Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error
MT-CYB	4519	genome.wustl.edu	36	MT	14881	14881	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	MT	14881	14881	T	C	SNP	MT-CYB	ENST00000361789	human	ensembl	54_36p	+1	known	missense	c.134	p.I45T	NULL	superfamily_Transmembr_di-haem_cytochrome,HMMPfam_Cytochrom_B_N	superfamily_Transmembr_di-haem_cytochrome,HMMPfam_Cytochrom_B_N,HMMPfam_Cytochrom_B_C,superfamily_Cytochrome_b/b6_C	-	no_stop_codon:bad_bp_length_for_coding_region
ZNF343	79175	genome.wustl.edu	36	20	2412454	2412454	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	20	2412454	2412454	C	G	SNP	ZNF343	NM_024325	human	genbank	54_36p	-1	validated	missense	c.1153	p.E385Q	0.000	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
SDK1	221935	genome.wustl.edu	36	7	4243940	4243940	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	7	4243940	4243940	C	A	SNP	SDK1	NM_152744	human	genbank	54_36p	+1	validated	missense	c.6128	p.T2043K	0.984	NULL	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,HMMPfam_I-set,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	-	no_errors
FLJ46481	389197	genome.wustl.edu	36	4	6012054	6012054	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	4	6012054	6012054	G	C	SNP	FLJ46481	NM_207405	human	genbank	54_36p	-1	predicted	missense	c.780	p.S260R	0.027	NULL	NULL	-	no_errors
TP53	7157	genome.wustl.edu	36	17	7519131	7519131	+	Missense_Mutation	SNP	C	T	T	rs28934578	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	17	7519131	7519131	C	T	SNP	TP53	NM_000546	human	genbank	54_36p	-1	reviewed	missense	c.524	p.R175H	1.000	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors
CC2D2A	57545	genome.wustl.edu	36	4	15127381	15127381	+	Silent	SNP	A	A	T	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	4	15127381	15127381	A	T	SNP	CC2D2A	NM_001080522	human	genbank	54_36p	+1	validated	silent	c.1053	p.L351	0.956	NULL	HMMSmart_C2	-	no_errors
CC2D2A	57545	genome.wustl.edu	36	4	15148811	15148811	+	Silent	SNP	G	G	A	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	4	15148811	15148811	G	A	SNP	CC2D2A	NM_001080522	human	genbank	54_36p	+1	validated	silent	c.1956	p.P652	0.873	NULL	HMMSmart_C2	-	no_errors
CECR1	51816	genome.wustl.edu	36	22	16064629	16064629	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	22	16064629	16064629	G	A	SNP	CECR1	NM_017424	human	genbank	54_36p	-1	reviewed	missense	c.577	p.P193S	1.000	superfamily_SSF51556,HMMPfam_A_deaminase	HMMPfam_A_deaminase_N,superfamily_SSF51556,HMMPfam_A_deaminase	-	no_errors
KIF13A	63971	genome.wustl.edu	36	6	17902872	17902872	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	6	17902872	17902872	T	C	SNP	KIF13A	NM_022113	human	genbank	54_36p	-1	validated	missense	c.2985	p.I995M	0.004	NULL	HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Kinesin,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_SMAD/FHA domain,HMMPfam_FHA	-	no_errors
NAV2	89797	genome.wustl.edu	36	11	19926887	19926887	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	11	19926887	19926887	G	A	SNP	NAV2	NM_182964	human	genbank	54_36p	+1	validated	missense	c.2399	p.R800K	0.978	NULL	superfamily_Calponin-homology domain CH-domain,HMMSmart_SM00033,HMMPfam_CH,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382	-	no_errors
APOB	338	genome.wustl.edu	36	2	21079293	21079293	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	2	21079293	21079293	T	A	SNP	APOB	NM_000384	human	genbank	54_36p	-1	reviewed	missense	c.12506	p.D4169V	0.000	NULL	superfamily_Lipovitellin-phosvitin complex beta-sheet shell regions,HMMPfam_Vitellogenin_N,HMMSmart_SM00638,superfamily_Lipovitellin-phosvitin complex superhelical domain,HMMPfam_DUF1943,HMMPfam_DUF1081	-	no_errors
C17orf42	79736	genome.wustl.edu	36	17	26255213	26255213	+	Silent	SNP	A	C	C	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	17	26255213	26255213	A	C	SNP	C17orf42	NM_024683	human	genbank	54_36p	-1	validated	silent	c.492	p.L164	0.994	NULL	superfamily_Ribonuclease H-like	-	no_errors
MYO3A	53904	genome.wustl.edu	36	10	26503232	26503232	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	10	26503232	26503232	G	A	SNP	MYO3A	NM_017433	human	genbank	54_36p	+1	reviewed	missense	c.4033	p.E1345K	0.033	superfamily_SSF52540,HMMSmart_IQ	PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,superfamily_SSF52540,HMMSmart_MYSc,HMMPfam_Myosin_head,HMMSmart_IQ,HMMPfam_IQ	-	no_errors
FRG1B	284802	genome.wustl.edu	36	20	28225748	28225748	+	RNA	SNP	C	C	T	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	20	28225748	28225748	C	T	SNP	FRG1B	NR_003579	human	genbank	54_36p	+1	provisional	rna	NULL	NULL	1.000	-	-	-	pseudogene
GBA2	57704	genome.wustl.edu	36	9	35731853	35731853	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	9	35731853	35731853	A	G	SNP	GBA2	NM_020944	human	genbank	54_36p	-1	reviewed	missense	c.602	p.V201A	0.996	NULL	PatternScan_HMG_COA_REDUCTASE_2,superfamily_Six-hairpin glycosidases,HMMPfam_DUF608	-	no_errors
UBE2K	3093	genome.wustl.edu	36	4	39455696	39455696	+	Splice_Site	SNP	G	G	C	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	4	39455696	39455696	G	C	SNP	UBE2K	NM_005339	human	genbank	54_36p	+1	reviewed	splice_site	c.400-1	e6-1	1.000	-	-	-	no_errors
TMEM63B	55362	genome.wustl.edu	36	6	44226007	44226007	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	6	44226007	44226007	C	G	SNP	TMEM63B	NM_018426	human	genbank	54_36p	+1	validated	missense	c.1589	p.P530R	1.000	HMMPfam_DUF221	HMMPfam_DUF221	-	no_errors
FCGBP	8857	genome.wustl.edu	36	19	45090206	45090206	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	19	45090206	45090206	C	A	SNP	FCGBP	NM_003890	human	genbank	54_36p	-1	validated	missense	c.6601	p.A2201S	0.002	HMMSmart_VWD,HMMPfam_VWD	HMMSmart_FOLN,HMMSmart_VWD,HMMPfam_VWD,HMMPfam_C8,superfamily_Cysrich_TIL,HMMPfam_TIL,HMMPfam_TIL_assoc,HMMSmart_VWC	-	no_errors
C21orf70	85395	genome.wustl.edu	36	21	45188036	45188036	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	21	45188036	45188036	T	C	SNP	C21orf70	NM_058190	human	genbank	54_36p	+1	predicted	missense	c.139	p.F47L	0.000	NULL	NULL	-	no_errors
USP32	84669	genome.wustl.edu	36	17	55639248	55639248	+	Nonsense_Mutation	SNP	G	A	A	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	17	55639248	55639248	G	A	SNP	USP32	NM_032582	human	genbank	54_36p	-1	validated	nonsense	c.2953	p.R985*	1.000	superfamily_SSF54001,HMMPfam_UCH	superfamily_SSF47473,HMMSmart_EFh,PatternScan_EF_HAND_1,HMMPfam_efhand,HMMSmart_DUSP,HMMPfam_DUF1055,superfamily_SSF54001,HMMPfam_UCH,PatternScan_UCH_2_1,PatternScan_UCH_2_2	-	no_errors
STX16	8675	genome.wustl.edu	36	20	56679757	56679757	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	20	56679757	56679757	C	T	SNP	STX16	NM_001001433	human	genbank	54_36p	+1	reviewed	nonsense	c.790	p.Q264*	1.000	superfamily_t-snare proteins,HMMSmart_SM00397,HMMPfam_SNARE,PatternScan_SYNTAXIN	superfamily_t-snare proteins,HMMPfam_Syntaxin,HMMSmart_SM00397,HMMPfam_SNARE,PatternScan_SYNTAXIN	-	no_errors
GNAS	2778	genome.wustl.edu	36	20	56863449	56863449	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	20	56863449	56863449	A	G	SNP	GNAS	NM_001077490	human	genbank	54_36p	+1	reviewed	missense	c.1547	p.E516G	0.007	NULL	PatternScan_SECE_SEC61G	-	no_errors
MON2	23041	genome.wustl.edu	36	12	61240924	61240924	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	12	61240924	61240924	T	G	SNP	MON2	NM_015026	human	genbank	54_36p	+1	validated	missense	c.3796	p.F1266V	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold,HMMPfam_DUF1981	-	no_errors
CSN1S1	1446	genome.wustl.edu	36	4	70835016	70835016	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	4	70835016	70835016	A	G	SNP	CSN1S1	NM_001890	human	genbank	54_36p	+1	validated	missense	c.104	p.E35G	0.539	NULL	PatternScan_CASEIN_ALPHA_BETA	-	no_errors
ITGB4	3691	genome.wustl.edu	36	17	71243991	71243991	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	17	71243991	71243991	G	C	SNP	ITGB4	NM_000213	human	genbank	54_36p	+1	reviewed	missense	c.1789	p.E597Q	0.997	superfamily_EGF/Laminin,PatternScan_INTEGRIN_BETA	HMMSmart_SM00423,HMMPfam_Integrin_beta,HMMSmart_SM00187,superfamily_vWA-like,superfamily_Integrin domains,superfamily_EGF/Laminin,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_INTEGRIN_BETA,HMMPfam_EGF_2,superfamily_Integrin beta tail domain,HMMPfam_Integrin_B_tail,HMMPfam_Calx-beta,HMMSmart_SM00237,HMMSmart_SM00060,HMMPfam_fn3,superfamily_Fibronectin type III	-	no_errors
QRICH2	84074	genome.wustl.edu	36	17	71789717	71789717	+	Silent	SNP	C	T	T	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	17	71789717	71789717	C	T	SNP	QRICH2	NM_032134	human	genbank	54_36p	-1	provisional	silent	c.3588	p.P1196	0.000	NULL	NULL	-	no_errors
CYP26B1	56603	genome.wustl.edu	36	2	72212998	72212998	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	2	72212998	72212998	G	A	SNP	CYP26B1	NM_019885	human	genbank	54_36p	-1	reviewed	missense	c.1405	p.R469W	1.000	superfamily_Cytochrome_P450	HMMPfam_p450,superfamily_Cytochrome_P450,PatternScan_CYTOCHROME_P450	-	no_errors
ASPSCR1	79058	genome.wustl.edu	36	17	77567969	77567969	+	Silent	SNP	C	G	G	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	17	77567969	77567969	C	G	SNP	ASPSCR1	NM_024083	human	genbank	54_36p	+1	reviewed	silent	c.1410	p.V470	0.065	NULL	superfamily_Ubiquitin-like,HMMPfam_UBX	-	no_errors
PAG1	55824	genome.wustl.edu	36	8	82051506	82051506	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	8	82051506	82051506	G	T	SNP	PAG1	NM_018440	human	genbank	54_36p	-1	reviewed	missense	c.1127	p.A376E	0.118	NULL	NULL	-	no_errors
ANKS1B	56899	genome.wustl.edu	36	12	98164294	98164294	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	12	98164294	98164294	G	T	SNP	ANKS1B	NM_152788	human	genbank	54_36p	-1	validated	missense	c.2236	p.P746T	1.000	NULL	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank,superfamily_SAM/Pointed domain,HMMSmart_SM00454,HMMPfam_SAM_1,superfamily_PH domain-like,HMMSmart_SM00462,HMMPfam_PID	-	no_errors
LPPR4	9890	genome.wustl.edu	36	1	99544765	99544765	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	1	99544765	99544765	C	G	SNP	LPPR4	NM_014839	human	genbank	54_36p	+1	reviewed	missense	c.1903	p.Q635E	0.955	NULL	superfamily_Acid phosphatase/Vanadium-dependent haloperoxidase,HMMPfam_PAP2,HMMSmart_SM00014	-	no_errors
ZNF462	58499	genome.wustl.edu	36	9	108732709	108732709	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	9	108732709	108732709	A	G	SNP	ZNF462	NM_021224	human	genbank	54_36p	+1	validated	missense	c.5930	p.H1977R	1.000	superfamily_beta-sandwich domain of Sec23/24,HMMSmart_SM00355	superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_beta-sandwich domain of Sec23/24	-	no_errors
ENSG00000203878	0	genome.wustl.edu	36	1	111626800	111626800	+	Silent	SNP	C	C	T	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	1	111626800	111626800	C	T	SNP	ENSG00000203878	ENST00000369743	human	ensembl	54_36p	+1	known	silent	c.207	p.D69	0.997	HMMSmart_SM00636,HMMPfam_Glyco_hydro_18,superfamily_(Trans)glycosidases,PatternScan_CHITINASE_18	HMMSmart_SM00636,HMMPfam_Glyco_hydro_18,superfamily_(Trans)glycosidases,PatternScan_CHITINASE_18	-	no_errors
APC	324	genome.wustl.edu	36	5	112207612	112207612	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	5	112207612	112207612	C	G	SNP	APC	NM_000038	human	genbank	54_36p	+1	reviewed	missense	c.8422	p.P2808A	0.960	HMMPfam_EB1_binding	superfamily_ARM repeat,HMMSmart_SM00185,HMMPfam_Arm,HMMPfam_APC_15aa,HMMPfam_APC_crr,HMMPfam_SAMP,HMMPfam_APC_basic,HMMPfam_EB1_binding	-	no_errors
DBC1	1620	genome.wustl.edu	36	9	120969403	120969403	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	9	120969403	120969403	G	C	SNP	DBC1	NM_014618	human	genbank	54_36p	-1	validated	missense	c.2066	p.S689C	1.000	NULL	HMMSmart_SM00457	-	no_errors
DBC1	1620	genome.wustl.edu	36	9	121040847	121040847	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	9	121040847	121040847	G	A	SNP	DBC1	NM_014618	human	genbank	54_36p	-1	validated	missense	c.592	p.R198C	1.000	HMMSmart_SM00457	HMMSmart_SM00457	-	no_errors
SNTB1	6641	genome.wustl.edu	36	8	121656553	121656553	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	8	121656553	121656553	C	T	SNP	SNTB1	NM_021021	human	genbank	54_36p	-1	reviewed	missense	c.1090	p.E364K	1.000	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	HMMSmart_SM00233,superfamily_PH domain-like,superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,HMMPfam_PH	-	no_errors
LOC729794	0	genome.wustl.edu	36	10	124479049	124479049	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	10	124479049	124479049	T	C	SNP	LOC729794	XM_001718748	human	genbank	54_36p	+1	model	missense	c.278	p.V93A	0.900	superfamily_SRCR-like,HMMSmart_SM00202,HMMPfam_SRCR,PatternScan_SRCR_1	superfamily_SRCR-like,HMMSmart_SM00202,HMMPfam_SRCR,PatternScan_SRCR_1	-	no_errors
SQLE	6713	genome.wustl.edu	36	8	126103325	126103325	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	8	126103325	126103325	A	G	SNP	SQLE	ENST00000265896	human	ensembl	54_36p	+1	known	missense	c.1678	p.I560V	0.937	NULL	superfamily_FAD/NAD(P)-binding domain,HMMPfam_DAO,HMMPfam_SE	-	no_errors
WDR33	55339	genome.wustl.edu	36	2	128244872	128244872	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	2	128244872	128244872	C	G	SNP	WDR33	NM_018383	human	genbank	54_36p	-1	reviewed	missense	c.154	p.V52L	1.000	NULL	PatternScan_WD_REPEATS_1,superfamily_WD40_like,HMMSmart_WD40,HMMPfam_WD40,HMMPfam_Collagen	-	no_errors
USP20	10868	genome.wustl.edu	36	9	131671883	131671883	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	9	131671883	131671883	G	A	SNP	USP20	NM_001008563	human	genbank	54_36p	+1	validated	missense	c.1504	p.A502T	0.025	superfamily_SSF54001,HMMPfam_UCH	HMMPfam_zf-UBP,superfamily_SSF54001,HMMPfam_UCH,PatternScan_UCH_2_1,PatternScan_UCH_2_2,HMMSmart_DUSP	-	no_errors
LOC644131	644131	genome.wustl.edu	36	1	145141862	145141862	+	RNA	SNP	T	T	A	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	1	145141862	145141862	T	A	SNP	LOC644131	XR_017481	human	genbank	54_36p	-1	model	rna	NULL	NULL	1.000	-	-	-	no_errors
TCP1	6950	genome.wustl.edu	36	6	160126962	160126962	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	6	160126962	160126962	G	T	SNP	TCP1	NM_030752	human	genbank	54_36p	-1	reviewed	missense	c.337	p.H113N	1.000	superfamily_GroEL-ATPase,HMMPfam_Cpn60_TCP1	superfamily_GroEL-ATPase,HMMPfam_Cpn60_TCP1,PatternScan_TCP1_1,PatternScan_TCP1_2,PatternScan_TCP1_3,superfamily_SSF54849,superfamily_SSF52029	-	no_errors
GRB14	2888	genome.wustl.edu	36	2	165073307	165073307	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	2	165073307	165073307	C	A	SNP	GRB14	NM_004490	human	genbank	54_36p	-1	reviewed	splice_site	c.928-1	e8-1	1.000	-	-	-	no_errors
MGAT1	4245	genome.wustl.edu	36	5	180152398	180152398	+	Silent	SNP	G	A	A	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	5	180152398	180152398	G	A	SNP	MGAT1	NM_002406	human	genbank	54_36p	-1	reviewed	silent	c.180	p.D60	0.006	HMMPfam_GNT-I	HMMPfam_GNT-I,superfamily_SSF53448	-	no_errors
ORC2L	4999	genome.wustl.edu	36	2	201493307	201493307	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	2	201493307	201493307	G	A	SNP	ORC2L	NM_006190	human	genbank	54_36p	-1	reviewed	missense	c.1349	p.T450I	1.000	HMMPfam_ORC2	HMMPfam_ORC2	-	no_errors
CABC1	56997	genome.wustl.edu	36	1	225240788	225240788	+	Silent	SNP	C	C	T	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	1	225240788	225240788	C	T	SNP	CABC1	NM_020247	human	genbank	54_36p	+1	reviewed	silent	c.1671	p.D557	0.998	NULL	HMMPfam_ABC1,superfamily_Protein kinase-like (PK-like)	-	no_errors
AQP12B	285192	genome.wustl.edu	36	2	241270980	241270980	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	2	241270980	241270980	C	T	SNP	AQP12B	ENST00000373310	human	ensembl	54_36p	-1	known	missense	c.16	p.A6T	0.000	NULL	superfamily_MIP	-	no_start_codon
NEU4	129807	genome.wustl.edu	36	2	242404541	242404541	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	2	242404541	242404541	G	C	SNP	NEU4	NM_080741	human	genbank	54_36p	+1	reviewed	missense	c.223	p.G75R	0.673	superfamily_Sialidase	superfamily_Sialidase	-	no_errors
CLUL1	27098	genome.wustl.edu	36	18	623426	623429	+	Frame_Shift_Del	DEL	CTAT	CTAT	-	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	CTAT	CTAT					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	18	623426	623429	CTAT	-	DEL	CLUL1	NM_014410	human	genbank	54_36p	+1	validated	frame_shift_del	c.985_988	p.S330fs	0.887:0.883:0.820:0.827	HMMPfam_Clusterin,HMMSmart_CLa	HMMPfam_Clusterin,HMMSmart_CLb,HMMSmart_CLa	(deletion:cds_exon[623298,623435])	no_errors
CLUL1	27098	genome.wustl.edu	36	18	623434	623441	+	Frame_Shift_Del	DEL	AGGTAAAT	AGGTAAAT	-	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	AGGTAAAT	AGGTAAAT					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	18	623434	623441	AGGTAAAT	-	DEL	CLUL1	NM_014410	human	genbank	54_36p	+1	validated	frame_shift_del	c.993_994	p.D332fs	0.926:0.995	HMMPfam_Clusterin,HMMSmart_CLa	HMMPfam_Clusterin,HMMSmart_CLb,HMMSmart_CLa	(deletion:cds_exon[623298,623435], intron[623436,631326])	no_errors
NF1	4763	genome.wustl.edu	36	17	26574632	26574649	+	In_Frame_Del	DEL	AAATGCTTAGTAGCACAG	AAATGCTTAGTAGCACAG	-	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	AAATGCTTAGTAGCACAG	AAATGCTTAGTAGCACAG					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	17	26574632	26574649	AAATGCTTAGTAGCACAG	-	DEL	NF1	NM_001042492	human	genbank	54_36p	+1	reviewed	in_frame_del	c.1766_1783	p.MLSSTE590in_frame_del	1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.998:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	NULL	HMMSmart_SM00323,superfamily_GTPase activation domain GAP,HMMPfam_RasGAP,PatternScan_RAS_GTPASE_ACTIV_1,HMMSmart_SM00516	(deletion:cds_exon[26574588,26574711])	no_errors
NF1	4763	genome.wustl.edu	36	17	26574697	26574698	+	Frame_Shift_Ins	INS	-	-	TTCTTAAATA	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	-	-					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	17	26574697	26574698	-	TTCTTAAATA	INS	NF1	NM_001042492	human	genbank	54_36p	+1	reviewed	frame_shift_ins	c.1831_1832	p.N614fs	1.000:1.000	NULL	HMMSmart_SM00516,HMMPfam_RasGAP,HMMSmart_SM00323,PatternScan_RAS_GTPASE_ACTIV_1,superfamily_GTPase activation domain GAP	-	no_errors
AKAP6	9472	genome.wustl.edu	36	14	32084666	32084690	+	Frame_Shift_Del	DEL	CCATCATGATGCAAAGAATCAGCAG	CCATCATGATGCAAAGAATCAGCAG	-	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	CCATCATGATGCAAAGAATCAGCAG	CCATCATGATGCAAAGAATCAGCAG					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	14	32084666	32084690	CCATCATGATGCAAAGAATCAGCAG	-	DEL	AKAP6	NM_004274	human	genbank	54_36p	+1	reviewed	frame_shift_del	c.1056_1080	p.H353fs	0.000:0.001:0.001:0.000:0.024:0.031:0.775:0.838:0.823:0.648:0.398:0.386:0.359:0.349:0.268:0.124:0.020:0.005:0.005:0.024:0.071:0.162:0.312:0.332:0.316	NULL	HMMSmart_SM00150,superfamily_Spectrin repeat,PatternScan_PFKB_KINASES_2	(deletion:cds_exon[32084187,32085956])	no_errors
QSER1	79832	genome.wustl.edu	36	11	32912523	32912526	+	Frame_Shift_Del	DEL	CTTC	CTTC	-	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	CTTC	CTTC					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	11	32912523	32912526	CTTC	-	DEL	QSER1	NM_001076786	human	genbank	54_36p	+1	provisional	frame_shift_del	c.2756_2759	p.S920fs	1.000:1.000:1.000:1.000	NULL	NULL	(deletion:cds_exon[32909865,32913557])	no_errors
BRCA1	672	genome.wustl.edu	36	17	38497511	38497512	+	Frame_Shift_Del	DEL	CT	CT	-	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	CT	CT					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	17	38497511	38497512	CT	-	DEL	BRCA1	NM_007294	human	genbank	54_36p	-1	reviewed	frame_shift_del	c.3563_3562	p.R1188fs	0.017:0.015	NULL	superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1,HMMPfam_BRCT,HMMSmart_SM00292,superfamily_BRCT domain	(deletion:cds_exon[38496978,38500403])	no_errors
MEPE	56955	genome.wustl.edu	36	4	88986059	88986059	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	4	88986059	88986059	A	-	DEL	MEPE	NM_020203	human	genbank	54_36p	+1	validated	frame_shift_del	c.1015	p.N339fs	0.372	NULL	HMMPfam_Osteoregulin	(deletion:cds_exon[88985153,88986622])	no_errors
DDX18	8886	genome.wustl.edu	36	2	118291764	118291764	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-29-1776-01A-01W-0639-09	TCGA-29-1776-10A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	58c1b2cd-7f66-46f3-b352-3b4428c6052d	f434f2ce-fcb7-46a3-95b6-b0fa37416b11	2	118291764	118291764	T	-	DEL	DDX18	NM_006773	human	genbank	54_36p	+1	reviewed	frame_shift_del	c.360	p.D120fs	0.243	superfamily_SSF52540	superfamily_SSF52540,HMMSmart_DEXDc,HMMPfam_DEAD,PatternScan_DEAD_ATP_HELICASE,HMMSmart_HELICc,HMMPfam_Helicase_C	(deletion:cds_exon[118291490,118291774])	no_errors
