Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error
ENSG00000210082	0	genome.wustl.edu	36	MT	2438	2438	+	RNA	SNP	G	A	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	MT	2438	2438	G	A	SNP	ENSG00000210082	ENST00000387347	human	ensembl	54_36p	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors
SNORD110	0	genome.wustl.edu	36	20	2582879	2582879	+	RNA	SNP	C	C	G	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	20	2582879	2582879	C	G	SNP	SNORD110	NR_003078	human	genbank	54_36p	+1	provisional	rna	NULL	NULL	0.000	-	-	-	no_errors
SRRM2	23524	genome.wustl.edu	36	16	2753843	2753843	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	16	2753843	2753843	G	T	SNP	SRRM2	NM_016333	human	genbank	54_36p	+1	validated	missense	c.3313	p.V1105F	0.001	NULL	HMMPfam_cwf21	-	no_errors
OR3A3	8392	genome.wustl.edu	36	17	3270889	3270889	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	17	3270889	3270889	G	A	SNP	OR3A3	NM_012373	human	genbank	54_36p	+1	provisional	missense	c.278	p.R93H	0.000	superfamily_SSF81321,HMMPfam_7tm_1	PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321,HMMPfam_7tm_1	-	no_errors
EPB41L3	23136	genome.wustl.edu	36	18	5405930	5405930	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	18	5405930	5405930	A	G	SNP	EPB41L3	NM_012307	human	genbank	54_36p	-1	provisional	missense	c.1954	p.Y652H	0.998	NULL	HMMSmart_SM00295,superfamily_Ubiquitin-like,HMMPfam_FERM_N,PatternScan_FERM_1,superfamily_Second domain of FERM,HMMPfam_FERM_M,PatternScan_FERM_2,superfamily_PH domain-like,HMMPfam_FERM_C,HMMPfam_FA,HMMPfam_SAB,HMMPfam_4_1_CTD	-	no_errors
FBXO18	84893	genome.wustl.edu	36	10	6009467	6009467	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	10	6009467	6009467	T	G	SNP	FBXO18	NM_032807	human	genbank	54_36p	+1	reviewed	missense	c.2939	p.L980R	1.000	superfamily_SSF52540	superfamily_SSF81383,HMMPfam_F-box,HMMSmart_FBOX,superfamily_SSF52540	-	no_errors
DCHS1	8642	genome.wustl.edu	36	11	6618160	6618160	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	11	6618160	6618160	T	G	SNP	DCHS1	NM_003737	human	genbank	54_36p	-1	reviewed	missense	c.1261	p.I421L	1.000	superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA	superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1	-	no_errors
LOC100132467	0	genome.wustl.edu	36	9	6660110	6660110	+	RNA	SNP	G	G	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	9	6660110	6660110	G	A	SNP	LOC100132467	XR_039339	human	genbank	54_36p	-1	model	rna	NULL	NULL	0.005	-	-	-	pseudogene
TP53	7157	genome.wustl.edu	36	17	7518272	7518272	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	17	7518272	7518272	C	T	SNP	TP53	NM_000546	human	genbank	54_36p	-1	reviewed	missense	c.734	p.G245D	1.000	HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors
SLC2A14	144195	genome.wustl.edu	36	12	7858362	7858362	+	Silent	SNP	G	G	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	12	7858362	7858362	G	A	SNP	SLC2A14	NM_153449	human	genbank	54_36p	-1	provisional	silent	c.1380	p.T460	0.011	superfamily_MFS general substrate transporter,HMMPfam_Sugar_tr	superfamily_MFS general substrate transporter,HMMPfam_Sugar_tr,PatternScan_SUGAR_TRANSPORT_2,PatternScan_SUGAR_TRANSPORT_1	-	no_errors
NLRP10	338322	genome.wustl.edu	36	11	7938119	7938119	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	11	7938119	7938119	G	T	SNP	NLRP10	NM_176821	human	genbank	54_36p	-1	reviewed	missense	c.1616	p.P539H	0.143	NULL	superfamily_DEATH_like,HMMPfam_PAAD_DAPIN,superfamily_SSF52540,HMMPfam_NACHT	-	no_errors
PLCB1	23236	genome.wustl.edu	36	20	8637385	8637385	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	20	8637385	8637385	G	C	SNP	PLCB1	NM_015192	human	genbank	54_36p	+1	reviewed	missense	c.1236	p.E412D	1.000	HMMSmart_SM00148,HMMPfam_PI-PLC-X,superfamily_PLC-like phosphodiesterases	superfamily_EF-hand,HMMPfam_efhand_like,HMMSmart_SM00148,HMMPfam_PI-PLC-X,superfamily_PLC-like phosphodiesterases,HMMPfam_PI-PLC-Y,HMMSmart_SM00149,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2,HMMPfam_PLC-beta_C	-	no_errors
ZNF121	7675	genome.wustl.edu	36	19	9538386	9538386	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	19	9538386	9538386	C	G	SNP	ZNF121	NM_001008727	human	genbank	54_36p	-1	validated	missense	c.403	p.V135L	0.000	superfamily_SSF57667	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
SCO1	6341	genome.wustl.edu	36	17	10536978	10536978	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	17	10536978	10536978	G	C	SNP	SCO1	NM_004589	human	genbank	54_36p	-1	reviewed	missense	c.390	p.H130Q	0.005	superfamily_Thiordxn-like_fd	superfamily_Thiordxn-like_fd,HMMPfam_SCO1-SenC	-	no_errors
ZNF491	126069	genome.wustl.edu	36	19	11778874	11778874	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	19	11778874	11778874	C	G	SNP	ZNF491	NM_152356	human	genbank	54_36p	+1	validated	missense	c.1106	p.S369C	0.000	superfamily_SSF57667,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	superfamily_SSF57667,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2	-	no_errors
ZNF799	90576	genome.wustl.edu	36	19	12362999	12362999	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	19	12362999	12362999	G	A	SNP	ZNF799	NM_001080821	human	genbank	54_36p	-1	validated	missense	c.1213	p.P405S	0.000	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
EGFL6	25975	genome.wustl.edu	36	X	13545776	13545776	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	X	13545776	13545776	C	G	SNP	EGFL6	NM_015507	human	genbank	54_36p	+1	reviewed	missense	c.785	p.P262R	1.000	NULL	superfamily_Growth factor receptor domain,HMMSmart_SM00181,HMMPfam_EGF_2,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_SM00179,PatternScan_ASX_HYDROXYL,superfamily_EGF/Laminin,HMMSmart_SM00137,HMMPfam_MAM	-	no_errors
MACROD2	140733	genome.wustl.edu	36	20	15896271	15896271	+	Silent	SNP	C	C	G	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	20	15896271	15896271	C	G	SNP	MACROD2	NM_080676	human	genbank	54_36p	+1	validated	silent	c.981	p.P327	0.000	NULL	superfamily_SSF52949,HMMSmart_A1pp,HMMPfam_Macro	-	no_errors
MAP3K15	389840	genome.wustl.edu	36	X	19320095	19320095	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	X	19320095	19320095	A	T	SNP	MAP3K15	NM_001001671	human	genbank	54_36p	-1	validated	missense	c.802	p.F268I	1.000	HMMSmart_S_TKc,HMMPfam_Pkinase,superfamily_Kinase_like	HMMSmart_S_TKc,HMMPfam_Pkinase,superfamily_Kinase_like,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,superfamily_SAM_homology	-	no_errors
IGLV10-54	0	genome.wustl.edu	36	22	20899547	20899547	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	22	20899547	20899547	A	C	SNP	IGLV10-54	ENST00000390287	human	ensembl	54_36p	+1	known	missense	c.239	p.E80A	0.001	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00406	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00406	-	no_stop_codon:bad_bp_length_for_coding_region
KRT18P40	390904	genome.wustl.edu	36	19	20936163	20936163	+	RNA	SNP	G	G	C	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	19	20936163	20936163	G	C	SNP	KRT18P40	XR_017288	human	genbank	54_36p	+1	model	rna	NULL	NULL	0.704	-	-	-	pseudogene
EIF4G3	8672	genome.wustl.edu	36	1	21092665	21092665	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	1	21092665	21092665	G	A	SNP	EIF4G3	NM_003760	human	genbank	54_36p	-1	validated	nonsense	c.2017	p.R673*	1.000	NULL	superfamily_ARM repeat,HMMPfam_MIF4G,HMMSmart_SM00543,HMMPfam_MA3,HMMSmart_SM00544,superfamily_PH domain-like,HMMSmart_SM00515,HMMPfam_W2	-	no_errors
USP48	84196	genome.wustl.edu	36	1	21956748	21956748	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	1	21956748	21956748	T	C	SNP	USP48	NM_032236	human	genbank	54_36p	-1	reviewed	missense	c.250	p.K84E	1.000	superfamily_Cysteine proteinases	superfamily_Cysteine proteinases,HMMPfam_UCH,PatternScan_UCH_2_2,superfamily_Ubiquitin-like	-	no_errors
CNR2	1269	genome.wustl.edu	36	1	24074470	24074470	+	Silent	SNP	G	G	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	1	24074470	24074470	G	A	SNP	CNR2	NM_001841	human	genbank	54_36p	-1	reviewed	silent	c.225	p.S75	1.000	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
CACNG3	10368	genome.wustl.edu	36	16	24280566	24280566	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	16	24280566	24280566	G	C	SNP	CACNG3	NM_006539	human	genbank	54_36p	+1	reviewed	missense	c.829	p.G277R	1.000	NULL	HMMPfam_PMP22_Claudin	-	no_errors
DSG3	1830	genome.wustl.edu	36	18	27300616	27300616	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	18	27300616	27300616	G	A	SNP	DSG3	NM_001944	human	genbank	54_36p	+1	reviewed	missense	c.1537	p.A513T	0.001	superfamily_Cadherin	HMMPfam_Cadherin,HMMSmart_CA,superfamily_Cadherin,PatternScan_CADHERIN_1	-	no_errors
DSG3	1830	genome.wustl.edu	36	18	27306244	27306244	+	Splice_Site	SNP	G	G	C	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	18	27306244	27306244	G	C	SNP	DSG3	NM_001944	human	genbank	54_36p	+1	reviewed	splice_site	c.1898-1	e13-1	0.998	-	-	-	no_errors
C8orf80	389643	genome.wustl.edu	36	8	27954512	27954512	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	8	27954512	27954512	C	T	SNP	C8orf80	NM_001010906	human	genbank	54_36p	-1	predicted	missense	c.1586	p.R529H	0.775	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
OR5V1	81696	genome.wustl.edu	36	6	29431128	29431128	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	6	29431128	29431128	G	A	SNP	OR5V1	NM_030876	human	genbank	54_36p	-1	validated	missense	c.824	p.S275L	0.001	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
OR11A1	26531	genome.wustl.edu	36	6	29503321	29503321	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	6	29503321	29503321	T	C	SNP	OR11A1	NM_013937	human	genbank	54_36p	-1	provisional	missense	c.77	p.H26R	0.939	superfamily_Family A G protein-coupled receptor-like	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
ADAMTS12	81792	genome.wustl.edu	36	5	33612657	33612657	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	5	33612657	33612657	G	C	SNP	ADAMTS12	NM_030955	human	genbank	54_36p	-1	reviewed	missense	c.3231	p.S1077R	0.001	NULL	"HMMPfam_Pep_M12B_propep,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Reprolysin,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMPfam_ADAM_spacer1"	-	no_errors
CTNNBL1	56259	genome.wustl.edu	36	20	35864712	35864712	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	20	35864712	35864712	T	A	SNP	CTNNBL1	NM_030877	human	genbank	54_36p	+1	reviewed	missense	c.1061	p.L354Q	1.000	superfamily_ARM repeat	HMMPfam_DUF1716,superfamily_ARM repeat	-	no_errors
KRT27	342574	genome.wustl.edu	36	17	36187372	36187372	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	17	36187372	36187372	A	G	SNP	KRT27	NM_181537	human	genbank	54_36p	-1	validated	missense	c.1111	p.Y371H	1.000	HMMPfam_Filament	HMMPfam_Filament	-	no_errors
FAM47C	442444	genome.wustl.edu	36	X	36937157	36937157	+	Silent	SNP	C	C	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	X	36937157	36937157	C	A	SNP	FAM47C	NM_001013736	human	genbank	54_36p	+1	provisional	silent	c.753	p.P251	0.002	NULL	NULL	-	no_errors
USP9X	8239	genome.wustl.edu	36	X	40875677	40875677	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	X	40875677	40875677	T	G	SNP	USP9X	NM_001039590	human	genbank	54_36p	+1	reviewed	missense	c.266	p.L89W	1.000	NULL	superfamily_Cysteine proteinases,HMMPfam_UCH,PatternScan_UCH_2_1,PatternScan_UCH_2_2	-	no_errors
HIVEP3	59269	genome.wustl.edu	36	1	41820379	41820379	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	1	41820379	41820379	G	C	SNP	HIVEP3	NM_024503	human	genbank	54_36p	-1	validated	missense	c.2677	p.L893V	0.994	NULL	PatternScan_AIPM_HOMOCIT_SYNTH_1,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,superfamily_C2H2 and C2HC zinc fingers	-	no_errors
MYST3	7994	genome.wustl.edu	36	8	41910634	41910634	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	8	41910634	41910634	C	G	SNP	MYST3	NM_001099412	human	genbank	54_36p	-1	validated	missense	c.4261	p.D1421H	1.000	NULL	HMMSmart_H15,superfamily_SSF46785,HMMSmart_PHD,HMMPfam_PHD,HMMSmart_RING,PatternScan_ZF_PHD_1,superfamily_FYVE_PHD_ZnF,superfamily_Acyl_CoA_acyltransferase,HMMPfam_MOZ_SAS	-	no_errors
C1orf84	149469	genome.wustl.edu	36	1	43660824	43660824	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	1	43660824	43660824	C	G	SNP	C1orf84	ENST00000406439	human	ensembl	54_36p	+1	known	missense	c.1856	p.S619C	1.000	NULL	NULL	-	no_errors
ACTN4	81	genome.wustl.edu	36	19	43892770	43892770	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	19	43892770	43892770	C	A	SNP	ACTN4	NM_004924	human	genbank	54_36p	+1	reviewed	missense	c.767	p.A256D	1.000	superfamily_Calponin-homology,HMMPfam_CH,HMMSmart_CH	superfamily_Calponin-homology,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_CH,PatternScan_ACTININ_2,superfamily_Spectrin,HMMPfam_Spectrin,HMMSmart_SPEC,superfamily_SSF47473,HMMSmart_EFh,HMMPfam_efhand,PatternScan_EF_HAND_1,HMMPfam_efhand_Ca_insen	-	no_errors
ITGA3	3675	genome.wustl.edu	36	17	45508692	45508692	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	17	45508692	45508692	A	C	SNP	ITGA3	NM_005501	human	genbank	54_36p	+1	reviewed	missense	c.1678	p.N560H	0.999	HMMPfam_Integrin_alpha2,superfamily_Integrin domains	superfamily_Integrin alpha N-terminal domain,HMMSmart_SM00191,HMMPfam_FG-GAP,HMMPfam_Integrin_alpha2,superfamily_Integrin domains	-	no_errors
MYO5B	4645	genome.wustl.edu	36	18	45820580	45820580	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	18	45820580	45820580	G	A	SNP	MYO5B	NM_001080467	human	genbank	54_36p	-1	provisional	missense	c.241	p.H81Y	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head,HMMSmart_SM00015,HMMPfam_IQ,HMMPfam_DIL	-	no_errors
CXXC1	30827	genome.wustl.edu	36	18	46064140	46064140	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	18	46064140	46064140	C	A	SNP	CXXC1	NM_001101654	human	genbank	54_36p	-1	validated	missense	c.1469	p.C490F	1.000	NULL	superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1,HMMPfam_zf-CXXC	-	no_errors
PRKAR2A	5576	genome.wustl.edu	36	3	48803040	48803040	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	3	48803040	48803040	G	A	SNP	PRKAR2A	NM_004157	human	genbank	54_36p	-1	reviewed	nonsense	c.376	p.Q126*	1.000	superfamily_cNMP_binding	superfamily_cAMP-dep_prot_kin_reg_I/II_a/b,HMMPfam_RIIa,HMMSmart_RIIa,superfamily_cNMP_binding,HMMSmart_cNMP,HMMPfam_cNMP_binding,PatternScan_CNMP_BINDING_1,PatternScan_CNMP_BINDING_2	-	no_errors
FSHR	2492	genome.wustl.edu	36	2	49098204	49098204	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	2	49098204	49098204	C	G	SNP	FSHR	NM_000145	human	genbank	54_36p	-1	reviewed	missense	c.302	p.R101T	1.000	superfamily_L domain-like	superfamily_L domain-like,HMMPfam_LRRNT,HMMSmart_SM00013,HMMPfam_LRR_1,superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
DGKK	139189	genome.wustl.edu	36	X	50160849	50160849	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	X	50160849	50160849	G	C	SNP	DGKK	ENST00000376025	human	ensembl	54_36p	-1	known	missense	c.1337	p.S446C	0.992	superfamily_Cysteine-rich domain,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_Cysteine-rich domain,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,HMMPfam_DAGK_cat,HMMSmart_SM00046,HMMPfam_DAGK_acc,HMMSmart_SM00045	-	no_errors
ENSG00000213861	0	genome.wustl.edu	36	19	55254964	55254964	+	Silent	SNP	C	C	T	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	19	55254964	55254964	C	T	SNP	ENSG00000213861	ENST00000396607	human	ensembl	54_36p	-1	known	silent	c.387	p.G129	0.957	superfamily_SSF57667	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_start_codon
OR8H3	390152	genome.wustl.edu	36	11	55647031	55647031	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	11	55647031	55647031	G	A	SNP	OR8H3	NM_001005201	human	genbank	54_36p	+1	provisional	missense	c.607	p.A203T	0.185	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
RP1	6101	genome.wustl.edu	36	8	55700568	55700568	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	8	55700568	55700568	C	G	SNP	RP1	ENST00000220676	human	ensembl	54_36p	+1	known	missense	c.1573	p.Q525E	0.000	NULL	superfamily_SSF89837,HMMSmart_DCX,HMMPfam_DCX	-	no_errors
B4GALNT1	2583	genome.wustl.edu	36	12	56308287	56308287	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	12	56308287	56308287	G	A	SNP	B4GALNT1	NM_001478	human	genbank	54_36p	-1	reviewed	missense	c.1028	p.A343V	1.000	superfamily_SSF53448,HMMPfam_Glycos_transf_2	superfamily_SSF53448,HMMPfam_Glycos_transf_2	-	no_errors
PRKCG	5582	genome.wustl.edu	36	19	59099808	59099808	+	Silent	SNP	G	G	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	19	59099808	59099808	G	A	SNP	PRKCG	NM_002739	human	genbank	54_36p	+1	reviewed	silent	c.1764	p.G588	1.000	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase	superfamily_SSF57889,HMMSmart_C1,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_C2,superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,HMMSmart_S_TK_X,HMMPfam_Pkinase_C	-	no_errors
NLRP4	147945	genome.wustl.edu	36	19	61061734	61061734	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	19	61061734	61061734	C	T	SNP	NLRP4	NM_134444	human	genbank	54_36p	+1	validated	missense	c.1163	p.P388L	0.002	NULL	superfamily_DEATH domain,HMMPfam_PAAD_DAPIN,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_NACHT,superfamily_RNI-like,HMMSmart_SM00368	-	no_errors
ZSCAN5A	79149	genome.wustl.edu	36	19	61425891	61425891	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	19	61425891	61425891	T	A	SNP	ZSCAN5A	NM_024303	human	genbank	54_36p	-1	provisional	missense	c.620	p.D207V	0.000	NULL	HMMPfam_SCAN,HMMSmart_SCAN,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors
SNX1	6642	genome.wustl.edu	36	15	62215592	62215592	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	15	62215592	62215592	G	A	SNP	SNX1	NM_003099	human	genbank	54_36p	+1	reviewed	missense	c.1376	p.R459Q	0.961	HMMPfam_Vps5	HMMPfam_Sorting_nexin,superfamily_PX domain,HMMPfam_PX,HMMSmart_SM00312,HMMPfam_Vps5	-	no_errors
DIS3L	115752	genome.wustl.edu	36	15	64402210	64402210	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	15	64402210	64402210	T	A	SNP	DIS3L	NM_133375	human	genbank	54_36p	+1	validated	missense	c.1209	p.D403E	0.997	HMMPfam_RNB	HMMPfam_RNB,PatternScan_RIBONUCLEASE_II	-	no_errors
ESRP2	80004	genome.wustl.edu	36	16	66823362	66823362	+	Silent	SNP	C	C	G	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	16	66823362	66823362	C	G	SNP	ESRP2	NM_024939	human	genbank	54_36p	-1	validated	silent	c.1143	p.L381	1.000	HMMSmart_RRM,superfamily_SSF54928	superfamily_SSF54928,HMMSmart_RRM,HMMPfam_RRM_1	-	no_errors
GPR142	350383	genome.wustl.edu	36	17	69877293	69877293	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	17	69877293	69877293	G	A	SNP	GPR142	NM_181790	human	genbank	54_36p	+1	provisional	missense	c.335	p.R112Q	0.000	NULL	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
MAP3K9	4293	genome.wustl.edu	36	14	70337290	70337290	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	14	70337290	70337290	C	T	SNP	MAP3K9	NM_033141	human	genbank	54_36p	-1	validated	missense	c.667	p.A223T	1.000	superfamily_Kinase_like,HMMSmart_TyrKc,HMMPfam_Pkinase	superfamily_SH3,HMMPfam_SH3_1,HMMSmart_SH3,superfamily_Kinase_like,HMMSmart_TyrKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors
ACRC	93953	genome.wustl.edu	36	X	70740710	70740710	+	Silent	SNP	C	C	T	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	X	70740710	70740710	C	T	SNP	ACRC	NM_052957	human	genbank	54_36p	+1	validated	silent	c.858	p.D286	0.003	NULL	HMMPfam_SprT-like,HMMSmart_SM00731	-	no_errors
LLGL2	3993	genome.wustl.edu	36	17	71081261	71081261	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	17	71081261	71081261	C	T	SNP	LLGL2	NM_001031803	human	genbank	54_36p	+1	reviewed	missense	c.2830	p.R944C	0.002	NULL	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_LLGL,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors
MUC7	4589	genome.wustl.edu	36	4	71381221	71381221	+	Silent	SNP	G	G	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	4	71381221	71381221	G	A	SNP	MUC7	NM_152291	human	genbank	54_36p	+1	reviewed	silent	c.171	p.P57	0.000	NULL	NULL	-	no_errors
CLEC18B	0	genome.wustl.edu	36	16	73002259	73002259	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	16	73002259	73002259	T	C	SNP	CLEC18B	ENST00000268492	human	ensembl	54_36p	-1	known	missense	c.17	p.D6G	0.000	NULL	HMMPfam_Lectin_C,superfamily_C-type lectin-like,PatternScan_C_TYPE_LECTIN_1	-	no_start_codon
TRPA1	8989	genome.wustl.edu	36	8	73097894	73097894	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	8	73097894	73097894	A	G	SNP	TRPA1	NM_007332	human	genbank	54_36p	-1	reviewed	missense	c.3161	p.L1054P	0.910	NULL	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank,PatternScan_EF_HAND_1,HMMPfam_Ion_trans	-	no_errors
P4HA3	283208	genome.wustl.edu	36	11	73686959	73686959	+	Silent	SNP	C	C	T	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	11	73686959	73686959	C	T	SNP	P4HA3	NM_182904	human	genbank	54_36p	-1	reviewed	silent	c.663	p.E221	1.000	superfamily_TPR-like	HMMPfam_P4Ha_N,superfamily_TPR-like,HMMSmart_SM00702,HMMPfam_2OG-FeII_Oxy	-	no_errors
KIAA2022	340533	genome.wustl.edu	36	X	73876886	73876886	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	X	73876886	73876886	C	G	SNP	KIAA2022	NM_001008537	human	genbank	54_36p	-1	validated	missense	c.4231	p.G1411R	0.979	NULL	NULL	-	no_errors
CD109	135228	genome.wustl.edu	36	6	74574677	74574677	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	6	74574677	74574677	A	G	SNP	CD109	NM_133493	human	genbank	54_36p	+1	validated	missense	c.3340	p.R1114G	0.996	superfamily_Terpenoid cyclases/Protein prenyltransferases,HMMPfam_A2M_comp	HMMPfam_A2M_N,HMMPfam_A2M_N_2,HMMPfam_A2M,superfamily_Terpenoid cyclases/Protein prenyltransferases,HMMPfam_Thiol-ester_cl,PatternScan_ALPHA_2_MACROGLOBULIN,HMMPfam_A2M_comp,superfamily_Alpha-macroglobulin receptor domain,HMMPfam_A2M_recep	-	no_errors
CRISPLD1	83690	genome.wustl.edu	36	8	76104182	76104182	+	Silent	SNP	C	C	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	8	76104182	76104182	C	A	SNP	CRISPLD1	NM_031461	human	genbank	54_36p	+1	validated	silent	c.1326	p.S442	0.997	superfamily_LCCL domain,HMMSmart_SM00603,HMMPfam_LCCL	superfamily_PR-1-like,HMMSmart_SM00198,HMMPfam_SCP,PatternScan_CRISP_2,superfamily_LCCL domain,HMMSmart_SM00603,HMMPfam_LCCL	-	no_errors
LRRIQ1	84125	genome.wustl.edu	36	12	83962640	83962640	+	Silent	SNP	A	A	G	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	12	83962640	83962640	A	G	SNP	LRRIQ1	NM_001079910	human	genbank	54_36p	+1	validated	silent	c.258	p.G86	0.020	NULL	superfamily_RNI-like,HMMSmart_SM00015,HMMPfam_LRR_1,HMMSmart_SM00369,HMMPfam_IQ,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors
SNAP91	9892	genome.wustl.edu	36	6	84327371	84327371	+	Silent	SNP	A	A	T	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	6	84327371	84327371	A	T	SNP	SNAP91	NM_014841	human	genbank	54_36p	-1	validated	silent	c.2457	p.P819	1.000	NULL	superfamily_ENTH/VHS domain,HMMPfam_ANTH,HMMSmart_SM00273,superfamily_GAT-like domain	-	no_errors
NTRK2	4915	genome.wustl.edu	36	9	86532398	86532398	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	9	86532398	86532398	C	T	SNP	NTRK2	NM_006180	human	genbank	54_36p	+1	reviewed	missense	c.863	p.T288I	0.993	superfamily_SSF48726	superfamily_SSF52058,HMMPfam_LRRNT,HMMSmart_LRRNT,HMMPfam_LRR_1,HMMSmart_LRRCT,HMMPfam_I-set,superfamily_SSF48726,HMMSmart_IGc2,superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR,PatternScan_RECEPTOR_TYR_KIN_II	-	no_errors
ATP6V0D2	245972	genome.wustl.edu	36	8	87231528	87231528	+	Silent	SNP	A	A	G	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	8	87231528	87231528	A	G	SNP	ATP6V0D2	NM_152565	human	genbank	54_36p	+1	validated	silent	c.711	p.R237	1.000	superfamily_ATPase_V0/A0_c/d,HMMPfam_vATP-synt_AC39	superfamily_ATPase_V0/A0_c/d,HMMPfam_vATP-synt_AC39	-	no_errors
MESP2	145873	genome.wustl.edu	36	15	88121123	88121123	+	Silent	SNP	G	A	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	15	88121123	88121123	G	A	SNP	MESP2	NM_001039958	human	genbank	54_36p	+1	reviewed	silent	c.531	p.A177	0.865	NULL	superfamily_HLH helix-loop-helix DNA-binding domain,HMMPfam_HLH,HMMSmart_SM00353	-	no_errors
RNGTT	8732	genome.wustl.edu	36	6	89610806	89610806	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	6	89610806	89610806	T	G	SNP	RNGTT	NM_003800	human	genbank	54_36p	-1	validated	missense	c.1258	p.T420P	0.999	superfamily_DNA ligase/mRNA capping enzyme catalytic domain,HMMPfam_mRNA_cap_enzyme	superfamily_(Phosphotyrosine protein) phosphatases II,HMMPfam_DSPc,PatternScan_TYR_PHOSPHATASE_1,superfamily_DNA ligase/mRNA capping enzyme catalytic domain,HMMPfam_mRNA_cap_enzyme,HMMPfam_mRNA_cap_C,superfamily_Nucleic acid-binding proteins	-	no_errors
SV2B	9899	genome.wustl.edu	36	15	89612790	89612790	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	15	89612790	89612790	T	C	SNP	SV2B	NM_014848	human	genbank	54_36p	+1	validated	missense	c.1324	p.F442L	1.000	superfamily_MFS_gen_substrate_transporter,HMMPfam_MFS_1	superfamily_MFS_gen_substrate_transporter,HMMPfam_MFS_1	-	no_errors
LOC100133304	0	genome.wustl.edu	36	9	91210331	91210331	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	9	91210331	91210331	C	G	SNP	LOC100133304	XM_001716330	human	genbank	54_36p	-1	model	missense	c.385	p.D129H	0.000	NULL	NULL	-	no_errors
COL1A2	1278	genome.wustl.edu	36	7	93885780	93885780	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	7	93885780	93885780	C	A	SNP	COL1A2	NM_000089	human	genbank	54_36p	+1	reviewed	missense	c.2005	p.P669T	0.027	HMMPfam_Collagen	HMMPfam_Collagen,HMMSmart_SM00038,HMMPfam_COLFI	-	no_errors
RPA4	29935	genome.wustl.edu	36	X	96026213	96026213	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	X	96026213	96026213	C	T	SNP	RPA4	NM_013347	human	genbank	54_36p	+1	reviewed	missense	c.248	p.A83V	0.000	superfamily_Nucleic_acid_OB,HMMPfam_tRNA_anti	superfamily_Nucleic_acid_OB,HMMPfam_tRNA_anti,HMMPfam_RPA_C,superfamily_SSF46785	-	no_errors
AGL	178	genome.wustl.edu	36	1	100119322	100119322	+	Splice_Site	SNP	G	G	C	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	1	100119322	100119322	G	C	SNP	AGL	NM_000028	human	genbank	54_36p	+1	validated	splice_site	c.2001+1	e14+1	1.000	-	-	-	no_errors
DYNC1H1	1778	genome.wustl.edu	36	14	101569173	101569173	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	14	101569173	101569173	G	C	SNP	DYNC1H1	NM_001376	human	genbank	54_36p	+1	reviewed	missense	c.10098	p.K3366N	1.000	NULL	HMMPfam_DHC_N1,HMMPfam_DHC_N2,superfamily_SSF52540,HMMSmart_AAA,HMMPfam_AAA_5,HMMPfam_Dynein_heavy	-	no_errors
DYNC2H1	79659	genome.wustl.edu	36	11	102659003	102659003	+	Silent	SNP	C	C	T	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	11	102659003	102659003	C	T	SNP	DYNC2H1	NM_001080463	human	genbank	54_36p	+1	provisional	silent	c.10890	p.S3630	0.998	HMMPfam_Dynein_heavy	HMMPfam_DHC_N1,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA_5,HMMPfam_Dynein_heavy	-	no_errors
COL11A1	1301	genome.wustl.edu	36	1	103117852	103117852	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	1	103117852	103117852	A	C	SNP	COL11A1	NM_080629	human	genbank	54_36p	-1	reviewed	missense	c.5285	p.I1762S	1.000	HMMSmart_COLFI,HMMPfam_COLFI	HMMSmart_TSPN,superfamily_ConA_like_lec_gl,HMMSmart_LamG,HMMPfam_Laminin_G_2,HMMPfam_Collagen,HMMSmart_COLFI,HMMPfam_COLFI	-	no_errors
UBR5	51366	genome.wustl.edu	36	8	103367988	103367988	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	8	103367988	103367988	T	C	SNP	UBR5	NM_015902	human	genbank	54_36p	-1	reviewed	missense	c.4991	p.D1664G	1.000	NULL	HMMPfam_zf-UBR,HMMSmart_ZnF_UBR1,superfamily_HECT,superfamily_PABP_HYD,HMMPfam_PABP,HMMSmart_PolyA,HMMSmart_HECTc,HMMPfam_HECT	-	no_errors
NHEDC1	150159	genome.wustl.edu	36	4	104087388	104087388	+	Silent	SNP	T	T	C	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	4	104087388	104087388	T	C	SNP	NHEDC1	NM_139173	human	genbank	54_36p	-1	reviewed	silent	c.390	p.L130	1.000	HMMPfam_Na_H_Exchanger	HMMPfam_Na_H_Exchanger	-	no_errors
TEX13A	56157	genome.wustl.edu	36	X	104351379	104351379	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	X	104351379	104351379	G	A	SNP	TEX13A	ENST00000255513	human	ensembl	54_36p	-1	known	missense	c.359	p.T120M	0.000	NULL	superfamily_Znf265 first zinc-finger domain,HMMPfam_zf-RanBP,PatternScan_ZF_RANBP2_1	-	no_errors
TEX13A	56157	genome.wustl.edu	36	X	104351449	104351449	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	X	104351449	104351449	C	T	SNP	TEX13A	ENST00000255513	human	ensembl	54_36p	-1	known	missense	c.289	p.A97T	0.035	NULL	HMMPfam_zf-RanBP,PatternScan_ZF_RANBP2_1,superfamily_Znf265 first zinc-finger domain	-	no_errors
LAMB1	3912	genome.wustl.edu	36	7	107413710	107413710	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	7	107413710	107413710	C	A	SNP	LAMB1	NM_002291	human	genbank	54_36p	-1	reviewed	missense	c.669	p.R223S	1.000	HMMSmart_SM00136,HMMPfam_Laminin_N	HMMSmart_SM00136,HMMPfam_Laminin_N,HMMPfam_Laminin_EGF,HMMSmart_SM00180,superfamily_EGF/Laminin,PatternScan_EGF_1,PatternScan_EGF_LAM_1,HMMSmart_SM00181,PatternScan_EGF_2,superfamily_Prefoldin	-	no_errors
COL4A5	1287	genome.wustl.edu	36	X	107810834	107810834	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	X	107810834	107810834	G	C	SNP	COL4A5	NM_033380	human	genbank	54_36p	+1	reviewed	missense	c.4079	p.G1360A	0.965	HMMPfam_Collagen	HMMPfam_Collagen,superfamily_C-type_lectin_fold,HMMPfam_C4,HMMSmart_C4	-	no_errors
EPS8L3	79574	genome.wustl.edu	36	1	110096175	110096175	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	1	110096175	110096175	G	C	SNP	EPS8L3	NM_139053	human	genbank	54_36p	-1	reviewed	missense	c.1402	p.R468G	0.996	superfamily_SH3,HMMPfam_SH3_1,HMMSmart_SH3	HMMPfam_PTB,superfamily_SH3,HMMPfam_SH3_1,HMMSmart_SH3	-	no_errors
AHCYL1	10768	genome.wustl.edu	36	1	110363711	110363711	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	1	110363711	110363711	C	T	SNP	AHCYL1	NM_006621	human	genbank	54_36p	+1	validated	missense	c.1405	p.L469F	1.000	superfamily_Formate/glycerate dehydrogenase catalytic domain-like,HMMPfam_AdoHcyase	superfamily_Formate/glycerate dehydrogenase catalytic domain-like,HMMPfam_AdoHcyase,PatternScan_ADOHCYASE_1,superfamily_NAD(P)-binding Rossmann-fold domains,HMMPfam_AdoHcyase_NAD,PatternScan_ADOHCYASE_2	-	no_errors
C12orf30	80018	genome.wustl.edu	36	12	110994157	110994157	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	12	110994157	110994157	G	A	SNP	C12orf30	NM_024953	human	genbank	54_36p	-1	validated	nonsense	c.961	p.R321*	1.000	superfamily_TPR-like,HMMPfam_NatB_MDM20	superfamily_TPR-like,HMMPfam_NatB_MDM20	-	no_errors
LOC285412	285412	genome.wustl.edu	36	4	113597588	113597588	+	RNA	SNP	C	C	G	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	4	113597588	113597588	C	G	SNP	LOC285412	XR_017405	human	genbank	54_36p	+1	model	rna	NULL	NULL	0.006	-	-	-	pseudogene
ZDHHC23	254887	genome.wustl.edu	36	3	115150403	115150403	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	3	115150403	115150403	C	T	SNP	ZDHHC23	NM_173570	human	genbank	54_36p	+1	validated	missense	c.64	p.P22S	1.000	NULL	HMMPfam_zf-DHHC	-	no_errors
GOPC	57120	genome.wustl.edu	36	6	118006772	118006772	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	6	118006772	118006772	G	A	SNP	GOPC	NM_020399	human	genbank	54_36p	-1	validated	missense	c.434	p.T145I	1.000	NULL	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,PatternScan_RCC1_2	-	no_errors
DMXL1	1657	genome.wustl.edu	36	5	118528135	118528135	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	5	118528135	118528135	C	G	SNP	DMXL1	NM_005509	human	genbank	54_36p	+1	validated	missense	c.4737	p.H1579Q	0.994	NULL	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_SUBTILASE_ASP,PatternScan_WD_REPEATS_1	-	no_errors
GRIK4	2900	genome.wustl.edu	36	11	120338511	120338511	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	11	120338511	120338511	T	A	SNP	GRIK4	NM_014619	human	genbank	54_36p	+1	reviewed	missense	c.2177	p.M726K	1.000	HMMSmart_PBPe,superfamily_SSF53850,HMMPfam_Lig_chan	superfamily_SSF53822,HMMPfam_ANF_receptor,HMMSmart_PBPe,superfamily_SSF53850,HMMPfam_Lig_chan-Glu_bd,HMMPfam_Lig_chan	-	no_errors
C4orf31	79625	genome.wustl.edu	36	4	122186319	122186319	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	4	122186319	122186319	C	T	SNP	C4orf31	NM_024574	human	genbank	54_36p	-1	validated	missense	c.124	p.D42N	1.000	NULL	superfamily_FN_III-like,HMMSmart_FN3,HMMPfam_DUF2369	-	no_errors
TRPC3	7222	genome.wustl.edu	36	4	123073185	123073185	+	Silent	SNP	G	G	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	4	123073185	123073185	G	A	SNP	TRPC3	NM_003305	human	genbank	54_36p	-1	validated	silent	c.459	p.D153	1.000	superfamily_ANK	superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank,HMMPfam_TRP_2,HMMPfam_Ion_trans	-	no_errors
DMBT1	1755	genome.wustl.edu	36	10	124349652	124349652	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	10	124349652	124349652	C	G	SNP	DMBT1	ENST00000398134	human	ensembl	54_36p	+1	known	missense	c.2694	p.H898Q	0.001	NULL	superfamily_Srcr_receptor,HMMSmart_SR,HMMPfam_SRCR,PatternScan_SRCR_1,superfamily_CUB,HMMPfam_CUB,HMMSmart_CUB,HMMPfam_Zona_pellucida,HMMSmart_ZP,PatternScan_ZP_1	-	no_errors
MBNL3	55796	genome.wustl.edu	36	X	131352774	131352774	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	X	131352774	131352774	G	A	SNP	MBNL3	NM_018388	human	genbank	54_36p	-1	provisional	missense	c.553	p.R185C	1.000	superfamily_CCCH zinc finger,HMMSmart_SM00356,HMMPfam_zf-CCCH	HMMSmart_SM00356,HMMPfam_zf-CCCH,superfamily_CCCH zinc finger	-	no_errors
PLXNA4	91584	genome.wustl.edu	36	7	131480456	131480456	+	Silent	SNP	A	A	T	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	7	131480456	131480456	A	T	SNP	PLXNA4	NM_020911	human	genbank	54_36p	-1	validated	silent	c.5187	p.I1729	0.988	HMMPfam_Plexin_cytopl,superfamily_GTPase activation domain GAP	superfamily_Sema domain,HMMPfam_Sema,HMMSmart_SM00630,HMMPfam_PSI,HMMSmart_SM00423,superfamily_Plexin repeat,HMMSmart_SM00429,superfamily_E set domains,HMMPfam_TIG,HMMPfam_Plexin_cytopl,superfamily_GTPase activation domain GAP	-	no_errors
PCDH10	57575	genome.wustl.edu	36	4	134303649	134303649	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	4	134303649	134303649	G	A	SNP	PCDH10	NM_032961	human	genbank	54_36p	+1	reviewed	missense	c.2865	p.M955I	1.000	NULL	HMMPfam_Cadherin_2,superfamily_Cadherin-like,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin,PatternScan_EGF_1	-	no_errors
GPR112	139378	genome.wustl.edu	36	X	135309867	135309867	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	X	135309867	135309867	T	G	SNP	GPR112	NM_153834	human	genbank	54_36p	+1	validated	missense	c.8501	p.M2834R	1.000	HMMPfam_7tm_2	superfamily_ConA_like_lec_gl,HMMPfam_GPS,HMMSmart_GPS,HMMPfam_7tm_2,PatternScan_G_PROTEIN_RECEP_F2_2	-	no_errors
FAM13B	51306	genome.wustl.edu	36	5	137303872	137303872	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	5	137303872	137303872	C	G	SNP	FAM13B	NM_016603	human	genbank	54_36p	-1	validated	missense	c.2689	p.A897P	1.000	NULL	superfamily_Rho_GAP,HMMSmart_RhoGAP,HMMPfam_RhoGAP	-	no_errors
IFNGR1	3459	genome.wustl.edu	36	6	137561356	137561356	+	Silent	SNP	C	C	T	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	6	137561356	137561356	C	T	SNP	IFNGR1	NM_000416	human	genbank	54_36p	-1	reviewed	silent	c.975	p.P325	0.000	HMMPfam_IFNGR1	HMMPfam_IFNGR1,superfamily_Fibronectin type III	-	no_errors
STAG1	10274	genome.wustl.edu	36	3	137675074	137675074	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	3	137675074	137675074	G	T	SNP	STAG1	NM_005862	human	genbank	54_36p	-1	reviewed	missense	c.1122	p.F374L	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold,HMMPfam_STAG	-	no_errors
THSD7B	80731	genome.wustl.edu	36	2	138094737	138094737	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	2	138094737	138094737	C	A	SNP	THSD7B	NM_001080427	human	genbank	54_36p	+1	provisional	missense	c.3683	p.T1228K	0.998	superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1	superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1	-	no_errors
PCDHGB2	56103	genome.wustl.edu	36	5	140720543	140720543	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	5	140720543	140720543	C	G	SNP	PCDHGB2	NM_018923	human	genbank	54_36p	+1	reviewed	missense	c.657	p.D219E	0.002	superfamily_Cadherin-like,HMMSmart_SM00112,HMMPfam_Cadherin	superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors
PCDHGB3	56102	genome.wustl.edu	36	5	140730914	140730914	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	5	140730914	140730914	G	A	SNP	PCDHGB3	NM_018924	human	genbank	54_36p	+1	reviewed	missense	c.769	p.A257T	0.000	superfamily_Cadherin-like,HMMPfam_Cadherin	HMMSmart_SM00112,superfamily_Cadherin-like,HMMPfam_Cadherin_2,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors
LOC257039	257039	genome.wustl.edu	36	3	145057448	145057448	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	3	145057448	145057448	C	G	SNP	LOC257039	XM_172230	human	genbank	54_36p	-1	model	missense	c.492	p.E164D	1.000	HMMPfam_Ribosomal_S17e	HMMPfam_Ribosomal_S17e	-	no_errors
CUL1	8454	genome.wustl.edu	36	7	148117844	148117844	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	7	148117844	148117844	C	T	SNP	CUL1	NM_003592	human	genbank	54_36p	+1	validated	missense	c.1667	p.P556L	1.000	HMMPfam_Cullin,superfamily_Cullin homology domain,HMMSmart_SM00182	"superfamily_Cullin repeat,HMMPfam_Cullin,superfamily_Cullin homology domain,HMMSmart_SM00182,superfamily_""Winged helix"" DNA-binding domain,HMMPfam_Cullin_Nedd8,PatternScan_CULLIN_1"	-	no_errors
NR3C2	4306	genome.wustl.edu	36	4	149254777	149254777	+	Silent	SNP	C	C	T	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	4	149254777	149254777	C	T	SNP	NR3C2	NM_000901	human	genbank	54_36p	-1	validated	silent	c.2727	p.K909	1.000	superfamily_Str_ncl_receptor,HMMSmart_HOLI,HMMPfam_Hormone_recep	HMMSmart_ZnF_C4,HMMPfam_zf-C4,superfamily_SSF57716,PatternScan_NUCLEAR_REC_DBD_1,superfamily_Str_ncl_receptor,HMMSmart_HOLI,HMMPfam_Hormone_recep	-	no_errors
VMA21	203547	genome.wustl.edu	36	X	150322818	150322818	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	X	150322818	150322818	G	A	SNP	VMA21	NM_001017980	human	genbank	54_36p	+1	provisional	missense	c.111	p.M37I	1.000	HMMPfam_VMA21	HMMPfam_VMA21	-	no_errors
SLC4A2	6522	genome.wustl.edu	36	7	150402733	150402733	+	Silent	SNP	A	A	T	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	7	150402733	150402733	A	T	SNP	SLC4A2	NM_003040	human	genbank	54_36p	+1	validated	silent	c.2919	p.P973	0.004	HMMPfam_HCO3_cotransp	superfamily_Phoshotransferase/anion transport protein,HMMPfam_Band_3_cyto,HMMPfam_HCO3_cotransp,PatternScan_ANION_EXCHANGER_1,PatternScan_ANION_EXCHANGER_2	-	no_errors
FLG	2312	genome.wustl.edu	36	1	150552495	150552495	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	1	150552495	150552495	G	C	SNP	FLG	NM_002016	human	genbank	54_36p	-1	provisional	missense	c.1491	p.H497Q	0.000	NULL	superfamily_SSF47473,HMMPfam_S_100,PatternScan_S100_CABP,PatternScan_EF_HAND_1,HMMPfam_Filaggrin	-	no_errors
FCRL2	79368	genome.wustl.edu	36	1	156003359	156003359	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	1	156003359	156003359	T	A	SNP	FCRL2	NM_138738	human	genbank	54_36p	-1	validated	missense	c.430	p.M144L	0.000	NULL	superfamily_Immunoglobulin	-	no_errors
AIM2	9447	genome.wustl.edu	36	1	157304983	157304983	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	1	157304983	157304983	T	A	SNP	AIM2	NM_004833	human	genbank	54_36p	-1	reviewed	missense	c.395	p.K132M	0.051	NULL	superfamily_DEATH_like,HMMPfam_PAAD_DAPIN,HMMPfam_HIN	-	no_errors
ITGB6	3694	genome.wustl.edu	36	2	160702858	160702858	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	2	160702858	160702858	G	C	SNP	ITGB6	NM_000888	human	genbank	54_36p	-1	provisional	missense	c.1206	p.H402Q	0.441	HMMPfam_Integrin_beta,HMMSmart_SM00187,superfamily_Integrin domains	HMMSmart_SM00423,HMMPfam_Integrin_beta,HMMSmart_SM00187,superfamily_Integrin domains,superfamily_vWA-like,PatternScan_EGF_1,superfamily_EGF/Laminin,HMMPfam_EGF_2,PatternScan_INTEGRIN_BETA,PatternScan_EGF_2,superfamily_Integrin beta tail domain,HMMPfam_Integrin_B_tail,HMMPfam_Integrin_b_cyt	-	no_errors
LOC646085	646085	genome.wustl.edu	36	3	162530195	162530195	+	RNA	SNP	C	C	T	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	3	162530195	162530195	C	T	SNP	LOC646085	XR_017630	human	genbank	54_36p	-1	model	rna	NULL	NULL	1.000	-	-	-	pseudogene
FIGN	55137	genome.wustl.edu	36	2	164175267	164175267	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	2	164175267	164175267	G	T	SNP	FIGN	NM_018086	human	genbank	54_36p	-1	validated	missense	c.1321	p.P441T	0.998	NULL	superfamily_SSF52540,HMMSmart_AAA,HMMPfam_AAA,PatternScan_AAA	-	no_errors
SCN3A	6328	genome.wustl.edu	36	2	165705699	165705699	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	2	165705699	165705699	C	A	SNP	SCN3A	NM_006922	human	genbank	54_36p	-1	reviewed	missense	c.1727	p.S576I	1.000	NULL	superfamily_SSF81324,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc,HMMSmart_IQ,HMMPfam_IQ	-	no_errors
DDX60	55601	genome.wustl.edu	36	4	169420438	169420438	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	4	169420438	169420438	G	C	SNP	DDX60	NM_017631	human	genbank	54_36p	-1	validated	missense	c.3115	p.Q1039E	0.024	superfamily_P-loop containing nucleoside triphosphate hydrolases	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_DEAD,HMMSmart_SM00490,HMMPfam_Helicase_C	-	no_errors
DOCK2	1794	genome.wustl.edu	36	5	169438586	169438586	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	5	169438586	169438586	C	T	SNP	DOCK2	NM_004946	human	genbank	54_36p	+1	validated	missense	c.5024	p.T1675M	0.551	NULL	superfamily_SH3-domain,HMMSmart_SM00326,HMMPfam_SH3_2,superfamily_Cytochrome c	-	no_errors
ASTN1	460	genome.wustl.edu	36	1	175100126	175100126	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	1	175100126	175100126	G	A	SNP	ASTN1	NM_004319	human	genbank	54_36p	-1	validated	missense	c.3802	p.L1268F	1.000	NULL	HMMSmart_EGF,HMMSmart_MACPF,superfamily_FN_III-like,HMMSmart_FN3	-	no_errors
SNCB	6620	genome.wustl.edu	36	5	175986345	175986345	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	5	175986345	175986345	C	G	SNP	SNCB	NM_001001502	human	genbank	54_36p	-1	reviewed	missense	c.145	p.V49L	1.000	HMMPfam_Synuclein	HMMPfam_Synuclein	-	no_errors
HMCN1	83872	genome.wustl.edu	36	1	184361418	184361418	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	1	184361418	184361418	A	C	SNP	HMCN1	NM_031935	human	genbank	54_36p	+1	reviewed	missense	c.12559	p.I4187L	0.007	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408	superfamily_vWA-like,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMPfam_ig,HMMSmart_SM00408,HMMPfam_I-set,HMMSmart_SM00406,PatternScan_CECROPIN,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMSmart_SM00682,HMMPfam_G2F,superfamily_GFP-like,PatternScan_EGF_CA,HMMSmart_SM00179,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_ASX_HYDROXYL,HMMPfam_EGF_CA,PatternScan_EGF_2	-	no_errors
MCF2L2	23101	genome.wustl.edu	36	3	184424654	184424654	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	3	184424654	184424654	A	C	SNP	MCF2L2	NM_015078	human	genbank	54_36p	-1	validated	missense	c.2134	p.Y712D	0.999	superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325	HMMSmart_SM00516,superfamily_Spectrin repeat,HMMSmart_SM00150,superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	-	no_errors
TPR	7175	genome.wustl.edu	36	1	184554333	184554333	+	Silent	SNP	G	G	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	1	184554333	184554333	G	A	SNP	TPR	NM_003292	human	genbank	54_36p	-1	reviewed	silent	c.6690	p.T2230	0.932	NULL	superfamily_Prefoldin,HMMPfam_TPR_MLP1_2	-	no_errors
WDR53	348793	genome.wustl.edu	36	3	197772650	197772650	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	3	197772650	197772650	C	T	SNP	WDR53	NM_182627	human	genbank	54_36p	-1	provisional	missense	c.94	p.D32N	0.955	HMMSmart_SM00320,superfamily_WD40 repeat-like	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors
PIK3C2B	5287	genome.wustl.edu	36	1	202669661	202669661	+	Silent	SNP	A	A	G	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	1	202669661	202669661	A	G	SNP	PIK3C2B	NM_002646	human	genbank	54_36p	-1	reviewed	silent	c.3726	p.Y1242	1.000	superfamily_Protein kinase-like (PK-like),HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146	superfamily_Ubiquitin-like,HMMPfam_PI3K_rbd,HMMSmart_SM00144,HMMSmart_SM00142,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_PI3K_C2,superfamily_ARM repeat,HMMSmart_SM00145,HMMPfam_PI3Ka,superfamily_Protein kinase-like (PK-like),HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_PX domain,HMMPfam_PX,HMMSmart_SM00312,HMMSmart_SM00239,HMMPfam_C2	-	no_errors
DUSP5P	574029	genome.wustl.edu	36	1	226852867	226852867	+	RNA	SNP	G	G	C	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	1	226852867	226852867	G	C	SNP	DUSP5P	NR_002834	human	genbank	54_36p	+1	provisional	rna	NULL	NULL	0.997	-	-	-	pseudogene
TARBP1	6894	genome.wustl.edu	36	1	232680543	232680543	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	1	232680543	232680543	G	T	SNP	TARBP1	NM_005646	human	genbank	54_36p	-1	reviewed	missense	c.930	p.N310K	0.291	NULL	superfamily_ARM-type_fold,superfamily_SSF75217,HMMPfam_SpoU_methylase	-	no_errors
RYR2	6262	genome.wustl.edu	36	1	235820663	235820663	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	1	235820663	235820663	G	A	SNP	RYR2	NM_001035	human	genbank	54_36p	+1	reviewed	missense	c.3908	p.R1303H	0.877	NULL	HMMPfam_Ins145_P3_rec,HMMSmart_SM00472,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMPfam_RYDR_ITPR,HMMPfam_SPRY,HMMSmart_SM00449,HMMPfam_RyR,HMMPfam_RIH_assoc,superfamily_EF-hand,HMMPfam_RR_TM4-6,HMMPfam_Ion_trans	-	no_errors
ALLC	55821	genome.wustl.edu	36	2	3727027	3727029	+	In_Frame_Del	DEL	GAA	GAA	-	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	GAA	GAA					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	2	3727027	3727029	GAA	-	DEL	ALLC	NM_018436	human	genbank	54_36p	+1	validated	in_frame_del	c.901_903	p.E303in_frame_del	0.866:0.921:0.929	superfamily_Gal_bind_like,HMMPfam_Allantoicase	superfamily_Gal_bind_like,HMMPfam_Allantoicase	(deletion:cds_exon[3726977,3727101])	no_errors
ELAVL3	1995	genome.wustl.edu	36	19	11430102	11430125	+	Splice_Site	DEL	CTGCCAGGGGGCAGGGATGTCCAT	CTGCCAGGGGGCAGGGATGTCCAT	-	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	CTGCCAGGGGGCAGGGATGTCCAT	CTGCCAGGGGGCAGGGATGTCCAT					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	19	11430102	11430125	CTGCCAGGGGGCAGGGATGTCCAT	-	DEL	ELAVL3	NM_001420	human	genbank	54_36p	-1	reviewed	splice_site_del	c.488-24_488-1	e5-1	1.000:1.000:0.998:0.245:0.027:0.000:0.001:0.001:0.000:0.000:0.000:0.000:0.000:0.002:0.025:0.046:0.000:0.000:0.001:0.001:0.001:0.001:0.000:0.000	-	-	(deletion:intron[11430102,11430272])	no_errors
CTPS2	56474	genome.wustl.edu	36	X	16626379	16626403	+	Frame_Shift_Del	DEL	AACTGTAGAAAGAAGTATTAATACA	AACTGTAGAAAGAAGTATTAATACA	-	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	AACTGTAGAAAGAAGTATTAATACA	AACTGTAGAAAGAAGTATTAATACA					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	X	16626379	16626403	AACTGTAGAAAGAAGTATTAATACA	-	DEL	CTPS2	NM_019857	human	genbank	54_36p	-1	reviewed	frame_shift_del	c.339_338	p.V113fs	0.999:1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_CTP_synth_N	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_CTP_synth_N,superfamily_Class I glutamine amidotransferase-like,HMMPfam_GATase	(deletion:cds_exon[16626280,16626380], intron[16626381,16626966])	no_errors
ENSG00000196306	0	genome.wustl.edu	36	6	29963560	29963565	+	In_Frame_Del	DEL	CCCTGA	CCCTGA	-	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	CCCTGA	CCCTGA					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	6	29963560	29963565	CCCTGA	-	DEL	ENSG00000196306	ENST00000360432	human	ensembl	54_36p	+1	known	in_frame_del	c.53_58	p.LT21in_frame_del	0.006:0.005:0.008:0.010:0.007:0.004	NULL	HMMPfam_MHC_I,superfamily_MHC antigen-recognition domain,superfamily_Immunoglobulin,HMMPfam_C1-set,HMMSmart_SM00407,PatternScan_IG_MHC,HMMPfam_MHC_I_C	(deletion:cds_exon[29963508,29963586])	no_errors
RALY	22913	genome.wustl.edu	36	20	32128525	32128526	+	In_Frame_Ins	INS	-	-	CAG	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	-	-					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	20	32128525	32128526	-	CAG	INS	RALY	NM_016732	human	genbank	54_36p	+1	reviewed	in_frame_ins	c.689_690	p.231in_frame_insS	0.001:0.002	NULL	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	-	no_errors
CARD10	29775	genome.wustl.edu	36	22	36236255	36236260	+	In_Frame_Del	DEL	CTCCTT	CTCCTT	-	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	CTCCTT	CTCCTT					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	22	36236255	36236260	CTCCTT	-	DEL	CARD10	NM_014550	human	genbank	54_36p	-1	reviewed	in_frame_del	c.819_814	p.KE272in_frame_del	0.883:0.892:0.901:0.911:0.921:0.932	NULL	superfamily_DEATH_like,HMMPfam_CARD,superfamily_SSF52540	(deletion:cds_exon[36236165,36236374])	no_errors
TTBK1	84630	genome.wustl.edu	36	6	43358704	43358706	+	In_Frame_Del	DEL	GAA	GAA	-	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	GAA	GAA					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	6	43358704	43358706	GAA	-	DEL	TTBK1	NM_032538	human	genbank	54_36p	+1	validated	in_frame_del	c.2248_2250	p.E753in_frame_del	0.944:0.724:0.281	NULL	superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP	(deletion:cds_exon[43358443,43360028])	no_errors
MOAP1	64112	genome.wustl.edu	36	14	92719878	92719894	+	Frame_Shift_Del	DEL	GCTGAAGAGCCTCTAAT	GCTGAAGAGCCTCTAAT	-	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	GCTGAAGAGCCTCTAAT	GCTGAAGAGCCTCTAAT					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	14	92719878	92719894	GCTGAAGAGCCTCTAAT	-	DEL	MOAP1	NM_022151	human	genbank	54_36p	-1	reviewed	frame_shift_del	c.463_447	p.L150fs	0.967:0.967:0.962:0.918:0.885:0.811:0.641:0.007:0.005:0.002:0.000:0.000:0.001:0.003:0.267:0.282:0.347	NULL	NULL	(deletion:cds_exon[92719285,92720340])	no_errors
ZAN	7455	genome.wustl.edu	36	7	100223498	100223532	+	Frame_Shift_Del	DEL	GCTTCAGCTACCGCTTGCAAGGCCGCATGACCTAT	GCTTCAGCTACCGCTTGCAAGGCCGCATGACCTAT	-	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	GCTTCAGCTACCGCTTGCAAGGCCGCATGACCTAT	GCTTCAGCTACCGCTTGCAAGGCCGCATGACCTAT					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	7	100223498	100223532	GCTTCAGCTACCGCTTGCAAGGCCGCATGACCTAT	-	DEL	ZAN	ENST00000349350	human	ensembl	54_36p	+1	known	frame_shift_del	c.7028_7062	p.F2344fs	0.088:0.076:0.047:0.031:0.008:0.004:0.007:0.317:0.790:0.908:0.967:0.964:0.963:0.997:1.000:0.999:0.997:0.968:0.891:0.954:1.000:1.000:1.000:0.999:0.998:0.998:1.000:0.999:1.000:1.000:1.000:1.000:1.000:0.990:0.736	HMMSmart_SM00216,HMMPfam_VWD	HMMSmart_SM00137,HMMPfam_MAM,PatternScan_MAM_1,superfamily_Serine proterase inhibitors,HMMPfam_TIL,PatternScan_EGF_2,HMMSmart_SM00215,HMMPfam_TIL_assoc,HMMSmart_SM00216,HMMPfam_VWD,HMMPfam_C8,HMMSmart_SM00181,HMMSmart_SM00214,superfamily_EGF/Laminin,HMMPfam_EGF,PatternScan_EGF_1	(deletion:cds_exon[100223447,100223694])	no_errors
GOT1	2805	genome.wustl.edu	36	10	101170481	101170499	+	Frame_Shift_Del	DEL	CATTAGCAATCTTCTGCTC	CATTAGCAATCTTCTGCTC	-	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	CATTAGCAATCTTCTGCTC	CATTAGCAATCTTCTGCTC					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	10	101170481	101170499	CATTAGCAATCTTCTGCTC	-	DEL	GOT1	NM_002079	human	genbank	54_36p	-1	reviewed	frame_shift_del	c.190_172	p.E58fs	0.893:0.005:0.024:0.031:0.067:0.984:0.997:0.995:1.000:1.000:1.000:0.998:0.994:0.996:1.000:1.000:1.000:1.000:1.000	superfamily_PLP-dependent transferases,HMMPfam_Aminotran_1_2	superfamily_PLP-dependent transferases,HMMPfam_Aminotran_1_2,PatternScan_AA_TRANSFER_CLASS_1	(deletion:cds_exon[101170371,101170552])	no_errors
ATM	472	genome.wustl.edu	36	11	107683908	107683928	+	Frame_Shift_Del	DEL	AGAAGACAAAAGAGGTAATGT	AGAAGACAAAAGAGGTAATGT	-	novel	unknown	TCGA-61-1727-01A-01W-0639-09	TCGA-61-1727-11A-01W-0639-09	AGAAGACAAAAGAGGTAATGT	AGAAGACAAAAGAGGTAATGT					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	a937f182-b6f2-4c03-acec-95f76d7bf20c	98704722-7d91-4cee-a64f-cdf4de6c0658	11	107683908	107683928	AGAAGACAAAAGAGGTAATGT	-	DEL	ATM	NM_000051	human	genbank	54_36p	+1	reviewed	frame_shift_del	c.5749_5762	p.R1917fs	1.000:1.000:1.000:1.000:1.000:0.999:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	superfamily_ARM repeat	superfamily_ARM repeat,HMMPfam_FAT,superfamily_Protein kinase-like (PK-like),HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,HMMPfam_FATC	(deletion:cds_exon[107683834,107683921], intron[107683922,107686096])	no_errors
