Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
BCL9L	283149	hgsc.bcm.edu	36	11	118277095	118277095	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-25-1631-01A-01W-0615-10	TCGA-25-1631-10A-01W-0615-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_III	WXS	none			SOLID	6226bdc6-5ffd-4c29-95fc-f29331d38a58	9f7b1d63-723c-413e-b205-50d718f9b7ba
DDHD1	80821	hgsc.bcm.edu	36	14	52594974	52594975	+	Frame_Shift_Del	DEL	GT	GT	-	novel		TCGA-25-1631-01A-01W-0615-10	TCGA-25-1631-10A-01W-0615-10	GT	GT	.	.	.	.	Unknown	Untested	Somatic	Phase_III	WXS	none			SOLID	6226bdc6-5ffd-4c29-95fc-f29331d38a58	9f7b1d63-723c-413e-b205-50d718f9b7ba
MYH2	4620	hgsc.bcm.edu	36	17	10375771	10375771	+	Silent	SNP	G	G	A	novel		TCGA-25-1631-01A-01W-0615-10	TCGA-25-1631-10A-01W-0615-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_III	WXS	none			SOLID	6226bdc6-5ffd-4c29-95fc-f29331d38a58	9f7b1d63-723c-413e-b205-50d718f9b7ba
NKAPL	222698	hgsc.bcm.edu	36	6	28336131	28336131	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-25-1631-01A-01W-0615-10	TCGA-25-1631-10A-01W-0615-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_III	WXS	none			SOLID	6226bdc6-5ffd-4c29-95fc-f29331d38a58	9f7b1d63-723c-413e-b205-50d718f9b7ba
OR10H2	26538	hgsc.bcm.edu	36	19	15700078	15700078	+	Silent	SNP	G	G	A	novel		TCGA-25-1631-01A-01W-0615-10	TCGA-25-1631-10A-01W-0615-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_III	WXS	none			SOLID	6226bdc6-5ffd-4c29-95fc-f29331d38a58	9f7b1d63-723c-413e-b205-50d718f9b7ba
OR2B11	127623	hgsc.bcm.edu	36	1	245681884	245681884	+	Frame_Shift_Del	DEL	G	G	-	novel		TCGA-25-1631-01A-01W-0615-10	TCGA-25-1631-10A-01W-0615-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_III	WXS	none			SOLID	6226bdc6-5ffd-4c29-95fc-f29331d38a58	9f7b1d63-723c-413e-b205-50d718f9b7ba
BMP5	653	hgsc.bcm.edu	36	6	55847362	55847362	+	Silent	SNP	G	G	T	novel		TCGA-25-1631-01A-01W-0615-10	TCGA-25-1631-10A-01W-0615-10	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	6226bdc6-5ffd-4c29-95fc-f29331d38a58	9f7b1d63-723c-413e-b205-50d718f9b7ba
CATSPER1	117144	hgsc.bcm.edu	36	11	65544913	65544913	+	Silent	SNP	G	G	A	novel		TCGA-25-1631-01A-01W-0615-10	TCGA-25-1631-10A-01W-0615-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	6226bdc6-5ffd-4c29-95fc-f29331d38a58	9f7b1d63-723c-413e-b205-50d718f9b7ba
CCL7	6354	hgsc.bcm.edu	36	17	29622313	29622313	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-25-1631-01A-01W-0615-10	TCGA-25-1631-10A-01W-0615-10	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	6226bdc6-5ffd-4c29-95fc-f29331d38a58	9f7b1d63-723c-413e-b205-50d718f9b7ba
FASTKD1	79675	hgsc.bcm.edu	36	2	170102782	170102782	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-25-1631-01A-01W-0615-10	TCGA-25-1631-10A-01W-0615-10	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	6226bdc6-5ffd-4c29-95fc-f29331d38a58	9f7b1d63-723c-413e-b205-50d718f9b7ba
HCN4	10021	hgsc.bcm.edu	36	15	71404530	71404530	+	Silent	SNP	C	C	T	novel		TCGA-25-1631-01A-01W-0615-10	TCGA-25-1631-10A-01W-0615-10	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	6226bdc6-5ffd-4c29-95fc-f29331d38a58	9f7b1d63-723c-413e-b205-50d718f9b7ba
LPAR3	23566	hgsc.bcm.edu	36	1	85052402	85052402	+	Silent	SNP	C	C	T	novel		TCGA-25-1631-01A-01W-0615-10	TCGA-25-1631-10A-01W-0615-10	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	6226bdc6-5ffd-4c29-95fc-f29331d38a58	9f7b1d63-723c-413e-b205-50d718f9b7ba
MAS1L	116511	hgsc.bcm.edu	36	6	29563331	29563331	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-25-1631-01A-01W-0615-10	TCGA-25-1631-10A-01W-0615-10	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	6226bdc6-5ffd-4c29-95fc-f29331d38a58	9f7b1d63-723c-413e-b205-50d718f9b7ba
MRPS22	56945	hgsc.bcm.edu	36	3	140552585	140552585	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-25-1631-01A-01W-0615-10	TCGA-25-1631-10A-01W-0615-10	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_III	WXS	454_PCR_WGA			SOLID	6226bdc6-5ffd-4c29-95fc-f29331d38a58	9f7b1d63-723c-413e-b205-50d718f9b7ba
ACAT2	39	hgsc.bcm.edu	36	6	160103950	160103950	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-25-1631-01A-01W-0615-10	TCGA-25-1631-10A-01W-0615-10	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	6226bdc6-5ffd-4c29-95fc-f29331d38a58	9f7b1d63-723c-413e-b205-50d718f9b7ba
AP1B1	162	hgsc.bcm.edu	36	22	28067638	28067638	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-25-1631-01A-01W-0615-10	TCGA-25-1631-10A-01W-0615-10	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	6226bdc6-5ffd-4c29-95fc-f29331d38a58	9f7b1d63-723c-413e-b205-50d718f9b7ba
CREBBP	1387	hgsc.bcm.edu	36	16	3730513	3730513	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-25-1631-01A-01W-0615-10	TCGA-25-1631-10A-01W-0615-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	6226bdc6-5ffd-4c29-95fc-f29331d38a58	9f7b1d63-723c-413e-b205-50d718f9b7ba
CYLC1	1538	hgsc.bcm.edu	36	X	83015076	83015076	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-25-1631-01A-01W-0615-10	TCGA-25-1631-10A-01W-0615-10	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	6226bdc6-5ffd-4c29-95fc-f29331d38a58	9f7b1d63-723c-413e-b205-50d718f9b7ba
GPR176	11245	hgsc.bcm.edu	36	15	37880665	37880665	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-25-1631-01A-01W-0615-10	TCGA-25-1631-10A-01W-0615-10	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	6226bdc6-5ffd-4c29-95fc-f29331d38a58	9f7b1d63-723c-413e-b205-50d718f9b7ba
MCM3AP	8888	hgsc.bcm.edu	36	21	46479757	46479757	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-25-1631-01A-01W-0615-10	TCGA-25-1631-10A-01W-0615-10	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	6226bdc6-5ffd-4c29-95fc-f29331d38a58	9f7b1d63-723c-413e-b205-50d718f9b7ba
NHS	4810	hgsc.bcm.edu	36	X	17660270	17660270	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-25-1631-01A-01W-0615-10	TCGA-25-1631-10A-01W-0615-10	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	6226bdc6-5ffd-4c29-95fc-f29331d38a58	9f7b1d63-723c-413e-b205-50d718f9b7ba
OPTN	10133	hgsc.bcm.edu	36	10	13206088	13206088	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-25-1631-01A-01W-0615-10	TCGA-25-1631-10A-01W-0615-10	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	6226bdc6-5ffd-4c29-95fc-f29331d38a58	9f7b1d63-723c-413e-b205-50d718f9b7ba
PKHD1	5314	hgsc.bcm.edu	36	6	51840795	51840795	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-25-1631-01A-01W-0615-10	TCGA-25-1631-10A-01W-0615-10	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	6226bdc6-5ffd-4c29-95fc-f29331d38a58	9f7b1d63-723c-413e-b205-50d718f9b7ba
SLC12A3	6559	hgsc.bcm.edu	36	16	55483539	55483539	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-25-1631-01A-01W-0615-10	TCGA-25-1631-10A-01W-0615-10	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	6226bdc6-5ffd-4c29-95fc-f29331d38a58	9f7b1d63-723c-413e-b205-50d718f9b7ba
SLC30A8	169026	hgsc.bcm.edu	36	8	118239252	118239252	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-25-1631-01A-01W-0615-10	TCGA-25-1631-10A-01W-0615-10	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	6226bdc6-5ffd-4c29-95fc-f29331d38a58	9f7b1d63-723c-413e-b205-50d718f9b7ba
TP53	7157	hgsc.bcm.edu	36	17	7520036	7520036	+	Splice_Site	SNP	C	C	A	novel		TCGA-25-1631-01A-01W-0615-10	TCGA-25-1631-10A-01W-0615-10	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	6226bdc6-5ffd-4c29-95fc-f29331d38a58	9f7b1d63-723c-413e-b205-50d718f9b7ba
ZFYVE9	9372	hgsc.bcm.edu	36	1	52571104	52571104	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-25-1631-01A-01W-0615-10	TCGA-25-1631-10A-01W-0615-10	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_III	WXS	Sanger_PCR_WGA			SOLID	6226bdc6-5ffd-4c29-95fc-f29331d38a58	9f7b1d63-723c-413e-b205-50d718f9b7ba
