Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error
ENO3	2027	genome.wustl.edu	36	17	4797768	4797768	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	17	4797768	4797768	A	G	SNP	ENO3	NM_001976	human	genbank	54_36p	+1	reviewed	missense	c.326	p.N109S	1.000	HMMPfam_Enolase_N,superfamily_Enolase N-terminal domain-like	HMMPfam_Enolase_N,superfamily_Enolase N-terminal domain-like,superfamily_Enolase C-terminal domain-like,HMMPfam_Enolase_C,PatternScan_ENOLASE	-	no_errors
TP53	7157	genome.wustl.edu	36	17	7519167	7519167	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	17	7519167	7519167	T	C	SNP	TP53	NM_000546	human	genbank	54_36p	-1	reviewed	missense	c.488	p.Y163C	1.000	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors
PIK3CD	5293	genome.wustl.edu	36	1	9704677	9704677	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	1	9704677	9704677	A	G	SNP	PIK3CD	NM_005026	human	genbank	54_36p	+1	validated	missense	c.2113	p.K705E	1.000	superfamily_Kinase_like	HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_SSF54236,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMSmart_PI3K_C2,superfamily_C2_CaLB,HMMPfam_PI3K_C2,superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka,superfamily_Kinase_like,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors
ZNF333	84449	genome.wustl.edu	36	19	14690218	14690218	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	19	14690218	14690218	G	A	SNP	ZNF333	NM_032433	human	genbank	54_36p	+1	validated	missense	c.1079	p.R360H	0.014	NULL	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
TUSC3	7991	genome.wustl.edu	36	8	15442329	15442329	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	8	15442329	15442329	C	A	SNP	TUSC3	NM_006765	human	genbank	54_36p	+1	reviewed	missense	c.19	p.P7T	1.000	NULL	HMMPfam_OST3_OST6,superfamily_Thioredoxin-like	-	no_errors
KIAA1797	54914	genome.wustl.edu	36	9	20902864	20902864	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	9	20902864	20902864	G	A	SNP	KIAA1797	NM_017794	human	genbank	54_36p	+1	validated	splice_site	c.2719-1	e22-1	1.000	-	-	-	no_errors
uc001ywg.1	0	genome.wustl.edu	36	15	21240258	21240258	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	15	21240258	21240258	G	A	SNP	uc001ywg.1	ENST00000312015	human	ensembl	54_36p	-1	known	missense	c.350	p.A117V	0.011	NULL	NULL	-	no_errors
ARMC3	219681	genome.wustl.edu	36	10	23332200	23332200	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	10	23332200	23332200	G	A	SNP	ARMC3	NM_173081	human	genbank	54_36p	+1	validated	missense	c.1582	p.E528K	1.000	superfamily_ARM repeat	superfamily_ARM repeat,HMMPfam_Arm,HMMSmart_SM00185	-	no_errors
C20orf3	57136	genome.wustl.edu	36	20	24898955	24898955	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	20	24898955	24898955	C	A	SNP	C20orf3	NM_020531	human	genbank	54_36p	-1	validated	missense	c.591	p.M197I	1.000	superfamily_Calcium-dependent phosphotriesterase	superfamily_Calcium-dependent phosphotriesterase,HMMPfam_Str_synth	-	no_errors
EPHX2	2053	genome.wustl.edu	36	8	27425333	27425333	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	8	27425333	27425333	G	A	SNP	EPHX2	NM_001979	human	genbank	54_36p	+1	reviewed	missense	c.724	p.V242M	0.769	superfamily_SSF53474	HMMPfam_Hydrolase,superfamily_SSF56784,superfamily_SSF53474,HMMPfam_Abhydrolase_1	-	no_errors
ZNF165	7718	genome.wustl.edu	36	6	28165022	28165022	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	6	28165022	28165022	A	G	SNP	ZNF165	NM_003447	human	genbank	54_36p	+1	reviewed	missense	c.1253	p.H418R	0.941	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	HMMPfam_SCAN,HMMSmart_SM00431,superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
SDC3	9672	genome.wustl.edu	36	1	31118756	31118756	+	Silent	SNP	C	C	A	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	1	31118756	31118756	C	A	SNP	SDC3	NM_014654	human	genbank	54_36p	-1	validated	silent	c.1218	p.L406	1.000	HMMPfam_Syndecan	HMMPfam_Syndecan,HMMSmart_SM00294,PatternScan_SYNDECAN	-	no_errors
ZNF438	220929	genome.wustl.edu	36	10	31174114	31174114	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	10	31174114	31174114	A	G	SNP	ZNF438	NM_182755	human	genbank	54_36p	-1	validated	missense	c.2269	p.C757R	0.000	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2	-	no_errors
RXFP3	51289	genome.wustl.edu	36	5	33973522	33973522	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	5	33973522	33973522	C	T	SNP	RXFP3	NM_016568	human	genbank	54_36p	+1	provisional	missense	c.920	p.A307V	0.001	superfamily_SSF81321,HMMPfam_7tm_1	PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321,HMMPfam_7tm_1	-	no_errors
EIF2C3	192669	genome.wustl.edu	36	1	36252146	36252146	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	1	36252146	36252146	G	A	SNP	EIF2C3	NM_024852	human	genbank	54_36p	+1	reviewed	missense	c.1316	p.R439Q	1.000	NULL	HMMPfam_DUF1785,superfamily_SSF101690,HMMPfam_PAZ,superfamily_RNaseH_fold,HMMPfam_Piwi	-	no_errors
SPINT1	6692	genome.wustl.edu	36	15	38935781	38935781	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	15	38935781	38935781	G	A	SNP	SPINT1	NM_181642	human	genbank	54_36p	+1	reviewed	missense	c.1352	p.G451D	0.996	NULL	HMMPfam_MANEC,HMMSmart_SM00765,superfamily_BPTI-like,HMMSmart_SM00131,HMMPfam_Kunitz_BPTI,PatternScan_BPTI_KUNITZ_1,HMMPfam_Ldl_recept_a,superfamily_LDL receptor-like module,HMMSmart_SM00192,PatternScan_LDLRA_1	-	no_errors
LRFN2	57497	genome.wustl.edu	36	6	40468113	40468113	+	Silent	SNP	G	G	T	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	6	40468113	40468113	G	T	SNP	LRFN2	NM_020737	human	genbank	54_36p	-1	provisional	silent	c.1917	p.P639	0.925	NULL	superfamily_L domain-like,HMMSmart_SM00369,HMMPfam_LRR_1,HMMSmart_SM00082,superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_fn3,superfamily_Fibronectin type III	-	no_errors
CDC14C	168448	genome.wustl.edu	36	7	48935213	48935213	+	RNA	SNP	T	T	G	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	7	48935213	48935213	T	G	SNP	CDC14C	NR_003595	human	genbank	54_36p	+1	provisional	rna	NULL	NULL	0.853	-	-	-	pseudogene
CACNA1D	776	genome.wustl.edu	36	3	53754752	53754752	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	3	53754752	53754752	C	G	SNP	CACNA1D	NM_000720	human	genbank	54_36p	+1	validated	missense	c.3128	p.T1043S	1.000	superfamily_SSF81324,HMMPfam_Ion_trans	superfamily_SSF81324,HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ	-	no_errors
MBL2	4153	genome.wustl.edu	36	10	54197926	54197926	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	10	54197926	54197926	C	T	SNP	MBL2	NM_000242	human	genbank	54_36p	-1	reviewed	missense	c.724	p.A242T	0.002	HMMSmart_SM00034,superfamily_C-type lectin-like,HMMPfam_Lectin_C,PatternScan_C_TYPE_LECTIN_1	HMMPfam_Collagen,HMMSmart_SM00034,superfamily_C-type lectin-like,HMMPfam_Lectin_C,PatternScan_C_TYPE_LECTIN_1	-	no_errors
LOC645291	645291	genome.wustl.edu	36	1	68400811	68400811	+	RNA	SNP	G	G	A	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	1	68400811	68400811	G	A	SNP	LOC645291	XR_017617	human	genbank	54_36p	-1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
DHX38	9785	genome.wustl.edu	36	16	70695414	70695414	+	Silent	SNP	G	A	A	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	16	70695414	70695414	G	A	SNP	DHX38	NM_014003	human	genbank	54_36p	+1	reviewed	silent	c.1893	p.G631	1.000	HMMSmart_DEXDc,superfamily_SSF52540	HMMSmart_DEXDc,superfamily_SSF52540,PatternScan_DEAH_ATP_HELICASE,HMMSmart_HELICc,HMMPfam_Helicase_C,HMMPfam_HA2,HMMPfam_DUF1605	-	no_errors
ARHGEF17	9828	genome.wustl.edu	36	11	72699279	72699279	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	11	72699279	72699279	G	A	SNP	ARHGEF17	NM_014786	human	genbank	54_36p	+1	validated	missense	c.1948	p.A650T	0.911	NULL	superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_PH domain-like,superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase	-	no_errors
TMEM60	85025	genome.wustl.edu	36	7	77261582	77261582	+	Silent	SNP	G	G	A	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	7	77261582	77261582	G	A	SNP	TMEM60	NM_032936	human	genbank	54_36p	-1	validated	silent	c.45	p.F15	1.000	NULL	NULL	-	no_errors
C10orf58	84293	genome.wustl.edu	36	10	82177222	82177222	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	10	82177222	82177222	C	T	SNP	C10orf58	NM_032333	human	genbank	54_36p	+1	validated	missense	c.566	p.S189L	0.715	NULL	superfamily_Thiordxn-like_fd	-	no_errors
SEMA4D	10507	genome.wustl.edu	36	9	91185808	91185808	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	9	91185808	91185808	C	T	SNP	SEMA4D	NM_006378	human	genbank	54_36p	-1	validated	missense	c.1645	p.D549N	0.049	HMMPfam_PSI,HMMSmart_PSI,superfamily_Plexin-like_fold	superfamily_Sema,HMMPfam_Sema,HMMSmart_Sema,HMMPfam_PSI,HMMSmart_PSI,superfamily_Plexin-like_fold,superfamily_SSF48726,HMMSmart_IG,HMMPfam_ig	-	no_errors
MUC17	140453	genome.wustl.edu	36	7	100473618	100473618	+	Silent	SNP	T	T	G	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	7	100473618	100473618	T	G	SNP	MUC17	NM_001040105	human	genbank	54_36p	+1	provisional	silent	c.12201	p.P4067	0.066	NULL	superfamily_EGF/Laminin,PatternScan_EGF_1,superfamily_SEA domain,HMMSmart_SM00200,HMMPfam_SEA	-	no_errors
STAB2	55576	genome.wustl.edu	36	12	102613523	102613523	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	12	102613523	102613523	G	T	SNP	STAB2	NM_017564	human	genbank	54_36p	+1	reviewed	missense	c.3441	p.M1147I	1.000	superfamily_BIgH3_FAS1	HMMSmart_EGF,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_EGF_alliinase,superfamily_SSF57196,HMMPfam_EGF,superfamily_BIgH3_FAS1,HMMPfam_Fasciclin,HMMSmart_FAS1,HMMPfam_Laminin_EGF,PatternScan_EGF_LAM_1,superfamily_Grow_fac_recept,HMMPfam_EGF_2,HMMSmart_LINK,HMMPfam_Xlink,superfamily_C-type_lectin_fold,PatternScan_LINK_1	-	no_errors
PPRC1	23082	genome.wustl.edu	36	10	103889903	103889903	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	10	103889903	103889903	G	C	SNP	PPRC1	NM_015062	human	genbank	54_36p	+1	reviewed	missense	c.1648	p.A550P	0.072	NULL	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	-	no_errors
GCC2	9648	genome.wustl.edu	36	2	108464615	108464615	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	2	108464615	108464615	G	C	SNP	GCC2	NM_181453	human	genbank	54_36p	+1	reviewed	missense	c.3091	p.E1031Q	0.950	NULL	HMMPfam_GRIP,HMMSmart_Grip	-	no_errors
ZCCHC16	340595	genome.wustl.edu	36	X	111585322	111585322	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	X	111585322	111585322	C	T	SNP	ZCCHC16	NM_001004308	human	genbank	54_36p	+1	validated	missense	c.710	p.S237F	0.002	NULL	HMMSmart_ZnF_C2HC	-	no_errors
KIAA1958	158405	genome.wustl.edu	36	9	114461530	114461530	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	9	114461530	114461530	G	A	SNP	KIAA1958	NM_133465	human	genbank	54_36p	+1	predicted	missense	c.1511	p.S504N	0.981	NULL	NULL	-	no_errors
LOC200810	200810	genome.wustl.edu	36	3	127132140	127132140	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	3	127132140	127132140	C	G	SNP	LOC200810	NM_001015050	human	genbank	54_36p	-1	predicted	missense	c.298	p.E100Q	1.000	NULL	NULL	-	no_errors
C3orf27	23434	genome.wustl.edu	36	3	129775246	129775246	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	3	129775246	129775246	T	A	SNP	C3orf27	NM_007354	human	genbank	54_36p	-1	provisional	missense	c.17	p.H6L	1.000	NULL	NULL	-	no_errors
PTGDS	5730	genome.wustl.edu	36	9	138991965	138991965	+	Silent	SNP	G	G	A	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	9	138991965	138991965	G	A	SNP	PTGDS	NM_000954	human	genbank	54_36p	+1	reviewed	silent	c.114	p.K38	0.611	superfamily_Lipocalins,PatternScan_LIPOCALIN	superfamily_Lipocalins,PatternScan_LIPOCALIN,HMMPfam_Lipocalin	-	no_errors
ANAPC2	29882	genome.wustl.edu	36	9	139201762	139201762	+	Silent	SNP	G	G	A	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	9	139201762	139201762	G	A	SNP	ANAPC2	NM_013366	human	genbank	54_36p	-1	reviewed	silent	c.732	p.S244	1.000	NULL	"HMMPfam_Cullin,superfamily_Cullin homology domain,HMMSmart_SM00182,superfamily_""Winged helix"" DNA-binding domain,HMMPfam_APC2"	-	no_errors
NRG2	9542	genome.wustl.edu	36	5	139212749	139212749	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	5	139212749	139212749	G	A	SNP	NRG2	NM_013982	human	genbank	54_36p	-1	reviewed	missense	c.1364	p.P455L	0.914	HMMPfam_Neuregulin	superfamily_SSF48726,HMMPfam_I-set,HMMSmart_IGc2,superfamily_SSF57196,HMMSmart_EGF,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_Neuregulin	-	no_errors
PCDHB3	56132	genome.wustl.edu	36	5	140462682	140462682	+	Silent	SNP	G	G	A	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	5	140462682	140462682	G	A	SNP	PCDHB3	NM_018937	human	genbank	54_36p	+1	reviewed	silent	c.2265	p.L755	0.355	NULL	HMMPfam_Cadherin_2,superfamily_Cadherin-like,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors
GPR172A	79581	genome.wustl.edu	36	8	145554158	145554158	+	Silent	SNP	C	C	T	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	8	145554158	145554158	C	T	SNP	GPR172A	NM_024531	human	genbank	54_36p	+1	validated	silent	c.198	p.T66	0.976	NULL	HMMPfam_DUF1011	-	no_errors
GPR172A	79581	genome.wustl.edu	36	8	145554521	145554521	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	8	145554521	145554521	C	A	SNP	GPR172A	NM_024531	human	genbank	54_36p	+1	validated	missense	c.561	p.F187L	0.001	NULL	HMMPfam_DUF1011	-	no_errors
GPR172A	79581	genome.wustl.edu	36	8	145554562	145554562	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	8	145554562	145554562	C	G	SNP	GPR172A	NM_024531	human	genbank	54_36p	+1	validated	missense	c.602	p.T201S	0.010	NULL	HMMPfam_DUF1011	-	no_errors
GPR172A	79581	genome.wustl.edu	36	8	145554652	145554652	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	8	145554652	145554652	C	G	SNP	GPR172A	NM_024531	human	genbank	54_36p	+1	validated	nonsense	c.692	p.S231*	0.000	NULL	HMMPfam_DUF1011	-	no_errors
GPR172A	79581	genome.wustl.edu	36	8	145554863	145554863	+	Silent	SNP	C	C	T	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	8	145554863	145554863	C	T	SNP	GPR172A	NM_024531	human	genbank	54_36p	+1	validated	silent	c.903	p.S301	1.000	HMMPfam_DUF1011	HMMPfam_DUF1011	-	no_errors
LOC729497	729497	genome.wustl.edu	36	4	146764604	146764604	+	RNA	SNP	C	C	G	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	4	146764604	146764604	C	G	SNP	LOC729497	XR_015940	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.004	-	-	-	pseudogene
DLX2	1746	genome.wustl.edu	36	2	172673894	172673894	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	2	172673894	172673894	G	A	SNP	DLX2	NM_004405	human	genbank	54_36p	-1	reviewed	missense	c.610	p.R204W	1.000	superfamily_Homeodomain-like,HMMSmart_SM00389,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1	superfamily_Homeodomain-like,HMMSmart_SM00389,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1	-	no_errors
ATP11B	23200	genome.wustl.edu	36	3	184058503	184058503	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	3	184058503	184058503	G	C	SNP	ATP11B	NM_014616	human	genbank	54_36p	+1	validated	missense	c.995	p.S332T	1.000	NULL	HMMPfam_E1-E2_ATPase,superfamily_SSF81653,superfamily_SSF56784,HMMPfam_Hydrolase,PatternScan_ATPASE_E1_E2,superfamily_SSF81660	-	no_errors
IPO9	55705	genome.wustl.edu	36	1	200064968	200064968	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-36-2532-01A-01D-1526-09	TCGA-36-2532-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	63680058-ad96-4f00-9dcb-a3b40d325b05	ddf31ba0-e9f0-44c4-ad17-6ab67ef831ac	1	200064968	200064968	C	T	SNP	IPO9	NM_018085	human	genbank	54_36p	+1	validated	missense	c.8	p.A3V	1.000	NULL	superfamily_ARM repeat,HMMPfam_IBN_N	-	no_errors
