Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error
CFHR4	10877	genome.wustl.edu	36	1	195138355	195138355	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	1	195138355	195138355	G	A	SNP	CFHR4	NM_006684	human	genbank	54_36p	1	validated	silent	c.243	p.T81	0.001	NULL	-	-	no_errors
LOC728973	728973	genome.wustl.edu	36	1	231491760	231491760	+	RNA	SNP	G	G	T	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	G	G	G	T	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	1	231491760	231491760	G	T	SNP	LOC728973	XR_015809	human	genbank	54_36p	-1	model	rna	NULL	NULL	1	-	-	-	pseudogene
SRRM1	10250	genome.wustl.edu	36	1	24850623	24850623	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	Sanger_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	1	24850623	24850623	A	G	SNP	SRRM1	NM_005839	human	genbank	54_36p	1	validated	missense	c.658	p.T220A	0.82	NULL	-	-	no_errors
RNF220	55182	genome.wustl.edu	36	1	44650891	44650891	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	1	44650891	44650891	G	A	SNP	RNF220	NM_018150	human	genbank	54_36p	1	validated	missense	c.535	p.V179I	1	NULL	-	-	no_errors
CAMK1D	57118	genome.wustl.edu	36	10	12898306	12898306	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	10	12898306	12898306	C	T	SNP	CAMK1D	NM_153498	human	genbank	54_36p	1	reviewed	missense	c.806	p.T269M	0.995	HMMPfam_Pkinase	HMMPfam_Pkinase,superfamily_Protein kinase-like (PK-like)	-	no_errors
PTPN5	84867	genome.wustl.edu	36	11	18707988	18707988	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	11	18707988	18707988	A	T	SNP	PTPN5	ENST00000396166	human	ensembl	54_36p	-1	known	missense	c.101	p.L34Q	0	NULL	-	-	no_errors
FIBP	9158	genome.wustl.edu	36	11	65408520	65408520	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	11	65408520	65408520	C	T	SNP	FIBP	NM_198897	human	genbank	54_36p	-1	reviewed	missense	c.944	p.R315H	1	NULL	-	-	no_errors
PYROXD1	79912	genome.wustl.edu	36	12	21507026	21507026	+	Missense_Mutation	SNP	G	G	C	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	G	G	G	C	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	12	21507026	21507026	G	C	SNP	PYROXD1	NM_024854	human	genbank	54_36p	1	validated	missense	c.1079	p.C360S	1	NULL	-	-	no_errors
KIF21A	55605	genome.wustl.edu	36	12	37981704	37981704	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	12	37981704	37981704	C	A	SNP	KIF21A	NM_017641	human	genbank	54_36p	-1	validated	silent	c.4737	p.V1579	0.194	NULL	-	-	no_errors
LOC100131403	100131403	genome.wustl.edu	36	12	48631219	48631219	+	Missense_Mutation	SNP	C	T	T	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	C	C	T	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	12	48631219	48631219	C	T	SNP	LOC100131403	XM_001718330	human	genbank	54_36p	-1	model	missense	c.511	p.A171T	0.857	NULL	-	-	no_errors
SCN8A	6334	genome.wustl.edu	36	12	50386588	50386588	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	12	50386588	50386588	A	G	SNP	SCN8A	NM_014191	human	genbank	54_36p	1	validated	missense	c.1457	p.K486R	1	NULL	HMMPfam_IQ,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc,superfamily_EF-hand,superfamily_P-loop containing nucleoside triphosphate hydrolases,superfamily_Voltage-gated potassium channels	-	no_errors
OR10A7	121364	genome.wustl.edu	36	12	53901945	53901945	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	12	53901945	53901945	C	T	SNP	OR10A7	NM_001005280	human	genbank	54_36p	1	provisional	silent	c.870	p.Y290	1	NULL	-	-	no_errors
NAV3	89795	genome.wustl.edu	36	12	77040268	77040268	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	12	77040268	77040268	G	A	SNP	NAV3	NM_014903	human	genbank	54_36p	1	validated	silent	c.4167	p.L1389	1	NULL	HMMPfam_CH,superfamily_Calponin-homology domain CH-domain,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
MYO16	23026	genome.wustl.edu	36	13	108338817	108338817	+	Missense_Mutation	SNP	A	A	T	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	A	A	A	T	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	13	108338817	108338817	A	T	SNP	MYO16	NM_015011	human	genbank	54_36p	1	validated	missense	c.1584	p.R528S	0.985	HMMPfam_Myosin_head	HMMPfam_IQ,HMMPfam_Myosin_head,HMMPfam_Ank,superfamily_Ankyrin repeat,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
STOML3	161003	genome.wustl.edu	36	13	38439003	38439003	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	13	38439003	38439003	C	T	SNP	STOML3	NM_145286	human	genbank	54_36p	-1	validated	missense	c.835	p.V279I	0.001	NULL	-	-	no_errors
DGKH	160851	genome.wustl.edu	36	13	41691919	41691919	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	13	41691919	41691919	G	A	SNP	DGKH	NM_178009	human	genbank	54_36p	1	reviewed	missense	c.3431	p.S1144N	1	NULL	HMMPfam_DAGK_acc,HMMPfam_DAGK_cat,HMMPfam_PH,HMMPfam_C1_1,superfamily_SAM/Pointed domain,HMMPfam_SAM_2,superfamily_PH domain-like,superfamily_Cysteine-rich domain	-	no_errors
SLITRK5	26050	genome.wustl.edu	36	13	87127446	87127446	+	Missense_Mutation	SNP	C	C	A	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	13	87127446	87127446	C	A	SNP	SLITRK5	NM_015567	human	genbank	54_36p	1	validated	missense	c.1802	p.T601N	0.897	NULL	HMMPfam_LRRNT,HMMPfam_LRR_1,superfamily_L domain-like	-	no_errors
C15orf33	196951	genome.wustl.edu	36	15	47621290	47621290	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	15	47621290	47621290	A	G	SNP	C15orf33	NM_152647	human	genbank	54_36p	-1	validated	silent	c.753	p.Y251	0.993	NULL	-	-	no_errors
UNC13C	440279	genome.wustl.edu	36	15	52647435	52647435	+	Missense_Mutation	SNP	A	A	C	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	A	A	A	C	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	15	52647435	52647435	A	C	SNP	UNC13C	NM_001080534	human	genbank	54_36p	1	provisional	missense	c.6104	p.Q2035P	1	NULL	-	-	no_errors
MNS1	55329	genome.wustl.edu	36	15	54508658	54508658	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	15	54508658	54508658	A	G	SNP	MNS1	NM_018365	human	genbank	54_36p	-1	reviewed	missense	c.1421	p.I474T	0.982	NULL	-	-	no_errors
MT1M	4499	genome.wustl.edu	36	16	55224761	55224761	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	T	T	T	C	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	16	55224761	55224761	T	C	SNP	MT1M	NM_176870	human	genbank	54_36p	1	validated	missense	c.37	p.C13R	0.982	NULL	-	-	no_errors
LRRC50	123872	genome.wustl.edu	36	16	82745725	82745725	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	16	82745725	82745725	G	A	SNP	LRRC50	NM_178452	human	genbank	54_36p	1	validated	missense	c.395	p.R132H	1	NULL	HMMPfam_LRR_1,superfamily_Outer arm dynein light chain 1	-	no_errors
SYNRG	11276	genome.wustl.edu	36	17	32976327	32976327	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	17	32976327	32976327	G	A	SNP	AP1GBP1	NM_007247	human	genbank	54_36p	-1	reviewed	missense	c.3062	p.S1021L	0.083	NULL	superfamily_EF-hand	-	no_errors
CDK12	51755	genome.wustl.edu	36	17	34921343	34921343	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	A	A	A	G	A	A	Verified	Valid	Somatic	Phase_III	Capture	454_PCR_WGA		dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	17	34921343	34921343	A	G	SNP	CRKRS	NM_016507	human	genbank	54_36p	1	validated	missense	c.2702	p.Y901C	1	HMMPfam_Pkinase	Pkinase;HMMPfam_Pkinase	-	no_errors
TP53	7157	genome.wustl.edu	36	17	7518960	7518960	+	Missense_Mutation	SNP	T	T	C	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	T	T	T	C	T	T	Verified	Valid	Somatic	Phase_III	PCR	454_PCR_WGA		dbGAP	ABI 3730xl	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	17	7518960	7518960	T	C	SNP	TP53	NM_000546	human	genbank	54_36p	-1	reviewed	missense	c.614	p.Y205C	0.97	HMMPfam_P53	superfamily_p53-like transcription factors;superfamily_p53 tetramerization domain;P53_tetramer;HMMPfam_P53_tetramer;P53;HMMPfam_P53;P53_TAD;HMMPfam_P53_TAD	-	no_errors
ZNF675	171392	genome.wustl.edu	36	19	23628887	23628887	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA		dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	19	23628887	23628887	A	G	SNP	ZNF675	NM_138330	human	genbank	54_36p	-1	validated	missense	c.688	p.C230R	0.11	NULL	HMMPfam_KRAB;HMMPfam_zf-C2H2;superfamily_KRAB domain (Kruppel-associated box Pfam 01352);superfamily_C2H2 and C2HC zinc fingers	-	no_errors
PSG6	5675	genome.wustl.edu	36	19	48103123	48103123	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	19	48103123	48103123	C	T	SNP	PSG6	NM_002782	human	genbank	54_36p	-1	provisional	missense	c.1031	p.R344H	0.014	NULL	-	-	no_errors
ZNF525	170958	genome.wustl.edu	36	19	58576422	58576422	+	RNA	SNP	C	C	T	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	19	58576422	58576422	C	T	SNP	ZNF525	NR_003699	human	genbank	54_36p	1	validated	rna	NULL	NULL	0	-	-	-	pseudogene
MUC16	94025	genome.wustl.edu	36	19	8936296	8936296	+	Missense_Mutation	SNP	T	A	T	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	T	T	A	T	T	T	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA		dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	19	8936296	8936296	T	A	SNP	MUC16	NM_024690	human	genbank	54_36p	-1	validated	missense	c.12150	p.E4050D		NULL	HMMPfam_SEA;superfamily_Immunoglobulin;superfamily_SEA domain	-	no_errors
POTEF	728378	genome.wustl.edu	36	2	130549478	130549478	+	Silent	SNP	A	A	G	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	A	A	A	G	A	A	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	2	130549478	130549478	A	G	SNP	POTEF	NM_001099771	human	genbank	54_36p	-1	validated	silent	c.2037	p.D679	0	NULL	-	-	no_errors
GRB14	2888	genome.wustl.edu	36	2	165112482	165112482	+	Silent	SNP	G	A	G	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	G	G	A	G	G	G	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA		dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	2	165112482	165112482	G	A	SNP	GRB14	NM_004490	human	genbank	54_36p	-1	reviewed	silent	c.415	p.L139	1	HMMPfam_RA	RA;HMMPfam_RA;SH2;HMMPfam_SH2;PH;HMMPfam_PH;BPS;HMMPfam_BPS	-	no_errors
TTN	7273	genome.wustl.edu	36	2	179190353	179190355	+	In_Frame_Del	DEL	CTT	CTT	-	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	CTT	CTT	CTT	-	CTT	CTT	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	2	179190353	179190355	CTT	-	DEL	TTN	NM_133378	human	genbank	54_36p	-1	reviewed	in_frame_del	c.40000_39998	p.E13333in_frame_del	1.000:0.904:1.000	NULL	-	(deletion:cds_exon[179190297,179190484])	pseudogene:no_stop_codon:bad_bp_length_for_coding_region
PPIL3	53938	genome.wustl.edu	36	2	201460795	201460795	+	Splice_Site	SNP	C	C	T		Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	2	201460795	201460795	C	T	SNP	PPIL3	NM_131916	human	genbank	54_36p	-1	reviewed	splice_site	c.1-1	e1-1	0.001	-	-	-	no_errors
RPL37A	6168	genome.wustl.edu	36	2	217072952	217072952	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	2	217072952	217072952	C	T	SNP	RPL37A	NM_000998	human	genbank	54_36p	1	reviewed	silent	c.168	p.H56	1	NULL	-	-	no_errors
DOCK10	55619	genome.wustl.edu	36	2	225378178	225378178	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	2	225378178	225378178	G	A	SNP	DOCK10	NM_014689	human	genbank	54_36p	-1	validated	missense	c.4040	p.T1347M	1	NULL	-	-	no_errors
LHCGR	3973	genome.wustl.edu	36	2	48768857	48768857	+	Missense_Mutation	SNP	A	A	G	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA		dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	2	48768857	48768857	A	G	SNP	LHCGR	NM_000233	human	genbank	54_36p	-1	reviewed	missense	c.1583	p.I528T	1	HMMPfam_7tm_1	HMMPfam_7tm_1;superfamily_L domain-like;superfamily_Family A G protein-coupled receptor-like	-	no_errors
LOC100130746	100130746	genome.wustl.edu	36	5	24206973	24206973	+	RNA	SNP	T	T	A	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	T	T	T	A	T	T	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	5	24206973	24206973	T	A	SNP	LOC100130746	XR_038810	human	genbank	54_36p	1	model	rna	NULL	NULL	1	-	-	-	pseudogene
SIGLEC14	100049587	genome.wustl.edu	36	19	56841005	56841005	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	19	56841005	56841005	G	A	SNP	SIGLEC14	NM_001098612	human	genbank	54_36p	-1	validated	missense	c.542	p.T181M	0.003	NULL	-	-	no_errors
KCND2	3751	genome.wustl.edu	36	7	119702341	119702341	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	7	119702341	119702341	G	A	SNP	KCND2	NM_012281	human	genbank	54_36p	1	reviewed	missense	c.419	p.R140H	0.995	NULL	HMMPfam_K_tetra,HMMPfam_Ion_trans,superfamily_POZ domain,superfamily_Voltage-gated potassium channels	-	no_errors
RAPGEF5	9771	genome.wustl.edu	36	7	22314494	22314494	+	Silent	SNP	G	G	A	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	7	22314494	22314494	G	A	SNP	RAPGEF5	NM_012294	human	genbank	54_36p	-1	validated	silent	c.210	p.G70	0.945	NULL	-	-	no_errors
DPY19L2P1	554236	genome.wustl.edu	36	7	35097826	35097826	+	RNA	SNP	C	C	G	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	C	C	C	G	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	7	35097826	35097826	C	G	SNP	DPY19L2P1	NR_002833	human	genbank	54_36p	-1	provisional	rna	NULL	NULL	0.001	-	-	-	pseudogene
PHTF2	57157	genome.wustl.edu	36	7	77389987	77389987	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	7	77389987	77389987	C	T	SNP	PHTF2	NM_020432	human	genbank	54_36p	1	validated	missense	c.1075	p.R359W	1	NULL	-	-	no_errors
AKNA	80709	genome.wustl.edu	36	9	116179491	116179491	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	9	116179491	116179491	C	T	SNP	AKNA	NM_030767	human	genbank	54_36p	-1	validated	silent	c.417	p.E139	0.115	NULL	-	-	no_errors
UAP1L1	91373	genome.wustl.edu	36	9	139096287	139096287	+	Missense_Mutation	SNP	G	G	A	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	G	G	G	A	G	G	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	9	139096287	139096287	G	A	SNP	UAP1L1	NM_207309	human	genbank	54_36p	1	validated	missense	c.1012	p.D338N	0.953	NULL	-	-	no_errors
KIAA1797	54914	genome.wustl.edu	36	9	20705367	20705367	+	Silent	SNP	C	C	A	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	C	C	C	A	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	9	20705367	20705367	C	A	SNP	KIAA1797	NM_017794	human	genbank	54_36p	1	validated	silent	c.15	p.I5	1	NULL	HMMPfam_HEAT,superfamily_ARM repeat	-	no_errors
AGTPBP1	23287	genome.wustl.edu	36	9	87477343	87477343	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	9	87477343	87477343	C	T	SNP	AGTPBP1	NM_015239	human	genbank	54_36p	-1	validated	silent	c.510	p.L170	1	NULL	HMMPfam_Peptidase_M14,superfamily_ARM repeat,superfamily_Zn-dependent exopeptidases	-	no_errors
DAPK1	1612	genome.wustl.edu	36	9	89501872	89501872	+	Silent	SNP	C	C	T	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_III	Capture	454_PCR_WGA		dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	9	89501872	89501872	C	T	SNP	DAPK1	NM_004938	human	genbank	54_36p	1	reviewed	silent	c.2544	p.I848	1	NULL	HMMPfam_Death;HMMPfam_Pkinase;HMMPfam_Ank;superfamily_Ankyrin repeat;superfamily_Protein kinase-like (PK-like);superfamily_DEATH domain;superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
ODZ1	10178	genome.wustl.edu	36	X	123345669	123345669	+	Missense_Mutation	SNP	C	C	T	novel	Unknown	TCGA-25-1322-01A-01W-0494-09	TCGA-25-1322-10A-01W-0494-09	C	C	C	T	C	C	Unknown	Valid	Somatic	4	Capture	454_PCR_WGA	1	dbGAP	Illumina GAIIx	626f1798-fb15-4b01-8d8f-db19777d72e9	cd8be84a-2b01-491b-9427-b51a1e10786a	X	123345669	123345669	C	T	SNP	ODZ1	NM_014253	human	genbank	54_36p	-1	provisional	missense	c.6772	p.A2258T	0.982	HMMPfam_RHS_repeat	HMMPfam_NHL,HMMPfam_EGF,HMMPfam_RHS_repeat,superfamily_Carboxypeptidase regulatory domain,HMMPfam_Ten_N,superfamily_Nitrous oxide reductase N-terminal domain,HMMPfam_EGF_2,superfamily_NHL repeat,superfamily_EGF/Laminin	-	no_errors
