Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error
LYRM4	57128	genome.wustl.edu	36	6	5205959	5205959	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	6	5205959	5205959	C	A	SNP	LYRM4	NM_020408	human	genbank	54_36p	-1	validated	missense	c.7	p.A3S	1.000	NULL	HMMPfam_Complex1_LYR	-	no_errors
NLRP14	338323	genome.wustl.edu	36	11	7040309	7040309	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	11	7040309	7040309	G	T	SNP	NLRP14	NM_176822	human	genbank	54_36p	+1	reviewed	missense	c.2974	p.G992W	0.955	superfamily_SSF52047	superfamily_DEATH_like,HMMPfam_PAAD_DAPIN,HMMPfam_NACHT,superfamily_SSF52047	-	no_errors
TP53	7157	genome.wustl.edu	36	17	7518937	7518937	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	17	7518937	7518937	G	A	SNP	TP53	NM_000546	human	genbank	54_36p	-1	reviewed	nonsense	c.637	p.R213*	0.380	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors
DNAH5	1767	genome.wustl.edu	36	5	13841871	13841871	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	5	13841871	13841871	A	C	SNP	DNAH5	NM_001369	human	genbank	54_36p	-1	validated	missense	c.8601	p.I2867M	0.177	superfamily_SSF52540	HMMPfam_DHC_N1,superfamily_Spectrin,HMMPfam_DHC_N2,superfamily_SSF52540,HMMSmart_AAA,HMMPfam_AAA_5,HMMPfam_Dynein_heavy	-	no_errors
THTPA	79178	genome.wustl.edu	36	14	23095973	23095973	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	14	23095973	23095973	G	A	SNP	THTPA	NM_024328	human	genbank	54_36p	+1	validated	missense	c.167	p.R56Q	0.649	HMMPfam_CYTH	HMMPfam_CYTH	-	no_errors
NFE2L3	9603	genome.wustl.edu	36	7	26191499	26191499	+	Silent	SNP	T	T	C	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	7	26191499	26191499	T	C	SNP	NFE2L3	NM_004289	human	genbank	54_36p	+1	reviewed	silent	c.1656	p.D552	0.092	superfamily_Euk_transcr_DNA	superfamily_Euk_transcr_DNA,HMMPfam_bZIP_1,HMMSmart_BRLZ,PatternScan_BZIP_BASIC	-	no_errors
OR2B6	26212	genome.wustl.edu	36	6	28033321	28033321	+	Silent	SNP	G	G	T	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	6	28033321	28033321	G	T	SNP	OR2B6	NM_012367	human	genbank	54_36p	+1	provisional	silent	c.324	p.G108	0.000	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
NF2	4771	genome.wustl.edu	36	22	28420740	28420740	+	Splice_Site	SNP	G	G	C	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	22	28420740	28420740	G	C	SNP	NF2	NM_000268	human	genbank	54_36p	+1	reviewed	splice_site	c.1738-1	e16-1	1.000	-	-	-	no_errors
ENSG00000196161	0	genome.wustl.edu	36	16	28969566	28969566	+	Silent	SNP	C	C	T	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	16	28969566	28969566	C	T	SNP	ENSG00000196161	ENST00000354734	human	ensembl	54_36p	+1	known	silent	c.496	p.L166	0.000	HMMPfam_NPIP	HMMPfam_NPIP	-	no_errors
DPCR1	135656	genome.wustl.edu	36	6	31027532	31027532	+	Silent	SNP	T	T	A	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	6	31027532	31027532	T	A	SNP	DPCR1	ENST00000376299	human	ensembl	54_36p	+1	known	silent	c.174	p.P58	0.000	NULL	NULL	-	no_errors
TIAM1	7074	genome.wustl.edu	36	21	31414625	31414625	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	21	31414625	31414625	T	A	SNP	TIAM1	NM_003253	human	genbank	54_36p	-1	validated	missense	c.4708	p.S1570C	0.055	NULL	superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH,HMMPfam_RBD,HMMSmart_RBD,superfamily_PDZ,HMMPfam_PDZ,HMMSmart_PDZ,superfamily_DH-domain,HMMPfam_RhoGEF,HMMSmart_RhoGEF,PatternScan_DH_1	-	no_errors
CRYZL1	9946	genome.wustl.edu	36	21	33896449	33896449	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	21	33896449	33896449	C	A	SNP	CRYZL1	NM_145858	human	genbank	54_36p	-1	reviewed	nonsense	c.538	p.E180*	0.996	superfamily_NAD(P)-binding Rossmann-fold domains,HMMPfam_ADH_zinc_N	superfamily_GroES-like,HMMPfam_ADH_N,superfamily_NAD(P)-binding Rossmann-fold domains,HMMPfam_ADH_zinc_N	-	no_errors
GALT	2592	genome.wustl.edu	36	9	34638148	34638148	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	9	34638148	34638148	A	G	SNP	GALT	NM_000155	human	genbank	54_36p	+1	reviewed	missense	c.544	p.N182D	1.000	HMMPfam_GalP_UDP_transf,superfamily_HIT-like,PatternScan_GAL_P_UDP_TRANSF_I	HMMPfam_GalP_UDP_transf,superfamily_HIT-like,PatternScan_GAL_P_UDP_TRANSF_I,HMMPfam_GalP_UDP_tr_C	-	no_errors
C5orf42	65250	genome.wustl.edu	36	5	37193674	37193674	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	5	37193674	37193674	C	A	SNP	C5orf42	NM_023073	human	genbank	54_36p	-1	predicted	missense	c.4506	p.Q1502H	0.591	NULL	NULL	-	no_errors
ENSG00000205794	0	genome.wustl.edu	36	4	39721592	39721592	+	Silent	SNP	G	G	A	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	4	39721592	39721592	G	A	SNP	ENSG00000205794	ENST00000381811	human	ensembl	54_36p	-1	known	silent	c.459	p.I153	1.000	superfamily_SSF54637	superfamily_SSF54637,HMMPfam_4HBT	-	no_errors
LOC100128533	0	genome.wustl.edu	36	22	40402974	40402974	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	22	40402974	40402974	T	A	SNP	LOC100128533	XM_001724102	human	genbank	54_36p	-1	model	missense	c.102	p.K34N	0.821	HMMPfam_Laps	HMMPfam_Laps	-	no_errors
SLC14A2	8170	genome.wustl.edu	36	18	41497867	41497867	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	18	41497867	41497867	A	T	SNP	SLC14A2	NM_007163	human	genbank	54_36p	+1	validated	nonsense	c.1471	p.K491*	1.000	NULL	HMMPfam_UT,PatternScan_MULTICOPPER_OXIDASE1	-	no_errors
MDFI	4188	genome.wustl.edu	36	6	41721903	41721903	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	6	41721903	41721903	G	T	SNP	MDFI	NM_005586	human	genbank	54_36p	+1	reviewed	missense	c.138	p.E46D	0.904	NULL	PatternScan_TNFR_NGFR_1	-	no_errors
SLC37A1	54020	genome.wustl.edu	36	21	42857886	42857886	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	21	42857886	42857886	G	A	SNP	SLC37A1	NM_018964	human	genbank	54_36p	+1	reviewed	splice_site	c.1136-1	e13-1	1.000	-	-	-	no_errors
KIAA0240	23506	genome.wustl.edu	36	6	42904552	42904552	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	6	42904552	42904552	T	C	SNP	KIAA0240	NM_015349	human	genbank	54_36p	+1	validated	missense	c.503	p.V168A	1.000	NULL	NULL	-	no_errors
ABCG8	64241	genome.wustl.edu	36	2	43933428	43933428	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	2	43933428	43933428	T	C	SNP	ABCG8	NM_022437	human	genbank	54_36p	+1	reviewed	missense	c.881	p.L294S	0.936	superfamily_P-loop containing nucleoside triphosphate hydrolases	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_ABC_tran,PatternScan_ABC_TRANSPORTER_1,HMMPfam_ABC2_membrane	-	no_errors
FCGBP	8857	genome.wustl.edu	36	19	45049530	45049530	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	19	45049530	45049530	C	A	SNP	FCGBP	NM_003890	human	genbank	54_36p	-1	validated	missense	c.15623	p.C5208F	0.031	HMMPfam_TIL_assoc,HMMSmart_FOLN	HMMSmart_FOLN,HMMSmart_VWD,HMMPfam_VWD,HMMPfam_C8,superfamily_Cysrich_TIL,HMMPfam_TIL,HMMPfam_TIL_assoc,HMMSmart_VWC	-	no_errors
ADNP	23394	genome.wustl.edu	36	20	48943775	48943775	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	20	48943775	48943775	C	G	SNP	ADNP	NM_015339	human	genbank	54_36p	-1	reviewed	missense	c.883	p.V295L	0.970	NULL	PatternScan_HOMEOBOX_1,HMMSmart_ZnF_C2H2,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_Homeodomain_like,HMMSmart_HOX,HMMPfam_Homeobox	-	no_errors
DDC	1644	genome.wustl.edu	36	7	50579173	50579173	+	Silent	SNP	G	G	A	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	7	50579173	50579173	G	A	SNP	DDC	NM_000790	human	genbank	54_36p	-1	reviewed	silent	c.105	p.P35	0.165	superfamily_PLP-dependent transferases,HMMPfam_Pyridoxal_deC	superfamily_PLP-dependent transferases,HMMPfam_Pyridoxal_deC,PatternScan_DDC_GAD_HDC_YDC	-	no_errors
MPO	4353	genome.wustl.edu	36	17	53712337	53712337	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	17	53712337	53712337	T	G	SNP	MPO	NM_000250	human	genbank	54_36p	-1	reviewed	missense	c.286	p.M96L	0.995	NULL	superfamily_Heme-dependent peroxidases,HMMPfam_An_peroxidase,PatternScan_PEROXIDASE_1	-	no_errors
CPT1C	126129	genome.wustl.edu	36	19	54899825	54899825	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	19	54899825	54899825	C	T	SNP	CPT1C	NM_152359	human	genbank	54_36p	+1	provisional	missense	c.740	p.P247L	0.971	superfamily_CoA-dependent acyltransferases,HMMPfam_Carn_acyltransf	superfamily_CoA-dependent acyltransferases,HMMPfam_Carn_acyltransf,PatternScan_ACYLTRANSF_C_1,PatternScan_ACYLTRANSF_C_2	-	no_errors
RTN4RL2	349667	genome.wustl.edu	36	11	56991758	56991758	+	Silent	SNP	G	G	T	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	11	56991758	56991758	G	T	SNP	RTN4RL2	NM_178570	human	genbank	54_36p	+1	provisional	silent	c.132	p.V44	0.996	superfamily_SSF52058,HMMSmart_LRRNT	superfamily_SSF52058,HMMSmart_LRRNT,HMMPfam_LRR_1,HMMSmart_LRR_TYP,HMMSmart_LRRCT	-	no_errors
DDB1	1642	genome.wustl.edu	36	11	60840402	60840402	+	Silent	SNP	T	T	C	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	11	60840402	60840402	T	C	SNP	DDB1	NM_001923	human	genbank	54_36p	-1	validated	silent	c.1341	p.E447	0.995	NULL	HMMPfam_CPSF_A	-	no_errors
PLEKHG3	26030	genome.wustl.edu	36	14	64269300	64269300	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	14	64269300	64269300	G	T	SNP	PLEKHG3	NM_015549	human	genbank	54_36p	+1	validated	nonsense	c.1105	p.E369*	1.000	NULL	superfamily_DH-domain,HMMPfam_RhoGEF,superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH	-	no_errors
CATSPER1	117144	genome.wustl.edu	36	11	65549796	65549796	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	11	65549796	65549796	G	C	SNP	CATSPER1	NM_053054	human	genbank	54_36p	-1	reviewed	missense	c.631	p.Q211E	0.000	superfamily_Voltage-gated potassium channels	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	-	no_errors
LOC100129267	0	genome.wustl.edu	36	10	65600039	65600039	+	RNA	SNP	G	G	T	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	10	65600039	65600039	G	T	SNP	LOC100129267	XR_037245	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.053	-	-	-	pseudogene
SIPA1L1	26037	genome.wustl.edu	36	14	71275621	71275621	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	14	71275621	71275621	A	T	SNP	SIPA1L1	NM_015556	human	genbank	54_36p	+1	provisional	missense	c.5405	p.D1802V	1.000	NULL	superfamily_Rap/Ran-GAP (Pfam 02145),HMMPfam_Rap_GAP,superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228	-	no_errors
UBE2O	63893	genome.wustl.edu	36	17	71907847	71907847	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	17	71907847	71907847	C	A	SNP	UBE2O	NM_022066	human	genbank	54_36p	-1	validated	missense	c.1131	p.Q377H	1.000	NULL	PatternScan_UBIQUITIN_CONJUGAT_1,superfamily_UBQ-conjugat/RWD-like,HMMSmart_UBCc,HMMPfam_UQ_con	-	no_errors
RBM25	58517	genome.wustl.edu	36	14	72639673	72639673	+	Silent	SNP	C	C	G	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	14	72639673	72639673	C	G	SNP	RBM25	NM_021239	human	genbank	54_36p	+1	validated	silent	c.888	p.G296	1.000	superfamily_RNA-binding domain RBD	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1,superfamily_PWI domain,HMMSmart_SM00311,HMMPfam_PWI	-	no_errors
MESDC2	23184	genome.wustl.edu	36	15	79061542	79061542	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	15	79061542	79061542	G	A	SNP	MESDC2	NM_015154	human	genbank	54_36p	-1	validated	missense	c.250	p.H84Y	1.000	HMMPfam_Mesd	HMMPfam_Mesd	-	no_errors
BCMO1	53630	genome.wustl.edu	36	16	79878421	79878421	+	Silent	SNP	C	C	G	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	16	79878421	79878421	C	G	SNP	BCMO1	NM_017429	human	genbank	54_36p	+1	reviewed	silent	c.1323	p.L441	0.725	HMMPfam_RPE65	HMMPfam_RPE65	-	no_errors
FLRT2	23768	genome.wustl.edu	36	14	85158659	85158659	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	14	85158659	85158659	G	A	SNP	FLRT2	NM_013231	human	genbank	54_36p	+1	reviewed	missense	c.1048	p.V350I	0.997	superfamily_SSF52058,HMMSmart_LRRCT,HMMPfam_LRRCT	superfamily_SSF52058,HMMPfam_LRRNT,HMMSmart_LRRNT,HMMPfam_LRR_1,HMMSmart_LRR_TYP,HMMSmart_LRRCT,HMMPfam_LRRCT,HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like	-	no_errors
PPM2C	54704	genome.wustl.edu	36	8	95003893	95003893	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	8	95003893	95003893	G	C	SNP	PPM2C	NM_018444	human	genbank	54_36p	+1	reviewed	missense	c.430	p.D144H	1.000	superfamily_Protein serine/threonine phosphatase 2C catalytic domain,HMMSmart_SM00332,PatternScan_PP2C	superfamily_Protein serine/threonine phosphatase 2C catalytic domain,HMMSmart_SM00332,PatternScan_PP2C,HMMPfam_PP2C	-	no_errors
LOC650656	650656	genome.wustl.edu	36	9	98021190	98021190	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	9	98021190	98021190	T	C	SNP	LOC650656	XM_001717913	human	genbank	54_36p	+1	model	missense	c.95	p.L32P	0.014	NULL	NULL	-	no_errors
CTHRC1	115908	genome.wustl.edu	36	8	104453179	104453179	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	8	104453179	104453179	C	G	SNP	CTHRC1	NM_138455	human	genbank	54_36p	+1	provisional	missense	c.119	p.A40G	0.882	NULL	HMMPfam_Collagen	-	no_errors
CNNM2	54805	genome.wustl.edu	36	10	104669490	104669490	+	Silent	SNP	C	C	T	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	10	104669490	104669490	C	T	SNP	CNNM2	NM_017649	human	genbank	54_36p	+1	validated	silent	c.1263	p.T421	0.996	HMMPfam_DUF21	HMMPfam_DUF21,HMMPfam_CBS	-	no_errors
CXorf41	139212	genome.wustl.edu	36	X	106352657	106352657	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	X	106352657	106352657	T	C	SNP	CXorf41	NM_173494	human	genbank	54_36p	+1	predicted	missense	c.359	p.V120A	1.000	NULL	NULL	-	no_errors
LOC100128086	0	genome.wustl.edu	36	9	108918866	108918866	+	RNA	SNP	C	C	G	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	9	108918866	108918866	C	G	SNP	LOC100128086	XR_039419	human	genbank	54_36p	+1	model	rna	NULL	NULL	0.005	-	-	-	pseudogene
CDC40	51362	genome.wustl.edu	36	6	110608462	110608462	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	6	110608462	110608462	C	A	SNP	CDC40	NM_015891	human	genbank	54_36p	+1	reviewed	missense	c.122	p.T41N	0.988	NULL	superfamily_WD40_like,HMMSmart_WD40,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors
ATP11A	23250	genome.wustl.edu	36	13	112529089	112529089	+	Silent	SNP	C	C	A	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	13	112529089	112529089	C	A	SNP	ATP11A	NM_032189	human	genbank	54_36p	+1	reviewed	silent	c.1104	p.V368	0.996	superfamily_Calcium ATPase transmembrane domain M	superfamily_Calcium ATPase transmembrane domain M,HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A,superfamily_HAD-like,PatternScan_ATPASE_E1_E2,superfamily_Metal cation-transporting ATPase ATP-binding domain N	-	no_errors
ZNF259	8882	genome.wustl.edu	36	11	116160330	116160330	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	11	116160330	116160330	C	A	SNP	ZNF259	NM_003904	human	genbank	54_36p	-1	provisional	nonsense	c.865	p.E289*	1.000	HMMPfam_zf-ZPR1,HMMSmart_Zpr1	HMMPfam_zf-ZPR1,HMMSmart_Zpr1	-	no_errors
DSCAML1	57453	genome.wustl.edu	36	11	116807554	116807554	+	Silent	SNP	G	G	T	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	11	116807554	116807554	G	T	SNP	DSCAML1	NM_020693	human	genbank	54_36p	-1	provisional	silent	c.5460	p.R1820	0.986	NULL	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,HMMPfam_I-set,HMMSmart_SM00406,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	-	no_errors
SLC25A43	203427	genome.wustl.edu	36	X	118428191	118428191	+	Silent	SNP	G	G	A	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	X	118428191	118428191	G	A	SNP	SLC25A43	NM_145305	human	genbank	54_36p	+1	provisional	silent	c.528	p.P176	0.860	superfamily_Mitochondrial carrier,HMMPfam_Mito_carr	superfamily_Mitochondrial carrier,HMMPfam_Mito_carr	-	no_errors
HIP1R	9026	genome.wustl.edu	36	12	121910655	121910655	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	12	121910655	121910655	G	A	SNP	HIP1R	NM_003959	human	genbank	54_36p	+1	validated	missense	c.2504	p.R835Q	1.000	superfamily_SSF109885,HMMSmart_ILWEQ,HMMPfam_I_LWEQ	HMMPfam_ANTH,superfamily_ENTH_VHS,HMMSmart_ENTH,superfamily_SSF109885,HMMSmart_ILWEQ,HMMPfam_I_LWEQ	-	no_errors
C11orf63	79864	genome.wustl.edu	36	11	122261875	122261875	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	11	122261875	122261875	T	G	SNP	C11orf63	NM_024806	human	genbank	54_36p	+1	validated	missense	c.108	p.H36Q	0.002	NULL	NULL	-	no_errors
CASR	846	genome.wustl.edu	36	3	123463592	123463592	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	3	123463592	123463592	G	C	SNP	CASR	NM_000388	human	genbank	54_36p	+1	reviewed	missense	c.1020	p.R340S	0.998	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor,PatternScan_G_PROTEIN_RECEP_F3_1,HMMPfam_NCD3G,PatternScan_G_PROTEIN_RECEP_F3_2,HMMPfam_7tm_3,PatternScan_G_PROTEIN_RECEP_F3_3	-	no_errors
PANX3	116337	genome.wustl.edu	36	11	123992488	123992488	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	11	123992488	123992488	A	T	SNP	PANX3	NM_052959	human	genbank	54_36p	+1	reviewed	missense	c.433	p.S145C	1.000	NULL	NULL	-	no_errors
RICS	9743	genome.wustl.edu	36	11	128344581	128344581	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	11	128344581	128344581	G	A	SNP	RICS	NM_014715	human	genbank	54_36p	-1	validated	nonsense	c.4648	p.Q1550*	0.728	NULL	superfamily_Rho_GAP,HMMSmart_RhoGAP,HMMPfam_RhoGAP	-	no_errors
CRAT	1384	genome.wustl.edu	36	9	130909994	130909994	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	9	130909994	130909994	C	T	SNP	CRAT	NM_000755	human	genbank	54_36p	-1	reviewed	missense	c.211	p.D71N	1.000	superfamily_CoA-dependent acyltransferases,HMMPfam_Carn_acyltransf	superfamily_CoA-dependent acyltransferases,HMMPfam_Carn_acyltransf,PatternScan_ACYLTRANSF_C_1,PatternScan_ACYLTRANSF_C_2	-	no_errors
USP26	83844	genome.wustl.edu	36	X	131989818	131989818	+	Nonsense_Mutation	SNP	T	T	A	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	X	131989818	131989818	T	A	SNP	USP26	NM_031907	human	genbank	54_36p	-1	reviewed	nonsense	c.97	p.K33*	0.002	NULL	superfamily_Cysteine proteinases,HMMPfam_UCH,PatternScan_UCH_2_1,PatternScan_UCH_2_2	-	no_errors
CXorf19	0	genome.wustl.edu	36	X	138272020	138272020	+	Silent	SNP	G	G	A	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	X	138272020	138272020	G	A	SNP	CXorf19	ENST00000309296	human	ensembl	54_36p	+1	known	silent	c.96	p.L32	0.951	HMMPfam_SNURF	HMMPfam_SNURF	-	no_stop_codon
PSD2	84249	genome.wustl.edu	36	5	139173966	139173966	+	Silent	SNP	A	A	T	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	5	139173966	139173966	A	T	SNP	PSD2	NM_032289	human	genbank	54_36p	+1	provisional	silent	c.849	p.S283	0.969	HMMSmart_SM00222,HMMPfam_Sec7	HMMSmart_SM00222,HMMPfam_Sec7,superfamily_Sec7 domain,HMMPfam_PH,HMMSmart_SM00233,superfamily_PH domain-like	-	no_errors
PCDHB1	29930	genome.wustl.edu	36	5	140412895	140412895	+	Silent	SNP	C	C	G	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	5	140412895	140412895	C	G	SNP	PCDHB1	NM_013340	human	genbank	54_36p	+1	reviewed	silent	c.1656	p.V552	0.266	superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1	HMMSmart_CA,HMMPfam_Cadherin_2,superfamily_Cadherin,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors
FAT2	2196	genome.wustl.edu	36	5	150867315	150867315	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	5	150867315	150867315	G	T	SNP	FAT2	NM_001447	human	genbank	54_36p	-1	reviewed	missense	c.12110	p.P4037H	0.948	superfamily_EGF/Laminin	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282,HMMPfam_Laminin_G_2,superfamily_EGF/Laminin,HMMSmart_SM00179,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2	-	no_errors
NPR1	4881	genome.wustl.edu	36	1	151918617	151918617	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	1	151918617	151918617	C	G	SNP	NPR1	NM_000906	human	genbank	54_36p	+1	validated	missense	c.409	p.L137V	1.000	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor,PatternScan_ANF_RECEPTORS,HMMSmart_SM00219,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00220,HMMPfam_Pkinase,HMMSmart_SM00044,superfamily_Adenylyl and guanylyl cyclase catalytic domain,HMMPfam_Guanylate_cyc,PatternScan_GUANYLATE_CYCLASE_1	-	no_errors
FBXW7	55294	genome.wustl.edu	36	4	153478406	153478406	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	4	153478406	153478406	C	G	SNP	FBXW7	NM_033632	human	genbank	54_36p	-1	reviewed	missense	c.859	p.E287Q	1.000	superfamily_WD40 repeat-like,superfamily_F-box domain,HMMPfam_F-box,HMMSmart_SM00256	superfamily_WD40 repeat-like,superfamily_F-box domain,HMMPfam_F-box,HMMSmart_SM00256,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors
KIAA0907	22889	genome.wustl.edu	36	1	154162065	154162065	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	1	154162065	154162065	G	C	SNP	KIAA0907	NM_014949	human	genbank	54_36p	-1	predicted	missense	c.875	p.P292R	1.000	superfamily_Eukaryotic type KH-domain (KH-domain type I)	superfamily_Eukaryotic type KH-domain (KH-domain type I)	-	no_errors
CD302	9936	genome.wustl.edu	36	2	160344931	160344931	+	Silent	SNP	C	C	T	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	2	160344931	160344931	C	T	SNP	CD302	NM_014880	human	genbank	54_36p	-1	validated	silent	c.300	p.A100	0.178	superfamily_C-type lectin-like,HMMSmart_SM00034,HMMPfam_Lectin_C	superfamily_C-type lectin-like,HMMSmart_SM00034,HMMPfam_Lectin_C	-	no_errors
GTF3C3	9330	genome.wustl.edu	36	2	197362223	197362223	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	2	197362223	197362223	C	A	SNP	GTF3C3	NM_012086	human	genbank	54_36p	-1	provisional	missense	c.843	p.L281F	0.998	superfamily_Protein prenylyltransferase,HMMSmart_SM00028	HMMSmart_SM00028,superfamily_Protein prenylyltransferase,HMMPfam_TPR_2,superfamily_TPR-like,HMMPfam_TPR_1	-	no_errors
ZNF281	23528	genome.wustl.edu	36	1	198645357	198645357	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	1	198645357	198645357	C	G	SNP	ZNF281	NM_012482	human	genbank	54_36p	-1	provisional	missense	c.100	p.G34R	0.947	NULL	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
RAPH1	65059	genome.wustl.edu	36	2	204013113	204013113	+	Silent	SNP	C	C	T	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	2	204013113	204013113	C	T	SNP	RAPH1	NM_213589	human	genbank	54_36p	-1	validated	silent	c.3045	p.K1015	0.998	NULL	HMMSmart_SM00314,HMMPfam_RA,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	-	no_errors
CTLA4	1493	genome.wustl.edu	36	2	204444406	204444406	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	2	204444406	204444406	G	A	SNP	CTLA4	NM_005214	human	genbank	54_36p	+1	reviewed	missense	c.518	p.G173E	0.912	NULL	superfamily_SSF48726,HMMSmart_IGv,HMMPfam_V-set	-	no_errors
BATF3	55509	genome.wustl.edu	36	1	210926791	210926791	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	1	210926791	210926791	G	A	SNP	BATF3	NM_018664	human	genbank	54_36p	-1	reviewed	missense	c.349	p.R117W	0.279	NULL	HMMPfam_bZIP_1,HMMSmart_BRLZ,PatternScan_BZIP_BASIC	-	no_errors
ERBB4	2066	genome.wustl.edu	36	2	211959844	211959844	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	2	211959844	211959844	T	C	SNP	ERBB4	NM_005235	human	genbank	54_36p	-1	reviewed	missense	c.3460	p.M1154V	0.997	NULL	superfamily_L domain-like,HMMPfam_Recep_L_domain,HMMSmart_SM00261,HMMPfam_Furin-like,superfamily_Growth factor receptor domain,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_YLP	-	no_errors
LOC643454	643454	genome.wustl.edu	36	1	212722689	212722689	+	RNA	SNP	C	C	T	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	1	212722689	212722689	C	T	SNP	LOC643454	XR_042294	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.972	-	-	-	pseudogene
PSEN2	5664	genome.wustl.edu	36	1	225146072	225146072	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-36-2539-01A-01D-1526-09	TCGA-36-2539-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	df50e3ca-95af-4da4-a694-95572185a36a	f97d6470-9722-4ce9-8fa5-d7e120e125e6	1	225146072	225146072	G	A	SNP	PSEN2	NM_000447	human	genbank	54_36p	+1	reviewed	missense	c.976	p.D326N	1.000	HMMPfam_Presenilin,HMMSmart_SM00730	HMMPfam_Presenilin,HMMSmart_SM00730	-	no_errors
