Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error
PTDSS2	81490	genome.wustl.edu	36	11	469122	469122	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	11	469122	469122	C	A	SNP	PTDSS2	NM_030783	human	genbank	54_36p	+1	provisional	nonsense	c.405	p.Y135*	1.000	HMMPfam_PSS	HMMPfam_PSS	-	no_errors
TULP3	7289	genome.wustl.edu	36	12	2917708	2917708	+	Silent	SNP	T	C	C	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	12	2917708	2917708	T	C	SNP	TULP3	NM_003324	human	genbank	54_36p	+1	reviewed	silent	c.1191	p.N397	1.000	superfamily_Transcriptional factor tubby C-terminal domain,HMMPfam_Tub	superfamily_Transcriptional factor tubby C-terminal domain,HMMPfam_Tub,PatternScan_TUB_1,PatternScan_TUB_2	-	no_errors
ATRN	8455	genome.wustl.edu	36	20	3512634	3512634	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	20	3512634	3512634	T	G	SNP	ATRN	NM_139321	human	genbank	54_36p	+1	reviewed	missense	c.2854	p.C952G	1.000	HMMPfam_PSI,HMMSmart_SM00423	superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF_2,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042,superfamily_Galactose oxidase central domain,HMMPfam_Kelch_1,HMMPfam_Kelch_2,HMMPfam_PSI,HMMSmart_SM00423,superfamily_C-type lectin-like,HMMSmart_SM00034,HMMPfam_Lectin_C,HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_LAM_1	-	no_errors
C6orf145	221749	genome.wustl.edu	36	6	3668965	3668965	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	6	3668965	3668965	C	A	SNP	C6orf145	NM_183373	human	genbank	54_36p	-1	validated	nonsense	c.583	p.E195*	1.000	NULL	superfamily_PX	-	no_errors
SLC29A4	222962	genome.wustl.edu	36	7	5305520	5305520	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	7	5305520	5305520	T	C	SNP	SLC29A4	NM_001040661	human	genbank	54_36p	+1	reviewed	missense	c.1145	p.I382T	0.990	superfamily_MFS general substrate transporter,HMMPfam_Nucleoside_tran	superfamily_MFS general substrate transporter,HMMPfam_Nucleoside_tran	-	no_errors
TP53	7157	genome.wustl.edu	36	17	7519260	7519260	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	17	7519260	7519260	T	C	SNP	TP53	NM_000546	human	genbank	54_36p	-1	reviewed	missense	c.395	p.K132R	1.000	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors
KIF1B	23095	genome.wustl.edu	36	1	10279706	10279706	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	1	10279706	10279706	C	G	SNP	KIF1B	NM_015074	human	genbank	54_36p	+1	reviewed	missense	c.1888	p.Q630E	1.000	NULL	HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Kinesin,PatternScan_KINESIN_MOTOR_DOMAIN1,superfamily_SMAD/FHA domain,HMMSmart_SM00240,HMMPfam_FHA,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	-	no_errors
TNFRSF8	943	genome.wustl.edu	36	1	12067111	12067111	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	1	12067111	12067111	C	T	SNP	TNFRSF8	NM_001243	human	genbank	54_36p	+1	reviewed	nonsense	c.67	p.R23*	0.009	NULL	HMMPfam_TNFR_c6,HMMSmart_SM00208,superfamily_TNF receptor-like,PatternScan_TNFR_NGFR_1	-	no_errors
MRC1L1	414308	genome.wustl.edu	36	10	17967411	17967411	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	10	17967411	17967411	G	T	SNP	MRC1L1	NM_001009567	human	genbank	54_36p	+1	reviewed	missense	c.3107	p.G1036V	0.995	superfamily_C-type lectin-like,HMMSmart_SM00034,HMMPfam_Lectin_C	superfamily_Ricin B-like lectins,HMMSmart_SM00458,HMMPfam_Ricin_B_lectin,superfamily_Kringle-like,HMMSmart_SM00059,HMMPfam_fn2,PatternScan_FN2_1,superfamily_C-type lectin-like,HMMSmart_SM00034,HMMPfam_Lectin_C,PatternScan_C_TYPE_LECTIN_1	-	no_errors
LOC283523	283523	genome.wustl.edu	36	13	18153004	18153004	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	13	18153004	18153004	G	A	SNP	LOC283523	XM_001714856	human	genbank	54_36p	+1	model	missense	c.460	p.A154T	0.981	superfamily_Telomeric repeat binding factor (TRF) dimerisation domain,HMMPfam_TRF	superfamily_Telomeric repeat binding factor (TRF) dimerisation domain,HMMPfam_TRF,superfamily_Homeodomain-like,HMMSmart_SM00717,HMMPfam_Myb_DNA-binding	-	pseudogene
LOC100128765	0	genome.wustl.edu	36	13	18603747	18603747	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	13	18603747	18603747	A	T	SNP	LOC100128765	XM_001714904	human	genbank	54_36p	+1	model	missense	c.594	p.Q198H	0.006	NULL	HMMPfam_Mis6	-	no_errors
LOC646096	646096	genome.wustl.edu	36	15	18748882	18748882	+	RNA	SNP	C	C	A	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	15	18748882	18748882	C	A	SNP	LOC646096	XR_040858	human	genbank	54_36p	+1	model	rna	NULL	NULL	0.889	-	-	-	no_errors
LOC100128060	0	genome.wustl.edu	36	13	21100777	21100777	+	Silent	SNP	G	G	A	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	13	21100777	21100777	G	A	SNP	LOC100128060	XM_001718205	human	genbank	54_36p	-1	model	silent	c.378	p.H126	1.000	HMMPfam_Ribosomal_S7e	HMMPfam_Ribosomal_S7e,PatternScan_RIBOSOMAL_S7E	-	pseudogene
ALK	238	genome.wustl.edu	36	2	29269704	29269704	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	2	29269704	29269704	C	T	SNP	ALK	NM_004304	human	genbank	54_36p	-1	reviewed	missense	c.4753	p.G1585S	1.000	NULL	superfamily_LDL receptor-like module,HMMSmart_SM00192,HMMPfam_MAM,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR,PatternScan_RECEPTOR_TYR_KIN_II	-	no_errors
C20orf152	140894	genome.wustl.edu	36	20	34081816	34081816	+	Silent	SNP	G	G	A	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	20	34081816	34081816	G	A	SNP	C20orf152	NM_080834	human	genbank	54_36p	+1	predicted	silent	c.1551	p.K517	0.222	NULL	superfamily_cNMP_binding,HMMSmart_cNMP,HMMPfam_cNMP_binding,PatternScan_CNMP_BINDING_1	-	no_errors
LMBRD2	92255	genome.wustl.edu	36	5	36158785	36158785	+	Silent	SNP	G	G	A	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	5	36158785	36158785	G	A	SNP	LMBRD2	NM_001007527	human	genbank	54_36p	-1	validated	silent	c.858	p.N286	1.000	HMMPfam_LMBR1	HMMPfam_LMBR1	-	no_errors
EIF2C3	192669	genome.wustl.edu	36	1	36265339	36265339	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	1	36265339	36265339	G	T	SNP	EIF2C3	NM_024852	human	genbank	54_36p	+1	reviewed	missense	c.1444	p.A482S	1.000	NULL	HMMPfam_DUF1785,superfamily_SSF101690,HMMPfam_PAZ,superfamily_RNaseH_fold,HMMPfam_Piwi	-	no_errors
PLCG1	5335	genome.wustl.edu	36	20	39224709	39224709	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	20	39224709	39224709	G	A	SNP	PLCG1	NM_002660	human	genbank	54_36p	+1	reviewed	missense	c.611	p.R204H	1.000	superfamily_SSF47473	superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH,PatternScan_EF_HAND_1,superfamily_SSF47473,HMMSmart_PLCXc,HMMPfam_PI-PLC-X,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_SSF55550,HMMSmart_SH2,HMMPfam_SH2,superfamily_SH3,HMMPfam_SH3_1,HMMSmart_SH3,HMMPfam_PI-PLC-Y,HMMSmart_PLCYc,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_C2	-	no_errors
C9	735	genome.wustl.edu	36	5	39324698	39324698	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	5	39324698	39324698	C	A	SNP	C9	NM_001737	human	genbank	54_36p	-1	reviewed	missense	c.1529	p.C510F	0.611	superfamily_SSF57196	superfamily_TSP1,HMMSmart_TSP1,HMMPfam_TSP_1,HMMPfam_Ldl_recept_a,superfamily_LDL_rcpt_classA_cys-rich,HMMSmart_LDLa,PatternScan_LDLRA_1,HMMPfam_MACPF,HMMSmart_MACPF,PatternScan_MAC_PERFORIN,superfamily_SSF57196,PatternScan_EGF_2,PatternScan_EGF_1	-	no_errors
MACF1	23499	genome.wustl.edu	36	1	39693191	39693191	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	1	39693191	39693191	C	A	SNP	MACF1	NM_033044	human	genbank	54_36p	+1	reviewed	missense	c.16239	p.H5413Q	1.000	HMMPfam_Spectrin,superfamily_Spectrin,HMMSmart_SPEC	superfamily_SSF75399,HMMSmart_PLEC,HMMPfam_Plectin,HMMPfam_Spectrin,superfamily_Spectrin,HMMSmart_SPEC,PatternScan_GLYCOSYL_HYDROL_F5,superfamily_SSF47473,HMMSmart_EFh,HMMPfam_efhand,PatternScan_EF_HAND_1,HMMPfam_GAS2,HMMSmart_GAS2	-	no_errors
NPHS1	4868	genome.wustl.edu	36	19	41025228	41025228	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	19	41025228	41025228	C	T	SNP	NPHS1	NM_004646	human	genbank	54_36p	-1	validated	missense	c.2399	p.R800H	0.989	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_C2-set_2,HMMPfam_I-set,HMMPfam_ig,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	-	no_errors
MMP9	4318	genome.wustl.edu	36	20	44075367	44075367	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	20	44075367	44075367	C	T	SNP	MMP9	NM_004994	human	genbank	54_36p	+1	reviewed	missense	c.1397	p.T466M	0.011	NULL	"superfamily_PGBD-like,HMMPfam_PG_binding_1,PatternScan_CYSTEINE_SWITCH,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMSmart_SM00235,HMMPfam_Peptidase_M10,superfamily_Kringle-like,HMMSmart_SM00059,HMMPfam_fn2,PatternScan_FN2_1,HMMPfam_PT,superfamily_Hemopexin-like domain,HMMPfam_Hemopexin,HMMSmart_SM00120,PatternScan_HEMOPEXIN"	-	no_errors
WFIKKN2	124857	genome.wustl.edu	36	17	46272360	46272360	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	17	46272360	46272360	C	T	SNP	WFIKKN2	NM_175575	human	genbank	54_36p	+1	reviewed	missense	c.712	p.R238W	0.986	superfamily_SSF48726,HMMPfam_I-set,HMMSmart_IGc2	PatternScan_KAZAL,superfamily_WAP,HMMPfam_WAP,HMMSmart_WAP,PatternScan_4_DISULFIDE_CORE,superfamily_SSF100895,HMMPfam_Kazal_2,HMMSmart_KAZAL,superfamily_SSF48726,HMMPfam_I-set,HMMSmart_IGc2,superfamily_Prot_inh_Kunz-m,HMMSmart_KU,HMMPfam_Kunitz_BPTI,PatternScan_BPTI_KUNITZ_1,superfamily_TIMP_like	-	no_errors
ACCN2	41	genome.wustl.edu	36	12	48739879	48739879	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	12	48739879	48739879	C	T	SNP	ACCN2	NM_020039	human	genbank	54_36p	+1	reviewed	missense	c.433	p.R145C	1.000	HMMPfam_ASC	HMMPfam_ASC,PatternScan_ASC	-	no_errors
UNC13C	440279	genome.wustl.edu	36	15	52612421	52612421	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	15	52612421	52612421	T	C	SNP	UNC13C	NM_001080534	human	genbank	54_36p	+1	provisional	missense	c.5561	p.I1854T	1.000	HMMPfam_DUF1041	superfamily_SSF57889,HMMSmart_C1,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_C2,HMMPfam_DUF1041,HMMPfam_Membr_traf_MHD	-	no_errors
CABP5	56344	genome.wustl.edu	36	19	53229299	53229299	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	19	53229299	53229299	T	C	SNP	CABP5	NM_019855	human	genbank	54_36p	-1	reviewed	missense	c.481	p.T161A	0.571	superfamily_SSF47473,HMMSmart_EFh,HMMPfam_efhand,PatternScan_EF_HAND_1	superfamily_SSF47473,HMMSmart_EFh,HMMPfam_efhand,PatternScan_EF_HAND_1	-	no_errors
OR8K5	219453	genome.wustl.edu	36	11	55683661	55683661	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	11	55683661	55683661	C	A	SNP	OR8K5	NM_001004058	human	genbank	54_36p	-1	validated	missense	c.709	p.A237S	0.994	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors
FAM81A	145773	genome.wustl.edu	36	15	57539622	57539622	+	Silent	SNP	C	C	T	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	15	57539622	57539622	C	T	SNP	FAM81A	NM_152450	human	genbank	54_36p	+1	validated	silent	c.219	p.R73	0.937	NULL	NULL	-	no_errors
CDH4	1002	genome.wustl.edu	36	20	59932073	59932073	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	20	59932073	59932073	G	T	SNP	CDH4	NM_001794	human	genbank	54_36p	+1	reviewed	missense	c.1544	p.R515L	1.000	superfamily_Cadherin,HMMPfam_Cadherin	superfamily_Cadherin,HMMPfam_Cadherin_pro,HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin_C	-	no_errors
GP6	51206	genome.wustl.edu	36	19	60217599	60217599	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	19	60217599	60217599	G	A	SNP	GP6	NM_001083899	human	genbank	54_36p	-1	validated	missense	c.1526	p.T509M	0.007	NULL	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig	-	no_errors
ZNF17	7565	genome.wustl.edu	36	19	62623975	62623975	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	19	62623975	62623975	G	C	SNP	ZNF17	NM_006959	human	genbank	54_36p	+1	validated	missense	c.1303	p.V435L	0.036	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2	-	no_errors
DCK	1633	genome.wustl.edu	36	4	72108233	72108233	+	Silent	SNP	A	A	G	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	4	72108233	72108233	A	G	SNP	DCK	NM_000788	human	genbank	54_36p	+1	reviewed	silent	c.495	p.Q165	1.000	superfamily_SSF52540,HMMPfam_dNK	superfamily_SSF52540,HMMPfam_dNK	-	no_errors
RNF213	57674	genome.wustl.edu	36	17	75935083	75935083	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	17	75935083	75935083	G	A	SNP	RNF213	NM_020914	human	genbank	54_36p	+1	validated	missense	c.2572	p.A858T	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4	-	no_errors
VCAN	1462	genome.wustl.edu	36	5	82821904	82821904	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	5	82821904	82821904	T	A	SNP	VCAN	NM_004385	human	genbank	54_36p	+1	validated	missense	c.302	p.V101E	0.981	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409,superfamily_C-type lectin-like,HMMSmart_SM00445,HMMPfam_Xlink,PatternScan_LINK_1,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF,HMMSmart_SM00179,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_EGF_CA,PatternScan_ASX_HYDROXYL,HMMSmart_SM00034,HMMPfam_Lectin_C,PatternScan_C_TYPE_LECTIN_1,superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032	-	no_errors
AMY2B	280	genome.wustl.edu	36	1	103915880	103915880	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	1	103915880	103915880	C	T	SNP	AMY2B	NM_020978	human	genbank	54_36p	+1	reviewed	nonsense	c.133	p.R45*	1.000	superfamily_(Trans)glycosidases,HMMPfam_Alpha-amylase,HMMSmart_SM00642	superfamily_(Trans)glycosidases,HMMPfam_Alpha-amylase,HMMSmart_SM00642,superfamily_Glycosyl hydrolase domain,HMMSmart_SM00632,HMMPfam_Alpha-amylase_C	-	no_errors
ELOVL3	83401	genome.wustl.edu	36	10	103978721	103978721	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	10	103978721	103978721	G	A	SNP	ELOVL3	NM_152310	human	genbank	54_36p	+1	provisional	missense	c.535	p.A179T	0.988	HMMPfam_ELO	HMMPfam_ELO,PatternScan_ELO	-	no_errors
AHNAK2	113146	genome.wustl.edu	36	14	104489872	104489872	+	Silent	SNP	G	G	A	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	14	104489872	104489872	G	A	SNP	AHNAK2	NM_138420	human	genbank	54_36p	-1	validated	silent	c.2961	p.A987	0.000	NULL	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,HMMPfam_Involucrin	-	no_errors
LOC728914	728914	genome.wustl.edu	36	4	113706054	113706054	+	RNA	SNP	A	A	T	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	A	A					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	4	113706054	113706054	A	T	SNP	LOC728914	XR_015818	human	genbank	54_36p	+1	model	rna	NULL	NULL	0.919	-	-	-	pseudogene
THOC2	57187	genome.wustl.edu	36	X	122628676	122628676	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	X	122628676	122628676	G	C	SNP	THOC2	NM_001081550	human	genbank	54_36p	-1	validated	missense	c.1152	p.C384W	1.000	NULL	NULL	-	no_errors
GOLGA1	2800	genome.wustl.edu	36	9	126714027	126714027	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	9	126714027	126714027	C	T	SNP	GOLGA1	NM_002077	human	genbank	54_36p	-1	reviewed	missense	c.943	p.E315K	1.000	superfamily_Prefoldin	superfamily_Prefoldin,HMMPfam_GRIP,HMMSmart_SM00755	-	no_errors
EP400	57634	genome.wustl.edu	36	12	131068798	131068798	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	12	131068798	131068798	C	T	SNP	EP400	NM_015409	human	genbank	54_36p	+1	validated	missense	c.4198	p.R1400W	0.915	NULL	HMMPfam_HSA,HMMSmart_HSA,superfamily_SSF52540,HMMSmart_DEXDc,HMMPfam_SNF2_N,HMMSmart_HELICc,HMMPfam_Helicase_C,superfamily_Homeodomain_like	-	no_errors
ANKRD35	148741	genome.wustl.edu	36	1	144273287	144273287	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	1	144273287	144273287	C	T	SNP	ANKRD35	NM_144698	human	genbank	54_36p	+1	validated	nonsense	c.1618	p.R540*	0.410	NULL	superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank	-	no_errors
LOC729176	729176	genome.wustl.edu	36	6	147165550	147165550	+	RNA	SNP	C	C	T	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	6	147165550	147165550	C	T	SNP	LOC729176	NR_003954	human	genbank	54_36p	-1	validated	rna	NULL	NULL	0.319	-	-	-	pseudogene
TDRKH	11022	genome.wustl.edu	36	1	150022009	150022009	+	Silent	SNP	C	C	T	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	1	150022009	150022009	C	T	SNP	TDRKH	NM_001083963	human	genbank	54_36p	-1	validated	silent	c.114	p.R38	0.972	NULL	superfamily_Eukaryotic type KH-domain (KH-domain type I),HMMSmart_SM00322,HMMPfam_KH_1,HMMPfam_TUDOR,superfamily_Tudor/PWWP/MBT,HMMSmart_SM00333	-	no_errors
NMD3	51068	genome.wustl.edu	36	3	162427746	162427746	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	3	162427746	162427746	G	T	SNP	NMD3	NM_015938	human	genbank	54_36p	+1	provisional	missense	c.197	p.G66V	1.000	HMMPfam_NMD3	HMMPfam_NMD3	-	no_errors
SLC7A14	57709	genome.wustl.edu	36	3	171699183	171699183	+	Silent	SNP	C	C	T	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	3	171699183	171699183	C	T	SNP	SLC7A14	NM_020949	human	genbank	54_36p	-1	validated	silent	c.726	p.A242	0.949	HMMPfam_AA_permease	HMMPfam_AA_permease	-	no_errors
ITGA6	3655	genome.wustl.edu	36	2	173060957	173060957	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	2	173060957	173060957	G	T	SNP	ITGA6	NM_001079818	human	genbank	54_36p	+1	reviewed	missense	c.2347	p.A783S	0.996	HMMPfam_Integrin_alpha2,superfamily_Integrin domains	superfamily_Integrin alpha N-terminal domain,HMMSmart_SM00191,HMMPfam_FG-GAP,HMMPfam_Integrin_alpha2,superfamily_Integrin domains,PatternScan_INTEGRIN_ALPHA	-	no_errors
CLK4	57396	genome.wustl.edu	36	5	177982874	177982874	+	Silent	SNP	T	T	C	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	T	T					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	5	177982874	177982874	T	C	SNP	CLK4	NM_020666	human	genbank	54_36p	-1	reviewed	silent	c.150	p.K50	0.894	NULL	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors
FAT1	2195	genome.wustl.edu	36	4	187771320	187771320	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	4	187771320	187771320	C	A	SNP	FAT1	NM_005245	human	genbank	54_36p	-1	reviewed	missense	c.9400	p.V3134L	0.997	superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like,HMMPfam_Cadherin	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112,superfamily_Concanavalin A-like lectins/glucanases,PatternScan_CADHERIN_1,HMMSmart_SM00181,superfamily_EGF/Laminin,HMMSmart_SM00282,HMMPfam_Laminin_G_2,HMMSmart_SM00179,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_EGF_CA,PatternScan_ASX_HYDROXYL	-	no_errors
LRRC33	375387	genome.wustl.edu	36	3	197872265	197872265	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	C	C					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	3	197872265	197872265	C	T	SNP	LRRC33	NM_198565	human	genbank	54_36p	+1	provisional	missense	c.1354	p.P452S	0.000	superfamily_SSF52058	superfamily_SSF52058,HMMPfam_LRR_1,HMMSmart_LRR_TYP	-	no_errors
DGKD	8527	genome.wustl.edu	36	2	233961746	233961746	+	Silent	SNP	G	G	T	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	2	233961746	233961746	G	T	SNP	DGKD	NM_152879	human	genbank	54_36p	+1	reviewed	silent	c.261	p.T87	0.481	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_Cysteine-rich domain,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,HMMPfam_DAGK_cat,HMMSmart_SM00046,HMMPfam_DAGK_acc,HMMSmart_SM00045,superfamily_SAM/Pointed domain,HMMSmart_SM00454,HMMPfam_SAM_2	-	no_errors
ENSG00000216102	0	genome.wustl.edu	36	19	9792254	9792261	+	RNA	DEL	ATATACAC	ATATACAC	-	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	ATATACAC	ATATACAC					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	19	9792254	9792261	ATATACAC	-	DEL	ENSG00000216102	ENST00000401283	human	ensembl	54_36p	+1	novel	rna	NULL	NULL	0.000:0.000:0.000:0.001:0.001:0.001:0.001:0.000	-	-	(deletion:rna[9792204,9792281])	no_errors
SLC30A5	64924	genome.wustl.edu	36	5	68459610	68459612	+	In_Frame_Del	DEL	ATC	ATC	-	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	ATC	ATC					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	5	68459610	68459612	ATC	-	DEL	SLC30A5	NM_022902	human	genbank	54_36p	+1	provisional	in_frame_del	c.2022_2024	p.S675in_frame_del	1.000:1.000:1.000	HMMPfam_Cation_efflux	HMMPfam_Cation_efflux	(deletion:cds_exon[68459587,68459715])	no_errors
SERPINA2	390502	genome.wustl.edu	36	14	93902401	93902401	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	G	G					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	14	93902401	93902401	G	-	DEL	SERPINA2	ENST00000238576	human	ensembl	54_36p	-1	known	frame_shift_del	c.379	p.L127fs	0.006	superfamily_Serpins,HMMPfam_Serpin,HMMSmart_SM00093	superfamily_Serpins,HMMPfam_Serpin,HMMSmart_SM00093	(deletion:cds_exon[93902129,93902563])	no_start_codon
SYNM	23336	genome.wustl.edu	36	15	97471421	97471423	+	In_Frame_Del	DEL	AGT	AGT	-	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	AGT	AGT					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	15	97471421	97471423	AGT	-	DEL	SYNM	ENST00000336292	human	ensembl	54_36p	+1	known	in_frame_del	c.910_912	p.S304in_frame_del	1.000:1.000:0.999	HMMPfam_Filament	HMMPfam_Filament,PatternScan_IF	(deletion:cds_exon[97471319,97471443])	no_errors
MFSD4	148808	genome.wustl.edu	36	1	203834929	203834930	+	Frame_Shift_Ins	INS	-	-	TTTG	novel	unknown	TCGA-61-1730-01A-01W-0639-09	TCGA-61-1730-11A-01W-0639-09	-	-					Unknown	Unknown	Somatic	4	Capture		1	dbGAP	Illumina GAIIx	7ea79695-b5ea-4754-8e1e-604be883d781	c144342d-3569-43ce-addc-7e977f91ff60	1	203834929	203834930	-	TTTG	INS	MFSD4	NM_181644	human	genbank	54_36p	+1	validated	frame_shift_ins	c.1416_1417	p.G473fs	1.000:1.000	superfamily_MFS_gen_substrate_transporter	superfamily_MFS_gen_substrate_transporter,HMMPfam_MFS_1	-	no_errors
