5296	genome.wustl.edu	36	19	18134867	18134867	+	Silent	SNP	C	C	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	19	18134867	18134867	C	T	SNP	PIK3R2	NM_005027	human	genbank	54_36p	+1	validated	silent	c.1200	p.D400	0.833	superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2	superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP,superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2	-	no_errors
NAT2	10	genome.wustl.edu	36	8	18302220	18302220	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	8	18302220	18302220	C	T	SNP	NAT2	NM_000015	human	genbank	54_36p	+1	reviewed	nonsense	c.427	p.Q143*	1.000	superfamily_SSF54001,HMMPfam_Acetyltransf_2	superfamily_SSF54001,HMMPfam_Acetyltransf_2	-	no_errors
GJA3	2700	genome.wustl.edu	36	13	19615150	19615150	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	13	19615150	19615150	A	G	SNP	GJA3	NM_021954	human	genbank	54_36p	-1	validated	missense	c.278	p.L93P	1.000	HMMPfam_Connexin	HMMPfam_Connexin,HMMSmart_SM00037,PatternScan_CONNEXINS_1,HMMPfam_Connexin_CCC,PatternScan_CONNEXINS_2	-	no_errors
OR4K17	390436	genome.wustl.edu	36	14	19656235	19656235	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	14	19656235	19656235	T	C	SNP	OR4K17	NM_001004715	human	genbank	54_36p	+1	provisional	missense	c.830	p.V277A	0.250	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
RPGRIP1	57096	genome.wustl.edu	36	14	20832807	20832807	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	14	20832807	20832807	A	T	SNP	RPGRIP1	NM_020366	human	genbank	54_36p	+1	reviewed	missense	c.217	p.R73W	1.000	NULL	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_C2	-	no_errors
ENSG00000211685	0	genome.wustl.edu	36	22	21594888	21594888	+	Silent	SNP	T	T	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	22	21594888	21594888	T	A	SNP	ENSG00000211685	ENST00000390331	human	ensembl	54_36p	+1	known	silent	c.123	p.P41	0.998	superfamily_Immunoglobulin,HMMPfam_C1-set,HMMSmart_SM00407	superfamily_Immunoglobulin,HMMPfam_C1-set,HMMSmart_SM00407,PatternScan_IG_MHC	-	no_start_codon:pseudogene:no_stop_codon:bad_bp_length_for_coding_region
ABCC9	10060	genome.wustl.edu	36	12	21860030	21860030	+	Silent	SNP	G	G	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	12	21860030	21860030	G	A	SNP	ABCC9	NM_005691	human	genbank	54_36p	-1	reviewed	silent	c.3957	p.V1319	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,HMMPfam_ABC_membrane,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran,PatternScan_ABC_TRANSPORTER_1	-	no_errors
PRDM9	56979	genome.wustl.edu	36	5	23545387	23545387	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	5	23545387	23545387	G	A	SNP	PRDM9	NM_020227	human	genbank	54_36p	+1	provisional	missense	c.121	p.A41T	0.713	superfamily_Krueppel-associated_box,HMMSmart_KRAB,HMMPfam_KRAB	superfamily_Krueppel-associated_box,HMMSmart_KRAB,HMMPfam_KRAB,HMMPfam_SSXRD,superfamily_SSF82199,HMMSmart_SET,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_SSF57667,HMMPfam_zf-C2H2	-	no_errors
PRKCB	5579	genome.wustl.edu	36	16	24109912	24109912	+	Silent	SNP	C	C	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	16	24109912	24109912	C	T	SNP	PRKCB	NM_002738	human	genbank	54_36p	+1	reviewed	silent	c.1723	p.L575	1.000	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase	superfamily_Cysteine-rich domain,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,HMMSmart_SM00133,HMMPfam_Pkinase_C	-	no_errors
PDK3	5165	genome.wustl.edu	36	X	24456122	24456122	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	X	24456122	24456122	C	A	SNP	PDK3	NM_005391	human	genbank	54_36p	+1	validated	missense	c.861	p.D287E	0.991	superfamily_ATP_bd_ATPase,HMMPfam_HATPase_c,HMMSmart_HATPase_c	superfamily_SSF69012,HMMPfam_BCDHK_Adom3,superfamily_ATP_bd_ATPase,HMMPfam_HATPase_c,HMMSmart_HATPase_c	-	no_errors
CCL11	6356	genome.wustl.edu	36	17	29637003	29637003	+	Silent	SNP	G	G	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	17	29637003	29637003	G	T	SNP	CCL11	NM_002986	human	genbank	54_36p	+1	reviewed	silent	c.63	p.G21	0.032	NULL	superfamily_Interleukin 8-like chemokines,HMMPfam_IL8,HMMSmart_SM00199,PatternScan_SMALL_CYTOKINES_CC	-	no_errors
GABBR1	2550	genome.wustl.edu	36	6	29686750	29686750	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	6	29686750	29686750	G	C	SNP	GABBR1	NM_001470	human	genbank	54_36p	-1	reviewed	missense	c.1638	p.S546R	0.998	superfamily_Periplasmic binding protein-like I	superfamily_Complement control module/SCR domain,HMMSmart_SM00032,HMMPfam_Sushi,superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor,HMMPfam_7tm_3	-	no_errors
GRIK1	2897	genome.wustl.edu	36	21	29855911	29855911	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	21	29855911	29855911	G	T	SNP	GRIK1	NM_000830	human	genbank	54_36p	-1	reviewed	missense	c.2261	p.S754Y	1.000	HMMSmart_SM00079,superfamily_Periplasmic binding protein-like II,HMMPfam_Lig_chan	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor,HMMSmart_SM00079,superfamily_Periplasmic binding protein-like II,HMMPfam_Lig_chan-Glu_bd,HMMPfam_Lig_chan	-	no_errors
HEATR5A	25938	genome.wustl.edu	36	14	30882966	30882966	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	14	30882966	30882966	T	A	SNP	HEATR5A	NM_015473	human	genbank	54_36p	-1	validated	missense	c.2236	p.M746L	1.000	superfamily_ARM repeat	superfamily_ARM repeat,HMMPfam_HEAT	-	no_errors
FRY	10129	genome.wustl.edu	36	13	31647719	31647719	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	13	31647719	31647719	C	A	SNP	FRY	NM_023037	human	genbank	54_36p	+1	validated	missense	c.2371	p.L791I	1.000	NULL	PatternScan_GHMP_KINASES_ATP	-	no_errors
CCDC129	223075	genome.wustl.edu	36	7	31649438	31649438	+	Silent	SNP	C	C	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	7	31649438	31649438	C	T	SNP	CCDC129	NM_194300	human	genbank	54_36p	+1	validated	silent	c.1929	p.I643	0.001	NULL	PatternScan_PA2_HIS	-	no_errors
SON	6651	genome.wustl.edu	36	21	33844235	33844235	+	Silent	SNP	G	G	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	21	33844235	33844235	G	T	SNP	SON	NM_138927	human	genbank	54_36p	+1	reviewed	silent	c.828	p.L276	1.000	NULL	HMMSmart_SM00443,HMMPfam_G-patch,superfamily_dsRNA-binding domain-like,HMMPfam_dsrm	-	no_errors
LOC728257	728257	genome.wustl.edu	36	15	34697618	34697618	+	RNA	SNP	T	T	G	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	15	34697618	34697618	T	G	SNP	LOC728257	XR_015358	human	genbank	54_36p	+1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
RAPGEFL1	51195	genome.wustl.edu	36	17	35601437	35601437	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	17	35601437	35601437	G	C	SNP	RAPGEFL1	NM_016339	human	genbank	54_36p	+1	validated	missense	c.974	p.R325P	0.971	superfamily_Ras_GEF,HMMSmart_RasGEF,HMMPfam_RasGEF	superfamily_Ras_GEF,HMMPfam_RA,HMMSmart_RasGEF,HMMPfam_RasGEF	-	no_errors
MIPOL1	145282	genome.wustl.edu	36	14	36824386	36824386	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	14	36824386	36824386	G	A	SNP	MIPOL1	NM_138731	human	genbank	54_36p	+1	validated	missense	c.606	p.M202I	0.995	NULL	NULL	-	no_errors
GOLGA4	2803	genome.wustl.edu	36	3	37342304	37342304	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	3	37342304	37342304	G	C	SNP	GOLGA4	NM_002078	human	genbank	54_36p	+1	reviewed	missense	c.3923	p.S1308T	0.996	NULL	superfamily_Prefoldin,PatternScan_PHOSPHOPANTETHEINE,HMMPfam_GRIP,HMMSmart_SM00755,superfamily_GRIP domain	-	no_errors
COASY	80347	genome.wustl.edu	36	17	37970581	37970581	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	17	37970581	37970581	T	G	SNP	COASY	NM_001042529	human	genbank	54_36p	+1	validated	missense	c.1292	p.F431C	1.000	HMMPfam_CoaE,superfamily_P-loop containing nucleoside triphosphate hydrolases	superfamily_Nucleotidylyl transferase,HMMPfam_CTP_transf_2,HMMPfam_CoaE,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
BCOR	54880	genome.wustl.edu	36	X	39808066	39808066	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	X	39808066	39808066	C	G	SNP	BCOR	ENST00000378444	human	ensembl	54_36p	-1	known	missense	c.3586	p.V1196L	1.000	NULL	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank	-	no_errors
PRDM15	63977	genome.wustl.edu	36	21	42132807	42132807	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	21	42132807	42132807	G	C	SNP	PRDM15	NM_022115	human	genbank	54_36p	-1	validated	missense	c.1963	p.P655A	0.879	NULL	HMMSmart_SET,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_SSF57667,HMMPfam_zf-C2H2	-	no_errors
ZC3H13	23091	genome.wustl.edu	36	13	45461096	45461096	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	13	45461096	45461096	C	T	SNP	ZC3H13	NM_015070	human	genbank	54_36p	-1	validated	missense	c.1082	p.R361Q	1.000	NULL	superfamily_SSF90229,HMMSmart_ZnF_C3H1,HMMPfam_zf-CCCH	-	no_errors
LRRC41	10489	genome.wustl.edu	36	1	46524760	46524760	+	Splice_Site	SNP	T	T	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	1	46524760	46524760	T	A	SNP	LRRC41	NM_006369	human	genbank	54_36p	-1	validated	splice_site	c.358-2	e4-2	1.000	-	-	-	no_errors
TNS3	64759	genome.wustl.edu	36	7	47375320	47375320	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	7	47375320	47375320	G	T	SNP	TNS3	NM_022748	human	genbank	54_36p	-1	validated	missense	c.1448	p.P483H	0.999	NULL	superfamily_(Phosphotyrosine protein) phosphatases II,HMMSmart_SM00404,HMMPfam_PTEN_C2,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2,superfamily_PH domain-like,HMMSmart_SM00462,HMMPfam_PTB	-	no_errors
MEGF8	1954	genome.wustl.edu	36	19	47559123	47559123	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	19	47559123	47559123	C	T	SNP	MEGF8	NM_001410	human	genbank	54_36p	+1	validated	missense	c.5941	p.P1981S	1.000	NULL	superfamily_CUB,HMMSmart_CUB,HMMPfam_CUB,HMMSmart_EGF,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_2,superfamily_Gal_oxid_central,HMMPfam_Kelch_1,HMMSmart_PSI,PatternScan_C_TYPE_LECTIN_1,HMMPfam_PSI,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_EGF_CA,superfamily_SSF57196,PatternScan_ASX_HYDROXYL,HMMPfam_Laminin_EGF,PatternScan_EGF_LAM_1,HMMSmart_EGF_Lam	-	no_errors
PSG3	5671	genome.wustl.edu	36	19	47936367	47936367	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	19	47936367	47936367	G	A	SNP	PSG3	NM_021016	human	genbank	54_36p	-1	validated	missense	c.10	p.L4F	0.004	HMMPfam_V-set	HMMPfam_V-set,superfamily_SSF48726,HMMSmart_IG,HMMPfam_ig,HMMSmart_IGc2	-	no_errors
WDR6	11180	genome.wustl.edu	36	3	49027119	49027119	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	3	49027119	49027119	G	C	SNP	WDR6	NM_018031	human	genbank	54_36p	+1	reviewed	missense	c.2866	p.V956L	0.076	superfamily_WD40_like	superfamily_WD40_like,HMMSmart_WD40,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors
DAG1	1605	genome.wustl.edu	36	3	49543777	49543777	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	3	49543777	49543777	G	T	SNP	DAG1	NM_004393	human	genbank	54_36p	+1	reviewed	missense	c.829	p.V277L	1.000	HMMPfam_DAG1,superfamily_SSF111006	HMMPfam_DAG1,superfamily_Cadherin,HMMSmart_CADG,superfamily_SSF111006	-	no_errors
C18orf26	284254	genome.wustl.edu	36	18	50409467	50409467	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	18	50409467	50409467	G	T	SNP	C18orf26	NM_173629	human	genbank	54_36p	+1	predicted	nonsense	c.34	p.E12*	0.149	NULL	NULL	-	no_errors
SCN8A	6334	genome.wustl.edu	36	12	50449124	50449124	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	12	50449124	50449124	T	G	SNP	SCN8A	NM_014191	human	genbank	54_36p	+1	validated	missense	c.3110	p.L1037W	1.000	HMMPfam_Na_trans_assoc	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc,PatternScan_ODR_DC_2_1,HMMSmart_SM00015,HMMPfam_IQ	-	no_errors
NUDT11	55190	genome.wustl.edu	36	X	51255956	51255956	+	Silent	SNP	G	G	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	X	51255956	51255956	G	A	SNP	NUDT11	NM_018159	human	genbank	54_36p	-1	validated	silent	c.81	p.S27	1.000	superfamily_NUDIX_hydrolase,HMMPfam_NUDIX	superfamily_NUDIX_hydrolase,HMMPfam_NUDIX,PatternScan_NUDIX	-	no_errors
LRRC66	339977	genome.wustl.edu	36	4	52556138	52556138	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	4	52556138	52556138	T	C	SNP	LRRC66	NM_001024611	human	genbank	54_36p	-1	provisional	missense	c.1807	p.S603G	0.000	NULL	superfamily_SSF52058,HMMPfam_LRR_1	-	no_errors
ECHDC2	55268	genome.wustl.edu	36	1	53137449	53137449	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	1	53137449	53137449	A	C	SNP	ECHDC2	NM_018281	human	genbank	54_36p	-1	validated	missense	c.645	p.I215M	0.998	superfamily_SSF52096	superfamily_SSF52096,HMMPfam_ECH	-	no_errors
ERC2	26059	genome.wustl.edu	36	3	56016332	56016332	+	Silent	SNP	T	T	G	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	3	56016332	56016332	T	G	SNP	ERC2	NM_015576	human	genbank	54_36p	-1	validated	silent	c.1978	p.R660	1.000	HMMPfam_Cast	HMMPfam_Cast,superfamily_Prefoldin	-	no_errors
ZNF614	80110	genome.wustl.edu	36	19	57212296	57212296	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	19	57212296	57212296	T	C	SNP	ZNF614	NM_025040	human	genbank	54_36p	-1	validated	missense	c.367	p.I123V	0.001	NULL	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMSmart_ZnF_C2H2,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ZNF665	79788	genome.wustl.edu	36	19	58359997	58359997	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	19	58359997	58359997	C	G	SNP	ZNF665	NM_024733	human	genbank	54_36p	-1	provisional	missense	c.1558	p.G520R	0.956	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
LILRA4	23547	genome.wustl.edu	36	19	59540051	59540051	+	Silent	SNP	G	G	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	19	59540051	59540051	G	A	SNP	LILRA4	NM_012276	human	genbank	54_36p	-1	reviewed	silent	c.1128	p.Y376	0.054	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig	-	no_errors
NLRP7	199713	genome.wustl.edu	36	19	60142348	60142348	+	Silent	SNP	G	G	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	19	60142348	60142348	G	A	SNP	NLRP7	NM_139176	human	genbank	54_36p	-1	reviewed	silent	c.1651	p.L551	0.029	NULL	superfamily_DEATH_like,HMMPfam_PAAD_DAPIN,superfamily_SSF52540,HMMPfam_NACHT,superfamily_SSF52047	-	no_errors
USP34	9736	genome.wustl.edu	36	2	61268866	61268866	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	2	61268866	61268866	G	A	SNP	USP34	NM_014709	human	genbank	54_36p	-1	validated	missense	c.10516	p.H3506Y	1.000	NULL	superfamily_Cysteine proteinases,HMMPfam_UCH,PatternScan_UCH_2_1,PatternScan_UCH_2_2	-	no_errors
INADL	10207	genome.wustl.edu	36	1	62228538	62228538	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	1	62228538	62228538	C	T	SNP	INADL	NM_176877	human	genbank	54_36p	+1	reviewed	missense	c.3781	p.R1261C	1.000	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228	HMMPfam_L27_2,HMMSmart_SM00569,superfamily_L27 domain,superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228	-	no_errors
PRKCA	5578	genome.wustl.edu	36	17	62230492	62230492	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	17	62230492	62230492	C	T	SNP	PRKCA	NM_002737	human	genbank	54_36p	+1	reviewed	nonsense	c.1894	p.R632*	0.999	HMMSmart_SM00133,HMMPfam_Pkinase_C	superfamily_Cysteine-rich domain,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,HMMSmart_SM00133,HMMPfam_Pkinase_C	-	no_errors
ZNF587	84914	genome.wustl.edu	36	19	63053236	63053236	+	Silent	SNP	G	G	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	19	63053236	63053236	G	A	SNP	ZNF587	NM_032828	human	genbank	54_36p	+1	provisional	silent	c.18	p.P6	0.004	NULL	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2	-	no_errors
ZNF679	168417	genome.wustl.edu	36	7	63358052	63358052	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	7	63358052	63358052	G	T	SNP	ZNF679	ENST00000255746	human	ensembl	54_36p	+1	known	missense	c.58	p.D20Y	0.024	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
SYNE2	23224	genome.wustl.edu	36	14	63588153	63588153	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	14	63588153	63588153	A	G	SNP	SYNE2	NM_182914	human	genbank	54_36p	+1	validated	missense	c.7769	p.D2590G	0.044	NULL	superfamily_Calponin-homology,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_CH,PatternScan_ACTININ_2,superfamily_Spectrin,HMMSmart_SPEC,HMMPfam_Spectrin,superfamily_4_helix_cytokine,HMMPfam_KASH	-	no_errors
NRBF2	29982	genome.wustl.edu	36	10	64583968	64583968	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	10	64583968	64583968	G	T	SNP	NRBF2	NM_030759	human	genbank	54_36p	+1	validated	missense	c.848	p.G283V	1.000	HMMPfam_DUF1875	HMMPfam_DUF1875	-	no_errors
LOC645430	645430	genome.wustl.edu	36	X	65211995	65211995	+	RNA	SNP	T	T	C	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	X	65211995	65211995	T	C	SNP	LOC645430	XR_016872	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.248	-	-	-	pseudogene
YTHDC1	91746	genome.wustl.edu	36	4	68878568	68878568	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	4	68878568	68878568	G	C	SNP	YTHDC1	NM_001031732	human	genbank	54_36p	-1	validated	missense	c.1178	p.S393C	1.000	NULL	HMMPfam_YTH	-	no_errors
LOC340888	340888	genome.wustl.edu	36	10	69180300	69180300	+	RNA	SNP	G	G	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	10	69180300	69180300	G	A	SNP	LOC340888	XR_016984	human	genbank	54_36p	+1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
ARR3	407	genome.wustl.edu	36	X	69414078	69414078	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	X	69414078	69414078	C	A	SNP	ARR3	NM_004312	human	genbank	54_36p	+1	validated	missense	c.583	p.Q195K	1.000	superfamily_E set domains,HMMPfam_Arrestin_C	superfamily_E set domains,HMMPfam_Arrestin_N,PatternScan_ARRESTINS,HMMPfam_Arrestin_C	-	no_errors
HYDIN	54768	genome.wustl.edu	36	16	69457709	69457709	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	16	69457709	69457709	C	T	SNP	HYDIN	NM_032821	human	genbank	54_36p	-1	validated	missense	c.11332	p.A3778T	0.494	NULL	superfamily_PapD-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ZNF407	55628	genome.wustl.edu	36	18	70472924	70472924	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	18	70472924	70472924	C	T	SNP	ZNF407	NM_017757	human	genbank	54_36p	+1	provisional	nonsense	c.961	p.R321*	0.000	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00451,superfamily_Glucocorticoid receptor-like (DNA-binding domain)	-	no_errors
PHKA1	5255	genome.wustl.edu	36	X	71729846	71729846	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	X	71729846	71729846	G	T	SNP	PHKA1	NM_002637	human	genbank	54_36p	-1	validated	missense	c.3076	p.P1026T	1.000	HMMPfam_PHK_AB	HMMPfam_PHK_AB,superfamily_Six-hairpin glycosidases	-	no_errors
LRRC20	55222	genome.wustl.edu	36	10	71753647	71753647	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	10	71753647	71753647	G	C	SNP	LRRC20	NM_207119	human	genbank	54_36p	-1	validated	missense	c.378	p.N126K	0.996	superfamily_L domain-like,HMMSmart_SM00369	superfamily_L domain-like,HMMSmart_SM00369,HMMPfam_LRR_1	-	no_errors
PDE2A	5138	genome.wustl.edu	36	11	71966189	71966189	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	11	71966189	71966189	G	A	SNP	PDE2A	NM_002599	human	genbank	54_36p	-1	validated	missense	c.2713	p.R905C	1.000	superfamily_HD-domain/PDEase-like	superfamily_GAF domain-like,HMMPfam_GAF,HMMSmart_SM00065,superfamily_HD-domain/PDEase-like,HMMSmart_SM00471,HMMPfam_PDEase_I,PatternScan_PDEASE_I	-	no_errors
XIST	7503	genome.wustl.edu	36	X	72985624	72985624	+	RNA	SNP	A	A	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	X	72985624	72985624	A	T	SNP	XIST	NR_001564	human	genbank	54_36p	-1	reviewed	rna	NULL	NULL	0.115	-	-	-	no_errors
DCTN1	1639	genome.wustl.edu	36	2	74447126	74447126	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	2	74447126	74447126	G	T	SNP	DCTN1	NM_004082	human	genbank	54_36p	-1	reviewed	missense	c.2596	p.L866M	0.971	NULL	superfamily_Cap-Gly domain,HMMPfam_CAP_GLY,PatternScan_CAP_GLY_1,superfamily_Spectrin repeat	-	no_errors
HIP1	3092	genome.wustl.edu	36	7	75011964	75011964	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	7	75011964	75011964	C	A	SNP	HIP1	NM_005338	human	genbank	54_36p	-1	reviewed	missense	c.2731	p.A911S	0.999	superfamily_I/LWEQ domain (Pfam 01608),HMMSmart_SM00307,HMMPfam_I_LWEQ	HMMPfam_ANTH,superfamily_ENTH/VHS domain,HMMSmart_SM00273,superfamily_ARM repeat,superfamily_I/LWEQ domain (Pfam 01608),HMMSmart_SM00307,HMMPfam_I_LWEQ	-	no_errors
ROBO2	6092	genome.wustl.edu	36	3	77695140	77695140	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	3	77695140	77695140	C	T	SNP	ROBO2	NM_002942	human	genbank	54_36p	+1	reviewed	missense	c.1652	p.P551L	1.000	superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMSmart_SM00406,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	-	no_errors
BHMT	635	genome.wustl.edu	36	5	78452047	78452047	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	5	78452047	78452047	C	A	SNP	BHMT	NM_001713	human	genbank	54_36p	+1	reviewed	missense	c.404	p.T135N	0.002	superfamily_S_methyl_trans,HMMPfam_S-methyl_trans	superfamily_S_methyl_trans,HMMPfam_S-methyl_trans	-	no_errors
PAPD4	167153	genome.wustl.edu	36	5	78976746	78976746	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	5	78976746	78976746	A	G	SNP	PAPD4	NM_173797	human	genbank	54_36p	+1	validated	missense	c.796	p.I266V	1.000	superfamily_Nucleotidyltransferase	superfamily_Nucleotidyltransferase,superfamily_PAP/OAS1 substrate-binding domain,HMMPfam_PAP_assoc	-	no_errors
LOC727874	727874	genome.wustl.edu	36	X	79703118	79703118	+	RNA	SNP	G	G	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	X	79703118	79703118	G	T	SNP	LOC727874	XR_042356	human	genbank	54_36p	+1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
BRWD3	254065	genome.wustl.edu	36	X	79830228	79830228	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	X	79830228	79830228	C	T	SNP	BRWD3	NM_153252	human	genbank	54_36p	-1	validated	missense	c.3860	p.R1287K	0.834	superfamily_Bromodomain	HMMSmart_SM00320,HMMPfam_WD40,superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase,PatternScan_WD_REPEATS_1,superfamily_Bromodomain,HMMSmart_SM00297,HMMPfam_Bromodomain	-	no_errors
SCD5	79966	genome.wustl.edu	36	4	83776793	83776793	+	Silent	SNP	G	G	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	4	83776793	83776793	G	A	SNP	SCD5	NM_001037582	human	genbank	54_36p	-1	validated	silent	c.777	p.N259	0.257	HMMPfam_FA_desaturase	HMMPfam_FA_desaturase,PatternScan_FATTY_ACID_DESATUR_1	-	no_errors
LOC645181	645181	genome.wustl.edu	36	5	84881216	84881216	+	RNA	SNP	G	G	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	5	84881216	84881216	G	A	SNP	LOC645181	XR_017382	human	genbank	54_36p	+1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
POLR1A	25885	genome.wustl.edu	36	2	86123628	86123628	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	2	86123628	86123628	G	A	SNP	POLR1A	NM_015425	human	genbank	54_36p	-1	validated	missense	c.3337	p.R1113C	0.997	superfamily_beta and beta-prime subunits of DNA dependent RNA-polymerase,HMMPfam_RNA_pol_Rpb1_5	superfamily_beta and beta-prime subunits of DNA dependent RNA-polymerase,HMMPfam_RNA_pol_Rpb1_1,HMMSmart_SM00663,HMMPfam_RNA_pol_Rpb1_2,HMMPfam_RNA_pol_Rpb1_3,HMMPfam_RNA_pol_Rpb1_4,HMMPfam_RNA_pol_Rpb1_5	-	no_errors
DUSP6	1848	genome.wustl.edu	36	12	88267336	88267336	+	Silent	SNP	T	T	C	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	12	88267336	88267336	T	C	SNP	DUSP6	NM_001946	human	genbank	54_36p	-1	reviewed	silent	c.972	p.K324	1.000	superfamily_(Phosphotyrosine protein) phosphatases II,HMMPfam_DSPc,HMMSmart_SM00195	superfamily_Rhodanese/Cell cycle control phosphatase,HMMPfam_Rhodanese,HMMSmart_SM00450,superfamily_(Phosphotyrosine protein) phosphatases II,HMMPfam_DSPc,HMMSmart_SM00195	-	no_errors
AGAP11	119385	genome.wustl.edu	36	10	88759574	88759574	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	10	88759574	88759574	C	T	SNP	AGAP11	NM_133447	human	genbank	54_36p	+1	validated	missense	c.1585	p.R529W	0.999	superfamily_ANK,HMMPfam_Ank,HMMSmart_ANK	superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH,superfamily_ArfGAP,HMMPfam_ArfGap,HMMSmart_ArfGap,superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank	-	no_errors
RPS6KA5	9252	genome.wustl.edu	36	14	90456390	90456390	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	14	90456390	90456390	C	T	SNP	RPS6KA5	NM_004755	human	genbank	54_36p	-1	validated	missense	c.719	p.S240N	1.000	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,HMMSmart_S_TK_X,HMMPfam_Pkinase_C	-	no_errors
PABPC5	140886	genome.wustl.edu	36	X	90577705	90577705	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	X	90577705	90577705	C	A	SNP	PABPC5	NM_080832	human	genbank	54_36p	+1	validated	missense	c.473	p.A158D	1.000	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMSmart_SM00361,HMMPfam_RRM_1	HMMSmart_SM00360,HMMPfam_RRM_1,superfamily_RNA-binding domain RBD,HMMSmart_SM00361	-	no_errors
ARRDC3	57561	genome.wustl.edu	36	5	90706613	90706613	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	5	90706613	90706613	C	T	SNP	ARRDC3	NM_020801	human	genbank	54_36p	-1	validated	missense	c.752	p.R251H	1.000	superfamily_Ig_E-set,HMMPfam_Arrestin_C	HMMPfam_Arrestin_N,superfamily_Ig_E-set,HMMPfam_Arrestin_C	-	no_errors
LOC100132302	0	genome.wustl.edu	36	X	91124511	91124511	+	RNA	SNP	G	G	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	X	91124511	91124511	G	T	SNP	LOC100132302	XR_038899	human	genbank	54_36p	-1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
LOC100132302	0	genome.wustl.edu	36	X	91124776	91124776	+	RNA	SNP	T	T	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	X	91124776	91124776	T	A	SNP	LOC100132302	XR_038899	human	genbank	54_36p	-1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
C11orf54	28970	genome.wustl.edu	36	11	93126522	93126522	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	11	93126522	93126522	G	T	SNP	C11orf54	NM_014039	human	genbank	54_36p	+1	predicted	nonsense	c.181	p.E61*	1.000	HMMPfam_DUF1907	HMMPfam_DUF1907	-	no_errors
CCDC41	51134	genome.wustl.edu	36	12	93321160	93321160	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	12	93321160	93321160	G	C	SNP	CCDC41	NM_001042399	human	genbank	54_36p	-1	validated	missense	c.334	p.P112A	1.000	NULL	NULL	-	no_errors
GAS2L3	283431	genome.wustl.edu	36	12	99542755	99542755	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	12	99542755	99542755	G	A	SNP	GAS2L3	NM_174942	human	genbank	54_36p	+1	provisional	missense	c.2041	p.D681N	1.000	NULL	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,HMMSmart_SM00033,HMMPfam_GAS2,HMMSmart_SM00243	-	no_errors
UTP20	27340	genome.wustl.edu	36	12	100209700	100209700	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	12	100209700	100209700	A	G	SNP	UTP20	NM_014503	human	genbank	54_36p	+1	validated	missense	c.941	p.E314G	0.967	superfamily_ARM repeat	superfamily_ARM repeat,HMMPfam_DRIM	-	no_errors
ADH5	128	genome.wustl.edu	36	4	100216921	100216921	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	4	100216921	100216921	C	A	SNP	ADH5	NM_000671	human	genbank	54_36p	-1	reviewed	missense	c.521	p.C174F	1.000	superfamily_GroES-like	superfamily_GroES-like,HMMPfam_ADH_N,PatternScan_ADH_ZINC,superfamily_NAD(P)-binding Rossmann-fold domains,HMMPfam_ADH_zinc_N	-	no_errors
SNX31	169166	genome.wustl.edu	36	8	101670323	101670323	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	8	101670323	101670323	A	T	SNP	SNX31	NM_152628	human	genbank	54_36p	-1	validated	missense	c.1039	p.F347I	1.000	NULL	HMMSmart_SM00312,superfamily_PX domain,HMMPfam_PX	-	no_errors
MMP1	4312	genome.wustl.edu	36	11	102172673	102172673	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	11	102172673	102172673	T	G	SNP	MMP1	NM_002421	human	genbank	54_36p	-1	reviewed	missense	c.557	p.Q186P	0.001	HMMSmart_ZnMc,superfamily_SSF55486,HMMPfam_Peptidase_M10	HMMPfam_PG_binding_1,superfamily_PGBD_like,PatternScan_CYSTEINE_SWITCH,HMMSmart_ZnMc,superfamily_SSF55486,HMMPfam_Peptidase_M10,PatternScan_ZINC_PROTEASE,superfamily_Hemopexin,HMMPfam_Hemopexin,HMMSmart_HX,PatternScan_HEMOPEXIN	-	no_errors
NACAP1	83955	genome.wustl.edu	36	8	102450829	102450829	+	RNA	SNP	A	A	G	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	8	102450829	102450829	A	G	SNP	NACAP1	NR_002182	human	genbank	54_36p	+1	provisional	rna	NULL	NULL	1.000	-	-	-	pseudogene
PDGFD	80310	genome.wustl.edu	36	11	103303056	103303056	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	11	103303056	103303056	C	T	SNP	PDGFD	NM_025208	human	genbank	54_36p	-1	reviewed	missense	c.781	p.D261N	1.000	superfamily_Cystine-knot cytokines	PatternScan_TONB_DEPENDENT_REC_1,HMMSmart_SM00042,superfamily_Spermadhesin CUB domain,HMMPfam_CUB,superfamily_Cystine-knot cytokines,HMMPfam_PDGF	-	no_errors
DKK2	27123	genome.wustl.edu	36	4	108064652	108064652	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	4	108064652	108064652	G	A	SNP	DKK2	NM_014421	human	genbank	54_36p	-1	reviewed	missense	c.688	p.R230C	1.000	NULL	HMMPfam_Dickkopf_N	-	no_errors
COL4A1	1282	genome.wustl.edu	36	13	109602762	109602762	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	13	109602762	109602762	A	T	SNP	COL4A1	NM_001845	human	genbank	54_36p	-1	reviewed	nonsense	c.4848	p.C1616*	1.000	HMMPfam_C4,HMMSmart_SM00111,superfamily_C-type lectin-like	HMMPfam_Collagen,superfamily_C-type lectin-like,HMMPfam_C4,HMMSmart_SM00111	-	no_errors
PPP1R3A	5506	genome.wustl.edu	36	7	113305085	113305085	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	7	113305085	113305085	A	G	SNP	PPP1R3A	NM_002711	human	genbank	54_36p	-1	reviewed	missense	c.3298	p.F1100L	0.998	NULL	HMMPfam_CBM_21	-	no_errors
LARP7	51574	genome.wustl.edu	36	4	113787818	113787818	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	4	113787818	113787818	A	G	SNP	LARP7	NM_015454	human	genbank	54_36p	+1	validated	missense	c.661	p.K221E	1.000	NULL	"superfamily_""Winged helix"" DNA-binding domain,HMMSmart_SM00715,HMMPfam_La,superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1,HMMPfam_RRM_3"	-	no_errors
HTR2C	3358	genome.wustl.edu	36	X	113871987	113871987	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	X	113871987	113871987	C	A	SNP	HTR2C	NM_000868	human	genbank	54_36p	+1	reviewed	missense	c.64	p.Q22K	0.996	NULL	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
SLC31A1	1317	genome.wustl.edu	36	9	115060833	115060833	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	9	115060833	115060833	A	G	SNP	SLC31A1	NM_001859	human	genbank	54_36p	+1	validated	missense	c.241	p.M81V	1.000	HMMPfam_Ctr	HMMPfam_Ctr	-	no_errors
AKNA	80709	genome.wustl.edu	36	9	116143687	116143687	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	9	116143687	116143687	T	G	SNP	AKNA	ENST00000374075	human	ensembl	54_36p	-1	known	missense	c.1751	p.Q584P	0.057	NULL	NULL	-	no_errors
FAM26F	441168	genome.wustl.edu	36	6	116891502	116891502	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	6	116891502	116891502	G	T	SNP	FAM26F	NM_001010919	human	genbank	54_36p	+1	predicted	missense	c.889	p.V297L	0.000	NULL	NULL	-	no_errors
ATRNL1	26033	genome.wustl.edu	36	10	117144162	117144162	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	10	117144162	117144162	G	C	SNP	ATRNL1	NM_207303	human	genbank	54_36p	+1	validated	missense	c.3179	p.C1060S	1.000	superfamily_EGF/Laminin,PatternScan_EGF_LAM_1,HMMPfam_Laminin_EGF,HMMSmart_SM00180	superfamily_EGF/Laminin,HMMSmart_SM00181,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042,HMMPfam_EGF_2,superfamily_Galactose oxidase central domain,HMMPfam_Kelch_1,HMMPfam_Kelch_2,superfamily_Plexin repeat,HMMSmart_SM00423,HMMPfam_PSI,superfamily_C-type lectin-like,HMMSmart_SM00034,HMMPfam_Lectin_C,HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_LAM_1	-	no_errors
MLL	4297	genome.wustl.edu	36	11	117856163	117856163	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	11	117856163	117856163	G	C	SNP	MLL	NM_005933	human	genbank	54_36p	+1	validated	missense	c.3634	p.A1212P	1.000	NULL	PatternScan_HMGI_Y,HMMPfam_AT_hook,HMMPfam_zf-CXXC,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1,PatternScan_RECR,HMMSmart_SM00297,superfamily_Bromodomain,HMMPfam_FYRN,HMMSmart_SM00541,PatternScan_EF_HAND_1,HMMPfam_FYRC,HMMSmart_SM00542,superfamily_SET domain,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00508	-	no_errors
SLC13A1	6561	genome.wustl.edu	36	7	122550526	122550526	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	7	122550526	122550526	C	T	SNP	SLC13A1	NM_022444	human	genbank	54_36p	-1	validated	splice_site	c.1241-1	e12-1	1.000	-	-	-	no_errors
OR10S1	219873	genome.wustl.edu	36	11	123353070	123353070	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	11	123353070	123353070	A	T	SNP	OR10S1	NM_001004474	human	genbank	54_36p	-1	provisional	missense	c.539	p.L180Q	0.997	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	-	no_errors
NCOR2	9612	genome.wustl.edu	36	12	123378080	123378080	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	12	123378080	123378080	C	T	SNP	NCOR2	NM_006312	human	genbank	54_36p	-1	validated	missense	c.7032	p.M2344I	1.000	NULL	superfamily_Homeodomain-like,HMMSmart_SM00717,HMMPfam_Myb_DNA-binding	-	no_errors
DMBT1	1755	genome.wustl.edu	36	10	124392741	124392741	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	10	124392741	124392741	G	C	SNP	DMBT1	NM_007329	human	genbank	54_36p	+1	reviewed	missense	c.7079	p.C2360S	1.000	HMMPfam_Zona_pellucida,HMMSmart_SM00241	superfamily_SRCR-like,HMMSmart_SM00202,HMMPfam_SRCR,PatternScan_SRCR_1,superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042,HMMPfam_Zona_pellucida,HMMSmart_SM00241,PatternScan_ZP_1	-	no_errors
FSCN3	29999	genome.wustl.edu	36	7	127023143	127023143	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	7	127023143	127023143	G	T	SNP	FSCN3	NM_020369	human	genbank	54_36p	+1	provisional	nonsense	c.691	p.E231*	1.000	superfamily_Actin_crosslink	superfamily_Actin_crosslink,HMMPfam_Fascin	-	no_errors
RICS	9743	genome.wustl.edu	36	11	128354020	128354020	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	11	128354020	128354020	T	A	SNP	RICS	NM_014715	human	genbank	54_36p	-1	validated	missense	c.888	p.R296S	1.000	NULL	superfamily_Rho_GAP,HMMSmart_RhoGAP,HMMPfam_RhoGAP	-	no_errors
ADAMTS19	171019	genome.wustl.edu	36	5	129005511	129005511	+	Silent	SNP	C	C	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	5	129005511	129005511	C	T	SNP	ADAMTS19	NM_133638	human	genbank	54_36p	+1	reviewed	silent	c.1813	p.L605	0.987	HMMSmart_SM00608	"HMMPfam_Pep_M12B_propep,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Reprolysin,HMMSmart_SM00608,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMPfam_ADAM_spacer1,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_PLAC"	-	no_errors
CPA2	1358	genome.wustl.edu	36	7	129706633	129706633	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	7	129706633	129706633	G	T	SNP	CPA2	NM_001869	human	genbank	54_36p	+1	reviewed	missense	c.876	p.K292N	1.000	superfamily_SSF53187,HMMSmart_Zn_pept,HMMPfam_Peptidase_M14	superfamily_Prot_inh_propept,HMMPfam_Propep_M14,superfamily_SSF53187,HMMSmart_Zn_pept,HMMPfam_Peptidase_M14,PatternScan_CARBOXYPEPT_ZN_1,PatternScan_CARBOXYPEPT_ZN_2	-	no_errors
ADAMTS8	11095	genome.wustl.edu	36	11	129789678	129789678	+	Silent	SNP	T	T	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	11	129789678	129789678	T	A	SNP	ADAMTS8	NM_007037	human	genbank	54_36p	-1	reviewed	silent	c.1524	p.S508	0.952	HMMSmart_SM00608	"HMMPfam_Pep_M12B_propep,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Reprolysin,HMMSmart_SM00608,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMPfam_ADAM_spacer1"	-	no_errors
KLHL3	26249	genome.wustl.edu	36	5	136989441	136989441	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	5	136989441	136989441	A	T	SNP	KLHL3	NM_017415	human	genbank	54_36p	-1	validated	missense	c.1635	p.D545E	1.000	superfamily_Galactose oxidase central domain,HMMPfam_Kelch_1,HMMSmart_SM00612	superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00225,HMMPfam_BACK,superfamily_Galactose oxidase central domain,HMMPfam_Kelch_1,HMMSmart_SM00612	-	no_errors
BRD8	10902	genome.wustl.edu	36	5	137523181	137523181	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	5	137523181	137523181	C	G	SNP	BRD8	NM_139199	human	genbank	54_36p	-1	reviewed	missense	c.2539	p.V847L	1.000	NULL	superfamily_Bromodomain,HMMSmart_SM00297,HMMPfam_Bromodomain	-	no_errors
EGR1	1958	genome.wustl.edu	36	5	137829422	137829422	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	5	137829422	137829422	C	G	SNP	EGR1	NM_001964	human	genbank	54_36p	+1	reviewed	missense	c.73	p.H25D	1.000	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
PCDHGA6	56109	genome.wustl.edu	36	5	140735221	140735221	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	5	140735221	140735221	G	A	SNP	PCDHGA6	NM_018919	human	genbank	54_36p	+1	reviewed	missense	c.1387	p.E463K	0.998	superfamily_Cadherin-like,HMMPfam_Cadherin	superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors
PCDHGA8	9708	genome.wustl.edu	36	5	140754310	140754310	+	Silent	SNP	A	A	G	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	5	140754310	140754310	A	G	SNP	PCDHGA8	NM_032088	human	genbank	54_36p	+1	reviewed	silent	c.1746	p.A582	0.978	superfamily_Cadherin-like,HMMPfam_Cadherin	HMMSmart_SM00112,superfamily_Cadherin-like,HMMPfam_Cadherin_2,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors
SPINK5L2	408187	genome.wustl.edu	36	5	147529508	147529508	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	5	147529508	147529508	T	A	SNP	SPINK5L2	NM_001001325	human	genbank	54_36p	+1	provisional	missense	c.20	p.V7E	0.006	NULL	superfamily_SSF100895,HMMSmart_KAZAL,HMMPfam_Kazal_1,PatternScan_KAZAL	-	no_errors
ARSI	340075	genome.wustl.edu	36	5	149657437	149657437	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	5	149657437	149657437	C	T	SNP	ARSI	NM_001012301	human	genbank	54_36p	-1	validated	missense	c.1243	p.V415M	0.980	HMMPfam_Sulfatase,superfamily_Alkaline phosphatase-like	HMMPfam_Sulfatase,superfamily_Alkaline phosphatase-like,PatternScan_SULFATASE_1,PatternScan_SULFATASE_2	-	no_errors
FLG	2312	genome.wustl.edu	36	1	150550377	150550377	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	1	150550377	150550377	C	A	SNP	FLG	ENST00000271820	human	ensembl	54_36p	-1	known	splice_site	c.1661+1	e3+1	0.001	-	-	-	no_stop_codon
FLG	2312	genome.wustl.edu	36	1	150550879	150550879	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	1	150550879	150550879	C	T	SNP	FLG	NM_002016	human	genbank	54_36p	-1	provisional	missense	c.3107	p.R1036H	0.003	HMMPfam_Filaggrin	PatternScan_S100_CABP,HMMPfam_Filaggrin,HMMPfam_S_100,PatternScan_EF_HAND_1,superfamily_SSF47473	-	no_errors
C6orf211	79624	genome.wustl.edu	36	6	151817385	151817385	+	Silent	SNP	A	A	C	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	6	151817385	151817385	A	C	SNP	C6orf211	NM_024573	human	genbank	54_36p	+1	predicted	silent	c.51	p.A17	0.984	NULL	HMMPfam_DUF89,superfamily_DUF89	-	no_errors
ATP8B2	57198	genome.wustl.edu	36	1	152576479	152576479	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	1	152576479	152576479	T	C	SNP	ATP8B2	NM_020452	human	genbank	54_36p	+1	reviewed	missense	c.968	p.I323T	1.000	superfamily_SSF81665,HMMPfam_E1-E2_ATPase	superfamily_SSF81665,superfamily_SSF81653,HMMPfam_E1-E2_ATPase,superfamily_SSF56784,PatternScan_ATPASE_E1_E2,superfamily_SSF81660,HMMPfam_Hydrolase_3	-	no_errors
ISG20L2	81875	genome.wustl.edu	36	1	154963953	154963953	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	1	154963953	154963953	C	T	SNP	ISG20L2	NM_030980	human	genbank	54_36p	-1	provisional	missense	c.116	p.G39D	0.647	NULL	superfamily_RNaseH_fold,HMMSmart_EXOIII,HMMPfam_Exonuc_X-T	-	no_errors
GPR149	344758	genome.wustl.edu	36	3	155629847	155629847	+	Silent	SNP	C	C	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	3	155629847	155629847	C	T	SNP	GPR149	NM_001038705	human	genbank	54_36p	-1	provisional	silent	c.252	p.S84	0.630	NULL	NULL	-	no_errors
GMPS	8833	genome.wustl.edu	36	3	157125828	157125828	+	Silent	SNP	A	A	G	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	3	157125828	157125828	A	G	SNP	GMPS	NM_003875	human	genbank	54_36p	+1	reviewed	silent	c.1539	p.P513	1.000	superfamily_Adenine nucleotide alpha hydrolases-like,HMMPfam_GMP_synt_C	superfamily_Class I glutamine amidotransferase-like,HMMPfam_GATase,superfamily_Adenine nucleotide alpha hydrolases-like,HMMPfam_ExsB,HMMPfam_GMP_synt_C,superfamily_GMP synthetase C-terminal dimerisation domain	-	no_errors
GFM1	85476	genome.wustl.edu	36	3	159855109	159855109	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	3	159855109	159855109	C	G	SNP	GFM1	NM_024996	human	genbank	54_36p	+1	reviewed	missense	c.1078	p.L360V	1.000	superfamily_Translat_factor	superfamily_SSF52540,HMMPfam_GTP_EFTU,PatternScan_EFACTOR_GTP,superfamily_Translat_factor,HMMPfam_GTP_EFTU_D2,superfamily_EFG_III_V,superfamily_Ribosomal_S5_D2-typ_fold,HMMPfam_EFG_IV,HMMPfam_EFG_C	-	no_errors
LPA	4018	genome.wustl.edu	36	6	160927554	160927554	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	6	160927554	160927554	G	A	SNP	LPA	NM_005577	human	genbank	54_36p	-1	validated	missense	c.4046	p.T1349M	0.022	superfamily_Kringle-like,HMMSmart_SM00130,HMMPfam_Kringle	superfamily_Kringle-like,HMMSmart_SM00130,HMMPfam_Kringle,PatternScan_KRINGLE_1,superfamily_Trypsin-like serine proteases,HMMSmart_SM00020,HMMPfam_Trypsin,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	-	no_errors
RGS4	5999	genome.wustl.edu	36	1	161309944	161309944	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	1	161309944	161309944	G	A	SNP	RGS4	NM_001102445	human	genbank	54_36p	+1	reviewed	missense	c.577	p.E193K	1.000	superfamily_Regulat_G_prot_signal_superfam,HMMPfam_RGS,HMMSmart_RGS	superfamily_Regulat_G_prot_signal_superfam,HMMPfam_RGS,HMMSmart_RGS	-	no_errors
SI	6476	genome.wustl.edu	36	3	166236892	166236892	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	3	166236892	166236892	A	C	SNP	SI	NM_001041	human	genbank	54_36p	-1	validated	missense	c.2494	p.W832G	1.000	NULL	HMMSmart_SM00018,superfamily_Trefoil,HMMPfam_Trefoil,PatternScan_P_TREFOIL,HMMPfam_Glyco_hydro_31,superfamily_(Trans)glycosidases,PatternScan_GLYCOSYL_HYDROL_F31_1,PatternScan_GLYCOSYL_HYDROL_F31_2	-	no_errors
DOCK2	1794	genome.wustl.edu	36	5	169387499	169387499	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	5	169387499	169387499	G	A	SNP	DOCK2	NM_004946	human	genbank	54_36p	+1	validated	missense	c.3436	p.D1146N	0.999	NULL	superfamily_SH3-domain,HMMSmart_SM00326,HMMPfam_SH3_2,superfamily_Cytochrome c	-	no_errors
DOCK2	1794	genome.wustl.edu	36	5	169427236	169427236	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	5	169427236	169427236	G	T	SNP	DOCK2	NM_004946	human	genbank	54_36p	+1	validated	missense	c.4612	p.A1538S	1.000	superfamily_Cytochrome c	HMMSmart_SM00326,superfamily_SH3-domain,superfamily_Cytochrome c,HMMPfam_SH3_2	-	no_errors
TLK1	9874	genome.wustl.edu	36	2	171614703	171614703	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	2	171614703	171614703	T	C	SNP	TLK1	NM_012290	human	genbank	54_36p	-1	validated	missense	c.847	p.T283A	1.000	NULL	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors
TNR	7143	genome.wustl.edu	36	1	173595417	173595417	+	Silent	SNP	T	T	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	1	173595417	173595417	T	A	SNP	TNR	NM_003285	human	genbank	54_36p	-1	validated	silent	c.2928	p.P976	0.000	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_SM00181,HMMPfam_EGF_2,superfamily_EGF/Laminin,HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMSmart_SM00186,HMMPfam_Fibrinogen_C,superfamily_Fibrinogen C-terminal domain-like	-	no_errors
NDUFB5	4711	genome.wustl.edu	36	3	180816469	180816469	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	3	180816469	180816469	T	A	SNP	NDUFB5	NM_002492	human	genbank	54_36p	+1	reviewed	missense	c.218	p.F73Y	1.000	HMMPfam_NDUF_B5	HMMPfam_NDUF_B5	-	no_errors
HTR3C	170572	genome.wustl.edu	36	3	185257382	185257382	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	3	185257382	185257382	G	A	SNP	HTR3C	NM_130770	human	genbank	54_36p	+1	reviewed	missense	c.415	p.G139S	0.000	superfamily_Neur_chan_LBD,HMMPfam_Neur_chan_LBD	superfamily_Neur_chan_LBD,HMMPfam_Neur_chan_LBD,PatternScan_NEUROTR_ION_CHANNEL,superfamily_Neu_channel_TM,HMMPfam_Neur_chan_memb	-	no_errors
ZNF804A	91752	genome.wustl.edu	36	2	185511597	185511597	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	2	185511597	185511597	C	A	SNP	ZNF804A	NM_194250	human	genbank	54_36p	+1	provisional	missense	c.3229	p.P1077T	0.001	NULL	HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
NBEAL1	65065	genome.wustl.edu	36	2	203784057	203784057	+	Silent	SNP	T	T	G	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	2	203784057	203784057	T	G	SNP	NBEAL1	NM_001099273	human	genbank	54_36p	+1	validated	silent	c.3960	p.S1320	1.000	superfamily_WD40 repeat-like,HMMSmart_SM00320	superfamily_PH domain-like,superfamily_BEACH domain,HMMPfam_Beach,superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	-	no_errors
IL24	11009	genome.wustl.edu	36	1	205139330	205139330	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	1	205139330	205139330	G	T	SNP	IL24	NM_006850	human	genbank	54_36p	+1	reviewed	missense	c.87	p.Q29H	0.003	NULL	superfamily_4_helix_cytokine,PatternScan_INTERLEUKIN_10	-	no_errors
CR1	1378	genome.wustl.edu	36	1	205763713	205763713	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	1	205763713	205763713	G	T	SNP	CR1	NM_000651	human	genbank	54_36p	+1	reviewed	missense	c.622	p.V208L	0.075	superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032	superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032	-	no_errors
PLXNA2	5362	genome.wustl.edu	36	1	206273301	206273301	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	1	206273301	206273301	G	T	SNP	PLXNA2	NM_025179	human	genbank	54_36p	-1	reviewed	missense	c.5041	p.L1681I	1.000	HMMPfam_Plexin_cytopl,superfamily_GTPase activation domain GAP	superfamily_Sema domain,HMMPfam_Sema,HMMSmart_SM00630,HMMPfam_PSI,HMMSmart_SM00423,superfamily_Plexin repeat,HMMSmart_SM00429,superfamily_E set domains,HMMPfam_TIG,HMMPfam_Plexin_cytopl,superfamily_GTPase activation domain GAP	-	no_errors
PIP5K3	200576	genome.wustl.edu	36	2	208871627	208871627	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	2	208871627	208871627	A	C	SNP	PIP5K3	NM_015040	human	genbank	54_36p	+1	validated	missense	c.929	p.N310T	1.000	NULL	"superfamily_FYVE/PHD zinc finger,HMMSmart_SM00064,HMMPfam_FYVE,superfamily_""Winged helix"" DNA-binding domain,HMMPfam_DEP,HMMSmart_SM00049,superfamily_GroEL-intermediate domain like,HMMPfam_Cpn60_TCP1,superfamily_GroEL apical domain-like,superfamily_SAICAR synthase-like,HMMSmart_SM00330,HMMPfam_PIP5K"	-	no_errors
USH2A	7399	genome.wustl.edu	36	1	213911102	213911102	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	1	213911102	213911102	C	A	SNP	USH2A	NM_206933	human	genbank	54_36p	-1	reviewed	missense	c.13968	p.L4656F	0.294	HMMSmart_SM00060,HMMPfam_fn3,superfamily_Fibronectin type III	superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00560,HMMSmart_SM00136,HMMPfam_Laminin_N,HMMPfam_Laminin_EGF,HMMSmart_SM00180,superfamily_EGF/Laminin,PatternScan_EGF_LAM_1,PatternScan_EGF_1,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,HMMSmart_SM00282,HMMPfam_Laminin_G_2	-	no_errors
SLC23A3	151295	genome.wustl.edu	36	2	219742517	219742517	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	2	219742517	219742517	G	C	SNP	SLC23A3	NM_144712	human	genbank	54_36p	-1	validated	missense	c.290	p.S97C	0.845	HMMPfam_Xan_ur_permease	HMMPfam_Xan_ur_permease	-	no_errors
UGT1A9	54600	genome.wustl.edu	36	2	234245713	234245713	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	2	234245713	234245713	A	T	SNP	UGT1A9	NM_021027	human	genbank	54_36p	+1	reviewed	nonsense	c.394	p.K132*	0.001	superfamily_UDP-Glycosyltransferase/glycogen phosphorylase,HMMPfam_UDPGT	superfamily_UDP-Glycosyltransferase/glycogen phosphorylase,HMMPfam_UDPGT,PatternScan_UDPGT	-	no_errors
PLEKHA7	144100	genome.wustl.edu	36	11	16767914	16767920	+	Frame_Shift_Del	DEL	CTGCTTT	CTGCTTT	-	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	CTGCTTT	CTGCTTT					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	11	16767914	16767920	CTGCTTT	-	DEL	PLEKHA7	NM_175058	human	genbank	54_36p	-1	provisional	frame_shift_del	c.3140_3134	p.E1045fs	0.974:0.972:0.982:0.976:0.961:0.929:0.939	NULL	superfamily_WW domain,HMMSmart_SM00456,HMMPfam_WW,PatternScan_WW_DOMAIN_1,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	(deletion:cds_exon[16767898,16768001])	no_errors
SMG1	23049	genome.wustl.edu	36	16	18753767	18753769	+	In_Frame_Del	DEL	CTT	CTT	-	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	CTT	CTT					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	16	18753767	18753769	CTT	-	DEL	SMG1	NM_015092	human	genbank	54_36p	-1	reviewed	in_frame_del	c.8278_8276	p.E2759in_frame_del	1.000:1.000:1.000	NULL	superfamily_ARM repeat,HMMPfam_HEAT,superfamily_Protein kinase-like (PK-like),HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,PatternScan_PI3_4_KINASE_2,HMMPfam_FATC	(deletion:cds_exon[18753715,18753987])	no_errors
HLA-80	0	genome.wustl.edu	36	6	30034280	30034294	+	Splice_Site	DEL	GGGACAGTACCCAGG	GGGACAGTACCCAGG	-	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	GGGACAGTACCCAGG	GGGACAGTACCCAGG					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	6	30034280	30034294	GGGACAGTACCCAGG	-	DEL	HLA-80	ENST00000407786	human	ensembl	54_36p	+1	known	splice_site_del	c.NULL	NULL	0.051:0.152:0.703:0.880:0.949:0.974:0.984:0.987:0.986:0.987:0.984:0.975:0.951:0.934:0.879	-	-	(deletion:intron[30034132,30034280], utr_exon[30034281,30034326])	no_coding_region:pseudogene
LOC729042	729042	genome.wustl.edu	36	14	36116777	36116777	+	RNA	DEL	G	G	-	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	14	36116777	36116777	G	-	DEL	LOC729042	XR_015435	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.907	-	-	(deletion:rna[36116372,36116979])	pseudogene
CASK	8573	genome.wustl.edu	36	X	41275272	41275285	+	Frame_Shift_Del	DEL	TCCCATACATCGCA	TCCCATACATCGCA	-	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	TCCCATACATCGCA	TCCCATACATCGCA					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	X	41275272	41275285	TCCCATACATCGCA	-	DEL	CASK	NM_003688	human	genbank	54_36p	-1	validated	frame_shift_del	c.2437_2424	p.A809fs	1.000:1.000:1.000:1.000:0.997:1.000:1.000:1.000:1.000:0.999:0.896:1.000:1.000:1.000	superfamily_SSF52540,HMMSmart_GuKc,HMMPfam_Guanylate_kin	HMMSmart_S_TKc,HMMPfam_Pkinase,superfamily_Kinase_like,superfamily_SSF101288,HMMSmart_L27,HMMPfam_L27,superfamily_PDZ,HMMPfam_PDZ,HMMSmart_PDZ,superfamily_SH3,HMMSmart_SH3,HMMPfam_SH3_2,superfamily_SSF52540,HMMSmart_GuKc,PatternScan_GUANYLATE_KINASE_1,HMMPfam_Guanylate_kin	(deletion:cds_exon[41275204,41275406])	no_errors
FAM75A6	0	genome.wustl.edu	36	9	43567918	43567922	+	Frame_Shift_Del	DEL	AGACA	AGACA	-	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	AGACA	AGACA					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	9	43567918	43567922	AGACA	-	DEL	FAM75A6	ENST00000332857	human	ensembl	54_36p	-1	known	frame_shift_del	c.765_761	p.L254fs	0.000:0.000:0.001:0.000:0.000	NULL	NULL	(deletion:cds_exon[43564651,43568374])	no_errors
JARID1C	8242	genome.wustl.edu	36	X	53256634	53256642	+	In_Frame_Del	DEL	AAGGCTGAG	AAGGCTGAG	-	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	AAGGCTGAG	AAGGCTGAG					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	X	53256634	53256642	AAGGCTGAG	-	DEL	JARID1C	NM_004187	human	genbank	54_36p	-1	reviewed	in_frame_del	c.1532_1524	p.SAF509in_frame_del	1.000:1.000:0.946:1.000:1.000:0.983:1.000:1.000:1.000	HMMSmart_SM00558,HMMPfam_JmjC	HMMSmart_SM00545,HMMPfam_JmjN,superfamily_ARID-like,HMMPfam_ARID,HMMSmart_SM00501,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1,HMMSmart_SM00558,HMMPfam_JmjC,HMMPfam_zf-C5HC2,HMMPfam_PLU-1	(deletion:cds_exon[53256583,53256764])	no_errors
OR6C2	341416	genome.wustl.edu	36	12	54132551	54132551	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	12	54132551	54132551	C	-	DEL	OR6C2	NM_054105	human	genbank	54_36p	+1	provisional	frame_shift_del	c.287	p.S97fs	0.001	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	(deletion:cds_exon[54132265,54133203])	no_errors
LPAR3	23566	genome.wustl.edu	36	1	85052302	85052303	+	In_Frame_Ins	INS	-	-	GAT	novel	unknown	TCGA-24-1844-01A-01W-0639-09	TCGA-24-1844-10A-01W-0639-09	-	-					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	8ac8f7f3-99ca-438c-be13-1f05dec3b794	5a84bd05-0cd8-41bd-bfef-017a0c61c573	1	85052302	85052303	-	GAT	INS	LPAR3	NM_012152	human	genbank	54_36p	-1	reviewed	in_frame_ins	c.877_876	p.292in_frame_insI	1.000:1.000	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
