Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error
LOC100129064	0	genome.wustl.edu	36	5	343335	343335	+	RNA	SNP	T	T	G	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	5	343335	343335	T	G	SNP	LOC100129064	XR_038303	human	genbank	54_36p	-1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
SLC12A7	10723	genome.wustl.edu	36	5	1142099	1142099	+	Missense_Mutation	SNP	A	G	G	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	5	1142099	1142099	A	G	SNP	SLC12A7	NM_006598	human	genbank	54_36p	-1	validated	missense	c.487	p.C163R	0.998	HMMPfam_AA_permease	HMMPfam_AA_permease	-	no_errors
WDR37	22884	genome.wustl.edu	36	10	1160849	1160849	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	10	1160849	1160849	G	A	SNP	WDR37	NM_014023	human	genbank	54_36p	+1	reviewed	splice_site	c.1239-1	e12-1	1.000	-	-	-	no_errors
CREBBP	1387	genome.wustl.edu	36	16	3800722	3800722	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	16	3800722	3800722	C	A	SNP	CREBBP	NM_004380	human	genbank	54_36p	-1	reviewed	missense	c.858	p.Q286H	1.000	NULL	superfamily_TAZ_finger,HMMPfam_zf-TAZ,HMMSmart_ZnF_TAZ,HMMPfam_KIX,superfamily_KIX,superfamily_Bromodomain,HMMSmart_BROMO,HMMPfam_Bromodomain,PatternScan_BROMODOMAIN_1,HMMPfam_DUF902,HMMPfam_DUF906,HMMPfam_ZZ,HMMSmart_ZnF_ZZ,PatternScan_ZF_ZZ_1,HMMPfam_Creb_binding,superfamily_Nuc_recept_coact	-	no_errors
OR52A5	390054	genome.wustl.edu	36	11	5109548	5109548	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	11	5109548	5109548	G	A	SNP	OR52A5	NM_001005160	human	genbank	54_36p	-1	provisional	nonsense	c.901	p.Q301*	0.916	superfamily_SSF81321	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
LOC442132	442132	genome.wustl.edu	36	5	7354425	7354425	+	RNA	SNP	G	A	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	5	7354425	7354425	G	A	SNP	LOC442132	XR_040018	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.000	-	-	-	no_errors
TP53	7157	genome.wustl.edu	36	17	7519132	7519132	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	17	7519132	7519132	G	C	SNP	TP53	NM_000546	human	genbank	54_36p	-1	reviewed	missense	c.523	p.R175G	0.993	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors
DENND5A	23258	genome.wustl.edu	36	11	9148068	9148068	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	11	9148068	9148068	T	A	SNP	DENND5A	NM_015213	human	genbank	54_36p	-1	validated	missense	c.2062	p.T688S	1.000	NULL	HMMPfam_uDENN,HMMSmart_SM00800,HMMPfam_DENN,HMMSmart_SM00799,HMMPfam_dDENN,HMMSmart_SM00801,HMMPfam_RUN,HMMSmart_SM00593,superfamily_Lipase/lipooxygenase domain (PLAT/LH2 domain),HMMPfam_PLAT	-	no_errors
CAP2	10486	genome.wustl.edu	36	6	17534837	17534837	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	6	17534837	17534837	G	A	SNP	CAP2	NM_006366	human	genbank	54_36p	+1	reviewed	missense	c.159	p.M53I	1.000	HMMPfam_CAP_N,superfamily_N-terminal domain of adenylylcyclase associated protein CAP	HMMPfam_CAP_N,PatternScan_CAP_1,superfamily_N-terminal domain of adenylylcyclase associated protein CAP,PatternScan_ADH_IRON_2,superfamily_C-terminal domain of adenylylcyclase associated protein,HMMPfam_CAP_C,HMMSmart_SM00673,PatternScan_CAP_2	-	no_errors
LOC729722	729722	genome.wustl.edu	36	15	18353031	18353031	+	Silent	SNP	G	G	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	15	18353031	18353031	G	A	SNP	LOC729722	XM_001716538	human	genbank	54_36p	+1	model	silent	c.525	p.L175	0.000	NULL	HMMSmart_SM00248,HMMPfam_Ank,superfamily_Ankyrin repeat,PatternScan_ASP_PROTEASE	-	no_errors
LOC400013	400013	genome.wustl.edu	36	12	19986448	19986448	+	RNA	SNP	G	G	T	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	12	19986448	19986448	G	T	SNP	LOC400013	XR_017001	human	genbank	54_36p	+1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
LOC400013	400013	genome.wustl.edu	36	12	19987053	19987053	+	RNA	SNP	G	G	C	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	12	19987053	19987053	G	C	SNP	LOC400013	XR_017001	human	genbank	54_36p	+1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
NDN	4692	genome.wustl.edu	36	15	21483236	21483236	+	Silent	SNP	C	C	T	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	15	21483236	21483236	C	T	SNP	NDN	NM_002487	human	genbank	54_36p	-1	reviewed	silent	c.222	p.A74	0.958	NULL	HMMPfam_MAGE	-	no_errors
SLC7A8	23428	genome.wustl.edu	36	14	22676970	22676970	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	14	22676970	22676970	C	T	SNP	SLC7A8	NM_012244	human	genbank	54_36p	-1	validated	missense	c.1016	p.R339Q	1.000	HMMPfam_AA_permease	HMMPfam_AA_permease	-	no_errors
LOC100130746	0	genome.wustl.edu	36	5	24207176	24207176	+	RNA	SNP	C	C	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	5	24207176	24207176	C	A	SNP	LOC100130746	XR_038810	human	genbank	54_36p	+1	model	rna	NULL	NULL	0.231	-	-	-	pseudogene
MASTL	84930	genome.wustl.edu	36	10	27499101	27499101	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	10	27499101	27499101	G	C	SNP	MASTL	NM_032844	human	genbank	54_36p	+1	validated	missense	c.1207	p.E403Q	0.999	superfamily_Kinase_like	superfamily_Kinase_like,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ST,HMMSmart_S_TK_X	-	no_errors
PLA2G3	50487	genome.wustl.edu	36	22	29866221	29866221	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	22	29866221	29866221	G	C	SNP	PLA2G3	NM_015715	human	genbank	54_36p	-1	validated	missense	c.120	p.N40K	0.001	NULL	superfamily_Phospholipase A2 PLA2,HMMPfam_Phospholip_A2_2,PatternScan_PA2_HIS	-	no_errors
NOL4	8715	genome.wustl.edu	36	18	29963891	29963891	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	18	29963891	29963891	G	T	SNP	NOL4	NM_003787	human	genbank	54_36p	-1	validated	missense	c.356	p.T119K	1.000	NULL	NULL	-	no_errors
KRTAP27-1	643812	genome.wustl.edu	36	21	30631405	30631405	+	Silent	SNP	G	G	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	21	30631405	30631405	G	A	SNP	KRTAP27-1	NM_001077711	human	genbank	54_36p	-1	provisional	silent	c.453	p.F151	0.122	HMMPfam_PMG	HMMPfam_PMG	-	no_errors
ITGAD	3681	genome.wustl.edu	36	16	31336973	31336973	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	16	31336973	31336973	G	A	SNP	ITGAD	NM_005353	human	genbank	54_36p	+1	validated	missense	c.2576	p.R859H	0.933	HMMPfam_Integrin_alpha2,superfamily_Integrin domains	superfamily_Integrin alpha N-terminal domain,HMMSmart_SM00191,superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA,HMMPfam_FG-GAP,HMMPfam_Integrin_alpha2,superfamily_Integrin domains,PatternScan_INTEGRIN_ALPHA,HMMPfam_Integrin_alpha	-	no_errors
CEP250	11190	genome.wustl.edu	36	20	33562667	33562667	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	20	33562667	33562667	G	A	SNP	CEP250	NM_007186	human	genbank	54_36p	+1	reviewed	missense	c.7127	p.R2376H	0.126	NULL	superfamily_Prefoldin	-	no_errors
SSTR3	6753	genome.wustl.edu	36	22	35933318	35933318	+	Silent	SNP	A	G	G	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	22	35933318	35933318	A	G	SNP	SSTR3	NM_001051	human	genbank	54_36p	-1	reviewed	silent	c.471	p.A157	0.004	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
LRRK2	120892	genome.wustl.edu	36	12	38979279	38979279	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	12	38979279	38979279	A	C	SNP	LRRK2	NM_198578	human	genbank	54_36p	+1	reviewed	missense	c.3449	p.E1150A	0.362	superfamily_SSF52058,HMMPfam_LRR_1	superfamily_ARM-type_fold,superfamily_SSF52058,HMMPfam_LRR_1,superfamily_SSF52540,HMMPfam_Miro,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ST,superfamily_WD40_like,HMMSmart_WD40,PatternScan_RCC1_2	-	no_errors
FAM187B	148109	genome.wustl.edu	36	19	40407790	40407790	+	Silent	SNP	G	G	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	19	40407790	40407790	G	A	SNP	FAM187B	NM_152481	human	genbank	54_36p	-1	provisional	silent	c.888	p.F296	0.295	NULL	NULL	-	no_errors
PIGT	51604	genome.wustl.edu	36	20	43481586	43481586	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	20	43481586	43481586	A	G	SNP	PIGT	NM_015937	human	genbank	54_36p	+1	reviewed	missense	c.623	p.D208G	1.000	HMMPfam_Gpi16	HMMPfam_Gpi16	-	no_errors
MAP3K10	4294	genome.wustl.edu	36	19	45403027	45403027	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	19	45403027	45403027	T	C	SNP	MAP3K10	NM_002446	human	genbank	54_36p	+1	reviewed	missense	c.1172	p.L391P	1.000	NULL	superfamily_SH3,HMMPfam_SH3_1,HMMSmart_SH3,superfamily_Kinase_like,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors
LOC648279	648279	genome.wustl.edu	36	12	48070154	48070154	+	RNA	SNP	C	C	T	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	12	48070154	48070154	C	T	SNP	LOC648279	XR_039433	human	genbank	54_36p	+1	model	rna	NULL	NULL	0.003	-	-	-	pseudogene
SLC5A9	200010	genome.wustl.edu	36	1	48485623	48485623	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	1	48485623	48485623	T	C	SNP	SLC5A9	NM_001011547	human	genbank	54_36p	+1	validated	missense	c.1921	p.W641R	0.376	NULL	HMMPfam_SSF,PatternScan_NA_SOLUT_SYMP_1	-	no_errors
ITGA1	3672	genome.wustl.edu	36	5	52237488	52237488	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	5	52237488	52237488	G	C	SNP	ITGA1	NM_181501	human	genbank	54_36p	+1	reviewed	missense	c.1448	p.G483A	1.000	superfamily_SSF69318	superfamily_SSF69318,HMMSmart_Int_alpha,superfamily_SSF53300,HMMSmart_VWA,HMMPfam_VWA,HMMPfam_FG-GAP,HMMPfam_Integrin_alpha2,superfamily_SSF69179,PatternScan_INTEGRIN_ALPHA	-	no_errors
OR8I2	120586	genome.wustl.edu	36	11	55618059	55618059	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	11	55618059	55618059	C	A	SNP	OR8I2	NM_001003750	human	genbank	54_36p	+1	provisional	missense	c.700	p.Q234K	0.007	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
STAT6	6778	genome.wustl.edu	36	12	55782895	55782895	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	12	55782895	55782895	T	C	SNP	STAT6	NM_003153	human	genbank	54_36p	-1	reviewed	missense	c.1289	p.N430S	1.000	HMMPfam_STAT_bind,superfamily_p53-like transcription factors	superfamily_Transcription factor STAT-4 N-domain,HMMPfam_STAT_int,HMMPfam_STAT_alpha,superfamily_STAT,HMMPfam_STAT_bind,superfamily_p53-like transcription factors,superfamily_SH2 domain,HMMPfam_SH2,HMMSmart_SM00252	-	no_errors
ZNF528	84436	genome.wustl.edu	36	19	57611194	57611194	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	19	57611194	57611194	G	A	SNP	ZNF528	NM_032423	human	genbank	54_36p	+1	validated	missense	c.1277	p.R426Q	0.000	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
NLRP8	126205	genome.wustl.edu	36	19	61151352	61151352	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	19	61151352	61151352	G	A	SNP	NLRP8	NM_176811	human	genbank	54_36p	+1	provisional	missense	c.272	p.R91H	0.002	superfamily_DEATH domain,HMMPfam_PAAD_DAPIN	superfamily_DEATH domain,HMMPfam_PAAD_DAPIN,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_NACHT,superfamily_RNI-like,HMMSmart_SM00368	-	no_errors
IQCH	64799	genome.wustl.edu	36	15	65468376	65468376	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	15	65468376	65468376	C	G	SNP	IQCH	NM_001031715	human	genbank	54_36p	+1	provisional	missense	c.1610	p.P537R	1.000	NULL	HMMPfam_IQ	-	no_errors
DNAJC6	9829	genome.wustl.edu	36	1	65640136	65640136	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	1	65640136	65640136	G	A	SNP	DNAJC6	NM_014787	human	genbank	54_36p	+1	validated	missense	c.2041	p.D681N	1.000	NULL	superfamily_(Phosphotyrosine protein) phosphatases II,HMMPfam_PTEN_C2,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),superfamily_Chaperone J-domain,HMMSmart_SM00271,HMMPfam_DnaJ	-	no_errors
CORO2B	10391	genome.wustl.edu	36	15	66805344	66805344	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	15	66805344	66805344	C	T	SNP	CORO2B	NM_006091	human	genbank	54_36p	+1	validated	missense	c.1420	p.R474C	1.000	NULL	HMMPfam_DUF1899,superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_WD_REPEATS_1,HMMPfam_DUF1900	-	no_errors
SERBP1	26135	genome.wustl.edu	36	1	67668443	67668443	+	Silent	SNP	C	C	T	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	1	67668443	67668443	C	T	SNP	SERBP1	NM_001018067	human	genbank	54_36p	-1	validated	silent	c.129	p.G43	1.000	NULL	HMMPfam_HABP4_PAI-RBP1	-	no_errors
UGT2B28	54490	genome.wustl.edu	36	4	70195048	70195048	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	4	70195048	70195048	G	A	SNP	UGT2B28	NM_053039	human	genbank	54_36p	+1	provisional	missense	c.1522	p.V508I	0.000	HMMPfam_UDPGT	superfamily_UDP-Glycosyltransferase/glycogen phosphorylase,HMMPfam_UDPGT,PatternScan_UDPGT	-	no_errors
CSN2	1447	genome.wustl.edu	36	4	70857628	70857628	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	4	70857628	70857628	T	C	SNP	CSN2	NM_001891	human	genbank	54_36p	-1	validated	missense	c.628	p.I210V	0.000	HMMPfam_Casein	PatternScan_CASEIN_ALPHA_BETA,HMMPfam_Casein	-	no_errors
ADAMTS3	9508	genome.wustl.edu	36	4	73373438	73373438	+	Silent	SNP	G	G	C	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	4	73373438	73373438	G	C	SNP	ADAMTS3	NM_014243	human	genbank	54_36p	-1	reviewed	silent	c.2943	p.T981	1.000	superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1	"HMMPfam_Pep_M12B_propep,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Reprolysin,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMPfam_ADAM_spacer1"	-	no_errors
VCL	7414	genome.wustl.edu	36	10	75537099	75537099	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	10	75537099	75537099	C	G	SNP	VCL	NM_014000	human	genbank	54_36p	+1	reviewed	missense	c.2540	p.P847R	1.000	HMMPfam_Vinculin,superfamily_alpha-catenin/vinculin	superfamily_alpha-catenin/vinculin,HMMPfam_Vinculin,PatternScan_VINCULIN_1,PatternScan_VINCULIN_2	-	no_errors
LOC286157	286157	genome.wustl.edu	36	8	75678914	75678914	+	RNA	SNP	C	C	T	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	8	75678914	75678914	C	T	SNP	LOC286157	XR_038608	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.832	-	-	-	pseudogene
ACADM	34	genome.wustl.edu	36	1	75988723	75988723	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	1	75988723	75988723	G	A	SNP	ACADM	NM_000016	human	genbank	54_36p	+1	reviewed	splice_site	c.850-1	e10-1	1.000	-	-	-	no_errors
CENPN	55839	genome.wustl.edu	36	16	79623743	79623743	+	Silent	SNP	G	G	T	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	16	79623743	79623743	G	T	SNP	CENPN	NM_001100625	human	genbank	54_36p	+1	validated	silent	c.1005	p.P335	0.012	HMMPfam_CHL4	HMMPfam_CHL4	-	no_errors
ADAMTSL3	57188	genome.wustl.edu	36	15	82442310	82442310	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	15	82442310	82442310	G	A	SNP	ADAMTSL3	NM_207517	human	genbank	54_36p	+1	validated	missense	c.2926	p.D976N	0.993	HMMPfam_I-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408	superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMPfam_I-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,HMMPfam_PLAC	-	no_errors
MBTPS1	8720	genome.wustl.edu	36	16	82676179	82676179	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	16	82676179	82676179	C	T	SNP	MBTPS1	NM_003791	human	genbank	54_36p	-1	reviewed	missense	c.1196	p.R399Q	1.000	superfamily_Pept_S8_S53,HMMPfam_Peptidase_S8	PatternScan_SUBTILASE_ASP,superfamily_Pept_S8_S53,HMMPfam_Peptidase_S8,PatternScan_SUBTILASE_HIS,PatternScan_SUBTILASE_SER	-	no_errors
SYNCRIP	10492	genome.wustl.edu	36	6	86381336	86381336	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	6	86381336	86381336	G	A	SNP	SYNCRIP	NM_006372	human	genbank	54_36p	-1	provisional	missense	c.1729	p.R577W	1.000	NULL	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	-	no_errors
EPHA3	2042	genome.wustl.edu	36	3	89539143	89539143	+	Silent	SNP	C	C	T	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	3	89539143	89539143	C	T	SNP	EPHA3	NM_005233	human	genbank	54_36p	+1	reviewed	silent	c.1629	p.V543	0.087	NULL	superfamily_Galactose-binding domain-like,HMMPfam_Ephrin_lbd,HMMSmart_SM00615,PatternScan_RECEPTOR_TYR_KIN_V_1,PatternScan_RECEPTOR_TYR_KIN_V_2,PatternScan_EGF_2,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR,HMMSmart_SM00454,HMMPfam_SAM_2,superfamily_SAM/Pointed domain	-	no_errors
FAT3	120114	genome.wustl.edu	36	11	92172907	92172907	+	Silent	SNP	C	C	T	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	11	92172907	92172907	C	T	SNP	FAT3	NM_001008781	human	genbank	54_36p	+1	validated	silent	c.7080	p.C2360	0.976	superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Concanavalin A-like lectins/glucanases,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMSmart_SM00282,HMMPfam_Laminin_G_2,HMMSmart_SM00179,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_CA,PatternScan_ASX_HYDROXYL,PatternScan_EGF_2	-	no_errors
LOC400061	400061	genome.wustl.edu	36	12	93439855	93439855	+	RNA	SNP	C	C	T	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	12	93439855	93439855	C	T	SNP	LOC400061	XR_016608	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.007	-	-	-	pseudogene
LTA4H	4048	genome.wustl.edu	36	12	94939046	94939046	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	12	94939046	94939046	C	A	SNP	LTA4H	NM_000895	human	genbank	54_36p	-1	provisional	missense	c.586	p.V196F	1.000	superfamily_Leukotriene A4 hydrolase N-terminal domain,HMMPfam_Peptidase_M1	"superfamily_Leukotriene A4 hydrolase N-terminal domain,HMMPfam_Peptidase_M1,superfamily_Metalloproteases (""zincins"") catalytic domain,superfamily_ARM repeat,HMMPfam_Leuk-A4-hydro_C"	-	no_errors
LOC100131859	0	genome.wustl.edu	36	7	98878537	98878537	+	RNA	SNP	G	G	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	7	98878537	98878537	G	A	SNP	LOC100131859	XR_039392	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.521	-	-	-	pseudogene
FBXL4	26235	genome.wustl.edu	36	6	99428887	99428887	+	Silent	SNP	G	G	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	6	99428887	99428887	G	A	SNP	FBXL4	NM_012160	human	genbank	54_36p	-1	reviewed	silent	c.1854	p.S618	1.000	NULL	superfamily_SSF81383,HMMPfam_F-box,HMMSmart_FBOX,superfamily_SSF52047,HMMSmart_LRR_CC	-	no_errors
DRP2	1821	genome.wustl.edu	36	X	100390221	100390221	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	X	100390221	100390221	C	T	SNP	DRP2	NM_001939	human	genbank	54_36p	+1	validated	missense	c.1517	p.T506M	0.996	superfamily_SSF47473	HMMSmart_SPEC,superfamily_Spectrin,HMMPfam_Spectrin,superfamily_WW_Rsp5_WWP,HMMSmart_WW,HMMPfam_WW,PatternScan_WW_DOMAIN_1,superfamily_SSF47473,HMMPfam_efhand_1,HMMPfam_efhand_2,HMMPfam_ZZ,HMMSmart_ZnF_ZZ,PatternScan_ZF_ZZ_1	-	no_errors
MUC17	140453	genome.wustl.edu	36	7	100465020	100465020	+	Silent	SNP	T	T	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	7	100465020	100465020	T	A	SNP	MUC17	NM_001040105	human	genbank	54_36p	+1	provisional	silent	c.3603	p.P1201	0.000	NULL	superfamily_EGF/Laminin,PatternScan_EGF_1,superfamily_SEA domain,HMMSmart_SM00200,HMMPfam_SEA	-	no_errors
FILIP1L	11259	genome.wustl.edu	36	3	101052330	101052330	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	3	101052330	101052330	C	G	SNP	FILIP1L	NM_182909	human	genbank	54_36p	-1	validated	missense	c.880	p.E294Q	0.989	HMMPfam_CortBP2	HMMPfam_CortBP2,superfamily_Prefoldin	-	no_errors
FNDC7	163479	genome.wustl.edu	36	1	109072832	109072832	+	Silent	SNP	T	T	C	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	1	109072832	109072832	T	C	SNP	FNDC7	ENST00000370017	human	ensembl	54_36p	+1	known	silent	c.1014	p.N338	0.001	HMMSmart_SM00060,superfamily_Fibronectin type III	superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	-	no_errors
PLCXD2	257068	genome.wustl.edu	36	3	112909520	112909520	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	3	112909520	112909520	A	G	SNP	PLCXD2	NM_153268	human	genbank	54_36p	+1	validated	missense	c.221	p.Q74R	1.000	superfamily_PLC-like_Pdiesterase_TIM-brl	superfamily_PLC-like_Pdiesterase_TIM-brl	-	no_errors
PHLDB2	90102	genome.wustl.edu	36	3	113085990	113085990	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	3	113085990	113085990	G	C	SNP	PHLDB2	NM_145753	human	genbank	54_36p	+1	validated	missense	c.376	p.A126P	0.994	NULL	superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH	-	no_errors
CAMK2D	817	genome.wustl.edu	36	4	114598044	114598044	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	4	114598044	114598044	C	T	SNP	CAMK2D	NM_001221	human	genbank	54_36p	-1	reviewed	missense	c.1329	p.M443I	1.000	superfamily_Protein kinase-like (PK-like),HMMPfam_CaMKII_AD	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,HMMPfam_CaMKII_AD	-	no_errors
PNLIPRP2	5408	genome.wustl.edu	36	10	118391637	118391637	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	10	118391637	118391637	A	G	SNP	PNLIPRP2	NM_005396	human	genbank	54_36p	+1	validated	missense	c.1202	p.Q401R	0.003	NULL	NULL	-	pseudogene:no_stop_codon:bad_bp_length_for_coding_region
COL14A1	7373	genome.wustl.edu	36	8	121367352	121367352	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	8	121367352	121367352	C	A	SNP	COL14A1	NM_021110	human	genbank	54_36p	+1	validated	missense	c.4039	p.P1347T	1.000	HMMSmart_SM00210,superfamily_Concanavalin A-like lectins/glucanases	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA,HMMSmart_SM00210,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Collagen	-	no_errors
QRFPR	84109	genome.wustl.edu	36	4	122470306	122470306	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	4	122470306	122470306	C	A	SNP	QRFPR	NM_198179	human	genbank	54_36p	-1	validated	missense	c.909	p.K303N	0.991	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
EIF2B1	1967	genome.wustl.edu	36	12	122672352	122672352	+	Silent	SNP	G	G	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	12	122672352	122672352	G	A	SNP	EIF2B1	NM_001414	human	genbank	54_36p	-1	validated	silent	c.822	p.D274	1.000	superfamily_NagB/RpiA/CoA transferase-like,HMMPfam_IF-2B	superfamily_NagB/RpiA/CoA transferase-like,HMMPfam_IF-2B	-	no_errors
FLJ30058	158763	genome.wustl.edu	36	X	130048281	130048281	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	X	130048281	130048281	C	T	SNP	FLJ30058	NM_144967	human	genbank	54_36p	+1	validated	missense	c.1447	p.R483W	0.447	NULL	superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP	-	no_errors
DOLK	22845	genome.wustl.edu	36	9	130749064	130749064	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	9	130749064	130749064	C	T	SNP	DOLK	NM_014908	human	genbank	54_36p	-1	validated	missense	c.340	p.V114M	1.000	NULL	NULL	-	no_errors
COL29A1	256076	genome.wustl.edu	36	3	131645090	131645090	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	3	131645090	131645090	G	A	SNP	COL29A1	NM_153264	human	genbank	54_36p	+1	validated	missense	c.685	p.D229N	0.000	NULL	HMMSmart_VWA,superfamily_SSF53300,HMMPfam_VWA	-	no_errors
LATS1	9113	genome.wustl.edu	36	6	150039480	150039480	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	6	150039480	150039480	A	T	SNP	LATS1	NM_004690	human	genbank	54_36p	-1	reviewed	missense	c.2680	p.L894I	0.991	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase	superfamily_UBA-like,HMMPfam_UBA,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ST,HMMPfam_Pkinase_C	-	no_errors
DAP3	7818	genome.wustl.edu	36	1	153967780	153967780	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	1	153967780	153967780	G	T	SNP	DAP3	NM_004632	human	genbank	54_36p	+1	reviewed	nonsense	c.853	p.E285*	1.000	HMMPfam_DAP3	HMMPfam_DAP3	-	no_errors
SYT11	23208	genome.wustl.edu	36	1	154104757	154104757	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	1	154104757	154104757	A	T	SNP	SYT11	NM_152280	human	genbank	54_36p	+1	validated	missense	c.412	p.S138C	0.949	NULL	superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_C2	-	no_errors
LPA	4018	genome.wustl.edu	36	6	160952727	160952727	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	6	160952727	160952727	C	A	SNP	LPA	NM_005577	human	genbank	54_36p	-1	validated	missense	c.2460	p.R820S	0.564	superfamily_Kringle-like	superfamily_Kringle-like,HMMSmart_SM00130,HMMPfam_Kringle,PatternScan_KRINGLE_1,superfamily_Trypsin-like serine proteases,HMMSmart_SM00020,HMMPfam_Trypsin,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	-	no_errors
ODZ2	57451	genome.wustl.edu	36	5	167622185	167622185	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	5	167622185	167622185	C	T	SNP	ODZ2	ENST00000388903	human	ensembl	54_36p	+1	known	missense	c.8114	p.T2705M	0.126	NULL	HMMPfam_Ten_N,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF_2,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Carboxypeptidase regulatory domain,superfamily_NHL repeat,HMMPfam_NHL,HMMPfam_RHS_repeat	-	no_errors
METTL13	51603	genome.wustl.edu	36	1	170032415	170032415	+	Silent	SNP	C	C	T	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	1	170032415	170032415	C	T	SNP	METTL13	NM_015935	human	genbank	54_36p	+1	validated	silent	c.1996	p.L666	0.338	superfamily_S-adenosyl-L-methionine-dependent methyltransferases	superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_Methyltransf_11	-	no_errors
TTN	7273	genome.wustl.edu	36	2	179127933	179127933	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	2	179127933	179127933	A	T	SNP	TTN	ENST00000375038	human	ensembl	54_36p	-1	known	missense	c.76442	p.I25481N	1.000	superfamily_Concanavalin A-like lectins/glucanases,superfamily_vWA-like,superfamily_WD40 repeat-like,superfamily_Positive stranded ssRNA viruses,superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,superfamily_Concanavalin A-like lectins/glucanases,superfamily_vWA-like,superfamily_WD40 repeat-like,superfamily_Positive stranded ssRNA viruses,HMMPfam_Titin_Z,HMMSmart_SM00406,PatternScan_IG_MHC,HMMPfam_PPAK,HMMPfam_ig,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_TYR	-	no_errors
SORBS2	8470	genome.wustl.edu	36	4	186781074	186781074	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	4	186781074	186781074	C	T	SNP	SORBS2	NM_021069	human	genbank	54_36p	-1	reviewed	missense	c.2491	p.G831S	0.002	NULL	HMMPfam_Sorb,HMMSmart_SM00459,PatternScan_ZINC_FINGER_C2H2_1,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326	-	no_errors
COL5A2	1290	genome.wustl.edu	36	2	189641198	189641198	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	2	189641198	189641198	G	A	SNP	COL5A2	NM_000393	human	genbank	54_36p	-1	reviewed	missense	c.1301	p.T434M	0.949	HMMPfam_Collagen	HMMPfam_VWC,HMMSmart_VWC,PatternScan_VWFC_1,HMMPfam_Collagen,HMMSmart_COLFI,HMMPfam_COLFI	-	no_errors
CACNA1S	779	genome.wustl.edu	36	1	199313674	199313674	+	Silent	SNP	G	G	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	1	199313674	199313674	G	A	SNP	CACNA1S	NM_000069	human	genbank	54_36p	-1	reviewed	silent	c.1575	p.S525	0.995	superfamily_SSF81324,HMMPfam_Ion_trans	superfamily_SSF81324,HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ	-	no_errors
CASP8	841	genome.wustl.edu	36	2	201858282	201858282	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	2	201858282	201858282	C	T	SNP	CASP8	NM_001080125	human	genbank	54_36p	+1	reviewed	missense	c.1478	p.P493L	0.997	superfamily_Caspase-like,HMMSmart_SM00115,HMMPfam_Peptidase_C14	superfamily_DEATH domain,HMMSmart_SM00031,HMMPfam_DED,superfamily_Caspase-like,HMMSmart_SM00115,HMMPfam_Peptidase_C14,PatternScan_CASPASE_HIS,PatternScan_CASPASE_CYS	-	no_errors
KCNH1	3756	genome.wustl.edu	36	1	209259167	209259167	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	1	209259167	209259167	T	A	SNP	KCNH1	NM_172362	human	genbank	54_36p	-1	reviewed	missense	c.613	p.T205S	1.000	NULL	superfamily_PYP-like sensor domain (PAS domain),HMMSmart_SM00086,superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,superfamily_cAMP-binding domain-like,HMMSmart_SM00100,HMMPfam_cNMP_binding	-	no_errors
MAP2	4133	genome.wustl.edu	36	2	210226360	210226360	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	2	210226360	210226360	G	A	SNP	MAP2	NM_002374	human	genbank	54_36p	+1	reviewed	missense	c.221	p.G74E	1.000	NULL	HMMPfam_RII_binding_1,HMMPfam_MAP2_projctn,HMMPfam_Tubulin-binding,PatternScan_TAU_MAP	-	no_errors
EPHX1	2052	genome.wustl.edu	36	1	224093152	224093152	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	1	224093152	224093152	T	A	SNP	EPHX1	NM_000120	human	genbank	54_36p	+1	reviewed	missense	c.539	p.V180D	1.000	superfamily_SSF53474,HMMPfam_Abhydrolase_1	superfamily_SSF53474,HMMPfam_EHN,HMMPfam_Abhydrolase_1	-	no_errors
NEU2	4759	genome.wustl.edu	36	2	233607323	233607323	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	2	233607323	233607323	G	A	SNP	NEU2	NM_005383	human	genbank	54_36p	+1	reviewed	missense	c.455	p.R152Q	0.000	superfamily_Sialidase	superfamily_Sialidase	-	no_errors
KRT10	3858	genome.wustl.edu	36	17	36228834	36228845	+	In_Frame_Del	DEL	GCCGCCGTGGCC	GCCGCCGTGGCC	-	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	GCCGCCGTGGCC	GCCGCCGTGGCC					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	17	36228834	36228845	GCCGCCGTGGCC	-	DEL	KRT10	NM_000421	human	genbank	54_36p	-1	reviewed	in_frame_del	c.1479_1468	p.GHGG490in_frame_del	0.000:0.000:0.000:0.001:0.022:0.019:0.015:0.010:0.005:0.015:0.064:0.069	NULL	HMMPfam_Filament,superfamily_Prefoldin,PatternScan_IF	(deletion:cds_exon[36228565,36228939])	no_errors
LOC100132430	0	genome.wustl.edu	36	14	49430922	49430924	+	RNA	DEL	TTT	TTT	-	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	TTT	TTT					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	14	49430922	49430924	TTT	-	DEL	LOC100132430	XR_038888	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.000:0.013:0.002	-	-	(deletion:rna[49430514,49433522])	pseudogene
CSRNP2	81566	genome.wustl.edu	36	12	49747741	49747744	+	Frame_Shift_Del	DEL	CTGG	CTGG	-	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	CTGG	CTGG					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	12	49747741	49747744	CTGG	-	DEL	CSRNP2	NM_030809	human	genbank	54_36p	-1	provisional	frame_shift_del	c.690_687	p.S229fs	1.000:1.000:1.000:0.999	NULL	NULL	(deletion:cds_exon[49747723,49748019])	no_errors
CSRNP2	81566	genome.wustl.edu	36	12	49747751	49747755	+	Frame_Shift_Del	DEL	GCACA	GCACA	-	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	GCACA	GCACA					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	12	49747751	49747755	GCACA	-	DEL	CSRNP2	NM_030809	human	genbank	54_36p	-1	provisional	frame_shift_del	c.680_676	p.C226fs	1.000:1.000:1.000:1.000:1.000	NULL	NULL	(deletion:cds_exon[49747723,49748019])	no_errors
LOC646791	646791	genome.wustl.edu	36	15	73402019	73402040	+	RNA	DEL	GGCGGCGCGGTCCTGGGTGGCG	GGCGGCGCGGTCCTGGGTGGCG	-	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	GGCGGCGCGGTCCTGGGTGGCG	GGCGGCGCGGTCCTGGGTGGCG					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	15	73402019	73402040	GGCGGCGCGGTCCTGGGTGGCG	-	DEL	LOC646791	XR_017650	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.004:0.001:0.001:0.000:0.001:0.000:0.001:0.001:0.002:0.003:0.002:0.001:0.001:0.000:0.000:0.000:0.001:0.000:0.000:0.001:0.001:0.007	-	-	(deletion:rna[73401167,73402105])	no_errors
CENPF	1063	genome.wustl.edu	36	1	212881845	212881848	+	Frame_Shift_Del	DEL	AGAG	AGAG	-	novel	unknown	TCGA-29-1699-01A-01W-0633-09	TCGA-29-1699-10A-01W-0633-09	AGAG	AGAG					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	9db2682f-aa52-4b1f-b4bc-047084a9aac5	1aafabff-3396-4bf7-85c6-b43cd48003a0	1	212881845	212881848	AGAG	-	DEL	CENPF	NM_016343	human	genbank	54_36p	+1	reviewed	frame_shift_del	c.3541_3544	p.E1182fs	0.831:0.255:0.250:0.321	NULL	HMMPfam_Cenp-F_N,superfamily_Spectrin repeat,HMMPfam_Cenp-F_leu_zip,superfamily_Prefoldin,HMMPfam_Rb-bdg_C_Cenp-F	(deletion:cds_exon[212879887,212883290])	no_errors
