Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error
LOC644026	644026	genome.wustl.edu	36	X	404552	404552	+	Silent	SNP	C	T	T	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	X	404552	404552	C	T	SNP	LOC644026	XM_001714036	human	genbank	54_36p	-1	model	silent	c.867	p.S289	0.667	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon
ARHGEF10	9639	genome.wustl.edu	36	8	1869417	1869417	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	8	1869417	1869417	G	A	SNP	ARHGEF10	NM_014629	human	genbank	54_36p	+1	reviewed	missense	c.3124	p.V1042I	0.996	superfamily_WD40_like	superfamily_DH-domain,HMMPfam_RhoGEF,HMMSmart_RhoGEF,superfamily_SSF50729,superfamily_WD40_like,PatternScan_THIOL_PROTEASE_HIS	-	no_errors
TJP3	27134	genome.wustl.edu	36	19	3691719	3691719	+	Nonsense_Mutation	SNP	C	T	T	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	19	3691719	3691719	C	T	SNP	TJP3	NM_014428	human	genbank	54_36p	+1	provisional	nonsense	c.1900	p.Q634*	0.998	HMMSmart_SM00072,superfamily_P-loop containing nucleoside triphosphate hydrolases	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_SH3-domain,HMMSmart_SM00326,HMMPfam_SH3_2,HMMSmart_SM00072,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
SLC25A41	284427	genome.wustl.edu	36	19	6378481	6378481	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	19	6378481	6378481	G	T	SNP	SLC25A41	NM_173637	human	genbank	54_36p	-1	validated	missense	c.656	p.T219K	0.982	superfamily_Mitochondrial carrier,HMMPfam_Mito_carr	superfamily_Mitochondrial carrier,HMMPfam_Mito_carr	-	no_errors
TPI1	7167	genome.wustl.edu	36	12	6849488	6849488	+	Silent	SNP	C	C	T	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	12	6849488	6849488	C	T	SNP	TPI1	NM_000365	human	genbank	54_36p	+1	provisional	silent	c.558	p.H186	0.995	superfamily_Triosephosphate isomerase (TIM),HMMPfam_TIM	superfamily_Triosephosphate isomerase (TIM),HMMPfam_TIM,PatternScan_TIM	-	no_errors
TP53	7157	genome.wustl.edu	36	17	7514760	7514760	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	17	7514760	7514760	T	C	SNP	TP53	NM_000546	human	genbank	54_36p	-1	reviewed	splice_site	c.994-2	e9-2	1.000	-	-	-	no_errors
LOC100132755	0	genome.wustl.edu	36	Y	10647825	10647825	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	Y	10647825	10647825	T	C	SNP	LOC100132755	XM_001713806	human	genbank	54_36p	+1	model	missense	c.20	p.I7T	1.000	NULL	NULL	-	no_errors
ENSG00000222088	0	genome.wustl.edu	36	Y	10647856	10647856	+	RNA	SNP	G	G	A	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	Y	10647856	10647856	G	A	SNP	ENSG00000222088	ENST00000410156	human	ensembl	54_36p	+1	novel	rna	NULL	NULL	1.000	-	-	-	no_errors
GFOD1	54438	genome.wustl.edu	36	6	13473826	13473826	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	6	13473826	13473826	C	G	SNP	GFOD1	NM_018988	human	genbank	54_36p	-1	provisional	missense	c.301	p.A101P	1.000	superfamily_NAD(P)-binding Rossmann-fold domains	HMMPfam_GFO_IDH_MocA,superfamily_NAD(P)-binding Rossmann-fold domains,superfamily_Glyceraldehyde-3-phosphate dehydrogenase-like C-terminal domain,HMMPfam_GFO_IDH_MocA_C	-	no_errors
CLCNKB	1188	genome.wustl.edu	36	1	16250826	16250826	+	Silent	SNP	C	C	T	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	1	16250826	16250826	C	T	SNP	CLCNKB	NM_000085	human	genbank	54_36p	+1	validated	silent	c.1332	p.L444	0.001	superfamily_Clc chloride channel,HMMPfam_Voltage_CLC	superfamily_Clc chloride channel,HMMPfam_Voltage_CLC,superfamily_CBS-domain,HMMPfam_CBS,HMMSmart_SM00116	-	no_errors
NHLRC1	378884	genome.wustl.edu	36	6	18230505	18230505	+	Silent	SNP	A	A	G	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	6	18230505	18230505	A	G	SNP	NHLRC1	NM_198586	human	genbank	54_36p	-1	provisional	silent	c.312	p.H104	0.000	superfamily_SSF57850	superfamily_SSF57850,HMMSmart_RING,PatternScan_ZF_RING_1,superfamily_SSF101898,HMMPfam_NHL	-	no_errors
ENSG00000131885	0	genome.wustl.edu	36	17	18274712	18274712	+	Silent	SNP	C	T	T	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	17	18274712	18274712	C	T	SNP	ENSG00000131885	ENST00000300992	human	ensembl	54_36p	+1	known	silent	c.1077	p.C359	0.995	HMMPfam_Filament	HMMPfam_Filament,PatternScan_IF	-	no_errors
uc001wcu.2	0	genome.wustl.edu	36	14	21546053	21546053	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	14	21546053	21546053	G	A	SNP	uc001wcu.2	ENST00000390447	human	ensembl	54_36p	+1	known	missense	c.143	p.R48H	0.000	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00406	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00406	-	no_stop_codon:bad_bp_length_for_coding_region
MLLT10	8028	genome.wustl.edu	36	10	22062940	22062940	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	10	22062940	22062940	A	G	SNP	MLLT10	NM_004641	human	genbank	54_36p	+1	validated	missense	c.2782	p.I928V	1.000	NULL	superfamily_FYVE_PHD_ZnF,HMMSmart_PHD,HMMPfam_PHD,PatternScan_ZF_PHD_1	-	no_errors
GAD2	2572	genome.wustl.edu	36	10	26599587	26599587	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	10	26599587	26599587	T	G	SNP	GAD2	NM_000818	human	genbank	54_36p	+1	reviewed	missense	c.988	p.F330V	1.000	superfamily_PLP-dependent transferases,HMMPfam_Pyridoxal_deC	superfamily_PLP-dependent transferases,HMMPfam_Pyridoxal_deC,PatternScan_DDC_GAD_HDC_YDC	-	no_errors
WASF2	10163	genome.wustl.edu	36	1	27627973	27627973	+	Silent	SNP	C	C	T	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	1	27627973	27627973	C	T	SNP	WASF2	NM_006990	human	genbank	54_36p	-1	reviewed	silent	c.15	p.T5	0.998	NULL	HMMPfam_WH2,HMMSmart_WH2	-	no_errors
LOC653073	653073	genome.wustl.edu	36	15	28172724	28172724	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	15	28172724	28172724	C	G	SNP	LOC653073	XM_001724382	human	genbank	54_36p	+1	model	missense	c.1626	p.D542E	0.003	NULL	NULL	-	no_errors
LOC728888	728888	genome.wustl.edu	36	16	29302249	29302249	+	RNA	SNP	T	T	C	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	16	29302249	29302249	T	C	SNP	LOC728888	XR_015889	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.000	-	-	-	no_errors
LY6G6F	259215	genome.wustl.edu	36	6	31786341	31786341	+	Silent	SNP	C	C	T	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	6	31786341	31786341	C	T	SNP	LY6G6F	NM_001003693	human	genbank	54_36p	+1	provisional	silent	c.888	p.P296	0.933	NULL	superfamily_Immunoglobulin,HMMSmart_SM00409	-	no_errors
BAI2	576	genome.wustl.edu	36	1	31980053	31980053	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	1	31980053	31980053	G	A	SNP	BAI2	NM_001703	human	genbank	54_36p	-1	reviewed	missense	c.1520	p.T507M	0.013	superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1	superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMSmart_SM00008,HMMPfam_HRM,HMMPfam_GPS,HMMSmart_SM00303,HMMPfam_7tm_2	-	no_errors
SYNGAP1	8831	genome.wustl.edu	36	6	33519278	33519278	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	6	33519278	33519278	G	A	SNP	SYNGAP1	NM_006772	human	genbank	54_36p	+1	validated	missense	c.2926	p.G976R	0.993	NULL	HMMSmart_SM00233,superfamily_PH domain-like,HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_C2,HMMSmart_SM00323,superfamily_GTPase activation domain GAP,HMMPfam_RasGAP,PatternScan_RAS_GTPASE_ACTIV_1	-	no_errors
ARPP-21	10777	genome.wustl.edu	36	3	35760381	35760381	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	3	35760381	35760381	C	T	SNP	ARPP-21	NM_016300	human	genbank	54_36p	+1	validated	missense	c.1952	p.T651M	0.978	NULL	HMMSmart_SM00393,superfamily_R3H domain,HMMPfam_R3H	-	no_errors
KRT31	3881	genome.wustl.edu	36	17	36807153	36807153	+	Silent	SNP	G	G	A	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	17	36807153	36807153	G	A	SNP	KRT31	NM_002277	human	genbank	54_36p	-1	reviewed	silent	c.165	p.S55	0.813	HMMPfam_Filament	HMMPfam_Filament,PatternScan_IF	-	no_errors
BTBD9	114781	genome.wustl.edu	36	6	38669972	38669972	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	6	38669972	38669972	G	A	SNP	BTBD9	NM_001099272	human	genbank	54_36p	-1	validated	missense	c.295	p.R99W	1.000	superfamily_BTB/POZ_fold,HMMPfam_BTB,HMMSmart_BTB	superfamily_BTB/POZ_fold,HMMPfam_BTB,HMMSmart_BTB,HMMPfam_BACK,superfamily_Gal_bind_like,HMMPfam_F5_F8_type_C	-	no_errors
LRRK2	120892	genome.wustl.edu	36	12	39015100	39015100	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	12	39015100	39015100	G	A	SNP	LRRK2	NM_198578	human	genbank	54_36p	+1	reviewed	missense	c.5822	p.R1941H	0.931	superfamily_Kinase_like,HMMPfam_Pkinase	superfamily_ARM-type_fold,superfamily_SSF52058,HMMPfam_LRR_1,superfamily_SSF52540,HMMPfam_Miro,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ST,superfamily_WD40_like,HMMSmart_WD40,PatternScan_RCC1_2	-	no_errors
CNTN1	1272	genome.wustl.edu	36	12	39696829	39696829	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	12	39696829	39696829	A	G	SNP	CNTN1	NM_001843	human	genbank	54_36p	+1	reviewed	missense	c.2263	p.K755E	1.000	superfamily_Fibronectin type III,HMMPfam_fn3,HMMSmart_SM00060	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,HMMPfam_V-set,PatternScan_N6_MTASE,HMMPfam_I-set,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	-	no_errors
LRPPRC	10128	genome.wustl.edu	36	2	43970390	43970390	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	2	43970390	43970390	A	C	SNP	LRPPRC	NM_133259	human	genbank	54_36p	-1	reviewed	missense	c.4115	p.F1372C	1.000	NULL	superfamily_SSF48452,HMMPfam_PPR	-	no_errors
SALL4	57167	genome.wustl.edu	36	20	49841794	49841794	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	20	49841794	49841794	G	T	SNP	SALL4	NM_020436	human	genbank	54_36p	-1	reviewed	missense	c.635	p.P212Q	0.998	NULL	HMMSmart_ZnF_C2H2,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_SSF57667	-	no_errors
ZNF217	7764	genome.wustl.edu	36	20	51631423	51631423	+	Silent	SNP	G	G	A	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	20	51631423	51631423	G	A	SNP	ZNF217	NM_006526	human	genbank	54_36p	-1	validated	silent	c.1350	p.P450	0.005	NULL	HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_SSF57667	-	no_errors
PRKG1	5592	genome.wustl.edu	36	10	53710673	53710673	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	10	53710673	53710673	G	T	SNP	PRKG1	NM_006258	human	genbank	54_36p	+1	validated	missense	c.1522	p.D508Y	1.000	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase	superfamily_cAMP-binding domain-like,HMMSmart_SM00100,HMMPfam_cNMP_binding,PatternScan_CNMP_BINDING_1,PatternScan_CNMP_BINDING_2,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,HMMSmart_SM00133	-	no_errors
BMP7	655	genome.wustl.edu	36	20	55179566	55179566	+	Silent	SNP	G	G	A	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	20	55179566	55179566	G	A	SNP	BMP7	NM_001719	human	genbank	54_36p	-1	reviewed	silent	c.1152	p.H384	0.999	superfamily_Cystine-knot cytokines,HMMPfam_TGF_beta,HMMSmart_SM00204	HMMPfam_TGFb_propeptide,superfamily_Cystine-knot cytokines,HMMPfam_TGF_beta,HMMSmart_SM00204,PatternScan_TGF_BETA_1	-	no_errors
DST	667	genome.wustl.edu	36	6	56588961	56588961	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	6	56588961	56588961	C	G	SNP	DST	NM_001723	human	genbank	54_36p	-1	reviewed	missense	c.7263	p.Q2421H	0.990	superfamily_SSF75399	HMMSmart_SPEC,superfamily_Spectrin,HMMPfam_Spectrin,superfamily_SSF75399,HMMSmart_PLEC,HMMPfam_Plectin	-	no_errors
ZSCAN5B	342933	genome.wustl.edu	36	19	61393137	61393137	+	Silent	SNP	G	G	A	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	19	61393137	61393137	G	A	SNP	ZSCAN5B	NM_001080456	human	genbank	54_36p	-1	validated	silent	c.1215	p.N405	0.025	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	HMMPfam_SCAN,HMMSmart_SM00431,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
GANAB	23193	genome.wustl.edu	36	11	62157258	62157258	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	11	62157258	62157258	T	C	SNP	GANAB	NM_198335	human	genbank	54_36p	-1	validated	missense	c.758	p.K253R	1.000	NULL	HMMPfam_Glyco_hydro_31,PatternScan_GLYCOSYL_HYDROL_F31_1,PatternScan_GLYCOSYL_HYDROL_F31_2	-	no_errors
LLPH	84298	genome.wustl.edu	36	12	64809087	64809087	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	12	64809087	64809087	G	A	SNP	LLPH	NM_032338	human	genbank	54_36p	-1	validated	missense	c.67	p.P23S	1.000	HMMPfam_Laps	HMMPfam_Laps	-	no_errors
ADAM21P	0	genome.wustl.edu	36	14	69782334	69782334	+	RNA	SNP	C	C	A	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	14	69782334	69782334	C	A	SNP	ADAM21P	NR_003951	human	genbank	54_36p	-1	validated	rna	NULL	NULL	0.036	-	-	-	pseudogene
HMGCR	3156	genome.wustl.edu	36	5	74683151	74683151	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	5	74683151	74683151	G	A	SNP	HMGCR	NM_000859	human	genbank	54_36p	+1	reviewed	missense	c.1336	p.E446K	1.000	superfamily_Substrate-binding domain of HMG-CoA reductase	superfamily_Multidrug efflux transporter AcrB transmembrane domain,superfamily_Substrate-binding domain of HMG-CoA reductase,HMMPfam_HMG-CoA_red,superfamily_NAD-binding domain of HMG-CoA reductase,PatternScan_HMG_COA_REDUCTASE_1,PatternScan_HMG_COA_REDUCTASE_2,PatternScan_HMG_COA_REDUCTASE_3	-	no_errors
PI15	51050	genome.wustl.edu	36	8	75900128	75900128	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	8	75900128	75900128	C	A	SNP	PI15	NM_015886	human	genbank	54_36p	+1	reviewed	nonsense	c.89	p.S30*	0.998	NULL	PatternScan_CRISP_1,superfamily_SCP-like_extracellular,HMMSmart_SCP,HMMPfam_SCP,PatternScan_CRISP_2	-	no_errors
LRRTM4	80059	genome.wustl.edu	36	2	77599809	77599809	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	2	77599809	77599809	G	T	SNP	LRRTM4	NM_024993	human	genbank	54_36p	-1	provisional	missense	c.694	p.R232S	1.000	superfamily_SSF52058	HMMSmart_LRRNT,superfamily_SSF52058,HMMSmart_LRR_TYP,HMMPfam_LRR_1	-	no_errors
WDFY3	23001	genome.wustl.edu	36	4	85961351	85961351	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	4	85961351	85961351	T	C	SNP	WDFY3	NM_014991	human	genbank	54_36p	-1	reviewed	missense	c.1501	p.R501G	1.000	superfamily_ARM repeat	superfamily_ARM repeat,superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cyclin-like,superfamily_PH domain-like,superfamily_BEACH domain,HMMPfam_Beach,superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_WD_REPEATS_1,HMMSmart_SM00064,HMMPfam_FYVE,superfamily_FYVE/PHD zinc finger	-	no_errors
LOC344065	344065	genome.wustl.edu	36	2	95244640	95244640	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	2	95244640	95244640	C	G	SNP	LOC344065	XM_292895	human	genbank	54_36p	+1	model	missense	c.1131	p.I377M	0.000	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
LOC344065	344065	genome.wustl.edu	36	2	95244967	95244967	+	Silent	SNP	A	A	C	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	2	95244967	95244967	A	C	SNP	LOC344065	XM_292895	human	genbank	54_36p	+1	model	silent	c.1458	p.S486	0.060	HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	HMMSmart_SM00349,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
CYLC2	1539	genome.wustl.edu	36	9	104807087	104807087	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	9	104807087	104807087	G	T	SNP	CYLC2	NM_001340	human	genbank	54_36p	+1	reviewed	missense	c.353	p.G118V	0.038	NULL	NULL	-	no_errors
SYPL2	284612	genome.wustl.edu	36	1	109822189	109822189	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	1	109822189	109822189	G	C	SNP	SYPL2	ENST00000401021	human	ensembl	54_36p	+1	known	missense	c.683	p.S228T	0.000	HMMPfam_MARVEL	HMMPfam_MARVEL	-	no_errors
TPCN1	53373	genome.wustl.edu	36	12	112195764	112195764	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	12	112195764	112195764	G	A	SNP	TPCN1	NM_017901	human	genbank	54_36p	+1	validated	missense	c.850	p.D284N	1.000	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,PatternScan_LECTIN_LEGUME_BETA	-	no_errors
CSMD3	114788	genome.wustl.edu	36	8	113881611	113881611	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	8	113881611	113881611	G	C	SNP	CSMD3	NM_198123	human	genbank	54_36p	-1	validated	missense	c.1928	p.T643R	1.000	superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042	superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042,superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032,PatternScan_GLYCOSYL_HYDROL_F10	-	no_errors
KIAA1958	158405	genome.wustl.edu	36	9	114461603	114461603	+	Silent	SNP	C	C	T	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	9	114461603	114461603	C	T	SNP	KIAA1958	NM_133465	human	genbank	54_36p	+1	predicted	silent	c.1584	p.R528	1.000	NULL	NULL	-	no_errors
PCDHA13	56136	genome.wustl.edu	36	5	140242297	140242297	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	5	140242297	140242297	A	G	SNP	PCDHA13	NM_018904	human	genbank	54_36p	+1	reviewed	missense	c.260	p.N87S	1.000	superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors
MAGEA11	4110	genome.wustl.edu	36	X	148576843	148576843	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	X	148576843	148576843	T	G	SNP	MAGEA11	NM_005366	human	genbank	54_36p	-1	reviewed	missense	c.416	p.Q139P	0.001	NULL	HMMPfam_MAGE	-	no_errors
CHRNB2	1141	genome.wustl.edu	36	1	152808585	152808585	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	1	152808585	152808585	G	A	SNP	CHRNB2	NM_000748	human	genbank	54_36p	+1	reviewed	missense	c.88	p.E30K	1.000	superfamily_Nicotinic receptor ligand binding domain-like,HMMPfam_Neur_chan_LBD	superfamily_Nicotinic receptor ligand binding domain-like,HMMPfam_Neur_chan_LBD,PatternScan_NEUROTR_ION_CHANNEL,superfamily_Neurotransmitter-gated ion-channel transmembrane pore,HMMPfam_Neur_chan_memb	-	no_errors
HCN3	57657	genome.wustl.edu	36	1	153521022	153521022	+	Silent	SNP	C	C	T	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	1	153521022	153521022	C	T	SNP	HCN3	NM_020897	human	genbank	54_36p	+1	validated	silent	c.939	p.G313	1.000	superfamily_SSF81324,HMMPfam_Ion_trans	PatternScan_CNMP_BINDING_1,PatternScan_CNMP_BINDING_2,HMMPfam_Ion_trans_N,superfamily_SSF81324,HMMPfam_Ion_trans,superfamily_cNMP_binding,HMMSmart_cNMP,HMMPfam_cNMP_binding	-	no_errors
LOC152118	152118	genome.wustl.edu	36	3	154685159	154685159	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	3	154685159	154685159	C	A	SNP	LOC152118	NM_001101337	human	genbank	54_36p	+1	inferred	missense	c.124	p.L42I	0.117	NULL	NULL	-	no_errors
TLL1	7092	genome.wustl.edu	36	4	167144013	167144013	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	4	167144013	167144013	G	C	SNP	TLL1	NM_012464	human	genbank	54_36p	+1	reviewed	missense	c.653	p.R218P	1.000	"superfamily_Metalloproteases (""zincins"") catalytic domain,HMMSmart_SM00235,HMMPfam_Astacin"	"superfamily_Metalloproteases (""zincins"") catalytic domain,HMMSmart_SM00235,HMMPfam_Astacin,superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042,PatternScan_EGF_CA,HMMSmart_SM00179,superfamily_EGF/Laminin,HMMPfam_EGF_CA,HMMSmart_SM00181,PatternScan_ASX_HYDROXYL,PatternScan_EGF_2,HMMPfam_EGF"	-	no_errors
C1orf186	440712	genome.wustl.edu	36	1	204409841	204409841	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	1	204409841	204409841	G	A	SNP	C1orf186	NM_001007544	human	genbank	54_36p	-1	predicted	missense	c.44	p.A15V	0.006	NULL	NULL	-	no_errors
LOC100134324	0	genome.wustl.edu	36	X	562359	562362	+	Frame_Shift_Del	DEL	GAAA	GAAA	-	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	GAAA	GAAA					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	X	562359	562362	GAAA	-	DEL	LOC100134324	XM_001716092	human	genbank	54_36p	-1	model	frame_shift_del	c.593_590	p.L197fs	0.000:0.000:0.000:0.000	NULL	NULL	(deletion:cds_exon[562268,562433])	no_start_codon:pseudogene:no_stop_codon
LOC100134324	0	genome.wustl.edu	36	X	562404	562405	+	Frame_Shift_Ins	INS	-	-	AGAA	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	-	-					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	X	562404	562405	-	AGAA	INS	LOC100134324	XM_001716092	human	genbank	54_36p	-1	model	frame_shift_ins	c.548_547	p.S183fs	0.000:0.000	NULL	NULL	-	no_start_codon:pseudogene:no_stop_codon
ENSG00000164845	0	genome.wustl.edu	36	8	8127728	8127729	+	Frame_Shift_Del	DEL	TG	TG	-	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	TG	TG					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	8	8127728	8127729	TG	-	DEL	ENSG00000164845	ENST00000338711	human	ensembl	54_36p	+1	known	frame_shift_del	c.162_163	p.V55fs	0.940:0.941	NULL	HMMPfam_Methyltransf_16,superfamily_SSF53335	(deletion:cds_exon[8127726,8127806])	no_errors
MYO7A	4647	genome.wustl.edu	36	11	76573419	76573440	+	Frame_Shift_Del	DEL	GGAGGCGGGGACACCAGGGCCT	GGAGGCGGGGACACCAGGGCCT	-	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	GGAGGCGGGGACACCAGGGCCT	GGAGGCGGGGACACCAGGGCCT					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	11	76573419	76573440	GGAGGCGGGGACACCAGGGCCT	-	DEL	MYO7A	ENST00000409893	human	ensembl	54_36p	+1	known	frame_shift_del	c.3514_3535	p.G1172fs	0.000:0.000:0.000:0.002:0.000:0.000:0.001:0.000:0.000:0.001:0.000:0.000:0.000:0.000:0.000:0.000:0.003:0.009:0.007:0.030:0.029:0.019	NULL	superfamily_SSF52540,HMMSmart_MYSc,HMMPfam_Myosin_head,HMMSmart_IQ,HMMPfam_IQ	(deletion:cds_exon[76573281,76573442])	no_errors
SCRIB	23513	genome.wustl.edu	36	8	144963053	144963054	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-29-1701-01A-01W-0633-09	TCGA-29-1701-10A-01W-0633-09	-	-					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	674bb2d4-609a-487b-adc8-30d3584ced80	24e7f03f-2fdc-45d4-bf6e-fbf102e83fc7	8	144963053	144963054	-	A	INS	SCRIB	NM_182706	human	genbank	54_36p	-1	validated	frame_shift_ins	c.1829_1828	p.Y610fs	1.000:1.000	NULL	superfamily_RNI-like,HMMSmart_SM00364,HMMPfam_LRR_1,HMMSmart_SM00369,superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228	-	no_errors
