Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
NES	10763	broad.mit.edu	36	1	154906731	154906731	+	Silent	SNP	G	G	A	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
RC3H1	149041	broad.mit.edu	36	1	172228718	172228718	+	Missense_Mutation	SNP	T	T	A	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	T	T	A	A	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
ACBD6	84320	broad.mit.edu	36	1	178524220	178524220	+	Silent	SNP	G	G	A	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
OPTN	10133	broad.mit.edu	36	10	13207996	13207996	+	Missense_Mutation	SNP	A	A	C	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	A	A	C	C	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
TTC17	55761	broad.mit.edu	36	11	43375487	43375487	+	Missense_Mutation	SNP	T	T	A	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	T	T	A	A	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
NOP2	4839	broad.mit.edu	36	12	6543333	6543333	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
LOH12CR1	118426	broad.mit.edu	36	12	12405482	12405482	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
C12orf60	144608	broad.mit.edu	36	12	14867807	14867807	+	Missense_Mutation	SNP	T	T	G	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	T	T	G	G	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
GCOM1	145781	broad.mit.edu	36	15	55697672	55697672	+	Missense_Mutation	SNP	C	C	G	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
TP53	7157	broad.mit.edu	36	17	7518272	7518272	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
SPTBN4	57731	broad.mit.edu	36	19	45730457	45730457	+	Missense_Mutation	SNP	G	G	A	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
ZNF749	388567	broad.mit.edu	36	19	62647610	62647610	+	Missense_Mutation	SNP	C	C	G	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	C	C	G	G	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
KIDINS220	57498	broad.mit.edu	36	2	8858020	8858020	+	Silent	SNP	C	C	T	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
LRRTM4	80059	broad.mit.edu	36	2	77599406	77599406	+	Missense_Mutation	SNP	A	A	G	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	A	A	G	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
ORC4L	5000	broad.mit.edu	36	2	148409633	148409633	+	Silent	SNP	A	A	G	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	A	A	G	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
ITGB6	3694	broad.mit.edu	36	2	160702284	160702284	+	Missense_Mutation	SNP	T	T	C	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
RBL1	5933	broad.mit.edu	36	20	35069252	35069252	+	Silent	SNP	G	G	A	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
FAM83D	81610	broad.mit.edu	36	20	37014368	37014368	+	Nonsense_Mutation	SNP	G	G	T	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Sequenom;Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
BCAS1	8537	broad.mit.edu	36	20	52025338	52025338	+	Missense_Mutation	SNP	C	C	A	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
TMPRSS3	64699	broad.mit.edu	36	21	42668909	42668909	+	Silent	SNP	G	G	A	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
TBC1D23	55773	broad.mit.edu	36	3	101503764	101503764	+	Missense_Mutation	SNP	T	T	G	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	T	T	G	G	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
COPG	22820	broad.mit.edu	36	3	130462264	130462264	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
COPG	22820	broad.mit.edu	36	3	130469502	130469502	+	Missense_Mutation	SNP	A	A	G	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	A	A	G	G	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
C4orf29	80167	broad.mit.edu	36	4	129160698	129160698	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
RICTOR	253260	broad.mit.edu	36	5	38983252	38983252	+	Silent	SNP	C	C	T	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
SQSTM1	8878	broad.mit.edu	36	5	179183612	179183612	+	Silent	SNP	G	G	A	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
SLC22A23	63027	broad.mit.edu	36	6	3218558	3218558	+	Silent	SNP	G	G	A	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	G	G	A	A	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
DHX16	8449	broad.mit.edu	36	6	30741282	30741282	+	Missense_Mutation	SNP	G	G	T	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
DHX16	8449	broad.mit.edu	36	6	30741394	30741394	+	Missense_Mutation	SNP	C	C	A	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	C	C	A	A	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
ENPP4	22875	broad.mit.edu	36	6	46219244	46219244	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
RNF216	54476	broad.mit.edu	36	7	5727257	5727257	+	Missense_Mutation	SNP	C	C	T	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	C	C	T	T	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
SEMA3E	9723	broad.mit.edu	36	7	82957408	82957408	+	Silent	SNP	T	T	C	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	T	T	C	C	T	T	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
ZKSCAN1	7586	broad.mit.edu	36	7	99468905	99468905	+	Missense_Mutation	SNP	G	G	T	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	G	G	T	T	G	G	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
RECK	8434	broad.mit.edu	36	9	36092105	36092105	+	Missense_Mutation	SNP	A	A	T	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	A	A	T	T	A	A	Unknown	Valid	Somatic	Phase_I	Capture	Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
GFPT2	9945	broad.mit.edu	36	5	179696183	179696183	+	Frame_Shift_Del	DEL	C	-	C	novel	none	TCGA-30-1853-01A-02W-0699-08	TCGA-30-1853-10A-01W-0699-08	C	C	-	-	C	C	Unknown	Valid	Somatic	Phase_I	Capture	Illumina_Capture			Illumina GAIIx	00900ef4-1012-4a8c-a173-e0bbc5efa30d	5337b78f-18b3-4628-a694-24293687d10f
