Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error
MYT1L	23040	genome.wustl.edu	36	2	1885981	1885981	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	2	1885981	1885981	T	C	SNP	MYT1L	NM_015025	human	genbank	54_36p	-1	validated	missense	c.1904	p.E635G	1.000	HMMPfam_MYT1	superfamily_SSF103637,HMMPfam_zf-C2HC,HMMPfam_MYT1,PatternScan_EF_HAND_1	-	no_errors
MYT1L	23040	genome.wustl.edu	36	2	1905521	1905521	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	2	1905521	1905521	C	T	SNP	MYT1L	NM_015025	human	genbank	54_36p	-1	validated	missense	c.1027	p.E343K	1.000	NULL	HMMPfam_zf-C2HC,HMMPfam_MYT1,PatternScan_EF_HAND_1,superfamily_SSF103637	-	no_errors
ASPA	443	genome.wustl.edu	36	17	3326399	3326399	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	17	3326399	3326399	G	T	SNP	ASPA	NM_000049	human	genbank	54_36p	+1	reviewed	missense	c.196	p.D66Y	1.000	HMMPfam_AstE_AspA	HMMPfam_AstE_AspA	-	no_errors
DFFB	1677	genome.wustl.edu	36	1	3778958	3778958	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	1	3778958	3778958	G	T	SNP	DFFB	NM_004402	human	genbank	54_36p	+1	reviewed	missense	c.744	p.E248D	1.000	superfamily_His-Me finger endonucleases,HMMPfam_DFF40	superfamily_CAD  PB1 domains,HMMPfam_CIDE-N,HMMSmart_SM00266,superfamily_His-Me finger endonucleases,HMMPfam_DFF40	-	no_errors
LTBR	4055	genome.wustl.edu	36	12	6364774	6364774	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	12	6364774	6364774	A	T	SNP	LTBR	NM_002342	human	genbank	54_36p	+1	reviewed	missense	c.440	p.D147V	0.015	superfamily_SSF57586,HMMSmart_TNFR	superfamily_SSF57586,HMMPfam_TNFR_c6,HMMSmart_TNFR,PatternScan_TNFR_NGFR_1	-	no_errors
TRIP10	9322	genome.wustl.edu	36	19	6701556	6701556	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	19	6701556	6701556	C	A	SNP	TRIP10	NM_004240	human	genbank	54_36p	+1	validated	missense	c.1401	p.D467E	0.475	superfamily_SH3-domain	HMMPfam_FCH,HMMSmart_SM00055,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326	-	no_errors
FXR2	9513	genome.wustl.edu	36	17	7448070	7448070	+	Silent	SNP	C	T	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	17	7448070	7448070	C	T	SNP	FXR2	ENST00000250113	human	ensembl	54_36p	-1	known	silent	c.282	p.V94	1.000	HMMPfam_Agenet	HMMPfam_Agenet,superfamily_Eukaryotic type KH-domain (KH-domain type I),HMMSmart_SM00322,HMMPfam_KH_1	-	no_errors
TP53	7157	genome.wustl.edu	36	17	7520253	7520253	+	Nonsense_Mutation	SNP	C	T	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	17	7520253	7520253	C	T	SNP	TP53	NM_000546	human	genbank	54_36p	-1	reviewed	nonsense	c.159	p.W53*	0.002	NULL	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors
CAMTA1	23261	genome.wustl.edu	36	1	7623122	7623122	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	1	7623122	7623122	C	A	SNP	CAMTA1	NM_015215	human	genbank	54_36p	+1	validated	missense	c.586	p.L196I	1.000	NULL	HMMPfam_CG-1,superfamily_E set domains,HMMPfam_TIG,superfamily_Ankyrin repeat,HMMPfam_Ank,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_IQ	-	no_errors
PIK3R5	23533	genome.wustl.edu	36	17	8733187	8733187	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	17	8733187	8733187	T	C	SNP	PIK3R5	NM_014308	human	genbank	54_36p	-1	validated	missense	c.889	p.S297G	1.000	HMMPfam_PI3K_1B_p101	HMMPfam_PI3K_1B_p101	-	no_errors
C20orf103	24141	genome.wustl.edu	36	20	9458367	9458367	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	20	9458367	9458367	T	A	SNP	C20orf103	NM_012261	human	genbank	54_36p	+1	validated	missense	c.743	p.V248D	1.000	HMMPfam_Lamp	HMMPfam_Lamp,PatternScan_LAMP_1	-	no_errors
GCM2	9247	genome.wustl.edu	36	6	10983036	10983036	+	Silent	SNP	A	A	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	6	10983036	10983036	A	T	SNP	GCM2	NM_004752	human	genbank	54_36p	-1	reviewed	silent	c.699	p.P233	0.771	NULL	superfamily_GCM_motif,HMMPfam_GCM	-	no_errors
RUNDC2A	84127	genome.wustl.edu	36	16	12053469	12053469	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	16	12053469	12053469	A	G	SNP	RUNDC2A	NM_032167	human	genbank	54_36p	+1	validated	missense	c.1013	p.Q338R	0.991	NULL	HMMPfam_RUN,HMMSmart_SM00593	-	no_errors
SPIRE1	56907	genome.wustl.edu	36	18	12443137	12443137	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	18	12443137	12443137	G	T	SNP	SPIRE1	NM_020148	human	genbank	54_36p	-1	validated	missense	c.1258	p.L420I	1.000	superfamily_FYVE_PHD_ZnF	superfamily_FYVE_PHD_ZnF	-	no_errors
MYOCD	93649	genome.wustl.edu	36	17	12597330	12597330	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	17	12597330	12597330	C	A	SNP	MYOCD	NM_153604	human	genbank	54_36p	+1	provisional	missense	c.2000	p.A667D	0.108	NULL	HMMSmart_SM00707,superfamily_SAP domain,HMMPfam_SAP,HMMSmart_SM00513	-	no_errors
FARSA	2193	genome.wustl.edu	36	19	12894679	12894679	+	Silent	SNP	G	G	C	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	19	12894679	12894679	G	C	SNP	FARSA	NM_004461	human	genbank	54_36p	-1	validated	silent	c.1410	p.G470	1.000	superfamily_Class II aaRS and biotin synthetases,HMMPfam_tRNA-synt_2d	"superfamily_""Winged helix"" DNA-binding domain,superfamily_Class II aaRS and biotin synthetases,HMMPfam_tRNA-synt_2d"	-	no_errors
C18orf1	753	genome.wustl.edu	36	18	13428331	13428331	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	18	13428331	13428331	C	G	SNP	C18orf1	NM_181481	human	genbank	54_36p	+1	validated	missense	c.129	p.D43E	1.000	superfamily_LDL receptor-like module,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1	superfamily_LDL receptor-like module,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1	-	no_errors
SLC1A6	6511	genome.wustl.edu	36	19	14924751	14924751	+	Silent	SNP	C	A	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	19	14924751	14924751	C	A	SNP	SLC1A6	NM_005071	human	genbank	54_36p	-1	provisional	silent	c.1488	p.V496	1.000	HMMPfam_SDF	HMMPfam_SDF,PatternScan_NA_DICARBOXYL_SYMP_1,PatternScan_NA_DICARBOXYL_SYMP_2	-	no_errors
C20orf23	55614	genome.wustl.edu	36	20	16296419	16296419	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	20	16296419	16296419	C	A	SNP	C20orf23	ENST00000408042	human	ensembl	54_36p	-1	known	missense	c.3551	p.C1184F	0.000	NULL	HMMSmart_KISc,superfamily_SSF52540,HMMPfam_Kinesin,PatternScan_KINESIN_MOTOR_DOMAIN1,PatternScan_LECTIN_LEGUME_BETA,superfamily_SMAD_FHA,HMMSmart_FHA,HMMPfam_FHA	-	no_errors
AHR	196	genome.wustl.edu	36	7	17316129	17316129	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	7	17316129	17316129	A	C	SNP	AHR	NM_001621	human	genbank	54_36p	+1	reviewed	missense	c.110	p.K37T	1.000	HMMSmart_SM00353,HMMPfam_HLH	HMMSmart_SM00353,HMMPfam_HLH,HMMSmart_SM00091,HMMPfam_PAS,superfamily_PYP-like sensor domain (PAS domain),HMMPfam_PAS_3,HMMSmart_SM00086	-	no_errors
BEND2	139105	genome.wustl.edu	36	X	18144737	18144737	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	X	18144737	18144737	G	T	SNP	BEND2	NM_153346	human	genbank	54_36p	-1	validated	missense	c.63	p.N21K	0.000	NULL	HMMPfam_BEN	-	no_errors
RNF112	7732	genome.wustl.edu	36	17	19256497	19256497	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	17	19256497	19256497	G	C	SNP	RNF112	ENST00000299604	human	ensembl	54_36p	+1	known	missense	c.189	p.R63S	0.006	superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4	superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_GBP	-	no_errors
SERPIND1	3053	genome.wustl.edu	36	22	19464129	19464129	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	22	19464129	19464129	G	C	SNP	SERPIND1	NM_000185	human	genbank	54_36p	+1	reviewed	missense	c.529	p.V177L	0.964	superfamily_Serpins,HMMPfam_Serpin,HMMSmart_SM00093	PatternScan_TONB_DEPENDENT_REC_1,superfamily_Serpins,HMMPfam_Serpin,HMMSmart_SM00093,PatternScan_SERPIN	-	no_errors
IMAA	387254	genome.wustl.edu	36	16	21439018	21439018	+	RNA	SNP	G	A	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	16	21439018	21439018	G	A	SNP	IMAA	NR_002594	human	genbank	54_36p	-1	predicted	rna	NULL	NULL	1.000	-	-	-	pseudogene
LOC100132820	0	genome.wustl.edu	36	17	21828266	21828266	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	17	21828266	21828266	T	G	SNP	LOC100132820	XM_001716790	human	genbank	54_36p	+1	model	missense	c.2	p.M1R	0.000	NULL	NULL	-	no_errors
OCA2	4948	genome.wustl.edu	36	15	25933636	25933636	+	Nonsense_Mutation	SNP	G	A	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	15	25933636	25933636	G	A	SNP	OCA2	NM_000275	human	genbank	54_36p	-1	reviewed	nonsense	c.925	p.Q309*	0.998	NULL	HMMPfam_CitMHS	-	no_errors
SLC17A2	10246	genome.wustl.edu	36	6	26029461	26029461	+	Silent	SNP	G	G	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	6	26029461	26029461	G	T	SNP	SLC17A2	NM_005835	human	genbank	54_36p	-1	provisional	silent	c.399	p.T133	0.999	superfamily_MFS_gen_substrate_transporter,HMMPfam_MFS_1	superfamily_MFS_gen_substrate_transporter,HMMPfam_MFS_1	-	no_errors
PTCHD3	374308	genome.wustl.edu	36	10	27732193	27732193	+	Silent	SNP	C	C	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	10	27732193	27732193	C	T	SNP	PTCHD3	NM_001034842	human	genbank	54_36p	-1	validated	silent	c.1311	p.G437	0.971	HMMPfam_Patched,superfamily_Multidrug efflux transporter AcrB transmembrane domain	HMMPfam_Patched,superfamily_Multidrug efflux transporter AcrB transmembrane domain	-	no_errors
PTCHD3	374308	genome.wustl.edu	36	10	27732279	27732279	+	Silent	SNP	G	G	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	10	27732279	27732279	G	T	SNP	PTCHD3	NM_001034842	human	genbank	54_36p	-1	validated	silent	c.1225	p.R409	0.002	HMMPfam_Patched,superfamily_Multidrug efflux transporter AcrB transmembrane domain	HMMPfam_Patched,superfamily_Multidrug efflux transporter AcrB transmembrane domain	-	no_errors
TMEM98	26022	genome.wustl.edu	36	17	28284359	28284359	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	17	28284359	28284359	A	C	SNP	TMEM98	NM_001033504	human	genbank	54_36p	+1	validated	missense	c.186	p.L62F	0.999	NULL	NULL	-	no_errors
OR10C1	442194	genome.wustl.edu	36	6	29515883	29515883	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	6	29515883	29515883	G	C	SNP	OR10C1	NM_013941	human	genbank	54_36p	+1	provisional	missense	c.112	p.V38L	0.001	superfamily_SSF81321	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
KCNA4	3739	genome.wustl.edu	36	11	29989976	29989976	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	11	29989976	29989976	C	A	SNP	KCNA4	NM_002233	human	genbank	54_36p	-1	reviewed	missense	c.826	p.V276L	1.000	HMMSmart_SM00225	HMMPfam_K_channel_TID,superfamily_POZ domain,HMMSmart_SM00225,HMMPfam_K_tetra,superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	-	no_errors
FBXL19	54620	genome.wustl.edu	36	16	30849066	30849066	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	16	30849066	30849066	C	G	SNP	FBXL19	NM_001099784	human	genbank	54_36p	+1	provisional	missense	c.1021	p.L341V	0.971	NULL	HMMPfam_zf-CXXC,HMMSmart_SM00249,PatternScan_ZF_PHD_1,HMMSmart_SM00256,HMMPfam_F-box,superfamily_RNI-like,HMMSmart_SM00367	-	no_errors
LOC100128783	0	genome.wustl.edu	36	5	31229629	31229629	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	5	31229629	31229629	C	G	SNP	LOC100128783	XM_001717030	human	genbank	54_36p	+1	model	missense	c.131	p.A44G	1.000	NULL	NULL	-	no_errors
DENND5B	160518	genome.wustl.edu	36	12	31431983	31431983	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	12	31431983	31431983	G	A	SNP	DENND5B	NM_144973	human	genbank	54_36p	-1	validated	missense	c.3646	p.R1216C	1.000	HMMSmart_SM00593	HMMPfam_uDENN,HMMSmart_SM00800,HMMPfam_DENN,HMMSmart_SM00799,HMMPfam_dDENN,HMMSmart_SM00801,HMMPfam_RUN,HMMSmart_SM00593,superfamily_Lipase/lipooxygenase domain (PLAT/LH2 domain),HMMPfam_PLAT	-	no_errors
C2	717	genome.wustl.edu	36	6	32013126	32013126	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	6	32013126	32013126	A	G	SNP	C2	NM_000063	human	genbank	54_36p	+1	reviewed	missense	c.1040	p.Y347C	0.077	superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA	superfamily_Complement control module/SCR domain,HMMSmart_SM00032,HMMPfam_Sushi,superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA,superfamily_Trypsin-like serine proteases,HMMSmart_SM00020,HMMPfam_Trypsin,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	-	no_errors
PFDN6	10471	genome.wustl.edu	36	6	33372588	33372588	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	6	33372588	33372588	C	G	SNP	PFDN6	ENST00000395134	human	ensembl	54_36p	+1	known	missense	c.265	p.L89V	0.037	HMMPfam_Prefoldin_2	superfamily_Prefoldin,HMMPfam_Prefoldin_2	-	no_errors
ZSCAN20	7579	genome.wustl.edu	36	1	33727705	33727705	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	1	33727705	33727705	G	T	SNP	ZSCAN20	NM_145238	human	genbank	54_36p	+1	validated	nonsense	c.682	p.E228*	0.956	NULL	HMMPfam_SCAN,HMMSmart_SM00431,HMMSmart_SM00717,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
NR1D1	9572	genome.wustl.edu	36	17	35509862	35509862	+	Silent	SNP	C	C	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	17	35509862	35509862	C	T	SNP	NR1D1	NM_021724	human	genbank	54_36p	-1	provisional	silent	c.12	p.L4	0.997	NULL	HMMSmart_ZnF_C4,HMMPfam_zf-C4,superfamily_SSF57716,PatternScan_NUCLEAR_REC_DBD_1,superfamily_Str_ncl_receptor,HMMSmart_HOLI,HMMPfam_Hormone_recep	-	no_errors
TESK1	7016	genome.wustl.edu	36	9	35596004	35596004	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	9	35596004	35596004	A	T	SNP	TESK1	NM_006285	human	genbank	54_36p	+1	reviewed	missense	c.243	p.Q81H	1.000	superfamily_Kinase_like,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP	superfamily_Kinase_like,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR	-	no_errors
EIF3L	51386	genome.wustl.edu	36	22	36603918	36603918	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	22	36603918	36603918	C	G	SNP	EIF3L	NM_016091	human	genbank	54_36p	+1	validated	missense	c.1369	p.L457V	1.000	HMMPfam_Paf67	HMMPfam_Paf67	-	no_errors
ANKRD30A	91074	genome.wustl.edu	36	10	37526401	37526401	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	10	37526401	37526401	A	C	SNP	ANKRD30A	NM_052997	human	genbank	54_36p	+1	validated	missense	c.2535	p.Q845H	0.002	NULL	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank,PatternScan_ASP_PROTEASE	-	no_errors
RPUSD2	27079	genome.wustl.edu	36	15	38651129	38651129	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	15	38651129	38651129	A	G	SNP	RPUSD2	NM_152260	human	genbank	54_36p	+1	provisional	missense	c.641	p.H214R	1.000	superfamily_PsdUridine_synth_cat_dom	superfamily_PsdUridine_synth_cat_dom,HMMPfam_PseudoU_synth_2,PatternScan_PSI_RLU	-	no_errors
FAM183B	340286	genome.wustl.edu	36	7	38692067	38692067	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	7	38692067	38692067	C	T	SNP	FAM183B	NM_001105282	human	genbank	54_36p	-1	validated	missense	c.64	p.E22K	0.989	NULL	NULL	-	no_errors
SLC4A1	6521	genome.wustl.edu	36	17	39686109	39686109	+	Silent	SNP	G	G	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	17	39686109	39686109	G	T	SNP	SLC4A1	NM_000342	human	genbank	54_36p	-1	reviewed	silent	c.2214	p.L738	0.996	HMMPfam_HCO3_cotransp	superfamily_PTrfase/Anion_transptr,HMMPfam_Band_3_cyto,HMMPfam_HCO3_cotransp,PatternScan_ANION_EXCHANGER_1,PatternScan_ANION_EXCHANGER_2	-	no_errors
C19orf46	163183	genome.wustl.edu	36	19	41189298	41189298	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	19	41189298	41189298	G	T	SNP	C19orf46	NM_001039876	human	genbank	54_36p	-1	validated	missense	c.734	p.T245K	0.973	NULL	HMMPfam_KASH	-	no_errors
SCRN2	90507	genome.wustl.edu	36	17	43270750	43270750	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	17	43270750	43270750	G	C	SNP	SCRN2	NM_138355	human	genbank	54_36p	-1	validated	missense	c.1004	p.T335S	1.000	NULL	NULL	-	no_errors
MGC42105	167359	genome.wustl.edu	36	5	43316124	43316124	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	5	43316124	43316124	A	T	SNP	MGC42105	NM_153361	human	genbank	54_36p	+1	provisional	missense	c.847	p.I283F	1.000	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors
KIAA0467	23334	genome.wustl.edu	36	1	43680875	43680875	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	1	43680875	43680875	A	C	SNP	KIAA0467	NM_015284	human	genbank	54_36p	+1	predicted	missense	c.5453	p.K1818T	0.998	NULL	NULL	-	no_errors
POLD2	5425	genome.wustl.edu	36	7	44121451	44121451	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	7	44121451	44121451	T	C	SNP	POLD2	NM_006230	human	genbank	54_36p	-1	validated	missense	c.1217	p.N406S	1.000	HMMPfam_DNA_pol_E_B	HMMPfam_DNA_pol_E_B	-	no_errors
SLC6A9	6536	genome.wustl.edu	36	1	44240891	44240891	+	Silent	SNP	C	C	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	1	44240891	44240891	C	T	SNP	SLC6A9	NM_201649	human	genbank	54_36p	-1	validated	silent	c.957	p.T319	0.991	HMMPfam_SNF	HMMPfam_SNF,PatternScan_NA_NEUROTRAN_SYMP_1,PatternScan_NA_NEUROTRAN_SYMP_2	-	no_errors
uc002oly.1	0	genome.wustl.edu	36	19	44701447	44701447	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	19	44701447	44701447	A	T	SNP	uc002oly.1	ENST00000335426	human	ensembl	54_36p	+1	known	missense	c.953	p.H318L	0.997	NULL	NULL	-	no_errors
CSE1L	1434	genome.wustl.edu	36	20	47120217	47120217	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	20	47120217	47120217	G	C	SNP	CSE1L	NM_001316	human	genbank	54_36p	+1	reviewed	missense	c.744	p.L248F	1.000	superfamily_ARM repeat,HMMPfam_Cse1	superfamily_ARM repeat,HMMPfam_IBN_N,HMMPfam_Cse1,HMMPfam_CAS_CSE1	-	no_errors
ZNF859P	0	genome.wustl.edu	36	1	50084412	50084412	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	1	50084412	50084412	C	A	SNP	ZNF859P	ENST00000401053	human	ensembl	54_36p	+1	known	missense	c.1166	p.P389H	0.994	superfamily_C2H2 and C2HC zinc fingers	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_start_codon
KIAA1370	56204	genome.wustl.edu	36	15	50689495	50689495	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	15	50689495	50689495	C	T	SNP	KIAA1370	NM_019600	human	genbank	54_36p	-1	validated	missense	c.908	p.G303D	0.223	NULL	NULL	-	no_errors
MTMR4	9110	genome.wustl.edu	36	17	53936489	53936489	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	17	53936489	53936489	C	T	SNP	MTMR4	NM_004687	human	genbank	54_36p	-1	validated	missense	c.1577	p.R526Q	1.000	superfamily_(Phosphotyrosine protein) phosphatases II	superfamily_PH domain-like,superfamily_(Phosphotyrosine protein) phosphatases II,HMMPfam_Myotub-related,PatternScan_TYR_PHOSPHATASE_1,HMMSmart_SM00064,HMMPfam_FYVE,superfamily_FYVE/PHD zinc finger	-	no_errors
FIP1L1	81608	genome.wustl.edu	36	4	53951501	53951501	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	4	53951501	53951501	C	G	SNP	FIP1L1	NM_030917	human	genbank	54_36p	+1	reviewed	missense	c.454	p.L152V	0.998	NULL	HMMPfam_Fip1	-	no_errors
LHB	3972	genome.wustl.edu	36	19	54211284	54211284	+	Silent	SNP	C	C	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	19	54211284	54211284	C	T	SNP	LHB	NM_000894	human	genbank	54_36p	-1	reviewed	silent	c.279	p.P93	0.481	HMMSmart_GHB,HMMPfam_Cys_knot,superfamily_SSF57501	HMMSmart_GHB,HMMPfam_Cys_knot,superfamily_SSF57501,PatternScan_GLYCO_HORMONE_BETA_1,PatternScan_GLYCO_HORMONE_BETA_2	-	no_errors
TMEM61	199964	genome.wustl.edu	36	1	55224493	55224493	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	1	55224493	55224493	G	T	SNP	TMEM61	NM_182532	human	genbank	54_36p	+1	provisional	missense	c.151	p.A51S	0.013	NULL	NULL	-	no_errors
KLK3	354	genome.wustl.edu	36	19	56053340	56053340	+	Silent	SNP	C	C	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	19	56053340	56053340	C	A	SNP	KLK3	NM_001648	human	genbank	54_36p	+1	reviewed	silent	c.450	p.T150	0.012	superfamily_Trypsin-like serine proteases,HMMSmart_SM00020,HMMPfam_Trypsin	superfamily_Trypsin-like serine proteases,HMMSmart_SM00020,HMMPfam_Trypsin,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	-	no_errors
ZNF160	90338	genome.wustl.edu	36	19	58264237	58264237	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	19	58264237	58264237	C	G	SNP	ZNF160	NM_001102603	human	genbank	54_36p	-1	reviewed	missense	c.1362	p.K454N	0.007	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
TLN2	83660	genome.wustl.edu	36	15	60898786	60898786	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	15	60898786	60898786	C	G	SNP	TLN2	NM_015059	human	genbank	54_36p	+1	reviewed	missense	c.6790	p.P2264A	0.997	NULL	PatternScan_FERM_1,HMMSmart_B41,HMMPfam_FERM_N,superfamily_FERM_3-hlx,HMMPfam_FERM_M,PatternScan_FERM_2,superfamily_SSF50729,superfamily_Talin_cent,HMMPfam_Talin_middle,superfamily_SSF109885,HMMPfam_VBS,HMMSmart_ILWEQ,HMMPfam_I_LWEQ	-	no_errors
ANK3	288	genome.wustl.edu	36	10	61538627	61538627	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	10	61538627	61538627	A	C	SNP	ANK3	NM_020987	human	genbank	54_36p	-1	reviewed	missense	c.3140	p.V1047G	1.000	HMMPfam_ZU5,HMMSmart_ZU5	superfamily_ANK,HMMPfam_Ank,HMMSmart_ANK,HMMPfam_ZU5,HMMSmart_ZU5,superfamily_DEATH_like,HMMSmart_DEATH,HMMPfam_Death	-	no_errors
DOCK7	85440	genome.wustl.edu	36	1	62892378	62892378	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	1	62892378	62892378	T	A	SNP	DOCK7	NM_033407	human	genbank	54_36p	-1	validated	missense	c.185	p.D62V	1.000	NULL	HMMPfam_Ded_cyto	-	no_errors
SGPP1	81537	genome.wustl.edu	36	14	63222851	63222851	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	14	63222851	63222851	G	A	SNP	SGPP1	NM_030791	human	genbank	54_36p	-1	provisional	missense	c.1051	p.P351S	1.000	NULL	superfamily_Acid phosphatase/Vanadium-dependent haloperoxidase,HMMPfam_PAP2,HMMSmart_SM00014	-	no_errors
C17orf58	284018	genome.wustl.edu	36	17	63419684	63419684	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	17	63419684	63419684	C	T	SNP	C17orf58	NM_181655	human	genbank	54_36p	-1	validated	missense	c.41	p.R14Q	1.000	superfamily_TIMP-like	superfamily_TIMP-like	-	no_errors
PHF3	23469	genome.wustl.edu	36	6	64452604	64452604	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	6	64452604	64452604	C	A	SNP	PHF3	NM_015153	human	genbank	54_36p	+1	provisional	missense	c.1022	p.S341Y	0.002	NULL	superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1,superfamily_Elongation factor TFIIS domain 2,HMMPfam_TFIIS_M,HMMSmart_SM00510,HMMPfam_SPOC	-	no_errors
SPTBN2	6712	genome.wustl.edu	36	11	66217123	66217123	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	11	66217123	66217123	C	A	SNP	SPTBN2	NM_006946	human	genbank	54_36p	-1	validated	missense	c.4879	p.V1627L	1.000	superfamily_Spectrin repeat,HMMPfam_Spectrin,HMMSmart_SM00150	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_SM00033,PatternScan_ACTININ_2,superfamily_Spectrin repeat,HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	-	no_errors
NIP7	51388	genome.wustl.edu	36	16	67932985	67932985	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	16	67932985	67932985	C	T	SNP	NIP7	NM_016101	human	genbank	54_36p	+1	validated	missense	c.472	p.P158S	1.000	HMMSmart_SM00359,superfamily_PUA domain-like	superfamily_Pre-PUA domain,HMMSmart_SM00359,superfamily_PUA domain-like	-	no_errors
IGHMBP2	3508	genome.wustl.edu	36	11	68460289	68460289	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	11	68460289	68460289	G	A	SNP	IGHMBP2	NM_002180	human	genbank	54_36p	+1	reviewed	missense	c.1765	p.G589S	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMSmart_SM00382,HMMSmart_SM00393,superfamily_R3H domain,HMMPfam_R3H,HMMSmart_SM00154	-	no_errors
CTNNA3	29119	genome.wustl.edu	36	10	68951646	68951646	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	10	68951646	68951646	T	A	SNP	CTNNA3	NM_013266	human	genbank	54_36p	-1	validated	missense	c.539	p.E180V	1.000	HMMPfam_Vinculin,superfamily_alpha-catenin/vinculin	HMMPfam_Vinculin,superfamily_alpha-catenin/vinculin	-	no_errors
PTPRB	5787	genome.wustl.edu	36	12	69272520	69272520	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	12	69272520	69272520	C	G	SNP	PTPRB	NM_001109754	human	genbank	54_36p	-1	reviewed	missense	c.1589	p.R530T	1.000	superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	superfamily_Ricin B-like lectins,HMMPfam_Ricin_B_lectin,HMMSmart_SM00060,HMMPfam_fn3,superfamily_Fibronectin type III,superfamily_(Phosphotyrosine protein) phosphatases II,HMMSmart_SM00194,HMMPfam_Y_phosphatase,HMMSmart_SM00404,PatternScan_TYR_PHOSPHATASE_1	-	no_errors
MYO9A	4649	genome.wustl.edu	36	15	69959887	69959887	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	15	69959887	69959887	A	C	SNP	MYO9A	NM_006901	human	genbank	54_36p	-1	validated	missense	c.5465	p.F1822C	0.967	NULL	HMMPfam_RA,HMMSmart_SM00314,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head,HMMSmart_SM00015,HMMPfam_IQ,superfamily_Cysteine-rich domain,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP	-	no_errors
ZNF236	7776	genome.wustl.edu	36	18	72721154	72721154	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	18	72721154	72721154	A	T	SNP	ZNF236	NM_007345	human	genbank	54_36p	+1	validated	missense	c.1076	p.Q359L	1.000	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
TRPA1	8989	genome.wustl.edu	36	8	73121302	73121302	+	Silent	SNP	G	G	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	8	73121302	73121302	G	A	SNP	TRPA1	NM_007332	human	genbank	54_36p	-1	reviewed	silent	c.2061	p.N687	1.000	NULL	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank,PatternScan_EF_HAND_1,HMMPfam_Ion_trans	-	no_errors
C1orf173	127254	genome.wustl.edu	36	1	74887565	74887565	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	1	74887565	74887565	G	A	SNP	C1orf173	NM_001002912	human	genbank	54_36p	-1	predicted	missense	c.46	p.L16F	1.000	NULL	NULL	-	no_errors
PMS2L3	5387	genome.wustl.edu	36	7	74983057	74983057	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	7	74983057	74983057	C	T	SNP	PMS2L3	NM_005395	human	genbank	54_36p	-1	validated	missense	c.175	p.G59R	0.088	superfamily_Krueppel-associated_box,HMMSmart_KRAB	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_ATP_bd_ATPase,HMMPfam_HATPase_c	-	no_errors
SEC24C	9632	genome.wustl.edu	36	10	75181009	75181009	+	Splice_Site	SNP	T	T	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	10	75181009	75181009	T	A	SNP	SEC24C	NM_004922	human	genbank	54_36p	+1	reviewed	splice_site	c.308+2	e2+2	1.000	-	-	-	no_errors
CHCHD1	118487	genome.wustl.edu	36	10	75211902	75211902	+	Silent	SNP	G	G	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	10	75211902	75211902	G	A	SNP	CHCHD1	NM_203298	human	genbank	54_36p	+1	validated	silent	c.63	p.L21	0.998	HMMPfam_Coil_helix	HMMPfam_Coil_helix	-	no_errors
ADAMTS7	11173	genome.wustl.edu	36	15	76838856	76838856	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	15	76838856	76838856	C	A	SNP	ADAMTS7	NM_014272	human	genbank	54_36p	-1	reviewed	missense	c.5023	p.A1675S	0.002	NULL	"HMMPfam_Pep_M12B_propep,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Reprolysin,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMPfam_ADAM_spacer1"	-	no_errors
RASGRF1	5923	genome.wustl.edu	36	15	77128973	77128973	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	15	77128973	77128973	G	A	SNP	RASGRF1	NM_002891	human	genbank	54_36p	-1	reviewed	missense	c.544	p.L182F	0.990	NULL	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,HMMPfam_IQ,superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,PatternScan_DH_1,superfamily_Ras GEF,HMMSmart_SM00229,HMMPfam_RasGEF_N,HMMSmart_SM00147,HMMPfam_RasGEF,PatternScan_RASGEF	-	no_errors
IFI44L	10964	genome.wustl.edu	36	1	78866324	78866324	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	1	78866324	78866324	C	T	SNP	IFI44L	NM_006820	human	genbank	54_36p	+1	validated	missense	c.19	p.R7C	0.000	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ANTXR2	118429	genome.wustl.edu	36	4	81159082	81159082	+	Silent	SNP	T	T	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	4	81159082	81159082	T	A	SNP	ANTXR2	NM_058172	human	genbank	54_36p	-1	reviewed	silent	c.939	p.T313	0.997	HMMPfam_Anth_Ig	superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA,HMMPfam_Anth_Ig,HMMPfam_Ant_C	-	no_errors
ANTXR2	118429	genome.wustl.edu	36	4	81212667	81212667	+	Silent	SNP	G	G	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	4	81212667	81212667	G	A	SNP	ANTXR2	NM_058172	human	genbank	54_36p	-1	reviewed	silent	c.72	p.L24	0.000	NULL	HMMPfam_VWA,HMMSmart_SM00327,HMMPfam_Ant_C,HMMPfam_Anth_Ig,superfamily_vWA-like	-	no_errors
RPS23	6228	genome.wustl.edu	36	5	81609905	81609905	+	Silent	SNP	G	A	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	5	81609905	81609905	G	A	SNP	RPS23	ENST00000296674	human	ensembl	54_36p	-1	known	silent	c.90	p.A30	0.199	NULL	HMMPfam_Ribosomal_S12,superfamily_Nucleic acid-binding proteins,PatternScan_RIBOSOMAL_S12	-	no_start_codon
PRKG2	5593	genome.wustl.edu	36	4	82250760	82250760	+	Silent	SNP	C	C	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	4	82250760	82250760	C	A	SNP	PRKG2	NM_006259	human	genbank	54_36p	-1	provisional	silent	c.1806	p.G602	0.564	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase	superfamily_cNMP_binding,HMMSmart_cNMP,HMMPfam_cNMP_binding,PatternScan_CNMP_BINDING_1,PatternScan_CNMP_BINDING_2,superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,HMMSmart_S_TK_X	-	no_errors
NTRK3	4916	genome.wustl.edu	36	15	86479629	86479629	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	15	86479629	86479629	G	A	SNP	NTRK3	NM_001012338	human	genbank	54_36p	-1	reviewed	missense	c.911	p.P304L	1.000	superfamily_Immunoglobulin	HMMPfam_LRRNT,HMMSmart_SM00013,superfamily_L domain-like,HMMPfam_LRR_1,HMMSmart_SM00082,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMPfam_ig,HMMPfam_I-set,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR,PatternScan_RECEPTOR_TYR_KIN_II	-	no_errors
WDR21C	138009	genome.wustl.edu	36	8	88954233	88954233	+	Silent	SNP	G	G	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	8	88954233	88954233	G	A	SNP	WDR21C	NM_152418	human	genbank	54_36p	-1	validated	silent	c.1083	p.N361	0.003	superfamily_WD40_like	PatternScan_WD_REPEATS_1,superfamily_WD40_like,HMMSmart_WD40,HMMPfam_WD40	-	no_errors
HSP90B3P	343477	genome.wustl.edu	36	1	91881824	91881824	+	Silent	SNP	A	A	G	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	1	91881824	91881824	A	G	SNP	HSP90B3P	ENST00000370405	human	ensembl	54_36p	+1	known	silent	c.1263	p.A421	0.994	HMMPfam_HSP90,superfamily_SSF110942	HMMPfam_HSP90,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_SSF110942	-	no_errors
C1orf146	388649	genome.wustl.edu	36	1	92469582	92469582	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	1	92469582	92469582	A	T	SNP	C1orf146	NM_001012425	human	genbank	54_36p	+1	validated	missense	c.17	p.K6I	0.623	NULL	NULL	-	no_errors
SAMD9L	219285	genome.wustl.edu	36	7	92600545	92600545	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	7	92600545	92600545	C	T	SNP	SAMD9L	NM_152703	human	genbank	54_36p	-1	validated	missense	c.2676	p.M892I	1.000	NULL	superfamily_SAM/Pointed domain	-	no_errors
HEPHL1	341208	genome.wustl.edu	36	11	93394213	93394213	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	11	93394213	93394213	T	A	SNP	HEPHL1	NM_001098672	human	genbank	54_36p	+1	validated	missense	c.31	p.F11I	0.088	NULL	superfamily_Cupredoxin,HMMPfam_Cu-oxidase_3,HMMPfam_Cu-oxidase_2,PatternScan_MULTICOPPER_OXIDASE1,PatternScan_MULTICOPPER_OXIDASE2	-	no_errors
TRRAP	8295	genome.wustl.edu	36	7	98372746	98372746	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	7	98372746	98372746	G	T	SNP	TRRAP	NM_003496	human	genbank	54_36p	+1	validated	missense	c.4143	p.Q1381H	1.000	superfamily_ARM repeat	superfamily_ARM repeat,PatternScan_COPPER_BLUE,superfamily_Protein prenylyltransferase,HMMPfam_FAT,superfamily_TPR-like,superfamily_Protein kinase-like (PK-like),HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,HMMPfam_FATC	-	no_errors
LRRK1	79705	genome.wustl.edu	36	15	99382638	99382638	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	15	99382638	99382638	C	A	SNP	LRRK1	NM_024652	human	genbank	54_36p	+1	validated	missense	c.2175	p.N725K	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Miro	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank,superfamily_L domain-like,HMMSmart_SM00364,HMMSmart_SM00369,HMMPfam_LRR_1,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Miro,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMPfam_Pkinase,HMMSmart_SM00220	-	no_errors
CORO2A	7464	genome.wustl.edu	36	9	99959681	99959681	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	9	99959681	99959681	G	A	SNP	CORO2A	NM_003389	human	genbank	54_36p	-1	reviewed	missense	c.83	p.S28F	0.993	HMMPfam_DUF1899	HMMPfam_DUF1899,superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_WD_REPEATS_1,HMMPfam_DUF1900,PatternScan_GLNA_1	-	no_errors
NXF2B	728343	genome.wustl.edu	36	X	101511225	101511225	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	X	101511225	101511225	G	A	SNP	NXF2B	NM_001099686	human	genbank	54_36p	-1	inferred	missense	c.322	p.P108S	0.000	NULL	superfamily_SSF54928,HMMPfam_Tap-RNA_bind,superfamily_SSF52058,superfamily_SSF54427,HMMPfam_NTF2,superfamily_UBA_like,HMMSmart_TAP_C,HMMPfam_TAP_C	-	no_errors
MMP27	64066	genome.wustl.edu	36	11	102072700	102072700	+	Silent	SNP	G	G	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	11	102072700	102072700	G	A	SNP	MMP27	NM_022122	human	genbank	54_36p	-1	reviewed	silent	c.696	p.A232	0.976	"HMMSmart_SM00235,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Peptidase_M10"	"HMMPfam_PG_binding_1,superfamily_PGBD-like,PatternScan_CYSTEINE_SWITCH,HMMSmart_SM00235,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Peptidase_M10,PatternScan_ZINC_PROTEASE,superfamily_Hemopexin-like domain,HMMPfam_Hemopexin,HMMSmart_SM00120,PatternScan_HEMOPEXIN"	-	no_errors
LRP12	29967	genome.wustl.edu	36	8	105579132	105579132	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	8	105579132	105579132	T	C	SNP	LRP12	NM_013437	human	genbank	54_36p	-1	reviewed	missense	c.824	p.Y275C	1.000	superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042	superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042,superfamily_LDL receptor-like module,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1	-	no_errors
CELSR2	1952	genome.wustl.edu	36	1	109607361	109607361	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	1	109607361	109607361	G	A	SNP	CELSR2	NM_001408	human	genbank	54_36p	+1	reviewed	missense	c.4783	p.A1595T	0.955	HMMSmart_EGF,HMMPfam_EGF,PatternScan_ASX_HYDROXYL,superfamily_ConA_like_lec_gl	PatternScan_G_PROTEIN_RECEP_F2_1,PatternScan_G_PROTEIN_RECEP_F2_2,superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,superfamily_SSF57196,HMMSmart_EGF,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_EGF_CA,superfamily_ConA_like_lec_gl,HMMSmart_LamG,HMMPfam_Laminin_G_2,PatternScan_ASX_HYDROXYL,HMMSmart_TNFR,HMMPfam_Laminin_EGF,HMMSmart_EGF_Lam,PatternScan_EGF_LAM_1,HMMSmart_HormR,HMMPfam_HRM,HMMPfam_GPS,HMMSmart_GPS,HMMPfam_7tm_2	-	no_errors
AMIGO1	57463	genome.wustl.edu	36	1	109851650	109851650	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	1	109851650	109851650	C	G	SNP	AMIGO1	NM_020703	human	genbank	54_36p	-1	validated	missense	c.1408	p.G470R	0.175	NULL	superfamily_SSF52058,HMMSmart_LRRNT,HMMSmart_LRR_TYP,HMMPfam_LRR_1,HMMSmart_LRRCT,superfamily_SSF48726,HMMSmart_IG,HMMPfam_ig	-	no_errors
DCX	1641	genome.wustl.edu	36	X	110530911	110530911	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	X	110530911	110530911	C	T	SNP	DCX	NM_000555	human	genbank	54_36p	-1	reviewed	missense	c.911	p.G304E	1.000	superfamily_Doublecortin (DC),HMMSmart_SM00537,HMMPfam_DCX	superfamily_Doublecortin (DC),HMMSmart_SM00537,HMMPfam_DCX	-	no_errors
SLC16A10	117247	genome.wustl.edu	36	6	111634611	111634611	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	6	111634611	111634611	G	T	SNP	SLC16A10	NM_018593	human	genbank	54_36p	+1	validated	missense	c.1066	p.V356L	1.000	superfamily_MFS_gen_substrate_transporter,HMMPfam_MFS_1	superfamily_MFS_gen_substrate_transporter,HMMPfam_MFS_1	-	no_errors
NCAM1	4684	genome.wustl.edu	36	11	112638845	112638845	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	11	112638845	112638845	T	C	SNP	NCAM1	NM_001076682	human	genbank	54_36p	+1	validated	missense	c.2275	p.F759L	0.869	NULL	NULL	-	pseudogene:no_stop_codon:bad_bp_length_for_coding_region
CIT	11113	genome.wustl.edu	36	12	118624114	118624114	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	12	118624114	118624114	G	C	SNP	CIT	NM_007174	human	genbank	54_36p	-1	validated	missense	c.5211	p.I1737M	1.000	HMMSmart_SM00036,HMMPfam_CNH	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,HMMSmart_SM00133,HMMPfam_Pkinase_C,PatternScan_CPSASE_2,superfamily_Cysteine-rich domain,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,HMMSmart_SM00036,HMMPfam_CNH	-	no_errors
ASTN2	23245	genome.wustl.edu	36	9	118777345	118777345	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	9	118777345	118777345	T	G	SNP	ASTN2	NM_198187	human	genbank	54_36p	-1	validated	missense	c.1852	p.T618P	1.000	NULL	superfamily_EGF/Laminin,HMMSmart_SM00457,superfamily_Fibronectin type III,HMMPfam_fn3	-	no_errors
OASL	8638	genome.wustl.edu	36	12	119942989	119942989	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	12	119942989	119942989	G	A	SNP	OASL	NM_003733	human	genbank	54_36p	-1	validated	nonsense	c.1303	p.Q435*	1.000	superfamily_Ubiquitin-like,HMMSmart_SM00213	superfamily_Nucleotidyltransferase,PatternScan_25A_SYNTH_1,HMMPfam_OAS1_C,superfamily_PAP/OAS1 substrate-binding domain,PatternScan_25A_SYNTH_2,HMMSmart_SM00213,superfamily_Ubiquitin-like,HMMPfam_ubiquitin	-	no_errors
ADAM30	11085	genome.wustl.edu	36	1	120240008	120240008	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	1	120240008	120240008	C	T	SNP	ADAM30	NM_021794	human	genbank	54_36p	-1	reviewed	missense	c.475	p.V159I	0.001	HMMPfam_Pep_M12B_propep	"HMMPfam_Pep_M12B_propep,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Reprolysin,HMMPfam_Disintegrin,HMMSmart_SM00050,superfamily_Blood coagulation inhibitor (disintegrin),PatternScan_DISINTEGRIN_1,HMMSmart_SM00608,HMMPfam_ADAM_CR,PatternScan_EGF_2"	-	no_errors
C3orf1	51300	genome.wustl.edu	36	3	120702276	120702276	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	3	120702276	120702276	C	T	SNP	C3orf1	NM_016589	human	genbank	54_36p	+1	validated	missense	c.239	p.T80M	0.012	NULL	NULL	-	no_errors
LRRC58	116064	genome.wustl.edu	36	3	121537427	121537427	+	Silent	SNP	C	C	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	3	121537427	121537427	C	T	SNP	LRRC58	NM_001099678	human	genbank	54_36p	-1	validated	silent	c.564	p.L188	1.000	superfamily_SSF52058,HMMPfam_LRR_1	superfamily_SSF52058,HMMPfam_LRR_1,HMMSmart_LRR_TYP	-	no_errors
GRIA3	2892	genome.wustl.edu	36	X	122366396	122366396	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	X	122366396	122366396	G	T	SNP	GRIA3	NM_000828	human	genbank	54_36p	+1	reviewed	missense	c.1450	p.D484Y	1.000	HMMSmart_SM00079,superfamily_Periplasmic binding protein-like II,HMMPfam_Lig_chan-Glu_bd	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor,HMMSmart_SM00079,superfamily_Periplasmic binding protein-like II,HMMPfam_Lig_chan-Glu_bd,HMMPfam_Lig_chan	-	no_errors
RC3H2	54542	genome.wustl.edu	36	9	124682225	124682225	+	Silent	SNP	G	G	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	9	124682225	124682225	G	A	SNP	RC3H2	NM_001100588	human	genbank	54_36p	-1	validated	silent	c.961	p.L321	1.000	NULL	superfamily_RING/U-box,HMMPfam_zf-C3HC4,HMMSmart_SM00184,PatternScan_ZF_RING_1,superfamily_CCCH zinc finger,HMMSmart_SM00356,HMMPfam_zf-CCCH	-	no_errors
HEG1	57493	genome.wustl.edu	36	3	126203416	126203416	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	3	126203416	126203416	G	T	SNP	HEG1	NM_020733	human	genbank	54_36p	-1	validated	missense	c.3487	p.L1163I	0.971	NULL	superfamily_EGF/Laminin,HMMSmart_SM00179,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_CA,HMMPfam_EGF_CA,PatternScan_ASX_HYDROXYL,PatternScan_EGF_2	-	no_errors
ALDH1L1	10840	genome.wustl.edu	36	3	127307334	127307334	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	3	127307334	127307334	C	A	SNP	ALDH1L1	NM_012190	human	genbank	54_36p	-1	reviewed	missense	c.2578	p.V860F	0.932	superfamily_Aldehyde_DH/Histidinol_DH,HMMPfam_Aldedh	PatternScan_PHOSPHOPANTETHEINE,HMMPfam_Formyl_trans_N,superfamily_formyl_transf,PatternScan_GART,superfamily_FMT_C_like,HMMPfam_Formyl_trans_C,superfamily_ACP_like,superfamily_Aldehyde_DH/Histidinol_DH,HMMPfam_Aldedh,PatternScan_ALDEHYDE_DEHYDR_GLU,PatternScan_ALDEHYDE_DEHYDR_CYS	-	no_errors
UGCGL1	56886	genome.wustl.edu	36	2	128617186	128617186	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	2	128617186	128617186	G	A	SNP	UGCGL1	NM_020120	human	genbank	54_36p	+1	validated	missense	c.1768	p.V590I	1.000	NULL	HMMPfam_UDP-g_GGTase,superfamily_Nucleotide-diphospho-sugar transferases	-	no_errors
IGSF1	3547	genome.wustl.edu	36	X	130236324	130236324	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	X	130236324	130236324	G	C	SNP	IGSF1	NM_001555	human	genbank	54_36p	-1	validated	missense	c.3681	p.S1227R	1.000	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMPfam_ig,HMMSmart_SM00408	-	no_errors
PLXNA4	91584	genome.wustl.edu	36	7	131468444	131468444	+	Silent	SNP	T	T	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	7	131468444	131468444	T	A	SNP	PLXNA4	NM_020911	human	genbank	54_36p	-1	validated	silent	c.5493	p.A1831	0.096	HMMPfam_Plexin_cytopl,superfamily_GTPase activation domain GAP	superfamily_Sema domain,HMMPfam_Sema,HMMSmart_SM00630,HMMPfam_PSI,HMMSmart_SM00423,superfamily_Plexin repeat,HMMSmart_SM00429,superfamily_E set domains,HMMPfam_TIG,HMMPfam_Plexin_cytopl,superfamily_GTPase activation domain GAP	-	no_errors
COL6A6	131873	genome.wustl.edu	36	3	131823359	131823359	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	3	131823359	131823359	C	A	SNP	COL6A6	NM_001102608	human	genbank	54_36p	+1	provisional	missense	c.4820	p.P1607H	0.990	HMMPfam_Collagen	HMMSmart_SM00327,superfamily_vWA-like,HMMPfam_VWA,HMMPfam_Collagen	-	no_errors
COL5A1	1289	genome.wustl.edu	36	9	136856294	136856294	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	9	136856294	136856294	C	G	SNP	COL5A1	NM_000093	human	genbank	54_36p	+1	reviewed	missense	c.4726	p.L1576V	0.975	NULL	HMMSmart_TSPN,superfamily_ConA_like_lec_gl,HMMSmart_LamG,HMMPfam_Laminin_G_2,HMMPfam_Collagen,HMMSmart_COLFI,HMMPfam_COLFI	-	no_errors
MSL2	55167	genome.wustl.edu	36	3	137353063	137353063	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	3	137353063	137353063	C	G	SNP	MSL2	NM_018133	human	genbank	54_36p	-1	validated	missense	c.1350	p.K450N	1.000	NULL	PatternScan_ZF_RING_1,superfamily_SSF57850	-	no_errors
PCDHB18	54660	genome.wustl.edu	36	5	140595424	140595424	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	5	140595424	140595424	G	A	SNP	PCDHB18	ENST00000274705	human	ensembl	54_36p	+1	known	missense	c.955	p.D319N	0.936	superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA	HMMPfam_Cadherin_2,PatternScan_CADHERIN_1,superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA	-	no_errors
SLITRK4	139065	genome.wustl.edu	36	X	142544771	142544771	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	X	142544771	142544771	A	G	SNP	SLITRK4	NM_173078	human	genbank	54_36p	-1	validated	missense	c.1820	p.I607T	1.000	NULL	superfamily_L domain-like,HMMSmart_SM00369,HMMPfam_LRR_1,HMMSmart_SM00365,HMMSmart_SM00082,HMMPfam_LRRNT	-	no_errors
DRD5P2	0	genome.wustl.edu	36	1	147169930	147169930	+	Silent	SNP	C	C	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	1	147169930	147169930	C	A	SNP	DRD5P2	ENST00000331689	human	ensembl	54_36p	+1	known	silent	c.345	p.V115	0.996	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	-	no_start_codon:no_stop_codon
LOC100131974	0	genome.wustl.edu	36	1	147530230	147530230	+	Silent	SNP	G	G	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	1	147530230	147530230	G	A	SNP	LOC100131974	XM_001723598	human	genbank	54_36p	-1	model	silent	c.210	p.D70	0.876	NULL	NULL	-	no_errors
S100A11	6282	genome.wustl.edu	36	1	150271850	150271850	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	1	150271850	150271850	A	T	SNP	S100A11	NM_005620	human	genbank	54_36p	-1	reviewed	missense	c.230	p.F77Y	1.000	superfamily_SSF47473,HMMPfam_efhand,PatternScan_S100_CABP,PatternScan_EF_HAND_1	superfamily_SSF47473,HMMPfam_S_100,HMMPfam_efhand,PatternScan_S100_CABP,PatternScan_EF_HAND_1	-	no_errors
RHEB	6009	genome.wustl.edu	36	7	150812789	150812789	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	7	150812789	150812789	T	A	SNP	RHEB	NM_005614	human	genbank	54_36p	-1	reviewed	missense	c.159	p.E53D	0.998	HMMSmart_RAS,superfamily_SSF52540,HMMPfam_Ras	HMMSmart_RAS,superfamily_SSF52540,HMMPfam_Ras	-	no_errors
UBAP2L	9898	genome.wustl.edu	36	1	152494820	152494820	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	1	152494820	152494820	A	G	SNP	UBAP2L	NM_014847	human	genbank	54_36p	+1	validated	missense	c.2122	p.T708A	0.999	NULL	HMMPfam_UBA,HMMSmart_SM00165	-	no_errors
FGA	2243	genome.wustl.edu	36	4	155725059	155725059	+	Silent	SNP	G	G	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	4	155725059	155725059	G	T	SNP	FGA	NM_000508	human	genbank	54_36p	-1	reviewed	silent	c.2268	p.S756	0.910	superfamily_Fibrinogen C-terminal domain-like,HMMSmart_SM00186,HMMPfam_Fibrinogen_C	HMMPfam_Fib_alpha,superfamily_Fibrinogen C-terminal domain-like,HMMSmart_SM00186,HMMPfam_Fibrinogen_C,PatternScan_FIBRIN_AG_C_DOMAIN	-	no_errors
ENSG00000208216	0	genome.wustl.edu	36	2	162123354	162123354	+	RNA	SNP	T	T	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	2	162123354	162123354	T	A	SNP	ENSG00000208216	ENST00000385481	human	ensembl	54_36p	+1	novel	rna	NULL	NULL	0.024	-	-	-	pseudogene
FMO4	2329	genome.wustl.edu	36	1	169570489	169570489	+	Silent	SNP	A	A	G	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	1	169570489	169570489	A	G	SNP	FMO4	NM_002022	human	genbank	54_36p	+1	reviewed	silent	c.1143	p.T381	0.970	HMMPfam_FMO-like	superfamily_FAD/NAD(P)-binding domain,HMMPfam_FMO-like	-	no_errors
SH3PXD2B	285590	genome.wustl.edu	36	5	171698953	171698953	+	Silent	SNP	C	C	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	5	171698953	171698953	C	A	SNP	SH3PXD2B	NM_001017995	human	genbank	54_36p	-1	validated	silent	c.1761	p.L587	0.937	NULL	superfamily_PX,HMMPfam_PX,HMMSmart_PX,superfamily_SH3,HMMPfam_SH3_1,HMMSmart_SH3	-	no_errors
HRH2	3274	genome.wustl.edu	36	5	175042855	175042855	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	5	175042855	175042855	G	T	SNP	HRH2	NM_022304	human	genbank	54_36p	+1	reviewed	missense	c.13	p.G5C	1.000	NULL	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
PDE11A	50940	genome.wustl.edu	36	2	178393221	178393221	+	Silent	SNP	A	A	G	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	2	178393221	178393221	A	G	SNP	PDE11A	NM_016953	human	genbank	54_36p	-1	reviewed	silent	c.1548	p.P516	1.000	HMMPfam_GAF,HMMSmart_SM00065,superfamily_GAF domain-like	superfamily_GAF domain-like,HMMPfam_GAF,HMMSmart_SM00065,superfamily_HD-domain/PDEase-like,HMMSmart_SM00471,HMMPfam_PDEase_I,PatternScan_PDEASE_I	-	no_errors
DHX9	1660	genome.wustl.edu	36	1	181118923	181118923	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	1	181118923	181118923	A	G	SNP	DHX9	NM_001357	human	genbank	54_36p	+1	reviewed	missense	c.2941	p.N981D	1.000	HMMPfam_DUF1605	superfamily_dsRNA-binding domain-like,HMMPfam_dsrm,HMMSmart_SM00358,HMMSmart_SM00487,HMMPfam_DEAD,superfamily_P-loop containing nucleoside triphosphate hydrolases,PatternScan_DEAH_ATP_HELICASE,HMMSmart_SM00490,HMMPfam_Helicase_C,HMMPfam_HA2,HMMPfam_DUF1605	-	no_errors
PRG4	10216	genome.wustl.edu	36	1	184542675	184542675	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	1	184542675	184542675	A	C	SNP	PRG4	NM_005807	human	genbank	54_36p	+1	reviewed	missense	c.1201	p.T401P	0.297	NULL	HMMSmart_SM00201,HMMPfam_Somatomedin_B,superfamily_Somatomedin B domain,PatternScan_SMB_1,superfamily_Hemopexin-like domain,HMMPfam_Hemopexin,HMMSmart_SM00120,PatternScan_HEMOPEXIN	-	no_errors
SORBS2	8470	genome.wustl.edu	36	4	186781509	186781509	+	Nonsense_Mutation	SNP	T	A	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	4	186781509	186781509	T	A	SNP	SORBS2	NM_021069	human	genbank	54_36p	-1	reviewed	nonsense	c.2056	p.R686*	0.024	NULL	HMMPfam_Sorb,HMMSmart_SM00459,PatternScan_ZINC_FINGER_C2H2_1,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326	-	no_errors
OBSL1	23363	genome.wustl.edu	36	2	220140811	220140811	+	Silent	SNP	C	C	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	2	220140811	220140811	C	T	SNP	OBSL1	NM_015311	human	genbank	54_36p	-1	provisional	silent	c.1407	p.P469	0.078	superfamily_SSF48726,HMMSmart_IG	superfamily_SSF48726,HMMPfam_I-set,HMMSmart_IGc2,HMMSmart_IG,HMMPfam_ig,HMMPfam_fn3,superfamily_FN_III-like,HMMSmart_FN3,HMMPfam_V-set	-	no_errors
NUP133	55746	genome.wustl.edu	36	1	227660665	227660665	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	1	227660665	227660665	G	T	SNP	NUP133	NM_018230	human	genbank	54_36p	-1	reviewed	missense	c.2846	p.A949D	1.000	HMMPfam_Nup133	HMMPfam_Nup133_N,HMMPfam_Nup133	-	no_errors
TTC13	79573	genome.wustl.edu	36	1	229109290	229109290	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	1	229109290	229109290	C	G	SNP	TTC13	NM_024525	human	genbank	54_36p	-1	validated	missense	c.2567	p.C856S	1.000	NULL	HMMSmart_SM00028,superfamily_TPR-like,HMMPfam_TPR_1,HMMPfam_TPR_2	-	no_errors
SP140	11262	genome.wustl.edu	36	2	230842900	230842900	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	2	230842900	230842900	T	A	SNP	SP140	NM_007237	human	genbank	54_36p	+1	validated	missense	c.1432	p.C478S	0.000	NULL	HMMPfam_Sp100,superfamily_SAND domain-like,HMMPfam_SAND,HMMSmart_SM00258,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1,superfamily_Bromodomain,HMMSmart_SM00297,HMMPfam_Bromodomain	-	no_errors
SNORA14B	677802	genome.wustl.edu	36	1	233357836	233357836	+	RNA	SNP	G	G	T	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	1	233357836	233357836	G	T	SNP	SNORA14B	NR_002956	human	genbank	54_36p	-1	reviewed	rna	NULL	NULL	0.925	-	-	-	no_errors
MUC16	94025	genome.wustl.edu	36	19	8945558	8945573	+	Frame_Shift_Del	DEL	TGTAGATGTGGGAACC	TGTAGATGTGGGAACC	-	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	TGTAGATGTGGGAACC	TGTAGATGTGGGAACC					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	19	8945558	8945573	TGTAGATGTGGGAACC	-	DEL	MUC16	NM_024690	human	genbank	54_36p	-1	validated	frame_shift_del	c.7257_7242	p.V2415fs	0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.000	NULL	PatternScan_ATPASE_ALPHA_BETA,superfamily_SEA domain,HMMSmart_SM00200,HMMPfam_SEA	(deletion:cds_exon[8943340,8952814])	no_errors
MPHOSPH8	54737	genome.wustl.edu	36	13	19135171	19135209	+	Splice_Site	DEL	TTTTCATAGAACTTTTTAACAACAGTGGCTATTCTTTTG	TTTTCATAGAACTTTTTAACAACAGTGGCTATTCTTTTG	-	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	TTTTCATAGAACTTTTTAACAACAGTGGCTATTCTTTTG	TTTTCATAGAACTTTTTAACAACAGTGGCTATTCTTTTG					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	13	19135171	19135209	TTTTCATAGAACTTTTTAACAACAGTGGCTATTCTTTTG	-	DEL	MPHOSPH8	NM_017520	human	genbank	54_36p	+1	provisional	splice_site_del	c.1933-9_1933-1	e9-1	0.701:0.830:0.850:0.848:0.593:0.576:0.541:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.993:1.000:1.000:1.000:0.996:0.021:0.981:0.986:0.837:1.000:1.000:1.000:1.000:1.000:0.996:1.000:1.000:1.000:1.000:1.000:0.998:0.999:1.000:1.000	-	-	(deletion:intron[19133979,19135179], cds_exon[19135180,19135266])	no_errors
LOC645294	645294	genome.wustl.edu	36	17	20598413	20598422	+	RNA	DEL	TTGGCTACGA	TTGGCTACGA	-	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	TTGGCTACGA	TTGGCTACGA					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	17	20598413	20598422	TTGGCTACGA	-	DEL	LOC645294	XR_016910	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.846:0.909:0.918:0.917:0.931:0.951:0.952:0.956:0.965:0.983	-	-	(deletion:rna[20598053,20598488])	pseudogene
STT3B	201595	genome.wustl.edu	36	3	31633426	31633449	+	In_Frame_Del	DEL	TGTCTTTGCATTGCTGCAAGCTTA	TGTCTTTGCATTGCTGCAAGCTTA	-	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	TGTCTTTGCATTGCTGCAAGCTTA	TGTCTTTGCATTGCTGCAAGCTTA					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	3	31633426	31633449	TGTCTTTGCATTGCTGCAAGCTTA	-	DEL	STT3B	NM_178862	human	genbank	54_36p	+1	provisional	in_frame_del	c.978_1001	p.VFALLQAY327in_frame_del	1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.944:0.973:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	HMMPfam_STT3	HMMPfam_STT3	(deletion:cds_exon[31633425,31633571])	no_errors
ZFYVE19	84936	genome.wustl.edu	36	15	38887191	38887192	+	Frame_Shift_Ins	INS	-	-	GGGGC	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	-	-					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	15	38887191	38887192	-	GGGGC	INS	ZFYVE19	NM_001077268	human	genbank	54_36p	+1	validated	frame_shift_ins	c.112_113	p.A42fs	0.027:0.013	NULL	HMMSmart_SM00064,superfamily_FYVE/PHD zinc finger,HMMPfam_FYVE,PatternScan_2FE2S_FER_1	-	no_errors
TSPAN18	90139	genome.wustl.edu	36	11	44907299	44907318	+	Frame_Shift_Del	DEL	CCAGTAGAGGGTATGGCCTG	CCAGTAGAGGGTATGGCCTG	-	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	CCAGTAGAGGGTATGGCCTG	CCAGTAGAGGGTATGGCCTG					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	11	44907299	44907318	CCAGTAGAGGGTATGGCCTG	-	DEL	TSPAN18	NM_130783	human	genbank	54_36p	+1	provisional	frame_shift_del	c.741_747	p.I247fs	1.000:1.000:1.000:1.000:1.000:0.995:0.776	HMMPfam_Tetraspannin	HMMPfam_Tetraspannin,PatternScan_TM4_1,superfamily_Tetraspanin	(deletion:cds_exon[44907258,44907305], utr_exon[44907306,44909459])	no_errors
NCOA3	8202	genome.wustl.edu	36	20	45709360	45709384	+	Frame_Shift_Del	DEL	GACAATCACCATCTTTTAACTCTAT	GACAATCACCATCTTTTAACTCTAT	-	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	GACAATCACCATCTTTTAACTCTAT	GACAATCACCATCTTTTAACTCTAT					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	20	45709360	45709384	GACAATCACCATCTTTTAACTCTAT	-	DEL	NCOA3	NM_181659	human	genbank	54_36p	+1	reviewed	frame_shift_del	c.3389_3413	p.Q1131fs	1.000:1.000:1.000:1.000:0.985:0.975:0.930:0.813:0.785:0.692:0.665:0.688:0.693:0.619:1.000:1.000:1.000:1.000:1.000:0.985:0.986:0.984:0.089:0.811:0.999	NULL	superfamily_HLH helix-loop-helix DNA-binding domain,HMMPfam_HLH,HMMSmart_SM00353,HMMPfam_PAS,HMMSmart_SM00091,superfamily_PYP-like sensor domain (PAS domain),HMMPfam_SRC-1,superfamily_Nuclear receptor coactivator interlocking domain,HMMPfam_Nuc_rec_co-act,HMMPfam_DUF1518	(deletion:cds_exon[45709224,45709517])	no_errors
SERPINB10	5273	genome.wustl.edu	36	18	59733714	59733715	+	Splice_Site	INS	-	-	G	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	-	-					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	18	59733714	59733715	-	G	INS	SERPINB10	ENST00000397996	human	ensembl	54_36p	+1	known	splice_site_ins	c.1-2_1	e1-1	0.318:0.323	-	-	-	no_errors
CALB2	794	genome.wustl.edu	36	16	69981254	69981277	+	Frame_Shift_Del	DEL	CGAGCCCCCCATGTAAAGTGGGGA	CGAGCCCCCCATGTAAAGTGGGGA	-	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	CGAGCCCCCCATGTAAAGTGGGGA	CGAGCCCCCCATGTAAAGTGGGGA					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	16	69981254	69981277	CGAGCCCCCCATGTAAAGTGGGGA	-	DEL	CALB2	NM_001740	human	genbank	54_36p	+1	reviewed	frame_shift_del	c.801_816	p.S267fs	0.949:0.999:1.000:1.000:1.000:1.000:1.000:0.993:0.954:0.643:0.617:0.976:0.997:0.998:0.994:0.975	NULL	superfamily_SSF47473,HMMSmart_EFh,HMMPfam_efhand,PatternScan_EF_HAND_1	(deletion:cds_exon[69981153,69981269], utr_exon[69981270,69981842])	no_errors
UBR7	55148	genome.wustl.edu	36	14	92751343	92751373	+	Frame_Shift_Del	DEL	TTGTTCTTTTTTGTGGGCTTATGCTGCACAA	TTGTTCTTTTTTGTGGGCTTATGCTGCACAA	-	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	TTGTTCTTTTTTGTGGGCTTATGCTGCACAA	TTGTTCTTTTTTGTGGGCTTATGCTGCACAA					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	14	92751343	92751373	TTGTTCTTTTTTGTGGGCTTATGCTGCACAA	-	DEL	UBR7	NM_175748	human	genbank	54_36p	+1	validated	frame_shift_del	c.564_594	p.C189fs	0.883:0.963:0.969:0.887:0.893:0.901:0.776:0.993:1.000:1.000:0.998:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.994:1.000:1.000:1.000:1.000:1.000:0.995:0.998:1.000:0.994:0.998:0.991:0.007	NULL	PatternScan_ZF_PHD_1,HMMPfam_zf-UBR,HMMPfam_PHD,HMMSmart_PHD	(deletion:cds_exon[92751275,92751380])	no_errors
LOC100131733	0	genome.wustl.edu	36	12	107974809	107974810	+	In_Frame_Ins	INS	-	-	CGGCGG	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	-	-					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	12	107974809	107974810	-	CGGCGG	INS	LOC100131733	XM_001722340	human	genbank	54_36p	-1	model	in_frame_ins	c.190_189	p.63in_frame_insPP	0.000:0.000	NULL	NULL	-	no_errors
GRIA2	2891	genome.wustl.edu	36	4	158502192	158502192	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	4	158502192	158502192	A	-	DEL	GRIA2	NM_000826	human	genbank	54_36p	+1	reviewed	frame_shift_del	c.2344	p.K782fs	1.000	superfamily_SSF53850,HMMSmart_PBPe,HMMPfam_Lig_chan	superfamily_SSF53822,HMMPfam_ANF_receptor,superfamily_SSF53850,HMMSmart_PBPe,HMMPfam_Lig_chan-Glu_bd,HMMPfam_Lig_chan	(deletion:cds_exon[158502140,158502254])	no_errors
FCRLA	84824	genome.wustl.edu	36	1	159947771	159947778	+	Frame_Shift_Del	DEL	TTCTCCAT	TTCTCCAT	-	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	TTCTCCAT	TTCTCCAT					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	1	159947771	159947778	TTCTCCAT	-	DEL	FCRLA	NM_032738	human	genbank	54_36p	+1	validated	frame_shift_del	c.433_440	p.F145fs	0.037:0.084:0.087:0.080:0.076:0.058:0.044:0.008	superfamily_SSF48726,HMMSmart_IG,HMMPfam_ig	superfamily_SSF48726,HMMSmart_IG,HMMPfam_ig	(deletion:cds_exon[159947622,159947888])	no_errors
ENSG00000215809	0	genome.wustl.edu	36	1	234713402	234713417	+	Frame_Shift_Del	DEL	ATTTGGTGCAAATGCC	ATTTGGTGCAAATGCC	-	novel	unknown	TCGA-24-1845-01A-01W-0639-09	TCGA-24-1845-10A-01W-0639-09	ATTTGGTGCAAATGCC	ATTTGGTGCAAATGCC					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	c155ffc9-8a13-4c5c-bacd-fda1d8b07ca3	8ceff811-6278-4a0b-9abb-8640ba4e7fee	1	234713402	234713417	ATTTGGTGCAAATGCC	-	DEL	ENSG00000215809	ENST00000359362	human	ensembl	54_36p	+1	known	frame_shift_del	c.315_330	p.G107fs	0.993:1.000:1.000:1.000:1.000:1.000:0.963:0.963:0.817:0.454:0.991:0.999:0.997:1.000:1.000:1.000	HMMPfam_Enolase_N,superfamily_SSF54826	HMMPfam_Enolase_N,superfamily_SSF54826,superfamily_SSF51604,HMMPfam_Enolase_C	(deletion:cds_exon[234713088,234714254])	no_errors
