Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
TM2D1	83941	broad.mit.edu	36	1	61947587	61947587	+	Splice_Site	SNP	A	A	C	novel	none	TCGA-25-1320-01A-01W-0492-08	TCGA-25-1320-10A-01W-0492-08	A	A	C	C	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	ae2cb5e3-cd36-4d7c-97dc-2f72a08dddb1	5a731a5f-410b-4139-b43c-043de422be40
VAV3	10451	broad.mit.edu	36	1	108112631	108112631	+	Silent	SNP	T	T	C	novel	none	TCGA-25-1320-01A-01W-0492-08	TCGA-25-1320-10A-01W-0492-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	ae2cb5e3-cd36-4d7c-97dc-2f72a08dddb1	5a731a5f-410b-4139-b43c-043de422be40
GNAI3	2773	broad.mit.edu	36	1	109917913	109917913	+	Silent	SNP	G	G	A	novel	none	TCGA-25-1320-01A-01W-0492-08	TCGA-25-1320-10A-01W-0492-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	ae2cb5e3-cd36-4d7c-97dc-2f72a08dddb1	5a731a5f-410b-4139-b43c-043de422be40
SNX27	81609	broad.mit.edu	36	1	149907704	149907704	+	Missense_Mutation	SNP	A	A	G	novel	none	TCGA-25-1320-01A-01W-0492-08	TCGA-25-1320-10A-01W-0492-08	A	A	G	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	ae2cb5e3-cd36-4d7c-97dc-2f72a08dddb1	5a731a5f-410b-4139-b43c-043de422be40
RHBG	57127	broad.mit.edu	36	1	154614686	154614686	+	Missense_Mutation	SNP	C	C	A	novel	none	TCGA-25-1320-01A-01W-0492-08	TCGA-25-1320-10A-01W-0492-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	ae2cb5e3-cd36-4d7c-97dc-2f72a08dddb1	5a731a5f-410b-4139-b43c-043de422be40
IRF6	3664	broad.mit.edu	36	1	208035326	208035326	+	Missense_Mutation	SNP	T	T	C	novel	none	TCGA-25-1320-01A-01W-0492-08	TCGA-25-1320-10A-01W-0492-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	ae2cb5e3-cd36-4d7c-97dc-2f72a08dddb1	5a731a5f-410b-4139-b43c-043de422be40
A2ML1	144568	broad.mit.edu	36	12	8912192	8912192	+	Nonsense_Mutation	SNP	C	C	T	novel	none	TCGA-25-1320-01A-01W-0492-08	TCGA-25-1320-10A-01W-0492-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	ae2cb5e3-cd36-4d7c-97dc-2f72a08dddb1	5a731a5f-410b-4139-b43c-043de422be40
LRRK2	120892	broad.mit.edu	36	12	38954744	38954744	+	Missense_Mutation	SNP	A	A	C	novel	none	TCGA-25-1320-01A-01W-0492-08	TCGA-25-1320-10A-01W-0492-08	A	A	C	C	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	ae2cb5e3-cd36-4d7c-97dc-2f72a08dddb1	5a731a5f-410b-4139-b43c-043de422be40
ADAMTS20	80070	broad.mit.edu	36	12	42110486	42110486	+	Missense_Mutation	SNP	T	T	A	novel	none	TCGA-25-1320-01A-01W-0492-08	TCGA-25-1320-10A-01W-0492-08	T	T	A	A	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	ae2cb5e3-cd36-4d7c-97dc-2f72a08dddb1	5a731a5f-410b-4139-b43c-043de422be40
TRPC4	7223	broad.mit.edu	36	13	37123457	37123457	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-25-1320-01A-01W-0492-08	TCGA-25-1320-10A-01W-0492-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	ae2cb5e3-cd36-4d7c-97dc-2f72a08dddb1	5a731a5f-410b-4139-b43c-043de422be40
C15orf2	23742	broad.mit.edu	36	15	22472629	22472629	+	Silent	SNP	C	C	T	novel	none	TCGA-25-1320-01A-01W-0492-08	TCGA-25-1320-10A-01W-0492-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	ae2cb5e3-cd36-4d7c-97dc-2f72a08dddb1	5a731a5f-410b-4139-b43c-043de422be40
KIAA1199	57214	broad.mit.edu	36	15	78960497	78960497	+	Silent	SNP	C	C	T	novel	none	TCGA-25-1320-01A-01W-0492-08	TCGA-25-1320-10A-01W-0492-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	ae2cb5e3-cd36-4d7c-97dc-2f72a08dddb1	5a731a5f-410b-4139-b43c-043de422be40
BNC1	646	broad.mit.edu	36	15	81723796	81723796	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-25-1320-01A-01W-0492-08	TCGA-25-1320-10A-01W-0492-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	ae2cb5e3-cd36-4d7c-97dc-2f72a08dddb1	5a731a5f-410b-4139-b43c-043de422be40
TSC2	7249	broad.mit.edu	36	16	2069154	2069154	+	Missense_Mutation	SNP	G	G	T	novel	none	TCGA-25-1320-01A-01W-0492-08	TCGA-25-1320-10A-01W-0492-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	ae2cb5e3-cd36-4d7c-97dc-2f72a08dddb1	5a731a5f-410b-4139-b43c-043de422be40
SCN4A	6329	broad.mit.edu	36	17	59378218	59378218	+	Silent	SNP	C	C	T	novel	none	TCGA-25-1320-01A-01W-0492-08	TCGA-25-1320-10A-01W-0492-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	ae2cb5e3-cd36-4d7c-97dc-2f72a08dddb1	5a731a5f-410b-4139-b43c-043de422be40
CNDP2	55748	broad.mit.edu	36	18	70334551	70334551	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-25-1320-01A-01W-0492-08	TCGA-25-1320-10A-01W-0492-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	ae2cb5e3-cd36-4d7c-97dc-2f72a08dddb1	5a731a5f-410b-4139-b43c-043de422be40
RDH8	50700	broad.mit.edu	36	19	9993084	9993084	+	Silent	SNP	C	C	T	novel	none	TCGA-25-1320-01A-01W-0492-08	TCGA-25-1320-10A-01W-0492-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture;Sequenom			Illumina GAIIx	ae2cb5e3-cd36-4d7c-97dc-2f72a08dddb1	5a731a5f-410b-4139-b43c-043de422be40
NCAN	1463	broad.mit.edu	36	19	19200041	19200041	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-25-1320-01A-01W-0492-08	TCGA-25-1320-10A-01W-0492-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	ae2cb5e3-cd36-4d7c-97dc-2f72a08dddb1	5a731a5f-410b-4139-b43c-043de422be40
ZNF536	9745	broad.mit.edu	36	19	35628320	35628320	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-25-1320-01A-01W-0492-08	TCGA-25-1320-10A-01W-0492-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	ae2cb5e3-cd36-4d7c-97dc-2f72a08dddb1	5a731a5f-410b-4139-b43c-043de422be40
SP100	6672	broad.mit.edu	36	2	231040173	231040173	+	Silent	SNP	G	G	A	novel	none	TCGA-25-1320-01A-01W-0492-08	TCGA-25-1320-10A-01W-0492-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	ae2cb5e3-cd36-4d7c-97dc-2f72a08dddb1	5a731a5f-410b-4139-b43c-043de422be40
GIGYF2	26058	broad.mit.edu	36	2	233367824	233367824	+	Missense_Mutation	SNP	G	G	T	novel	none	TCGA-25-1320-01A-01W-0492-08	TCGA-25-1320-10A-01W-0492-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	ae2cb5e3-cd36-4d7c-97dc-2f72a08dddb1	5a731a5f-410b-4139-b43c-043de422be40
KIAA0406	9675	broad.mit.edu	36	20	36075196	36075196	+	Missense_Mutation	SNP	G	G	C	novel	none	TCGA-25-1320-01A-01W-0492-08	TCGA-25-1320-10A-01W-0492-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	ae2cb5e3-cd36-4d7c-97dc-2f72a08dddb1	5a731a5f-410b-4139-b43c-043de422be40
PIGZ	80235	broad.mit.edu	36	3	198158883	198158883	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-25-1320-01A-01W-0492-08	TCGA-25-1320-10A-01W-0492-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	ae2cb5e3-cd36-4d7c-97dc-2f72a08dddb1	5a731a5f-410b-4139-b43c-043de422be40
ADAMTS16	170690	broad.mit.edu	36	5	5288235	5288235	+	Silent	SNP	C	C	T	novel	none	TCGA-25-1320-01A-01W-0492-08	TCGA-25-1320-10A-01W-0492-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	ae2cb5e3-cd36-4d7c-97dc-2f72a08dddb1	5a731a5f-410b-4139-b43c-043de422be40
STC2	8614	broad.mit.edu	36	5	172677475	172677475	+	Missense_Mutation	SNP	T	T	A	novel	none	TCGA-25-1320-01A-01W-0492-08	TCGA-25-1320-10A-01W-0492-08	T	T	A	A	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	ae2cb5e3-cd36-4d7c-97dc-2f72a08dddb1	5a731a5f-410b-4139-b43c-043de422be40
PPP1R10	5514	broad.mit.edu	36	6	30680387	30680387	+	Silent	SNP	G	G	A	novel	none	TCGA-25-1320-01A-01W-0492-08	TCGA-25-1320-10A-01W-0492-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture;Sequenom			Illumina GAIIx	ae2cb5e3-cd36-4d7c-97dc-2f72a08dddb1	5a731a5f-410b-4139-b43c-043de422be40
RARS2	57038	broad.mit.edu	36	6	88315054	88315054	+	Missense_Mutation	SNP	A	A	C	novel	none	TCGA-25-1320-01A-01W-0492-08	TCGA-25-1320-10A-01W-0492-08	A	A	C	C	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	ae2cb5e3-cd36-4d7c-97dc-2f72a08dddb1	5a731a5f-410b-4139-b43c-043de422be40
BAZ1B	9031	broad.mit.edu	36	7	72529330	72529330	+	Silent	SNP	T	T	C	novel	none	TCGA-25-1320-01A-01W-0492-08	TCGA-25-1320-10A-01W-0492-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	ae2cb5e3-cd36-4d7c-97dc-2f72a08dddb1	5a731a5f-410b-4139-b43c-043de422be40
YWHAG	7532	broad.mit.edu	36	7	75797405	75797405	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-25-1320-01A-01W-0492-08	TCGA-25-1320-10A-01W-0492-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	ae2cb5e3-cd36-4d7c-97dc-2f72a08dddb1	5a731a5f-410b-4139-b43c-043de422be40
MET	4233	broad.mit.edu	36	7	116127172	116127172	+	Missense_Mutation	SNP	G	G	C	novel	none	TCGA-25-1320-01A-01W-0492-08	TCGA-25-1320-10A-01W-0492-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	ae2cb5e3-cd36-4d7c-97dc-2f72a08dddb1	5a731a5f-410b-4139-b43c-043de422be40
CYP7B1	9420	broad.mit.edu	36	8	65690224	65690224	+	Missense_Mutation	SNP	G	G	T	novel	none	TCGA-25-1320-01A-01W-0492-08	TCGA-25-1320-10A-01W-0492-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	ae2cb5e3-cd36-4d7c-97dc-2f72a08dddb1	5a731a5f-410b-4139-b43c-043de422be40
TP53	7157	broad.mit.edu	36	17	7520040	7520040	+	Frame_Shift_Del	DEL	G	-	G	novel	none	TCGA-25-1320-01A-01W-0492-08	TCGA-25-1320-10A-01W-0492-08	G	G	-	-	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Illumina_Capture			Illumina GAIIx	ae2cb5e3-cd36-4d7c-97dc-2f72a08dddb1	5a731a5f-410b-4139-b43c-043de422be40
