Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error
LOC100133120	0	genome.wustl.edu	36	7	57375	57375	+	RNA	SNP	G	A	A	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	7	57375	57375	G	A	SNP	LOC100133120	XR_037156	human	genbank	54_36p	+1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
PXDN	7837	genome.wustl.edu	36	2	1649241	1649241	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	2	1649241	1649241	G	C	SNP	PXDN	NM_012293	human	genbank	54_36p	-1	validated	missense	c.1043	p.P348R	0.999	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409	superfamily_L domain-like,HMMSmart_SM00369,HMMPfam_LRR_1,HMMSmart_SM00082,HMMPfam_LRRCT,superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,superfamily_Heme-dependent peroxidases,HMMPfam_An_peroxidase,HMMPfam_VWC,HMMSmart_SM00214,PatternScan_VWFC_1	-	no_errors
ARRB2	409	genome.wustl.edu	36	17	4570442	4570442	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	17	4570442	4570442	T	C	SNP	ARRB2	NM_004313	human	genbank	54_36p	+1	reviewed	missense	c.1007	p.V336A	1.000	superfamily_E set domains,HMMPfam_Arrestin_C	superfamily_E set domains,HMMPfam_Arrestin_N,PatternScan_ARRESTINS,HMMPfam_Arrestin_C	-	no_errors
APITD1	378708	genome.wustl.edu	36	1	10416543	10416543	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	1	10416543	10416543	G	C	SNP	APITD1	NM_198544	human	genbank	54_36p	+1	reviewed	missense	c.109	p.D37H	0.969	superfamily_Histone-fold	superfamily_Histone-fold,HMMPfam_Somatostatin	-	no_errors
PRB2	653247	genome.wustl.edu	36	12	11437548	11437548	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	12	11437548	11437548	C	T	SNP	PRB2	NM_006248	human	genbank	54_36p	-1	validated	missense	c.668	p.G223E	0.002	NULL	NULL	-	no_errors
VPS13D	55187	genome.wustl.edu	36	1	12331893	12331893	+	Silent	SNP	C	C	G	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	1	12331893	12331893	C	G	SNP	VPS13D	NM_015378	human	genbank	54_36p	+1	reviewed	silent	c.9306	p.P3102	0.986	NULL	superfamily_UBA-like,HMMPfam_UBA,HMMSmart_SM00165,HMMPfam_DUF1162	-	no_errors
TRPV2	51393	genome.wustl.edu	36	17	16277647	16277647	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	17	16277647	16277647	A	T	SNP	TRPV2	NM_016113	human	genbank	54_36p	+1	reviewed	missense	c.2024	p.Y675F	0.617	NULL	superfamily_ANK,HMMPfam_Ank,HMMSmart_ANK,HMMPfam_Ion_trans	-	no_errors
SLC7A2	6542	genome.wustl.edu	36	8	17446455	17446455	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	8	17446455	17446455	G	T	SNP	SLC7A2	NM_003046	human	genbank	54_36p	+1	validated	missense	c.616	p.D206Y	0.998	NULL	HMMPfam_AA_permease	-	no_errors
VSIG7	390531	genome.wustl.edu	36	15	18430004	18430004	+	Silent	SNP	G	G	A	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	15	18430004	18430004	G	A	SNP	VSIG7	ENST00000338912	human	ensembl	54_36p	-1	known	silent	c.282	p.S94	0.424	HMMPfam_V-set,superfamily_SSF48726,HMMSmart_IGv	HMMPfam_V-set,superfamily_SSF48726,HMMSmart_IGv	-	no_errors
UEVLD	55293	genome.wustl.edu	36	11	18543105	18543105	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	11	18543105	18543105	C	G	SNP	UEVLD	NM_001040697	human	genbank	54_36p	-1	validated	missense	c.522	p.W174C	0.971	superfamily_NAD(P)-binding Rossmann-fold domains	superfamily_UBC-like,HMMPfam_UEV,superfamily_NAD(P)-binding Rossmann-fold domains,HMMPfam_Ldh_1_N,superfamily_LDH C-terminal domain-like,HMMPfam_Ldh_1_C	-	no_errors
RIN2	54453	genome.wustl.edu	36	20	19904238	19904238	+	Silent	SNP	G	G	A	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	20	19904238	19904238	G	A	SNP	RIN2	NM_018993	human	genbank	54_36p	+1	reviewed	silent	c.1569	p.R523	1.000	NULL	superfamily_SH2 domain,superfamily_VPS9 domain (Pfam 02204),HMMSmart_SM00167,HMMPfam_VPS9,HMMPfam_RA,HMMSmart_SM00314	-	no_errors
DNAH11	8701	genome.wustl.edu	36	7	21606197	21606197	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	7	21606197	21606197	A	G	SNP	DNAH11	ENST00000328843	human	ensembl	54_36p	+1	known	missense	c.2935	p.N979D	0.000	NULL	HMMPfam_DHC_N1,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,PatternScan_THIOL_PROTEASE_HIS,HMMPfam_AAA_5,PatternScan_WD_REPEATS_1,HMMPfam_Dynein_heavy	-	no_errors
CDCA7L	55536	genome.wustl.edu	36	7	21908390	21908390	+	Splice_Site	SNP	T	T	A	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	7	21908390	21908390	T	A	SNP	CDCA7L	ENST00000373934	human	ensembl	54_36p	-1	known	splice_site	c.1365+1	e10+1	0.003	-	-	-	no_errors
TNRC6A	27327	genome.wustl.edu	36	16	24725471	24725471	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	16	24725471	24725471	C	T	SNP	TNRC6A	NM_014494	human	genbank	54_36p	+1	reviewed	nonsense	c.4405	p.Q1469*	1.000	NULL	PatternScan_TUBULIN_B_AUTOREG,HMMPfam_Ago_hook,superfamily_RNA-binding domain RBD	-	no_errors
SLC30A2	7780	genome.wustl.edu	36	1	26240846	26240846	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	1	26240846	26240846	A	C	SNP	SLC30A2	NM_001004434	human	genbank	54_36p	-1	validated	missense	c.770	p.V257G	1.000	HMMPfam_Cation_efflux	HMMPfam_Cation_efflux	-	no_errors
ASXL3	80816	genome.wustl.edu	36	18	29480238	29480238	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	18	29480238	29480238	C	T	SNP	ASXL3	NM_030632	human	genbank	54_36p	+1	validated	missense	c.278	p.T93M	0.996	NULL	NULL	-	no_errors
ROMO1	140823	genome.wustl.edu	36	20	33751081	33751081	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	20	33751081	33751081	G	C	SNP	ROMO1	NM_080748	human	genbank	54_36p	+1	validated	missense	c.113	p.G38A	1.000	HMMPfam_Mit_gmP	HMMPfam_Mit_gmP	-	no_errors
KCNK17	89822	genome.wustl.edu	36	6	39386734	39386734	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	6	39386734	39386734	C	T	SNP	KCNK17	NM_031460	human	genbank	54_36p	-1	reviewed	missense	c.265	p.A89T	0.000	superfamily_SSF81324,HMMPfam_Ion_trans_2	superfamily_SSF81324,HMMPfam_Ion_trans_2	-	no_errors
SETBP1	26040	genome.wustl.edu	36	18	40897137	40897137	+	Missense_Mutation	SNP	A	T	T	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	18	40897137	40897137	A	T	SNP	SETBP1	NM_015559	human	genbank	54_36p	+1	validated	missense	c.4105	p.T1369S	1.000	NULL	HMMPfam_AT_hook,HMMSmart_AT_hook	-	no_errors
FOXP4	116113	genome.wustl.edu	36	6	41641602	41641602	+	Silent	SNP	G	G	C	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	6	41641602	41641602	G	C	SNP	FOXP4	NM_001012426	human	genbank	54_36p	+1	reviewed	silent	c.126	p.T42	0.238	NULL	"PatternScan_ZINC_FINGER_C2H2_1,HMMSmart_SM00339,superfamily_""Winged helix"" DNA-binding domain,HMMPfam_Fork_head,PatternScan_FORK_HEAD_2"	-	no_errors
B4GALNT2	124872	genome.wustl.edu	36	17	44601997	44601997	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	17	44601997	44601997	A	T	SNP	B4GALNT2	NM_153446	human	genbank	54_36p	+1	provisional	missense	c.1609	p.T537S	0.492	NULL	superfamily_Nucleotide-diphospho-sugar transferases,HMMPfam_Glycos_transf_2	-	no_errors
OGDH	4967	genome.wustl.edu	36	7	44703122	44703122	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	7	44703122	44703122	G	A	SNP	OGDH	NM_002541	human	genbank	54_36p	+1	reviewed	missense	c.1985	p.G662D	1.000	superfamily_SSF52518,HMMPfam_Transket_pyr	superfamily_SSF52518,HMMPfam_E1_dh,HMMPfam_Transket_pyr	-	no_errors
GPBP1L1	60313	genome.wustl.edu	36	1	45868799	45868799	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	1	45868799	45868799	C	T	SNP	GPBP1L1	NM_021639	human	genbank	54_36p	-1	validated	missense	c.1111	p.A371T	0.969	NULL	NULL	-	no_errors
PIGF	5281	genome.wustl.edu	36	2	46692894	46692894	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	2	46692894	46692894	C	T	SNP	PIGF	NM_002643	human	genbank	54_36p	-1	reviewed	nonsense	c.414	p.W138*	1.000	HMMPfam_PIG-F	HMMPfam_PIG-F	-	no_errors
SCN8A	6334	genome.wustl.edu	36	12	50379731	50379731	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	12	50379731	50379731	T	C	SNP	SCN8A	NM_014191	human	genbank	54_36p	+1	validated	missense	c.817	p.F273L	1.000	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc,PatternScan_ODR_DC_2_1,HMMSmart_SM00015,HMMPfam_IQ	-	no_errors
LOC343184	343184	genome.wustl.edu	36	1	50564569	50564569	+	RNA	SNP	G	G	T	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	1	50564569	50564569	G	T	SNP	LOC343184	XR_016832	human	genbank	54_36p	+1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
FAM120C	54954	genome.wustl.edu	36	X	54178044	54178044	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	X	54178044	54178044	C	G	SNP	FAM120C	NM_017848	human	genbank	54_36p	-1	validated	missense	c.1561	p.D521H	0.999	NULL	NULL	-	no_errors
CD37	951	genome.wustl.edu	36	19	54530833	54530833	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	19	54530833	54530833	G	C	SNP	CD37	NM_001774	human	genbank	54_36p	+1	reviewed	missense	c.120	p.K40N	1.000	HMMPfam_Tetraspannin	HMMPfam_Tetraspannin,PatternScan_TM4_1,superfamily_Tetraspanin	-	no_errors
TCEA1	6917	genome.wustl.edu	36	8	55085586	55085586	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	8	55085586	55085586	A	T	SNP	TCEA1	NM_006756	human	genbank	54_36p	-1	validated	missense	c.83	p.L28Q	1.000	superfamily_Conserved domain common to transcription factors TFIIS elongin A CRSP70,HMMPfam_TFIIS,HMMSmart_SM00509	superfamily_Conserved domain common to transcription factors TFIIS elongin A CRSP70,HMMPfam_TFIIS,HMMSmart_SM00509,superfamily_Elongation factor TFIIS domain 2,HMMPfam_TFIIS_M,HMMSmart_SM00510,superfamily_Zinc beta-ribbon,HMMPfam_TFIIS_C,HMMSmart_SM00440,PatternScan_ZF_TFIIS_1	-	no_errors
OR4C16	219428	genome.wustl.edu	36	11	55096538	55096538	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	11	55096538	55096538	G	A	SNP	OR4C16	NM_001004701	human	genbank	54_36p	+1	validated	missense	c.359	p.R120H	1.000	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
ZNF473	25888	genome.wustl.edu	36	19	55239975	55239975	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	19	55239975	55239975	G	C	SNP	ZNF473	NM_001006656	human	genbank	54_36p	+1	validated	missense	c.463	p.G155R	0.001	NULL	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
MYBPC2	4606	genome.wustl.edu	36	19	55631693	55631693	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	19	55631693	55631693	C	A	SNP	MYBPC2	NM_004533	human	genbank	54_36p	+1	validated	missense	c.353	p.T118N	0.999	superfamily_SSF48726,HMMSmart_IG	superfamily_SSF48726,HMMSmart_IG,HMMPfam_I-set,superfamily_FN_III-like,HMMSmart_FN3,HMMPfam_fn3,HMMSmart_IGc2	-	no_errors
ERC2	26059	genome.wustl.edu	36	3	55708477	55708477	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	3	55708477	55708477	T	G	SNP	ERC2	NM_015576	human	genbank	54_36p	-1	validated	missense	c.2816	p.Q939P	0.998	NULL	HMMPfam_Cast,superfamily_Prefoldin	-	no_errors
NLRP7	199713	genome.wustl.edu	36	19	60136885	60136885	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	19	60136885	60136885	T	C	SNP	NLRP7	NM_139176	human	genbank	54_36p	-1	reviewed	missense	c.2422	p.K808E	0.003	superfamily_SSF52047	superfamily_DEATH_like,HMMPfam_PAAD_DAPIN,superfamily_SSF52540,HMMPfam_NACHT,superfamily_SSF52047	-	no_errors
HSF4	3299	genome.wustl.edu	36	16	65758533	65758533	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	16	65758533	65758533	G	T	SNP	HSF4	NM_001040667	human	genbank	54_36p	+1	reviewed	missense	c.636	p.M212I	1.000	NULL	"superfamily_""Winged helix"" DNA-binding domain,HMMSmart_SM00415,HMMPfam_HSF_DNA-bind,PatternScan_HSF_DOMAIN"	-	no_errors
LEPR	3953	genome.wustl.edu	36	1	65874502	65874502	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	1	65874502	65874502	C	G	SNP	LEPR	NM_002303	human	genbank	54_36p	+1	validated	nonsense	c.2714	p.S905*	0.848	NULL	superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,PatternScan_HEMATOPO_REC_S_F1,HMMPfam_Lep_receptor_Ig,PatternScan_HEMATOPO_REC_L_F2	-	no_errors
LOC441442	0	genome.wustl.edu	36	9	67847653	67847653	+	RNA	SNP	C	C	T	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	9	67847653	67847653	C	T	SNP	LOC441442	XR_037084	human	genbank	54_36p	-1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
TPCN2	219931	genome.wustl.edu	36	11	68578837	68578837	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	11	68578837	68578837	C	T	SNP	TPCN2	NM_139075	human	genbank	54_36p	+1	validated	nonsense	c.247	p.Q83*	1.000	superfamily_SSF81324	superfamily_SSF81324,HMMPfam_Ion_trans	-	no_errors
STOX1	219736	genome.wustl.edu	36	10	70315169	70315169	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	10	70315169	70315169	G	T	SNP	STOX1	NM_152709	human	genbank	54_36p	+1	provisional	missense	c.1611	p.L537F	0.993	NULL	HMMPfam_Stork_head	-	no_errors
RPS3	6188	genome.wustl.edu	36	11	74789474	74789474	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	11	74789474	74789474	G	A	SNP	RPS3	NM_001005	human	genbank	54_36p	+1	reviewed	missense	c.119	p.R40Q	1.000	superfamily_Prokaryotic type KH domain (KH-domain type II)	superfamily_Prokaryotic type KH domain (KH-domain type II),HMMPfam_KH_2,superfamily_Ribosomal protein S3 C-terminal domain,HMMPfam_Ribosomal_S3_C,PatternScan_RIBOSOMAL_S3	-	no_errors
ADAMTS18	170692	genome.wustl.edu	36	16	76022993	76022993	+	Silent	SNP	C	C	A	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	16	76022993	76022993	C	A	SNP	ADAMTS18	NM_199355	human	genbank	54_36p	-1	reviewed	silent	c.195	p.T65	0.995	HMMPfam_Pep_M12B_propep	"HMMPfam_Pep_M12B_propep,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Reprolysin,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMPfam_ADAM_spacer1,HMMPfam_PLAC"	-	no_errors
KIF27	55582	genome.wustl.edu	36	9	85691866	85691866	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	9	85691866	85691866	G	A	SNP	KIF27	NM_017576	human	genbank	54_36p	-1	provisional	missense	c.2149	p.R717C	0.432	NULL	HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Kinesin,PatternScan_KINESIN_MOTOR_DOMAIN1	-	no_errors
CLCA4	22802	genome.wustl.edu	36	1	86818581	86818581	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	1	86818581	86818581	G	C	SNP	CLCA4	NM_012128	human	genbank	54_36p	+1	reviewed	missense	c.2725	p.V909L	0.006	NULL	HMMPfam_CLCA_N,superfamily_SSF53300,HMMSmart_VWA,HMMPfam_VWA,HMMPfam_DUF1973	-	no_errors
FAM35A	54537	genome.wustl.edu	36	10	88902041	88902041	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	10	88902041	88902041	G	T	SNP	FAM35A	NM_019054	human	genbank	54_36p	+1	validated	missense	c.950	p.C317F	0.155	NULL	NULL	-	no_errors
GPR83	10888	genome.wustl.edu	36	11	93774044	93774044	+	Silent	SNP	C	C	T	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	11	93774044	93774044	C	T	SNP	GPR83	NM_016540	human	genbank	54_36p	-1	validated	silent	c.18	p.L6	0.568	NULL	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
RAP2A	5911	genome.wustl.edu	36	13	96884900	96884900	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	13	96884900	96884900	G	C	SNP	RAP2A	NM_021033	human	genbank	54_36p	+1	validated	missense	c.175	p.A59P	1.000	HMMSmart_SM00173,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00175,HMMPfam_Ras,HMMSmart_SM00174,HMMSmart_SM00176	HMMSmart_SM00173,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00175,HMMPfam_Ras,HMMSmart_SM00174,HMMSmart_SM00176	-	no_errors
MTERFD1	51001	genome.wustl.edu	36	8	97320931	97320931	+	Silent	SNP	T	T	C	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	8	97320931	97320931	T	C	SNP	MTERFD1	NM_015942	human	genbank	54_36p	-1	provisional	silent	c.1218	p.S406	0.715	NULL	HMMPfam_mTERF,HMMSmart_SM00733	-	no_errors
TMEM131	23505	genome.wustl.edu	36	2	97792648	97792648	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	2	97792648	97792648	C	A	SNP	TMEM131	NM_015348	human	genbank	54_36p	-1	validated	missense	c.1990	p.A664S	1.000	NULL	NULL	-	no_errors
HABP4	22927	genome.wustl.edu	36	9	98267509	98267509	+	Silent	SNP	C	C	G	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	9	98267509	98267509	C	G	SNP	HABP4	NM_014282	human	genbank	54_36p	+1	validated	silent	c.582	p.G194	0.998	NULL	HMMPfam_HABP4_PAI-RBP1	-	no_errors
OR5K3	403277	genome.wustl.edu	36	3	99593117	99593117	+	Silent	SNP	A	A	G	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	3	99593117	99593117	A	G	SNP	OR5K3	NM_001005516	human	genbank	54_36p	+1	provisional	silent	c.918	p.R306	0.000	superfamily_SSF81321	PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321,HMMPfam_7tm_1	-	no_errors
MEPCE	56257	genome.wustl.edu	36	7	99866085	99866085	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	7	99866085	99866085	C	T	SNP	MEPCE	NM_019606	human	genbank	54_36p	+1	provisional	missense	c.508	p.R170C	1.000	NULL	superfamily_SSF53335,HMMPfam_Bin3	-	no_errors
UTP20	27340	genome.wustl.edu	36	12	100247327	100247327	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	12	100247327	100247327	C	A	SNP	UTP20	NM_014503	human	genbank	54_36p	+1	validated	missense	c.3386	p.T1129N	0.086	superfamily_ARM repeat	superfamily_ARM repeat,HMMPfam_DRIM	-	no_errors
NPAS2	4862	genome.wustl.edu	36	2	100971140	100971140	+	Silent	SNP	G	G	A	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	2	100971140	100971140	G	A	SNP	NPAS2	NM_002518	human	genbank	54_36p	+1	reviewed	silent	c.1797	p.L599	0.994	NULL	superfamily_HLH_basic,HMMPfam_HLH,HMMSmart_HLH,HMMSmart_PAS,HMMPfam_PAS,superfamily_SSF55785,HMMPfam_PAS_3,HMMSmart_PAC	-	no_errors
RELN	5649	genome.wustl.edu	36	7	102947061	102947061	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	7	102947061	102947061	C	A	SNP	RELN	NM_005045	human	genbank	54_36p	-1	reviewed	missense	c.7807	p.G2603C	1.000	superfamily_Sialidase	HMMPfam_Reeler,superfamily_SSF57196,HMMSmart_EGF,HMMPfam_EGF_2,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Sialidase	-	no_errors
SORCS3	22986	genome.wustl.edu	36	10	106592551	106592551	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	10	106592551	106592551	C	G	SNP	SORCS3	NM_014978	human	genbank	54_36p	+1	reviewed	missense	c.639	p.I213M	1.000	superfamily_SSF110296	superfamily_SSF110296,HMMSmart_VPS10,HMMPfam_PKD,superfamily_PKD	-	no_errors
FRMPD3	84443	genome.wustl.edu	36	X	106731534	106731534	+	Silent	SNP	C	A	A	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	X	106731534	106731534	C	A	SNP	FRMPD3	XM_042978	human	genbank	54_36p	+1	model	silent	c.3708	p.G1236	0.350	NULL	PatternScan_FERM_1,PatternScan_FERM_2,superfamily_PDZ,HMMPfam_PDZ,HMMSmart_PDZ,HMMSmart_B41,superfamily_FERM_3-hlx,HMMPfam_FERM_M	-	no_errors
ACACB	32	genome.wustl.edu	36	12	108145087	108145087	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	12	108145087	108145087	C	G	SNP	ACACB	NM_001093	human	genbank	54_36p	+1	reviewed	missense	c.3779	p.P1260R	1.000	HMMPfam_ACC_central	HMMPfam_CPSase_L_chain,superfamily_PreATP-grasp domain,superfamily_Glutathione synthetase ATP-binding domain-like,HMMPfam_CPSase_L_D2,PatternScan_CPSASE_1,PatternScan_CPSASE_2,superfamily_Rudiment single hybrid motif,HMMPfam_Biotin_carb_C,superfamily_Single hybrid motif,HMMPfam_Biotin_lipoyl,HMMPfam_ACC_central,superfamily_ClpP/crotonase,HMMPfam_Carboxyl_trans	-	no_errors
PROZ	8858	genome.wustl.edu	36	13	112862409	112862409	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	13	112862409	112862409	G	A	SNP	PROZ	NM_003891	human	genbank	54_36p	+1	provisional	missense	c.151	p.E51K	0.045	HMMSmart_SM00069,superfamily_GLA-domain,HMMPfam_Gla	HMMSmart_SM00069,superfamily_GLA-domain,HMMPfam_Gla,PatternScan_GLA_1,HMMSmart_SM00181,HMMPfam_EGF,HMMSmart_SM00179,PatternScan_ASX_HYDROXYL,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_EGF/Laminin,superfamily_Trypsin-like serine proteases,HMMSmart_SM00020,HMMPfam_Trypsin	-	no_errors
SIDT1	54847	genome.wustl.edu	36	3	114812558	114812558	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	3	114812558	114812558	G	C	SNP	SIDT1	NM_017699	human	genbank	54_36p	+1	validated	missense	c.1734	p.M578I	1.000	NULL	NULL	-	no_errors
RAD21	5885	genome.wustl.edu	36	8	117938780	117938780	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	8	117938780	117938780	T	C	SNP	RAD21	NM_006265	human	genbank	54_36p	-1	reviewed	missense	c.595	p.T199A	1.000	NULL	HMMPfam_Rad21_Rec8_N,HMMPfam_Rad21_Rec8	-	no_errors
TRIM32	22954	genome.wustl.edu	36	9	118500556	118500556	+	Silent	SNP	C	C	T	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	9	118500556	118500556	C	T	SNP	TRIM32	NM_001099679	human	genbank	54_36p	+1	reviewed	silent	c.714	p.R238	1.000	NULL	superfamily_SSF57850,HMMSmart_RING,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1,HMMSmart_BBOX,superfamily_SSF101898,HMMPfam_NHL	-	no_errors
CDGAP	57514	genome.wustl.edu	36	3	120616674	120616674	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	3	120616674	120616674	G	A	SNP	CDGAP	NM_020754	human	genbank	54_36p	+1	reviewed	missense	c.3208	p.E1070K	0.006	NULL	superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP	-	no_errors
GOLGB1	2804	genome.wustl.edu	36	3	122896823	122896823	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	3	122896823	122896823	T	A	SNP	GOLGB1	NM_004487	human	genbank	54_36p	-1	validated	missense	c.5222	p.K1741M	0.094	HMMSmart_SM00340	superfamily_Spectrin repeat,superfamily_Prefoldin,HMMSmart_SM00340	-	no_errors
PARP14	54625	genome.wustl.edu	36	3	123900965	123900965	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	3	123900965	123900965	A	G	SNP	PARP14	NM_017554	human	genbank	54_36p	+1	validated	missense	c.874	p.K292E	0.000	NULL	superfamily_Macro domain-like,HMMSmart_SM00506,HMMPfam_Macro,superfamily_ADP-ribosylation,HMMPfam_PARP	-	no_errors
C9orf119	375757	genome.wustl.edu	36	9	130088106	130088106	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	9	130088106	130088106	G	A	SNP	C9orf119	NM_001040011	human	genbank	54_36p	+1	validated	missense	c.616	p.V206M	0.280	HMMPfam_Swi5	HMMPfam_Swi5	-	no_errors
AKAP7	9465	genome.wustl.edu	36	6	131644499	131644499	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	6	131644499	131644499	C	G	SNP	AKAP7	NM_016377	human	genbank	54_36p	+1	reviewed	missense	c.921	p.S307R	0.961	HMMPfam_AKAP7_RIRII_bdg	HMMPfam_AKAP7_NLS,superfamily_LigT-like,HMMPfam_AKAP7_RIRII_bdg	-	no_errors
BCLAF1	9774	genome.wustl.edu	36	6	136638831	136638831	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	6	136638831	136638831	A	G	SNP	BCLAF1	NM_014739	human	genbank	54_36p	-1	reviewed	missense	c.1525	p.F509L	1.000	NULL	NULL	-	no_errors
CLCN1	1180	genome.wustl.edu	36	7	142740031	142740031	+	Silent	SNP	G	G	A	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	7	142740031	142740031	G	A	SNP	CLCN1	NM_000083	human	genbank	54_36p	+1	reviewed	silent	c.1344	p.V448	0.995	superfamily_Clc chloride channel,HMMPfam_Voltage_CLC	superfamily_Clc chloride channel,HMMPfam_Voltage_CLC,superfamily_CBS-domain,HMMPfam_CBS	-	no_errors
FBXO38	81545	genome.wustl.edu	36	5	147766049	147766049	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	5	147766049	147766049	C	A	SNP	FBXO38	NM_205836	human	genbank	54_36p	+1	validated	missense	c.767	p.T256K	1.000	superfamily_RNI-like	superfamily_F-box domain,HMMPfam_F-box,superfamily_RNI-like	-	no_errors
CUL1	8454	genome.wustl.edu	36	7	148115035	148115035	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	7	148115035	148115035	G	C	SNP	CUL1	NM_003592	human	genbank	54_36p	+1	validated	missense	c.1369	p.E457Q	1.000	HMMPfam_Cullin,superfamily_Cullin homology domain,HMMSmart_SM00182	"superfamily_Cullin repeat,HMMPfam_Cullin,superfamily_Cullin homology domain,HMMSmart_SM00182,superfamily_""Winged helix"" DNA-binding domain,HMMPfam_Cullin_Nedd8,PatternScan_CULLIN_1"	-	no_errors
SLC36A3	285641	genome.wustl.edu	36	5	150640908	150640908	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	5	150640908	150640908	G	A	SNP	SLC36A3	NM_181774	human	genbank	54_36p	-1	validated	missense	c.1004	p.S335F	0.986	HMMPfam_Aa_trans	HMMPfam_Aa_trans	-	no_errors
TTC21B	79809	genome.wustl.edu	36	2	166505834	166505834	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	2	166505834	166505834	T	G	SNP	TTC21B	NM_024753	human	genbank	54_36p	-1	validated	missense	c.659	p.K220T	1.000	superfamily_TPR-like	superfamily_TPR-like,HMMPfam_TPR_1,HMMSmart_SM00028	-	no_errors
TBP	6908	genome.wustl.edu	36	6	170712977	170712977	+	Silent	SNP	G	G	A	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	6	170712977	170712977	G	A	SNP	TBP	NM_003194	human	genbank	54_36p	+1	reviewed	silent	c.228	p.Q76	0.973	NULL	superfamily_TFIID_C/glycos_N,HMMPfam_TBP,PatternScan_TFIID	-	no_errors
GPR155	151556	genome.wustl.edu	36	2	175032872	175032872	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	2	175032872	175032872	G	A	SNP	GPR155	NM_001033045	human	genbank	54_36p	-1	validated	missense	c.1751	p.T584I	0.774	NULL	"HMMPfam_Mem_trans,superfamily_""Winged helix"" DNA-binding domain,HMMSmart_SM00049,HMMPfam_DEP"	-	no_errors
ABL2	27	genome.wustl.edu	36	1	177343584	177343584	+	Silent	SNP	C	C	T	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	1	177343584	177343584	C	T	SNP	ABL2	NM_007314	human	genbank	54_36p	-1	reviewed	silent	c.3441	p.L1147	1.000	HMMPfam_F_actin_bind,HMMSmart_SM00808	superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_F_actin_bind,HMMSmart_SM00808	-	no_errors
PTGS2	5743	genome.wustl.edu	36	1	184910246	184910246	+	Silent	SNP	C	C	T	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	1	184910246	184910246	C	T	SNP	PTGS2	NM_000963	human	genbank	54_36p	-1	reviewed	silent	c.1677	p.K559	0.992	superfamily_Heme-dependent peroxidases,HMMPfam_An_peroxidase	superfamily_EGF/Laminin,HMMPfam_EGF,superfamily_Heme-dependent peroxidases,HMMPfam_An_peroxidase	-	no_errors
PAK2	5062	genome.wustl.edu	36	3	198014339	198014339	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	3	198014339	198014339	G	C	SNP	PAK2	NM_002577	human	genbank	54_36p	+1	reviewed	missense	c.343	p.E115Q	1.000	HMMPfam_PBD	HMMPfam_PBD,HMMSmart_PBD,superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors
CACNA1S	779	genome.wustl.edu	36	1	199277310	199277310	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	1	199277310	199277310	C	G	SNP	CACNA1S	NM_000069	human	genbank	54_36p	-1	reviewed	missense	c.5079	p.E1693D	0.007	NULL	superfamily_SSF81324,HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ	-	no_errors
MAP2	4133	genome.wustl.edu	36	2	210266936	210266936	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	2	210266936	210266936	A	C	SNP	MAP2	NM_002374	human	genbank	54_36p	+1	reviewed	missense	c.1797	p.R599S	1.000	HMMPfam_MAP2_projctn	HMMPfam_RII_binding_1,HMMPfam_MAP2_projctn,HMMPfam_Tubulin-binding,PatternScan_TAU_MAP	-	no_errors
RYR2	6262	genome.wustl.edu	36	1	236017968	236017968	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-29-1769-01A-01W-0639-09	TCGA-29-1769-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	6e3821b5-a446-4b2d-9ede-6be24af88e5e	093609c2-c2b8-41d0-85ac-c69048b9b06b	1	236017968	236017968	G	C	SNP	RYR2	NM_001035	human	genbank	54_36p	+1	reviewed	missense	c.13386	p.L4462F	0.151	HMMPfam_RR_TM4-6	HMMPfam_Ins145_P3_rec,HMMSmart_SM00472,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMPfam_RYDR_ITPR,HMMPfam_SPRY,HMMSmart_SM00449,HMMPfam_RyR,HMMPfam_RIH_assoc,superfamily_EF-hand,HMMPfam_RR_TM4-6,HMMPfam_Ion_trans	-	no_errors
