Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error
MYOM2	9172	genome.wustl.edu	36	8	2037942	2037942	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	8	2037942	2037942	G	C	SNP	MYOM2	NM_003970	human	genbank	54_36p	+1	validated	missense	c.2698	p.D900H	0.048	superfamily_FN_III-like	superfamily_SSF48726,HMMPfam_I-set,HMMSmart_IG,superfamily_FN_III-like,HMMSmart_FN3,HMMPfam_fn3,HMMPfam_ig,HMMSmart_IGc2	-	no_errors
KREMEN2	79412	genome.wustl.edu	36	16	2954559	2954559	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	16	2954559	2954559	C	G	SNP	KREMEN2	NM_172229	human	genbank	54_36p	+1	reviewed	missense	c.37	p.L13V	0.001	superfamily_Kringle-like	superfamily_Kringle-like,HMMSmart_SM00130,HMMPfam_Kringle,PatternScan_KRINGLE_1,HMMSmart_SM00321,HMMPfam_WSC,superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042	-	no_errors
VISA	57506	genome.wustl.edu	36	20	3793437	3793437	+	Splice_Site	SNP	T	T	G	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	20	3793437	3793437	T	G	SNP	VISA	NM_020746	human	genbank	54_36p	+1	validated	splice_site	c.1158+2	e5+2	0.969	-	-	-	no_errors
DNAJA3	9093	genome.wustl.edu	36	16	4415905	4415905	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	16	4415905	4415905	C	A	SNP	DNAJA3	NM_005147	human	genbank	54_36p	+1	validated	missense	c.22	p.R8S	1.000	NULL	superfamily_DnaJ_N,HMMSmart_DnaJ,HMMPfam_DnaJ,PatternScan_DNAJ_1,superfamily_HSP_DnaJ_cys-rich,HMMPfam_DnaJ_CXXCXGXG,HMMPfam_DnaJ_C,superfamily_HSP40_DnaJ_pep	-	no_errors
SLC29A4	222962	genome.wustl.edu	36	7	5303263	5303263	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	7	5303263	5303263	C	T	SNP	SLC29A4	NM_001040661	human	genbank	54_36p	+1	reviewed	missense	c.790	p.R264W	0.639	superfamily_MFS general substrate transporter,HMMPfam_Nucleoside_tran	superfamily_MFS general substrate transporter,HMMPfam_Nucleoside_tran	-	no_errors
GAPDH	2597	genome.wustl.edu	36	12	6516803	6516803	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	12	6516803	6516803	G	C	SNP	GAPDH	NM_002046	human	genbank	54_36p	+1	reviewed	missense	c.511	p.V171L	1.000	superfamily_NAD(P)-binding Rossmann-fold domains,superfamily_Glyceraldehyde-3-phosphate dehydrogenase-like C-terminal domain,HMMPfam_Gp_dh_C	HMMPfam_Gp_dh_N,superfamily_NAD(P)-binding Rossmann-fold domains,PatternScan_GAPDH,superfamily_Glyceraldehyde-3-phosphate dehydrogenase-like C-terminal domain,HMMPfam_Gp_dh_C	-	no_errors
TP53	7157	genome.wustl.edu	36	17	7519131	7519131	+	Missense_Mutation	SNP	C	T	T	rs28934578	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	17	7519131	7519131	C	T	SNP	TP53	NM_000546	human	genbank	54_36p	-1	reviewed	missense	c.524	p.R175H	1.000	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors
CAMTA1	23261	genome.wustl.edu	36	1	7646122	7646122	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	1	7646122	7646122	G	C	SNP	CAMTA1	NM_015215	human	genbank	54_36p	+1	validated	missense	c.928	p.E310Q	1.000	NULL	HMMPfam_CG-1,superfamily_E set domains,HMMPfam_TIG,superfamily_Ankyrin repeat,HMMPfam_Ank,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_IQ	-	no_errors
PLCB4	5332	genome.wustl.edu	36	20	9350041	9350041	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	20	9350041	9350041	G	T	SNP	PLCB4	NM_000933	human	genbank	54_36p	+1	reviewed	missense	c.2216	p.R739L	1.000	superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_C2	superfamily_SSF50729,superfamily_SSF47473,HMMPfam_efhand_like,HMMSmart_PLCXc,HMMPfam_PI-PLC-X,superfamily_PLC-like_Pdiesterase_TIM-brl,HMMPfam_PI-PLC-Y,HMMSmart_PLCYc,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_C2,HMMPfam_DUF1154	-	no_errors
ENSG00000111788	0	genome.wustl.edu	36	12	9356533	9356533	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	12	9356533	9356533	C	A	SNP	ENSG00000111788	ENST00000341155	human	ensembl	54_36p	+1	known	nonsense	c.2514	p.C838*	0.999	HMMSmart_HELICc2	superfamily_SSF52540,HMMSmart_DEXDc2,HMMPfam_DEAD_2,HMMSmart_HELICc2	-	no_errors
DNAH9	1770	genome.wustl.edu	36	17	11513268	11513268	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	17	11513268	11513268	G	A	SNP	DNAH9	NM_001372	human	genbank	54_36p	+1	reviewed	missense	c.2894	p.R965Q	0.947	NULL	HMMPfam_DHC_N1,superfamily_Spectrin repeat,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA_5,HMMPfam_Dynein_heavy,PatternScan_CPSASE_2	-	no_errors
PDE3B	5140	genome.wustl.edu	36	11	14622492	14622492	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	11	14622492	14622492	G	C	SNP	PDE3B	NM_000922	human	genbank	54_36p	+1	validated	missense	c.295	p.E99Q	0.999	NULL	superfamily_HD-domain/PDEase-like,HMMSmart_SM00471,HMMPfam_PDEase_I,PatternScan_PDEASE_I	-	no_errors
OR10H1	26539	genome.wustl.edu	36	19	15778978	15778978	+	Silent	SNP	G	G	A	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	19	15778978	15778978	G	A	SNP	OR10H1	NM_013940	human	genbank	54_36p	-1	validated	silent	c.870	p.I290	1.000	superfamily_SSF81321,HMMPfam_7tm_1	PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321,HMMPfam_7tm_1	-	no_errors
SLC7A2	6542	genome.wustl.edu	36	8	17445289	17445289	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	8	17445289	17445289	C	T	SNP	SLC7A2	NM_003046	human	genbank	54_36p	+1	validated	missense	c.182	p.T61I	0.526	NULL	HMMPfam_AA_permease	-	no_errors
PI4KAP1	728233	genome.wustl.edu	36	22	18763893	18763893	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	22	18763893	18763893	G	C	SNP	PI4KAP1	ENST00000400467	human	ensembl	54_36p	-1	known	nonsense	c.1707	p.Y569*	1.000	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00146	superfamily_Protein kinase-like (PK-like),HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors
LATS2	26524	genome.wustl.edu	36	13	20451914	20451914	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	13	20451914	20451914	C	T	SNP	LATS2	NM_014572	human	genbank	54_36p	-1	reviewed	nonsense	c.2688	p.W896*	1.000	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase	HMMPfam_UBA,superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,HMMSmart_S_TK_X,HMMPfam_Pkinase_C	-	no_errors
NFATC4	4776	genome.wustl.edu	36	14	23915540	23915540	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	14	23915540	23915540	G	T	SNP	NFATC4	NM_004554	human	genbank	54_36p	+1	reviewed	missense	c.2257	p.G753W	1.000	NULL	superfamily_p53-like transcription factors,HMMPfam_RHD,HMMSmart_SM00429,superfamily_E set domains,HMMPfam_TIG	-	no_errors
CPD	1362	genome.wustl.edu	36	17	25796910	25796910	+	Silent	SNP	C	C	A	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	17	25796910	25796910	C	A	SNP	CPD	NM_001304	human	genbank	54_36p	+1	reviewed	silent	c.2619	p.S873	0.402	HMMSmart_Zn_pept,superfamily_CarboxypepD_reg	superfamily_SSF53187,HMMSmart_Zn_pept,HMMPfam_Peptidase_M14,PatternScan_CARBOXYPEPT_ZN_1,PatternScan_CARBOXYPEPT_ZN_2,superfamily_CarboxypepD_reg	-	no_errors
BTN3A3	10384	genome.wustl.edu	36	6	26559894	26559894	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	6	26559894	26559894	T	C	SNP	BTN3A3	NM_006994	human	genbank	54_36p	+1	validated	missense	c.1031	p.L344P	0.999	HMMSmart_PRY	superfamily_SSF48726,HMMPfam_V-set,HMMSmart_IG,HMMSmart_PRY,HMMPfam_SPRY,HMMSmart_SPRY	-	no_errors
FLT3	2322	genome.wustl.edu	36	13	27509346	27509346	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	13	27509346	27509346	T	C	SNP	FLT3	NM_004119	human	genbank	54_36p	-1	reviewed	missense	c.1285	p.K429E	1.000	NULL	superfamily_SSF48726,HMMPfam_ig,superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_PROTEIN_KINASE_ATP,PatternScan_RECEPTOR_TYR_KIN_III,PatternScan_PROTEIN_KINASE_TYR	-	no_errors
AP1B1	162	genome.wustl.edu	36	22	28065018	28065018	+	Silent	SNP	G	A	A	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	22	28065018	28065018	G	A	SNP	AP1B1	NM_001127	human	genbank	54_36p	-1	reviewed	silent	c.2124	p.G708	0.611	NULL	superfamily_ARM repeat,HMMPfam_Adaptin_N,HMMSmart_SM00185,superfamily_Clathrin adaptor appendage domain,HMMSmart_SM00809,HMMPfam_Alpha_adaptinC2,superfamily_Subdomain of clathrin and coatomer appendage domain,HMMPfam_B2-adapt-app_C	-	no_errors
MICB	4277	genome.wustl.edu	36	6	31581465	31581465	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	6	31581465	31581465	C	T	SNP	MICB	NM_005931	human	genbank	54_36p	+1	reviewed	missense	c.163	p.P55S	0.000	superfamily_MHC antigen-recognition domain,HMMPfam_MHC_I	superfamily_MHC antigen-recognition domain,HMMPfam_MHC_I,superfamily_Immunoglobulin,HMMPfam_C1-set,HMMSmart_SM00407	-	no_errors
AK2P2	339736	genome.wustl.edu	36	2	31901777	31901777	+	RNA	SNP	A	A	C	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	2	31901777	31901777	A	C	SNP	AK2P2	XR_017211	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.996	-	-	-	pseudogene
LOC100128974	0	genome.wustl.edu	36	15	33378280	33378280	+	RNA	SNP	G	G	T	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	15	33378280	33378280	G	T	SNP	LOC100128974	XR_038065	human	genbank	54_36p	-1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
CPNE1	8904	genome.wustl.edu	36	20	33683318	33683318	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	20	33683318	33683318	T	A	SNP	CPNE1	NM_003915	human	genbank	54_36p	-1	reviewed	missense	c.500	p.Q167L	0.853	superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_C2	HMMSmart_C2,HMMPfam_C2,superfamily_C2_CaLB,superfamily_SSF53300,HMMSmart_VWA,HMMPfam_Copine	-	no_errors
DDX17	10521	genome.wustl.edu	36	22	37211928	37211928	+	Silent	SNP	T	C	C	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	22	37211928	37211928	T	C	SNP	DDX17	NM_001098504	human	genbank	54_36p	-1	reviewed	silent	c.2154	p.Q718	0.996	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_DEAD,PatternScan_DEAD_ATP_HELICASE,HMMSmart_SM00490,HMMPfam_Helicase_C	-	no_errors
LOC727860	727860	genome.wustl.edu	36	10	39019402	39019402	+	RNA	SNP	G	G	T	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	10	39019402	39019402	G	T	SNP	LOC727860	XR_037651	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.999	-	-	-	pseudogene
BRWD1	54014	genome.wustl.edu	36	21	39592253	39592253	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	21	39592253	39592253	C	G	SNP	BRWD1	NM_018963	human	genbank	54_36p	-1	reviewed	missense	c.324	p.R108S	1.000	NULL	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40,PatternScan_WD_REPEATS_1,HMMSmart_SM00297,superfamily_Bromodomain,HMMPfam_Bromodomain,PatternScan_BROMODOMAIN_1	-	no_errors
ANK1	286	genome.wustl.edu	36	8	41664883	41664883	+	Silent	SNP	C	C	T	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	8	41664883	41664883	C	T	SNP	ANK1	NM_020476	human	genbank	54_36p	-1	reviewed	silent	c.4206	p.Q1402	0.459	HMMSmart_SM00005,superfamily_DEATH domain	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank,HMMPfam_ZU5,HMMSmart_SM00218,HMMSmart_SM00005,superfamily_DEATH domain,HMMPfam_Death	-	no_errors
CATSPER2	117155	genome.wustl.edu	36	15	41726946	41726946	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	15	41726946	41726946	G	T	SNP	CATSPER2	NM_172095	human	genbank	54_36p	-1	reviewed	missense	c.157	p.Q53K	0.002	NULL	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	-	no_errors
TNFSF11	8600	genome.wustl.edu	36	13	42078995	42078995	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	13	42078995	42078995	C	G	SNP	TNFSF11	NM_003701	human	genbank	54_36p	+1	reviewed	missense	c.895	p.L299V	0.975	superfamily_TNF-like,HMMSmart_SM00207,HMMPfam_TNF	superfamily_TNF-like,HMMSmart_SM00207,HMMPfam_TNF	-	no_errors
ADAMTS20	80070	genome.wustl.edu	36	12	42112783	42112783	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	12	42112783	42112783	T	A	SNP	ADAMTS20	NM_025003	human	genbank	54_36p	-1	validated	missense	c.2819	p.Q940L	1.000	HMMSmart_SM00209,superfamily_TSP-1 type 1 repeat	"HMMPfam_Pep_M12B_propep,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Reprolysin,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMPfam_ADAM_spacer1,HMMPfam_GON"	-	no_errors
SPG11	80208	genome.wustl.edu	36	15	42687987	42687987	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	15	42687987	42687987	A	C	SNP	SPG11	NM_025137	human	genbank	54_36p	-1	reviewed	missense	c.3400	p.C1134G	0.971	NULL	PatternScan_GLYCOSYL_HYDROL_F1_1	-	no_errors
OPN5	221391	genome.wustl.edu	36	6	47862281	47862281	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	6	47862281	47862281	G	A	SNP	OPN5	NM_181744	human	genbank	54_36p	+1	reviewed	missense	c.202	p.A68T	1.000	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,PatternScan_OPSIN	-	no_errors
GDF2	2658	genome.wustl.edu	36	10	48033734	48033734	+	Silent	SNP	C	C	T	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	10	48033734	48033734	C	T	SNP	GDF2	NM_016204	human	genbank	54_36p	-1	reviewed	silent	c.1140	p.V380	1.000	superfamily_Cystine-knot cytokines,HMMPfam_TGF_beta,HMMSmart_SM00204	HMMPfam_TGFb_propeptide,superfamily_Cystine-knot cytokines,HMMPfam_TGF_beta,HMMSmart_SM00204,PatternScan_TGF_BETA_1	-	no_errors
CLCN5	1184	genome.wustl.edu	36	X	49738177	49738177	+	Silent	SNP	G	G	A	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	X	49738177	49738177	G	A	SNP	CLCN5	NM_000084	human	genbank	54_36p	+1	reviewed	silent	c.1257	p.P419	0.262	superfamily_Clc chloride channel,HMMPfam_Voltage_CLC	superfamily_Clc chloride channel,HMMPfam_Voltage_CLC,superfamily_CBS-domain,HMMSmart_SM00116,HMMPfam_CBS	-	no_errors
ACVRL1	94	genome.wustl.edu	36	12	50593228	50593228	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	12	50593228	50593228	G	A	SNP	ACVRL1	NM_000020	human	genbank	54_36p	+1	reviewed	missense	c.140	p.R47Q	1.000	HMMPfam_Activin_recp,superfamily_SSF57302	HMMPfam_Activin_recp,superfamily_SSF57302,HMMPfam_TGF_beta_GS,HMMSmart_GS,superfamily_Kinase_like,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors
KRT83	3889	genome.wustl.edu	36	12	50996989	50996989	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	12	50996989	50996989	A	G	SNP	KRT83	NM_002282	human	genbank	54_36p	-1	reviewed	missense	c.836	p.I279T	0.996	HMMPfam_Filament	HMMPfam_Filament,PatternScan_IF	-	no_errors
PNMAL2	0	genome.wustl.edu	36	19	51689646	51689646	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	19	51689646	51689646	G	A	SNP	PNMAL2	NM_020709	human	genbank	54_36p	-1	validated	missense	c.917	p.P306L	0.000	NULL	NULL	-	no_errors
PRKG1	5592	genome.wustl.edu	36	10	53718550	53718550	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	10	53718550	53718550	G	T	SNP	PRKG1	NM_006258	human	genbank	54_36p	+1	validated	missense	c.1768	p.D590Y	1.000	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase	superfamily_cAMP-binding domain-like,HMMSmart_SM00100,HMMPfam_cNMP_binding,PatternScan_CNMP_BINDING_1,PatternScan_CNMP_BINDING_2,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,HMMSmart_SM00133	-	no_errors
OR2AP1	0	genome.wustl.edu	36	12	54255152	54255152	+	Silent	SNP	C	C	G	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	12	54255152	54255152	C	G	SNP	OR2AP1	ENST00000321688	human	ensembl	54_36p	+1	known	silent	c.687	p.A229	0.002	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
PCDH15	65217	genome.wustl.edu	36	10	55614990	55614990	+	Silent	SNP	T	T	A	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	10	55614990	55614990	T	A	SNP	PCDH15	NM_033056	human	genbank	54_36p	-1	reviewed	silent	c.1350	p.S450	0.965	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like,HMMPfam_Cadherin	-	no_errors
NDRG4	65009	genome.wustl.edu	36	16	57095809	57095809	+	Silent	SNP	C	C	T	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	16	57095809	57095809	C	T	SNP	NDRG4	NM_020465	human	genbank	54_36p	+1	reviewed	silent	c.390	p.S130	0.649	superfamily_SSF53474,HMMPfam_Ndr	superfamily_SSF53474,HMMPfam_Ndr	-	no_errors
CACNG7	59284	genome.wustl.edu	36	19	59109578	59109578	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	19	59109578	59109578	G	A	SNP	CACNG7	NM_031896	human	genbank	54_36p	+1	reviewed	missense	c.209	p.G70D	1.000	HMMPfam_PMP22_Claudin	HMMPfam_PMP22_Claudin	-	no_errors
DIDO1	11083	genome.wustl.edu	36	20	60982554	60982554	+	Silent	SNP	G	G	A	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	20	60982554	60982554	G	A	SNP	DIDO1	NM_033081	human	genbank	54_36p	-1	reviewed	silent	c.5199	p.T1733	0.000	NULL	superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1,superfamily_Elongation factor TFIIS domain 2,HMMPfam_TFIIS_M,HMMSmart_SM00510,HMMPfam_SPOC	-	no_errors
KCNH5	27133	genome.wustl.edu	36	14	62316335	62316335	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	14	62316335	62316335	G	A	SNP	KCNH5	NM_139318	human	genbank	54_36p	-1	reviewed	missense	c.1883	p.A628V	1.000	superfamily_cAMP-binding domain-like,HMMSmart_SM00100,HMMPfam_cNMP_binding	superfamily_PYP-like sensor domain (PAS domain),HMMPfam_PAS,HMMSmart_SM00086,superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,superfamily_cAMP-binding domain-like,HMMSmart_SM00100,HMMPfam_cNMP_binding	-	no_errors
ZNF107	51427	genome.wustl.edu	36	7	63804678	63804678	+	Silent	SNP	C	C	T	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	7	63804678	63804678	C	T	SNP	ZNF107	NM_001013746	human	genbank	54_36p	+1	validated	silent	c.561	p.P187	0.019	superfamily_SSF57667	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
ROR1	4919	genome.wustl.edu	36	1	64416080	64416080	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	1	64416080	64416080	G	A	SNP	ROR1	NM_005012	human	genbank	54_36p	+1	validated	missense	c.1768	p.G590R	0.997	superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_Fz,superfamily_Kringle-like,HMMSmart_SM00130,HMMPfam_Kringle,PatternScan_KRINGLE_1,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_TYR	-	no_errors
HAS3	3038	genome.wustl.edu	36	16	67706282	67706282	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	16	67706282	67706282	C	T	SNP	HAS3	NM_005329	human	genbank	54_36p	+1	reviewed	missense	c.1274	p.T425I	1.000	NULL	superfamily_SSF53448,HMMPfam_Glycos_transf_2	-	no_errors
NFAT5	10725	genome.wustl.edu	36	16	68251166	68251166	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	16	68251166	68251166	C	G	SNP	NFAT5	NM_138713	human	genbank	54_36p	+1	reviewed	missense	c.1232	p.A411G	1.000	superfamily_p53-like transcription factors,HMMPfam_RHD	superfamily_p53-like transcription factors,HMMPfam_RHD,superfamily_E set domains,HMMSmart_SM00429,HMMPfam_TIG	-	no_errors
PCNX	22990	genome.wustl.edu	36	14	70583521	70583521	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	14	70583521	70583521	A	G	SNP	PCNX	NM_014982	human	genbank	54_36p	+1	validated	missense	c.4106	p.N1369S	1.000	NULL	HMMPfam_Pecanex_C	-	no_errors
ADD2	119	genome.wustl.edu	36	2	70787016	70787016	+	Silent	SNP	C	C	T	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	2	70787016	70787016	C	T	SNP	ADD2	NM_001617	human	genbank	54_36p	-1	reviewed	silent	c.33	p.S11	0.956	NULL	superfamily_AraD-like aldolase/epimerase,HMMPfam_Aldolase_II	-	no_errors
ABHD11	83451	genome.wustl.edu	36	7	72789945	72789945	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	7	72789945	72789945	G	C	SNP	ABHD11	NM_148912	human	genbank	54_36p	-1	reviewed	missense	c.345	p.S115R	1.000	superfamily_alpha/beta-Hydrolases,HMMPfam_Abhydrolase_1	superfamily_alpha/beta-Hydrolases,HMMPfam_Abhydrolase_1	-	no_errors
IDH3A	3419	genome.wustl.edu	36	15	76239509	76239509	+	Silent	SNP	G	G	A	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	15	76239509	76239509	G	A	SNP	IDH3A	NM_005530	human	genbank	54_36p	+1	reviewed	silent	c.195	p.E65	1.000	superfamily_Isocitrate/Isopropylmalate dehydrogenase-like,HMMPfam_Iso_dh	superfamily_Isocitrate/Isopropylmalate dehydrogenase-like,HMMPfam_Iso_dh,PatternScan_IDH_IMDH	-	no_errors
ADAMTS7	11173	genome.wustl.edu	36	15	76845774	76845774	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	15	76845774	76845774	C	A	SNP	ADAMTS7	NM_014272	human	genbank	54_36p	-1	reviewed	missense	c.3534	p.R1178S	0.000	NULL	"HMMPfam_Pep_M12B_propep,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Reprolysin,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMPfam_ADAM_spacer1"	-	no_errors
AP3B1	8546	genome.wustl.edu	36	5	77513090	77513090	+	Silent	SNP	A	A	C	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	5	77513090	77513090	A	C	SNP	AP3B1	NM_003664	human	genbank	54_36p	-1	reviewed	silent	c.939	p.A313	0.860	HMMPfam_Adaptin_N,superfamily_ARM repeat	HMMPfam_Adaptin_N,superfamily_ARM repeat	-	no_errors
SHROOM3	57619	genome.wustl.edu	36	4	77919152	77919152	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	4	77919152	77919152	C	T	SNP	SHROOM3	NM_020859	human	genbank	54_36p	+1	validated	missense	c.5786	p.T1929M	0.960	HMMPfam_ASD2	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,HMMPfam_ASD1,HMMPfam_ASD2	-	no_errors
HAPLN1	1404	genome.wustl.edu	36	5	82973171	82973171	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	5	82973171	82973171	C	A	SNP	HAPLN1	NM_001884	human	genbank	54_36p	-1	validated	missense	c.965	p.R322I	1.000	HMMSmart_SM00445,HMMPfam_Xlink,superfamily_C-type lectin-like,PatternScan_LINK_1	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMPfam_V-set,HMMSmart_SM00406,HMMSmart_SM00445,HMMPfam_Xlink,superfamily_C-type lectin-like,PatternScan_LINK_1	-	no_errors
LOC728979	728979	genome.wustl.edu	36	5	86216133	86216133	+	RNA	SNP	C	C	T	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	5	86216133	86216133	C	T	SNP	LOC728979	XR_015799	human	genbank	54_36p	-1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
GBP4	115361	genome.wustl.edu	36	1	89428406	89428406	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	1	89428406	89428406	A	G	SNP	GBP4	NM_052941	human	genbank	54_36p	-1	validated	missense	c.1100	p.L367P	1.000	HMMPfam_GBP_C,superfamily_GBP	superfamily_SSF52540,HMMPfam_GBP,HMMPfam_GBP_C,superfamily_GBP	-	no_errors
EEA1	8411	genome.wustl.edu	36	12	91771857	91771857	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	12	91771857	91771857	G	C	SNP	EEA1	NM_003566	human	genbank	54_36p	-1	validated	missense	c.371	p.A124G	0.165	NULL	HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_FYVE_PHD_ZnF,HMMSmart_FYVE,HMMPfam_FYVE	-	no_errors
TSGA10	80705	genome.wustl.edu	36	2	98981116	98981116	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	2	98981116	98981116	C	G	SNP	TSGA10	NM_025244	human	genbank	54_36p	-1	validated	missense	c.2073	p.E691D	1.000	NULL	NULL	-	no_errors
MUC17	140453	genome.wustl.edu	36	7	100467454	100467454	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	7	100467454	100467454	A	G	SNP	MUC17	NM_001040105	human	genbank	54_36p	+1	provisional	missense	c.6037	p.S2013G	0.370	NULL	superfamily_EGF/Laminin,PatternScan_EGF_1,superfamily_SEA domain,HMMSmart_SM00200,HMMPfam_SEA	-	no_errors
KDELC1	79070	genome.wustl.edu	36	13	102248936	102248936	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	13	102248936	102248936	G	A	SNP	KDELC1	NM_024089	human	genbank	54_36p	-1	reviewed	missense	c.86	p.P29L	0.985	HMMPfam_Filamin,superfamily_Ig_E-set,HMMSmart_IG_FLMN	HMMPfam_Filamin,superfamily_Ig_E-set,HMMSmart_IG_FLMN,HMMPfam_DUF821,HMMSmart_CAP10,PatternScan_ER_TARGET	-	no_errors
ACTL7A	10881	genome.wustl.edu	36	9	110664503	110664503	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	9	110664503	110664503	C	T	SNP	ACTL7A	NM_006687	human	genbank	54_36p	+1	reviewed	missense	c.80	p.A27V	0.038	NULL	HMMPfam_Actin,superfamily_Actin-like ATPase domain,HMMSmart_SM00268	-	no_errors
CDC16	8881	genome.wustl.edu	36	13	114048768	114048768	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	13	114048768	114048768	G	C	SNP	CDC16	NM_001078645	human	genbank	54_36p	+1	reviewed	missense	c.1554	p.M518I	1.000	superfamily_TPR-like	superfamily_TPR-like,HMMPfam_TPR_1,HMMSmart_SM00028	-	no_errors
SLC35F5	80255	genome.wustl.edu	36	2	114205691	114205691	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	2	114205691	114205691	C	T	SNP	SLC35F5	NM_025181	human	genbank	54_36p	-1	provisional	missense	c.925	p.G309R	1.000	superfamily_Multidrug resistance efflux transporter EmrE,HMMPfam_DUF6	superfamily_Multidrug resistance efflux transporter EmrE,HMMPfam_DUF6	-	no_errors
HIP1R	9026	genome.wustl.edu	36	12	121898579	121898579	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	12	121898579	121898579	G	T	SNP	HIP1R	NM_003959	human	genbank	54_36p	+1	validated	nonsense	c.142	p.E48*	1.000	HMMPfam_ANTH,superfamily_ENTH_VHS,HMMSmart_ENTH	HMMPfam_ANTH,superfamily_ENTH_VHS,HMMSmart_ENTH,superfamily_SSF109885,HMMSmart_ILWEQ,HMMPfam_I_LWEQ	-	no_errors
SETD8	387893	genome.wustl.edu	36	12	122458074	122458074	+	Silent	SNP	C	C	T	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	12	122458074	122458074	C	T	SNP	SETD8	NM_020382	human	genbank	54_36p	+1	validated	silent	c.930	p.H310	1.000	superfamily_SSF82199,HMMPfam_SET,HMMSmart_SET	superfamily_SSF82199,HMMPfam_SET,HMMSmart_SET	-	no_errors
SPAM1	6677	genome.wustl.edu	36	7	123381107	123381107	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	7	123381107	123381107	G	A	SNP	SPAM1	NM_003117	human	genbank	54_36p	+1	reviewed	missense	c.247	p.A83T	0.000	HMMPfam_Glyco_hydro_56,superfamily_Glyco_hydro_cat	HMMPfam_Glyco_hydro_56,superfamily_Glyco_hydro_cat	-	no_errors
VWA5A	4013	genome.wustl.edu	36	11	123499337	123499337	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	11	123499337	123499337	T	C	SNP	VWA5A	NM_014622	human	genbank	54_36p	+1	validated	missense	c.985	p.Y329H	1.000	superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA	HMMSmart_SM00609,HMMPfam_VIT,superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA	-	no_errors
DENND1A	57706	genome.wustl.edu	36	9	125184585	125184585	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	9	125184585	125184585	C	A	SNP	DENND1A	NM_020946	human	genbank	54_36p	-1	validated	missense	c.1977	p.K659N	0.983	NULL	HMMPfam_uDENN,HMMSmart_SM00800,HMMPfam_DENN,HMMSmart_SM00799,HMMPfam_dDENN,HMMSmart_SM00801	-	no_errors
MST4	51765	genome.wustl.edu	36	X	131016452	131016452	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	X	131016452	131016452	T	G	SNP	MST4	NM_016542	human	genbank	54_36p	+1	reviewed	missense	c.155	p.I52S	1.000	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP	-	no_errors
LOC401010	401010	genome.wustl.edu	36	2	131916906	131916906	+	RNA	SNP	G	G	A	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	2	131916906	131916906	G	A	SNP	LOC401010	NR_002826	human	genbank	54_36p	-1	validated	rna	NULL	NULL	0.459	-	-	-	pseudogene
SLC2A6	11182	genome.wustl.edu	36	9	135331267	135331267	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	9	135331267	135331267	C	G	SNP	SLC2A6	NM_017585	human	genbank	54_36p	-1	validated	missense	c.475	p.E159Q	1.000	superfamily_MFS_gen_substrate_transporter,HMMPfam_Sugar_tr,PatternScan_SUGAR_TRANSPORT_2	superfamily_MFS_gen_substrate_transporter,HMMPfam_Sugar_tr,PatternScan_SUGAR_TRANSPORT_2,PatternScan_SUGAR_TRANSPORT_1	-	no_errors
SARDH	1757	genome.wustl.edu	36	9	135588791	135588791	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	9	135588791	135588791	G	A	SNP	SARDH	NM_007101	human	genbank	54_36p	-1	reviewed	missense	c.326	p.T109M	0.997	superfamily_SSF51905,HMMPfam_DAO	superfamily_SSF51905,HMMPfam_DAO,superfamily_SSF54373,superfamily_SSF103025,HMMPfam_GCV_T,HMMPfam_GCV_T_C,superfamily_SSF101790	-	no_errors
UTRN	7402	genome.wustl.edu	36	6	144825498	144825498	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	6	144825498	144825498	C	G	SNP	UTRN	NM_007124	human	genbank	54_36p	+1	reviewed	missense	c.2869	p.L957V	1.000	superfamily_Spectrin,HMMSmart_SPEC	superfamily_Calponin-homology,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_CH,PatternScan_ACTININ_2,HMMPfam_Spectrin,superfamily_Spectrin,HMMSmart_SPEC,superfamily_WW_Rsp5_WWP,HMMSmart_WW,HMMPfam_WW,PatternScan_WW_DOMAIN_1,superfamily_SSF47473,HMMPfam_efhand_1,HMMPfam_efhand_2,HMMPfam_ZZ,HMMSmart_ZnF_ZZ,PatternScan_ZF_ZZ_1	-	no_errors
SMARCD3	6604	genome.wustl.edu	36	7	150568130	150568130	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	7	150568130	150568130	C	A	SNP	SMARCD3	NM_001003801	human	genbank	54_36p	-1	reviewed	splice_site	c.1173+1	e10+1	1.000	-	-	-	no_errors
SLC36A3	285641	genome.wustl.edu	36	5	150658354	150658354	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	5	150658354	150658354	C	T	SNP	SLC36A3	NM_181774	human	genbank	54_36p	-1	validated	missense	c.212	p.G71D	0.334	HMMPfam_Aa_trans	HMMPfam_Aa_trans	-	no_errors
OPN1LW	5956	genome.wustl.edu	36	X	153071668	153071668	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	X	153071668	153071668	G	C	SNP	OPN1LW	NM_020061	human	genbank	54_36p	+1	reviewed	missense	c.471	p.K157N	1.000	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,PatternScan_OPSIN	-	no_errors
CTAG2	30848	genome.wustl.edu	36	X	153534958	153534958	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	X	153534958	153534958	C	T	SNP	CTAG2	NM_020994	human	genbank	54_36p	-1	validated	missense	c.26	p.G9E	0.000	NULL	HMMPfam_Pcc1	-	no_errors
IPCEF1	26034	genome.wustl.edu	36	6	154530769	154530769	+	Missense_Mutation	SNP	C	A	A	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	6	154530769	154530769	C	A	SNP	IPCEF1	NM_015553	human	genbank	54_36p	-1	validated	missense	c.1079	p.R360L	1.000	NULL	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	-	no_errors
GPD2	2820	genome.wustl.edu	36	2	157060810	157060810	+	Silent	SNP	G	G	A	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	2	157060810	157060810	G	A	SNP	GPD2	NM_000408	human	genbank	54_36p	+1	validated	silent	c.111	p.L37	1.000	NULL	superfamily_FAD/NAD(P)-binding domain,HMMPfam_DAO,PatternScan_FAD_G3PDH_1,superfamily_FAD-linked reductases C-terminal domain,PatternScan_FAD_G3PDH_2,superfamily_EF-hand,HMMSmart_SM00054,HMMPfam_efhand,PatternScan_EF_HAND_1	-	no_errors
CTSO	1519	genome.wustl.edu	36	4	157083867	157083867	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	4	157083867	157083867	C	T	SNP	CTSO	NM_001334	human	genbank	54_36p	-1	reviewed	splice_site	c.136-1	e2-1	1.000	-	-	-	no_errors
UFC1	51506	genome.wustl.edu	36	1	159393684	159393684	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	1	159393684	159393684	T	G	SNP	UFC1	NM_016406	human	genbank	54_36p	+1	validated	missense	c.208	p.W70G	1.000	HMMPfam_UFC1	HMMPfam_UFC1	-	no_errors
TOR3A	64222	genome.wustl.edu	36	1	177329878	177329878	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	1	177329878	177329878	G	C	SNP	TOR3A	NM_022371	human	genbank	54_36p	+1	validated	missense	c.846	p.E282D	1.000	HMMPfam_Torsin,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_Torsin,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
TOR1AIP1	26092	genome.wustl.edu	36	1	178125079	178125079	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	1	178125079	178125079	G	T	SNP	TOR1AIP1	NM_015602	human	genbank	54_36p	+1	validated	missense	c.562	p.D188Y	0.251	HMMPfam_LAP1C	HMMPfam_LAP1C	-	no_errors
C1orf25	81627	genome.wustl.edu	36	1	183375852	183375852	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	1	183375852	183375852	C	A	SNP	C1orf25	NM_030934	human	genbank	54_36p	-1	reviewed	missense	c.985	p.V329L	0.005	superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_TRM	HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_TRM	-	no_errors
PLXNA2	5362	genome.wustl.edu	36	1	206282223	206282223	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	1	206282223	206282223	T	G	SNP	PLXNA2	NM_025179	human	genbank	54_36p	-1	reviewed	missense	c.4129	p.S1377R	1.000	HMMPfam_Plexin_cytopl,superfamily_GTPase activation domain GAP	superfamily_Sema domain,HMMPfam_Sema,HMMSmart_SM00630,HMMPfam_PSI,HMMSmart_SM00423,superfamily_Plexin repeat,HMMSmart_SM00429,superfamily_E set domains,HMMPfam_TIG,HMMPfam_Plexin_cytopl,superfamily_GTPase activation domain GAP	-	no_errors
MAP2	4133	genome.wustl.edu	36	2	210277460	210277460	+	Silent	SNP	A	A	T	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	2	210277460	210277460	A	T	SNP	MAP2	NM_001039538	human	genbank	54_36p	+1	reviewed	silent	c.558	p.T186	1.000	NULL	HMMPfam_RII_binding_1,HMMPfam_Tubulin-binding,PatternScan_TAU_MAP	-	no_errors
SERPINE2	5270	genome.wustl.edu	36	2	224574849	224574849	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	2	224574849	224574849	G	C	SNP	SERPINE2	NM_006216	human	genbank	54_36p	-1	validated	missense	c.13	p.L5V	0.306	NULL	HMMPfam_Serpin,superfamily_Serpins,HMMSmart_SM00093,PatternScan_SERPIN	-	no_errors
ARID4B	51742	genome.wustl.edu	36	1	233412331	233412331	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	1	233412331	233412331	C	G	SNP	ARID4B	NM_016374	human	genbank	54_36p	-1	reviewed	missense	c.2526	p.K842N	1.000	NULL	HMMSmart_SM00333,HMMPfam_RBB1NT,superfamily_ARID-like,HMMPfam_ARID,HMMSmart_SM00501	-	no_errors
EXO1	9156	genome.wustl.edu	36	1	240102143	240102143	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-59-2372-01A-01D-1526-09	TCGA-59-2372-10A-01D-1526-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	1d360c98-deb5-4338-a615-348fae76a970	6c8deb64-732f-434d-bf72-e537052c2d61	1	240102143	240102143	C	T	SNP	EXO1	NM_006027	human	genbank	54_36p	+1	reviewed	missense	c.1454	p.T485I	0.981	NULL	HMMPfam_XPG_N,HMMSmart_SM00485,superfamily_PIN domain-like,PatternScan_XPG_1,HMMSmart_SM00484,HMMPfam_XPG_I,PatternScan_XPG_2,superfamily_5' to 3' exonuclease C-terminal subdomain,HMMSmart_SM00279	-	no_errors
