Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error
JSRP1	126306	genome.wustl.edu	36	19	2205190	2205190	+	Silent	SNP	T	T	A	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	19	2205190	2205190	T	A	SNP	JSRP1	NM_144616	human	genbank	54_36p	-1	provisional	silent	c.258	p.G86	0.439	NULL	NULL	-	no_errors
SIRT6	51548	genome.wustl.edu	36	19	4125680	4125680	+	Silent	SNP	C	C	T	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	19	4125680	4125680	C	T	SNP	SIRT6	NM_016539	human	genbank	54_36p	-1	reviewed	silent	c.1002	p.E334	0.195	NULL	superfamily_DHS-like NAD/FAD-binding domain,HMMPfam_SIR2	-	no_errors
TP53	7157	genome.wustl.edu	36	17	7519173	7519173	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	17	7519173	7519173	G	T	SNP	TP53	NM_000546	human	genbank	54_36p	-1	reviewed	missense	c.482	p.A161D	1.000	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors
TAS2R1	50834	genome.wustl.edu	36	5	9682771	9682771	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	5	9682771	9682771	A	T	SNP	TAS2R1	NM_019599	human	genbank	54_36p	-1	reviewed	missense	c.374	p.L125Q	0.059	HMMPfam_TAS2R,superfamily_SSF81321	HMMPfam_TAS2R,superfamily_SSF81321	-	no_errors
TAS2R8	50836	genome.wustl.edu	36	12	10850008	10850008	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	12	10850008	10850008	C	T	SNP	TAS2R8	NM_023918	human	genbank	54_36p	-1	reviewed	missense	c.839	p.G280D	0.024	HMMPfam_TAS2R,superfamily_SSF81321	HMMPfam_TAS2R,superfamily_SSF81321	-	no_errors
TPRXL	348825	genome.wustl.edu	36	3	14081355	14081355	+	Silent	SNP	C	C	T	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	3	14081355	14081355	C	T	SNP	TPRXL	ENST00000326972	human	ensembl	54_36p	+1	known	silent	c.678	p.S226	0.111	NULL	NULL	-	no_errors
CYTSB	92521	genome.wustl.edu	36	17	20089919	20089919	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	17	20089919	20089919	C	T	SNP	CYTSB	NM_001033553	human	genbank	54_36p	+1	validated	missense	c.2440	p.P814S	0.174	NULL	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,HMMSmart_SM00033	-	no_errors
PLXDC2	84898	genome.wustl.edu	36	10	20574440	20574440	+	Silent	SNP	G	G	A	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	10	20574440	20574440	G	A	SNP	PLXDC2	NM_032812	human	genbank	54_36p	+1	provisional	silent	c.1473	p.E491	1.000	NULL	HMMPfam_PSI,HMMSmart_SM00423	-	no_errors
OTOF	9381	genome.wustl.edu	36	2	26552400	26552400	+	Silent	SNP	C	C	T	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	2	26552400	26552400	C	T	SNP	OTOF	NM_194248	human	genbank	54_36p	-1	reviewed	silent	c.2877	p.A959	0.982	superfamily_C2 domain (Calcium/lipid-binding domain CaLB)	HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_C2,HMMPfam_FerI,HMMPfam_FerB	-	no_errors
ITGAD	3681	genome.wustl.edu	36	16	31330155	31330155	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	16	31330155	31330155	T	C	SNP	ITGAD	NM_005353	human	genbank	54_36p	+1	validated	missense	c.1523	p.V508A	0.000	superfamily_Integrin alpha N-terminal domain,HMMSmart_SM00191	superfamily_Integrin alpha N-terminal domain,HMMSmart_SM00191,superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA,HMMPfam_FG-GAP,HMMPfam_Integrin_alpha2,superfamily_Integrin domains,PatternScan_INTEGRIN_ALPHA,HMMPfam_Integrin_alpha	-	no_errors
VARS	7407	genome.wustl.edu	36	6	31855384	31855384	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	6	31855384	31855384	G	C	SNP	VARS	NM_006295	human	genbank	54_36p	-1	reviewed	missense	c.3268	p.P1090A	0.985	superfamily_Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases,HMMPfam_Anticodon_1	HMMPfam_GST_N,superfamily_Glutathione S-transferase (GST) C-terminal domain,HMMPfam_GST_C,superfamily_Nucleotidylyl transferase,HMMPfam_tRNA-synt_1,PatternScan_AA_TRNA_LIGASE_I,superfamily_ValRS/IleRS/LeuRS editing domain,superfamily_Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases,HMMPfam_Anticodon_1	-	no_errors
TCP11	6954	genome.wustl.edu	36	6	35196756	35196756	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	6	35196756	35196756	T	C	SNP	TCP11	NM_001093728	human	genbank	54_36p	-1	validated	missense	c.662	p.N221S	1.000	HMMPfam_Tcp11	HMMPfam_Tcp11	-	no_errors
DNAH8	1769	genome.wustl.edu	36	6	38851586	38851586	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	6	38851586	38851586	A	G	SNP	DNAH8	NM_001371	human	genbank	54_36p	+1	validated	missense	c.1192	p.I398V	1.000	HMMPfam_DHC_N1	HMMPfam_DHC_N1,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,PatternScan_THIOL_PROTEASE_HIS,HMMPfam_AAA_5,HMMPfam_Dynein_heavy	-	no_errors
MED14	9282	genome.wustl.edu	36	X	40425029	40425029	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	X	40425029	40425029	A	T	SNP	MED14	NM_004229	human	genbank	54_36p	-1	reviewed	missense	c.2535	p.S845R	1.000	NULL	HMMPfam_MED14	-	no_errors
WNT7B	7477	genome.wustl.edu	36	22	44705843	44705843	+	Silent	SNP	G	G	A	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	22	44705843	44705843	G	A	SNP	WNT7B	NM_058238	human	genbank	54_36p	-1	reviewed	silent	c.369	p.C123	1.000	HMMPfam_wnt,HMMSmart_SM00097	HMMPfam_wnt,HMMSmart_SM00097,PatternScan_WNT1	-	no_errors
RB1	5925	genome.wustl.edu	36	13	47779463	47779463	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	13	47779463	47779463	C	T	SNP	RB1	NM_000321	human	genbank	54_36p	+1	reviewed	nonsense	c.184	p.Q62*	1.000	NULL	HMMPfam_RB_A,superfamily_Cyclin-like,HMMPfam_RB_B,HMMSmart_SM00385,HMMPfam_Rb_C	-	no_errors
KATNB1	10300	genome.wustl.edu	36	16	56344623	56344623	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	16	56344623	56344623	G	A	SNP	KATNB1	NM_005886	human	genbank	54_36p	+1	reviewed	missense	c.989	p.S330N	0.038	NULL	superfamily_WD40_like,HMMSmart_WD40,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors
GATA5	140628	genome.wustl.edu	36	20	60473304	60473304	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	20	60473304	60473304	C	T	SNP	GATA5	NM_080473	human	genbank	54_36p	-1	reviewed	missense	c.1177	p.A393T	0.583	NULL	HMMPfam_GATA-N,superfamily_SSF57716,HMMSmart_ZnF_GATA,PatternScan_GATA_ZN_FINGER_1,HMMPfam_GATA	-	no_errors
CD6	923	genome.wustl.edu	36	11	60542046	60542046	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	11	60542046	60542046	C	A	SNP	CD6	NM_006725	human	genbank	54_36p	+1	validated	missense	c.1822	p.Q608K	0.206	NULL	superfamily_SRCR-like,HMMSmart_SM00202,HMMPfam_SRCR,PatternScan_SRCR_1	-	no_errors
LOC729217	729217	genome.wustl.edu	36	16	62852596	62852596	+	RNA	SNP	C	C	T	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	16	62852596	62852596	C	T	SNP	LOC729217	XR_015483	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.997	-	-	-	pseudogene
ZNF256	10172	genome.wustl.edu	36	19	63144543	63144543	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	19	63144543	63144543	C	T	SNP	ZNF256	NM_005773	human	genbank	54_36p	-1	validated	nonsense	c.1445	p.W482*	0.000	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2	-	no_errors
CXorf65	158830	genome.wustl.edu	36	X	70240674	70240674	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	X	70240674	70240674	C	A	SNP	CXorf65	NM_001025265	human	genbank	54_36p	-1	predicted	missense	c.440	p.G147V	0.503	NULL	NULL	-	no_errors
DCK	1633	genome.wustl.edu	36	4	72110423	72110423	+	Silent	SNP	G	G	A	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	4	72110423	72110423	G	A	SNP	DCK	NM_000788	human	genbank	54_36p	+1	reviewed	silent	c.576	p.R192	0.997	superfamily_SSF52540,HMMPfam_dNK	superfamily_SSF52540,HMMPfam_dNK	-	no_errors
RAB11FIP5	26056	genome.wustl.edu	36	2	73169925	73169925	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	2	73169925	73169925	C	A	SNP	RAB11FIP5	NM_015470	human	genbank	54_36p	-1	validated	missense	c.458	p.G153V	1.000	superfamily_C2_CaLB	superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_C2,HMMPfam_RBD-FIP	-	no_errors
LOC400403	0	genome.wustl.edu	36	15	75977405	75977405	+	RNA	SNP	G	G	A	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	15	75977405	75977405	G	A	SNP	LOC400403	XR_038194	human	genbank	54_36p	+1	model	rna	NULL	NULL	0.042	-	-	-	pseudogene
SLC38A10	124565	genome.wustl.edu	36	17	76871854	76871854	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	17	76871854	76871854	C	G	SNP	SLC38A10	NM_001037984	human	genbank	54_36p	-1	validated	missense	c.307	p.V103L	1.000	HMMPfam_Aa_trans	HMMPfam_Aa_trans	-	no_errors
THRSP	7069	genome.wustl.edu	36	11	77452720	77452720	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	11	77452720	77452720	G	A	SNP	THRSP	NM_003251	human	genbank	54_36p	+1	reviewed	missense	c.145	p.A49T	0.023	HMMPfam_Spot_14	HMMPfam_Spot_14	-	no_errors
KCTD21	283219	genome.wustl.edu	36	11	77562633	77562633	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	11	77562633	77562633	T	C	SNP	KCTD21	NM_001029859	human	genbank	54_36p	-1	provisional	missense	c.616	p.K206E	1.000	NULL	superfamily_BTB/POZ_fold,HMMSmart_BTB,HMMPfam_K_tetra	-	no_errors
POLR3A	11128	genome.wustl.edu	36	10	79407343	79407343	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	10	79407343	79407343	C	G	SNP	POLR3A	NM_007055	human	genbank	54_36p	-1	validated	missense	c.4072	p.G1358R	1.000	superfamily_SSF64484	superfamily_SSF64484,HMMPfam_RNA_pol_Rpb1_1,HMMSmart_RPOLA_N,HMMPfam_RNA_pol_Rpb1_2,HMMPfam_RNA_pol_Rpb1_3,HMMPfam_RNA_pol_Rpb1_4,HMMPfam_RNA_pol_Rpb1_5	-	no_errors
SEMA3A	10371	genome.wustl.edu	36	7	83474645	83474645	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	7	83474645	83474645	A	C	SNP	SEMA3A	NM_006080	human	genbank	54_36p	-1	reviewed	missense	c.1100	p.V367G	1.000	superfamily_Sema,HMMPfam_Sema,HMMSmart_Sema	superfamily_Sema,HMMPfam_Sema,HMMSmart_Sema,HMMSmart_PSI,superfamily_Plexin-like_fold,superfamily_SSF48726,HMMSmart_IG,HMMPfam_ig	-	no_errors
DBF4	10926	genome.wustl.edu	36	7	87375356	87375356	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	7	87375356	87375356	A	T	SNP	DBF4	NM_006716	human	genbank	54_36p	+1	validated	missense	c.1967	p.D656V	0.457	NULL	HMMPfam_zf-DBF,HMMSmart_SM00586	-	no_errors
ANKRD11	29123	genome.wustl.edu	36	16	87878987	87878987	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	16	87878987	87878987	A	T	SNP	ANKRD11	NM_013275	human	genbank	54_36p	-1	validated	missense	c.1464	p.S488R	0.860	superfamily_Ankyrin repeat	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank	-	no_errors
SAMD9L	219285	genome.wustl.edu	36	7	92599453	92599453	+	Silent	SNP	G	G	A	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	7	92599453	92599453	G	A	SNP	SAMD9L	NM_152703	human	genbank	54_36p	-1	validated	silent	c.3768	p.H1256	0.002	NULL	superfamily_SAM/Pointed domain	-	no_errors
MGAT4A	11320	genome.wustl.edu	36	2	98622746	98622746	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	2	98622746	98622746	C	A	SNP	MGAT4A	NM_012214	human	genbank	54_36p	-1	reviewed	missense	c.1279	p.D427Y	1.000	NULL	HMMPfam_Glyco_transf_54	-	no_errors
ST3GAL6	10402	genome.wustl.edu	36	3	99972425	99972425	+	Silent	SNP	G	G	T	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	3	99972425	99972425	G	T	SNP	ST3GAL6	NM_006100	human	genbank	54_36p	+1	provisional	silent	c.102	p.V34	0.530	NULL	HMMPfam_Glyco_transf_29	-	no_errors
LOC100128601	0	genome.wustl.edu	36	X	102228800	102228800	+	RNA	SNP	A	A	G	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	X	102228800	102228800	A	G	SNP	LOC100128601	XR_039021	human	genbank	54_36p	+1	model	rna	NULL	NULL	0.197	-	-	-	pseudogene
ODF1	4956	genome.wustl.edu	36	8	103641995	103641995	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	8	103641995	103641995	C	G	SNP	ODF1	NM_024410	human	genbank	54_36p	+1	reviewed	missense	c.460	p.R154G	0.988	superfamily_HSP20_chap	superfamily_HSP20_chap	-	no_errors
TUBE1	51175	genome.wustl.edu	36	6	112500765	112500765	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	6	112500765	112500765	C	T	SNP	TUBE1	NM_016262	human	genbank	54_36p	-1	reviewed	missense	c.983	p.S328N	1.000	superfamily_Tubulin C-terminal domain-like,HMMPfam_Tubulin_C	superfamily_Tubulin nucleotide-binding domain-like,HMMPfam_Tubulin,PatternScan_TUBULIN,superfamily_Tubulin C-terminal domain-like,HMMPfam_Tubulin_C	-	no_errors
PGGT1B	5229	genome.wustl.edu	36	5	114580570	114580570	+	Splice_Site	SNP	C	C	G	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	5	114580570	114580570	C	G	SNP	PGGT1B	NM_005023	human	genbank	54_36p	-1	validated	splice_site	c.844-1	e8-1	1.000	-	-	-	no_errors
WDR52	55779	genome.wustl.edu	36	3	114580976	114580976	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	3	114580976	114580976	A	T	SNP	WDR52	NM_018338	human	genbank	54_36p	-1	provisional	missense	c.2165	p.F722Y	0.002	NULL	superfamily_WD40_like,HMMSmart_WD40,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors
QTRTD1	79691	genome.wustl.edu	36	3	115278352	115278352	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	3	115278352	115278352	C	T	SNP	QTRTD1	NM_024638	human	genbank	54_36p	+1	provisional	nonsense	c.619	p.R207*	0.862	superfamily_tRNA_ribo_trans,HMMPfam_TGT	superfamily_tRNA_ribo_trans,HMMPfam_TGT	-	no_errors
CTTNBP2	83992	genome.wustl.edu	36	7	117151845	117151845	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	7	117151845	117151845	C	A	SNP	CTTNBP2	NM_033427	human	genbank	54_36p	-1	reviewed	missense	c.4439	p.S1480I	0.002	NULL	HMMPfam_CortBP2,superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank	-	no_errors
ERCC3	2071	genome.wustl.edu	36	2	127735342	127735342	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	2	127735342	127735342	C	T	SNP	ERCC3	NM_000122	human	genbank	54_36p	-1	reviewed	missense	c.1996	p.D666N	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_ResIII,HMMSmart_SM00490,HMMPfam_Helicase_C	-	no_errors
SPRR1B	6699	genome.wustl.edu	36	1	151271540	151271540	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	1	151271540	151271540	C	A	SNP	SPRR1B	NM_003125	human	genbank	54_36p	+1	provisional	missense	c.95	p.P32Q	0.005	HMMPfam_Cornifin	HMMPfam_Cornifin	-	no_errors
TKTL1	8277	genome.wustl.edu	36	X	153194307	153194307	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	X	153194307	153194307	G	T	SNP	TKTL1	NM_012253	human	genbank	54_36p	+1	validated	missense	c.853	p.V285F	0.000	superfamily_Thiamin diphosphate-binding fold (THDP-binding)	superfamily_Thiamin diphosphate-binding fold (THDP-binding),HMMPfam_Transketolase_N,HMMPfam_Transket_pyr,PatternScan_TRANSKETOLASE_2,superfamily_TK C-terminal domain-like,HMMPfam_Transketolase_C	-	no_errors
ACVR1C	130399	genome.wustl.edu	36	2	158107515	158107515	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	2	158107515	158107515	G	C	SNP	ACVR1C	NM_145259	human	genbank	54_36p	-1	validated	nonsense	c.1049	p.S350*	1.000	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00220,HMMSmart_SM00219,HMMPfam_Pkinase	superfamily_Snake toxin-like,HMMPfam_Activin_recp,HMMPfam_TGF_beta_GS,HMMSmart_SM00467,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00220,HMMSmart_SM00219,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors
BNIP1	662	genome.wustl.edu	36	5	172523349	172523349	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	5	172523349	172523349	C	T	SNP	BNIP1	NM_013979	human	genbank	54_36p	+1	reviewed	missense	c.635	p.T212M	1.000	HMMPfam_Sec20	HMMPfam_Sec20	-	no_errors
NCF2	4688	genome.wustl.edu	36	1	181806573	181806573	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	1	181806573	181806573	C	T	SNP	NCF2	NM_000433	human	genbank	54_36p	-1	reviewed	missense	c.634	p.D212N	1.000	NULL	superfamily_SSF48452,HMMPfam_TPR_1,HMMSmart_TPR,superfamily_SH3,HMMPfam_SH3_1,HMMSmart_SH3,superfamily_SSF54277,HMMPfam_PB1,HMMSmart_PB1	-	no_errors
HES1	3280	genome.wustl.edu	36	3	195337512	195337512	+	Silent	SNP	G	G	A	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	3	195337512	195337512	G	A	SNP	HES1	NM_005524	human	genbank	54_36p	+1	reviewed	silent	c.273	p.L91	1.000	superfamily_HLH_basic,HMMPfam_HLH,HMMSmart_HLH	superfamily_HLH_basic,HMMPfam_HLH,HMMSmart_HLH,HMMPfam_Hairy_orange,HMMSmart_ORANGE	-	no_errors
TOMM20	9804	genome.wustl.edu	36	1	233349831	233349831	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-36-2538-01A-01D-1526-09	TCGA-36-2538-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	db4480de-2a4a-479b-b4cc-ac0e684c3348	a18e2616-db9b-4fa1-910f-92ca7e83b966	1	233349831	233349831	C	T	SNP	TOMM20	NM_014765	human	genbank	54_36p	-1	validated	missense	c.175	p.D59N	1.000	HMMPfam_MAS20,superfamily_Mitochondrial import receptor subunit Tom20	HMMPfam_MAS20,superfamily_Mitochondrial import receptor subunit Tom20	-	no_errors
