Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
THRAP3	9967	broad.mit.edu	36	1	36527639	36527639	+	Missense_Mutation	SNP	C	C	A	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
KCNA10	3744	broad.mit.edu	36	1	110862799	110862799	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
GON4L	54856	broad.mit.edu	36	1	153993394	153993394	+	Silent	SNP	G	G	A	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
FMN2	56776	broad.mit.edu	36	1	238418141	238418141	+	Missense_Mutation	SNP	G	G	C	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
ATM	472	broad.mit.edu	36	11	107705108	107705108	+	Nonsense_Mutation	SNP	C	C	T	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
CD163L1	283316	broad.mit.edu	36	12	7476563	7476563	+	Missense_Mutation	SNP	T	T	C	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
ABCC9	10060	broad.mit.edu	36	12	21851660	21851660	+	Missense_Mutation	SNP	C	C	A	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
FAM113B	91523	broad.mit.edu	36	12	45916217	45916217	+	Silent	SNP	C	C	T	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
KRT4	3851	broad.mit.edu	36	12	51493696	51493696	+	Silent	SNP	G	G	A	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
KRT8	3856	broad.mit.edu	36	12	51579919	51579919	+	Silent	SNP	G	G	A	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
IQCD	115811	broad.mit.edu	36	12	112129788	112129788	+	Silent	SNP	C	C	T	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
RNF6	6049	broad.mit.edu	36	13	25687649	25687649	+	Missense_Mutation	SNP	T	T	C	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
OR11G2	390439	broad.mit.edu	36	14	19735809	19735809	+	Missense_Mutation	SNP	G	G	C	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
PRKD1	5587	broad.mit.edu	36	14	29177679	29177679	+	Silent	SNP	C	C	G	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
SERPINA3	12	broad.mit.edu	36	14	94159877	94159877	+	Missense_Mutation	SNP	C	C	G	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
ZKSCAN2	342357	broad.mit.edu	36	16	25165606	25165606	+	Missense_Mutation	SNP	T	T	A	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	T	T	A	A	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
PHKB	5257	broad.mit.edu	36	16	46180502	46180502	+	Silent	SNP	A	A	G	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	A	A	G	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
CDH3	1001	broad.mit.edu	36	16	67283312	67283312	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
KIAA1609	57707	broad.mit.edu	36	16	83077936	83077936	+	Missense_Mutation	SNP	T	T	C	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
TP53	7157	broad.mit.edu	36	17	7519131	7519131	+	Missense_Mutation	SNP	C	C	T	rs28934578	unknown	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
NCOR1	9611	broad.mit.edu	36	17	15936019	15936019	+	Missense_Mutation	SNP	T	T	C	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
CACNA1A	773	broad.mit.edu	36	19	13202003	13202003	+	Silent	SNP	G	G	A	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
RYR1	6261	broad.mit.edu	36	19	43672619	43672619	+	Missense_Mutation	SNP	G	G	T	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
PSG7	5676	broad.mit.edu	36	19	48125533	48125533	+	Missense_Mutation	SNP	G	G	T	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
KIR3DL1	3811	broad.mit.edu	36	19	60023210	60023210	+	Missense_Mutation	SNP	T	T	G	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	T	T	G	G	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
PXDN	7837	broad.mit.edu	36	2	1649200	1649200	+	Missense_Mutation	SNP	C	C	G	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
TTN	7273	broad.mit.edu	36	2	179150626	179150626	+	Missense_Mutation	SNP	T	T	C	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
GIGYF2	26058	broad.mit.edu	36	2	233364332	233364332	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
ZBP1	81030	broad.mit.edu	36	20	55621672	55621672	+	Missense_Mutation	SNP	A	A	G	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	A	A	G	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
CACNA1D	776	broad.mit.edu	36	3	53728820	53728820	+	Splice_Site	SNP	A	A	G	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	A	A	G	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
LRRC31	79782	broad.mit.edu	36	3	171061052	171061052	+	Missense_Mutation	SNP	G	G	C	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	G	G	C	C	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
KIAA1211	57482	broad.mit.edu	36	4	56876077	56876077	+	Missense_Mutation	SNP	C	C	G	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
ABLIM3	22885	broad.mit.edu	36	5	148576783	148576783	+	Silent	SNP	A	A	T	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	A	A	T	T	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
IGF2R	3482	broad.mit.edu	36	6	160430178	160430178	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
ELN	2006	broad.mit.edu	36	7	73107035	73107035	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
MUC17	140453	broad.mit.edu	36	7	100471957	100471957	+	Nonsense_Mutation	SNP	G	G	T	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
MPDZ	8777	broad.mit.edu	36	9	13196068	13196068	+	Missense_Mutation	SNP	T	T	C	novel	none	TCGA-25-2399-01A-01W-0799-08	TCGA-25-2399-10A-01W-0799-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	81db8053-94a3-4b15-ab83-ff16a77c7352	e6de10f2-fd09-4157-9cae-ce5b123cd448
