Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ABCA3	0	genome.wustl.edu	37	16	2336799	2336799	+	Silent	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	16	2336799	2336799	G	A	SNP	ABCA3	ENST00000301732	human	ensembl	74_37	-1	known	silent	c.3174	p.D1058	1.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA3	HGNC	ENSG00000167972				69	0	0.00	71	4	5.26
ABCB11	0	genome.wustl.edu	37	2	169842731	169842731	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	169842731	169842731	G	T	SNP	ABCB11	ENST00000263817	human	ensembl	74_37	-1	known	missense	c.972	p.F324L	0.998	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB11	HGNC	ENSG00000073734				59	0	0.00	47	3	6.00
ABCB6	0	genome.wustl.edu	37	2	220077768	220077768	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	220077768	220077768	C	T	SNP	ABCB6	ENST00000265316	human	ensembl	74_37	-1	known	missense	c.1825	p.V609M	0.716	superfamily_P-loop_NTPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB6	HGNC	ENSG00000115657				45	0	0.00	32	2	5.88
ABCC13	0	genome.wustl.edu	37	21	15659985	15659985	+	RNA	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	21	15659985	15659985	A	C	SNP	ABCC13	ENST00000482980	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.993	-	-	-	no_errors	ABCC13	HGNC	ENSG00000243064	tier1	-	-	58	0	0.00	35	26	42.62
ACSL1	0	genome.wustl.edu	37	4	185683562	185683562	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	4	185683562	185683562	G	T	SNP	ACSL1	ENST00000281455	human	ensembl	74_37	-1	known	missense	c.1637	p.P546Q	1.000	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSL1	HGNC	ENSG00000151726				67	0	0.00	32	4	11.11
ADAMTS9	0	genome.wustl.edu	37	3	64599178	64599178	+	Missense_Mutation	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	3	64599178	64599178	A	C	SNP	ADAMTS9	ENST00000498707	human	ensembl	74_37	-1	known	missense	c.3197	p.V1066G	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Pept_M12B_GON-ADAMTSs,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Pept_M12B_GON-ADAMTSs,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS9	HGNC	ENSG00000163638	tier1	-	-	77	0	0.00	22	14	38.89
ADCY6	0	genome.wustl.edu	37	12	49176989	49176989	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	12	49176989	49176989	C	T	SNP	ADCY6	ENST00000307885	human	ensembl	74_37	-1	known	missense	c.229	p.G77S	0.678	NULL	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY6	HGNC	ENSG00000174233	tier1	-	-	35	0	0.00	21	8	27.59
ADH7	0	genome.wustl.edu	37	4	100349749	100349749	+	Silent	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	4	100349749	100349749	C	T	SNP	ADH7	ENST00000209665	human	ensembl	74_37	-1	known	silent	c.195	p.V65	0.004	pfam_ADH_GroES-like,superfamily_GroES-like	pfam_ADH_GroES-like,pfam_ADH_C,superfamily_GroES-like	-	no_errors	ADH7	HGNC	ENSG00000196344				52	0	0.00	31	2	6.06
ALK	0	genome.wustl.edu	37	2	29451833	29451833	+	Missense_Mutation	SNP	T	T	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	29451833	29451833	T	C	SNP	ALK	ENST00000389048	human	ensembl	74_37	-1	known	missense	c.2732	p.K911R	1.000	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_MAM_dom,superfamily_Kinase-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_MAM_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ALK	HGNC	ENSG00000171094	tier1	-	-	107	0	0.00	61	18	22.78
ALK	0	genome.wustl.edu	37	2	29420535	29420535	+	Nonsense_Mutation	SNP	C	C	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	29420535	29420535	C	A	SNP	ALK	ENST00000389048	human	ensembl	74_37	-1	known	nonsense	c.3946	p.G1316*	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_MAM_dom,superfamily_Kinase-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_MAM_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ALK	HGNC	ENSG00000171094				32	0	0.00	37	5	11.90
ALPK3	0	genome.wustl.edu	37	15	85401174	85401174	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	15	85401174	85401174	C	T	SNP	ALPK3	ENST00000258888	human	ensembl	74_37	+1	known	missense	c.3811	p.L1271F	0.677	NULL	pfam_MHCK_EF2_kinase,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase,pfscan_Ig-like_dom	-	no_errors	ALPK3	HGNC	ENSG00000136383	tier1	-	-	104	0	0.00	65	10	13.33
ALS2CR11	0	genome.wustl.edu	37	2	202352531	202352531	+	Nonsense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	202352531	202352531	G	T	SNP	ALS2CR11	ENST00000286195	human	ensembl	74_37	-1	known	nonsense	c.1676	p.S559*	0.126	NULL	superfamily_C2_dom	-	no_errors	ALS2CR11	HGNC	ENSG00000155754	tier1	-	-	87	0	0.00	59	4	6.35
AMPD1	0	genome.wustl.edu	37	1	115229428	115229428	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	1	115229428	115229428	G	T	SNP	AMPD1	ENST00000520113	human	ensembl	74_37	-1	known	missense	c.418	p.P140T	1.000	pirsf_AMP_deaminase	pfam_A/AMP_deaminase_dom,pirsf_AMP_deaminase,tigrfam_AMP_deaminase	-	no_errors	AMPD1	HGNC	ENSG00000116748				90	0	0.00	51	3	5.56
ANGPTL2	0	genome.wustl.edu	37	9	129870853	129870853	+	Missense_Mutation	SNP	T	T	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	9	129870853	129870853	T	A	SNP	ANGPTL2	ENST00000373425	human	ensembl	74_37	-1	known	missense	c.158	p.K53M	1.000	NULL	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	-	no_errors	ANGPTL2	HGNC	ENSG00000136859	tier1	-	-	46	0	0.00	22	4	15.38
ANKRD28	0	genome.wustl.edu	37	3	15765924	15765924	+	Missense_Mutation	SNP	T	T	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	3	15765924	15765924	T	C	SNP	ANKRD28	ENST00000383777	human	ensembl	74_37	-1	known	missense	c.757	p.S253G	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD28	HGNC	ENSG00000206560	tier1	-	-	58	0	0.00	17	10	37.04
ANKRD36BP2	0	genome.wustl.edu	37	2	89104066	89104066	+	RNA	SNP	T	T	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	89104066	89104066	T	G	SNP	ANKRD36BP2	ENST00000393525	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	ANKRD36BP2	HGNC	ENSG00000230006	tier1	-	-	180	0	0.00	162	41	20.20
ANP32A	0	genome.wustl.edu	37	15	69080148	69080148	+	Silent	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	15	69080148	69080148	G	A	SNP	ANP32A	ENST00000465139	human	ensembl	74_37	-1	known	silent	c.165	p.T55	1.000	NULL	pfam_Leu-rich_rpt,smart_U2A'_phosphoprotein32A_C	-	no_errors	ANP32A	HGNC	ENSG00000140350	tier1	-	-	81	0	0.00	65	13	16.67
ANTXR2	0	genome.wustl.edu	37	4	80905107	80905107	+	Missense_Mutation	SNP	C	C	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	4	80905107	80905107	C	A	SNP	ANTXR2	ENST00000307333	human	ensembl	74_37	-1	known	missense	c.1104	p.L368F	0.375	pirsf_Anthrax_toxin_rcpt	pirsf_Anthrax_toxin_rcpt,pfam_Anthrax_toxin_rcpt_C,pfam_Anthrax_toxin_rcpt_extracel,pfam_VWF_A,superfamily_Ig_E-set,smart_VWF_A,pfscan_VWF_A	-	no_errors	ANTXR2	HGNC	ENSG00000163297				95	0	0.00	49	3	5.77
AOC1	0	genome.wustl.edu	37	7	150556986	150556986	+	RNA	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	7	150556986	150556986	G	A	SNP	AOC1	ENST00000480582	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.008	-	-	-	no_errors	AOC1	HGNC	ENSG00000002726	tier1	-	-	24	0	0.00	10	8	44.44
AOC3	0	genome.wustl.edu	37	17	41006518	41006518	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	17	41006518	41006518	C	T	SNP	AOC3	ENST00000308423	human	ensembl	74_37	+1	known	missense	c.1654	p.P552S	1.000	pfam_Cu_amine_oxidase_C,superfamily_Cu_amine_oxidase_C	pfam_Cu_amine_oxidase_C,pfam_Cu_amine_oxidase_N2,pfam_Cu_amine_oxidase_N3,superfamily_Cu_amine_oxidase_C,superfamily_Cu_amine_oxidase_N-reg,prints_Cu_amine_oxidase	-	no_errors	AOC3	HGNC	ENSG00000131471				95	0	0.00	73	4	5.19
AOX2P	0	genome.wustl.edu	37	2	201619757	201619758	+	RNA	INS	-	-	TG			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	201619757	201619758	-	TG	INS	AOX2P	ENST00000472376	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	AOX2P	HGNC	ENSG00000243478	tier1			16	0	0.00	12	3	20.00
ARPC5	0	genome.wustl.edu	37	1	183596623	183596623	+	RNA	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	1	183596623	183596623	C	T	SNP	ARPC5	ENST00000462965	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ARPC5	HGNC	ENSG00000162704	tier1	-	-	95	0	0.00	66	4	5.71
ARVCF	0	genome.wustl.edu	37	22	19960775	19960775	+	Frame_Shift_Del	DEL	C	C	-			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	22	19960775	19960775	C	-	DEL	ARVCF	ENST00000263207	human	ensembl	74_37	-1	known	frame_shift_del	c.2305	p.A769fs	0.989	superfamily_ARM-type_fold	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	ARVCF	HGNC	ENSG00000099889	tier1			47	0	0.00	24	2	7.69
ASNS	0	genome.wustl.edu	37	7	97493682	97493682	+	Missense_Mutation	SNP	G	G	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	7	97493682	97493682	G	C	SNP	ASNS	ENST00000175506	human	ensembl	74_37	-1	known	missense	c.376	p.L126V	1.000	pfam_GATase_dom,tigrfam_Asn_synth_AEB	pfam_Asn_synthase,pfam_GATase_dom,tigrfam_Asn_synth_AEB	-	no_errors	ASNS	HGNC	ENSG00000070669	tier1	-	-	52	0	0.00	38	4	9.52
ATP10A	0	genome.wustl.edu	37	15	25959376	25959376	+	Missense_Mutation	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	15	25959376	25959376	A	C	SNP	ATP10A	ENST00000356865	human	ensembl	74_37	-1	known	missense	c.1789	p.F597V	0.997	superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10A	HGNC	ENSG00000206190	tier1	-	-	82	0	0.00	45	13	22.41
ATP11B	0	genome.wustl.edu	37	3	182584151	182584151	+	Nonsense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	3	182584151	182584151	G	A	SNP	ATP11B	ENST00000323116	human	ensembl	74_37	+1	known	nonsense	c.1539	p.W513*	1.000	superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP11B	HGNC	ENSG00000058063	tier1	-	-	58	0	0.00	15	29	65.91
ATP13A2	0	genome.wustl.edu	37	1	17322367	17322368	+	RNA	INS	-	-	GCCA			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	1	17322367	17322368	-	GCCA	INS	ATP13A2	ENST00000502860	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	ATP13A2	HGNC	ENSG00000159363	tier1			88	0	0.00	46	8	14.81
ATP1A1	0	genome.wustl.edu	37	1	116944182	116944182	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	1	116944182	116944182	G	T	SNP	ATP1A1	ENST00000295598	human	ensembl	74_37	+1	known	missense	c.2856	p.K952N	1.000	pfam_ATPase_P-typ_cation-transptr_C,tigrfam_ATPase_P-typ_Na/K_IIC	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP1A1	HGNC	ENSG00000163399				77	0	0.00	41	3	6.82
ATRNL1	0	genome.wustl.edu	37	10	117059700	117059700	+	Silent	SNP	T	T	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	10	117059700	117059700	T	C	SNP	ATRNL1	ENST00000355044	human	ensembl	74_37	+1	known	silent	c.2572	p.L858	0.845	superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_Kelch_1,pfam_Kelch_2,pfam_Plexin_repeat,pfam_CUB_dom,pfam_EGF_extracell,superfamily_C-type_lectin_fold,superfamily_CUB_dom,superfamily_Plexin-like_fold,smart_EG-like_dom,smart_CUB_dom,smart_Plexin-like_fold,smart_C-type_lectin,smart_EGF_laminin,pfscan_CUB_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_C-type_lectin	-	no_errors	ATRNL1	HGNC	ENSG00000107518	tier1	-	-	73	0	0.00	35	14	28.57
ATXN1L	0	genome.wustl.edu	37	16	71885321	71885321	+	Missense_Mutation	SNP	A	A	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	16	71885321	71885321	A	G	SNP	ATXN1L	ENST00000427980	human	ensembl	74_37	+1	known	missense	c.1678	p.T560A	1.000	pfam_Ataxin-1_HBP1,superfamily_Ataxin-1_HBP1,smart_Ataxin_AXH_dom,pfscan_Ataxin-1_HBP1	pfam_Ataxin-1_HBP1,superfamily_Ataxin-1_HBP1,smart_Ataxin_AXH_dom,pfscan_Ataxin-1_HBP1	-	no_errors	ATXN1L	HGNC	ENSG00000224470	tier1	-	-	66	0	0.00	61	4	6.15
AVP	0	genome.wustl.edu	37	20	3063287	3063287	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	20	3063287	3063287	C	T	SNP	AVP	ENST00000380293	human	ensembl	74_37	-1	known	missense	c.484	p.D162N	0.130	NULL	pfam_Neurhyp_horm,superfamily_Neurhyp_horm,smart_Neurhyp_horm,pirsf_Neurhyp_horm,prints_Neurhyp_horm	-	no_errors	AVP	HGNC	ENSG00000101200	tier1	-	-	26	0	0.00	12	4	25.00
AZI2	0	genome.wustl.edu	37	3	28380096	28380096	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	3	28380096	28380096	C	T	SNP	AZI2	ENST00000479665	human	ensembl	74_37	-1	known	missense	c.227	p.R76Q	0.446	NULL	NULL	-	no_errors	AZI2	HGNC	ENSG00000163512	tier1	-	-	106	0	0.00	38	12	24.00
BFAR	0	genome.wustl.edu	37	16	14738314	14738314	+	Silent	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	16	14738314	14738314	C	T	SNP	BFAR	ENST00000261658	human	ensembl	74_37	+1	known	silent	c.111	p.C37	1.000	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	pfam_SAM_type1,pfam_Znf_C3HC4_RING-type,pfam_SAM_2,superfamily_SAM/pointed,smart_Znf_RING,smart_SAM,pfscan_SAM,pfscan_Znf_RING	-	no_errors	BFAR	HGNC	ENSG00000103429	tier1	-	-	72	0	0.00	68	4	5.56
BRINP1	0	genome.wustl.edu	37	9	121930039	121930039	+	Missense_Mutation	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	9	121930039	121930039	A	C	SNP	BRINP1	ENST00000265922	human	ensembl	74_37	-1	known	missense	c.1609	p.F537V	1.000	NULL	pfam_MACPF,smart_MACPF	-	no_errors	BRINP1	HGNC	ENSG00000078725	tier1	-	-	34	0	0.00	20	5	20.00
BRINP1	0	genome.wustl.edu	37	9	121930218	121930218	+	Missense_Mutation	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	9	121930218	121930218	A	C	SNP	BRINP1	ENST00000265922	human	ensembl	74_37	-1	known	missense	c.1430	p.F477C	1.000	NULL	pfam_MACPF,smart_MACPF	-	no_errors	BRINP1	HGNC	ENSG00000078725	tier1	-	-	22	0	0.00	10	11	52.38
C10orf12	0	genome.wustl.edu	37	10	98744778	98744778	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	10	98744778	98744778	C	T	SNP	C10orf12	ENST00000286067	human	ensembl	74_37	+1	known	missense	c.3631	p.R1211W	0.000	NULL	NULL	-	no_errors	C10orf12	HGNC	ENSG00000155640				38	0	0.00	24	2	7.69
C11orf34	0	genome.wustl.edu	37	11	112126167	112126167	+	Silent	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	112126167	112126167	G	T	SNP	C11orf34	ENST00000338832	human	ensembl	74_37	-1	known	silent	c.330	p.V110	0.000	NULL	NULL	-	no_errors	C11orf34	HGNC	ENSG00000188771	tier1	-	-	97	0	0.00	50	14	21.88
C2orf62	0	genome.wustl.edu	37	2	219227598	219227598	+	Silent	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	219227598	219227598	C	T	SNP	C2orf62	ENST00000289388	human	ensembl	74_37	+1	known	silent	c.603	p.T201	0.008	NULL	superfamily_cAMP_dep_PK_reg_su_I/II_a/b	-	no_errors	C2orf62	HGNC	ENSG00000158428	tier1	rs200618385	-	62	0	0.00	48	12	20.00
C3orf70	0	genome.wustl.edu	37	3	184870467	184870467	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	3	184870467	184870467	G	T	SNP	C3orf70	ENST00000335012	human	ensembl	74_37	-1	known	missense	c.145	p.H49N	1.000	NULL	NULL	-	no_errors	C3orf70	HGNC	ENSG00000187068	tier1	-	-	63	0	0.00	37	4	9.76
C5orf42	0	genome.wustl.edu	37	5	37176061	37176061	+	Silent	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	5	37176061	37176061	C	T	SNP	C5orf42	ENST00000425232	human	ensembl	74_37	-1	known	silent	c.5928	p.G1976	0.212	NULL	superfamily_Quino_amine_DH_bsu	-	no_errors	C5orf42	HGNC	ENSG00000197603				84	0	0.00	72	4	5.26
CACNA1B	0	genome.wustl.edu	37	9	140773593	140773593	+	Silent	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	9	140773593	140773593	G	A	SNP	CACNA1B	ENST00000371355	human	ensembl	74_37	+1	known	silent	c.372	p.T124	0.754	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_N_a1su,prints_PKD_2	-	no_errors	CACNA1B	HGNC	ENSG00000148408	tier1	-	-	65	0	0.00	40	14	25.45
CACNA1F	0	genome.wustl.edu	37	X	49069170	49069170	+	Missense_Mutation	SNP	T	T	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	X	49069170	49069170	T	C	SNP	CACNA1F	ENST00000376265	human	ensembl	74_37	-1	known	missense	c.3932	p.E1311G	1.000	pfam_Ion_trans_dom,pfam_PKD1_2_channel	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_L_a1su	-	no_errors	CACNA1F	HGNC	ENSG00000102001				35	0	0.00	34	4	10.53
CAPN5	0	genome.wustl.edu	37	11	76834840	76834840	+	Missense_Mutation	SNP	A	A	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	76834840	76834840	A	G	SNP	CAPN5	ENST00000278559	human	ensembl	74_37	+1	known	missense	c.1847	p.N616S	0.163	smart_C2_dom	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,pfam_C2_dom,superfamily_Calpain_domain_III,superfamily_C2_dom,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,smart_C2_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN5	HGNC	ENSG00000149260	tier1	-	-	34	0	0.00	9	7	43.75
CBFA2T3	0	genome.wustl.edu	37	16	88945691	88945691	+	Missense_Mutation	SNP	T	T	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	16	88945691	88945691	T	G	SNP	CBFA2T3	ENST00000268679	human	ensembl	74_37	-1	known	missense	c.1649	p.E550A	1.000	NULL	pfam_NHR2,pfam_TAFH_NHR1,pfam_Znf_MYND,smart_TAFH_NHR1,pfscan_TAFH_NHR1,pfscan_Znf_MYND,prints_ETO,prints_MTG16	-	no_errors	CBFA2T3	HGNC	ENSG00000129993	tier1	-	-	152	0	0.00	128	23	15.23
CBX4	0	genome.wustl.edu	37	17	77808433	77808433	+	Silent	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	17	77808433	77808433	G	A	SNP	CBX4	ENST00000269397	human	ensembl	74_37	-1	known	silent	c.1008	p.S336	0.000	NULL	pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,prints_Chromo_dom_subgr,pfscan_Chromo_domain/shadow	-	no_errors	CBX4	HGNC	ENSG00000141582				16	0	0.00	19	2	9.52
CCDC112	0	genome.wustl.edu	37	5	114632127	114632127	+	Frame_Shift_Del	DEL	T	T	-			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	5	114632127	114632127	T	-	DEL	CCDC112	ENST00000379611	human	ensembl	74_37	-1	known	frame_shift_del	c.114	p.Q38fs	1.000	NULL	superfamily_Homeodomain-like	-	no_errors	CCDC112	HGNC	ENSG00000164221	tier1			23	0	0.00	6	2	25.00
CCDC87	0	genome.wustl.edu	37	11	66360163	66360163	+	Silent	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	66360163	66360163	G	A	SNP	CCDC87	ENST00000333861	human	ensembl	74_37	-1	known	silent	c.324	p.N108	0.853	NULL	pfam_MAP65_Ase1_PRC1	-	no_errors	CCDC87	HGNC	ENSG00000182791				56	0	0.00	33	2	5.71
CDH18	0	genome.wustl.edu	37	5	19721575	19721575	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	5	19721575	19721575	C	T	SNP	CDH18	ENST00000274170	human	ensembl	74_37	-1	known	missense	c.524	p.G175D	1.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH18	HGNC	ENSG00000145526	tier1	-	-	43	0	0.00	44	10	18.52
CDH4	0	genome.wustl.edu	37	20	60427897	60427897	+	Missense_Mutation	SNP	C	C	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	20	60427897	60427897	C	G	SNP	CDH4	ENST00000360469	human	ensembl	74_37	+1	known	missense	c.820	p.R274G	0.998	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Cadherin/Desmocollin	-	no_errors	CDH4	HGNC	ENSG00000179242	tier1	-	-	38	0	0.00	45	5	10.00
CDH4	0	genome.wustl.edu	37	20	60427900	60427900	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	20	60427900	60427900	C	T	SNP	CDH4	ENST00000360469	human	ensembl	74_37	+1	known	missense	c.823	p.P275S	1.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Cadherin/Desmocollin	-	no_errors	CDH4	HGNC	ENSG00000179242	tier1	-	-	38	0	0.00	48	6	11.11
CDH4	0	genome.wustl.edu	37	20	60427902	60427902	+	Silent	SNP	T	T	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	20	60427902	60427902	T	C	SNP	CDH4	ENST00000360469	human	ensembl	74_37	+1	known	silent	c.825	p.P275	0.652	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Cadherin/Desmocollin	-	no_errors	CDH4	HGNC	ENSG00000179242	tier1	-	-	38	0	0.00	48	5	9.43
CDH6	0	genome.wustl.edu	37	5	31318054	31318054	+	Silent	SNP	C	C	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	5	31318054	31318054	C	A	SNP	CDH6	ENST00000514738	human	ensembl	74_37	+1	putative	silent	c.1740	p.S580	0.995	NULL	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH6	HGNC	ENSG00000113361	tier1	-	-	44	0	0.00	19	9	32.14
CDK12	0	genome.wustl.edu	37	17	37667841	37667841	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	17	37667841	37667841	G	T	SNP	CDK12	ENST00000447079	human	ensembl	74_37	+1	known	missense	c.2726	p.G909V	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK12	HGNC	ENSG00000167258	tier1	-	-	53	0	0.00	22	259	92.17
CELSR3	0	genome.wustl.edu	37	3	48690521	48690521	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	3	48690521	48690521	C	T	SNP	CELSR3	ENST00000544264	human	ensembl	74_37	-1	known	missense	c.5548	p.D1850N	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Cadherin,pfam_GPCR_2_secretin-like,pfam_Laminin_G,pfam_DUF3497,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR3	HGNC	ENSG00000008300	tier1	rs146491964	-	72	0	0.00	36	16	30.77
CENPF	0	genome.wustl.edu	37	1	214803990	214803990	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	1	214803990	214803990	G	T	SNP	CENPF	ENST00000366955	human	ensembl	74_37	+1	known	missense	c.1308	p.Q436H	0.999	NULL	pfam_Centromere_CenpF_N,pfam_Centromere_CenpF_leu-rich_rpt,pfam_CenpF/LEK1_Rb-prot-bd	-	no_errors	CENPF	HGNC	ENSG00000117724				32	0	0.00	25	2	7.41
CERS3	0	genome.wustl.edu	37	15	100996237	100996237	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	15	100996237	100996237	G	A	SNP	CERS3	ENST00000284382	human	ensembl	74_37	-1	known	missense	c.860	p.T287M	0.992	pirsf_Longevity_assurance_LAG1_LAC1,pfam_TLC-dom,smart_TLC-dom,pfscan_TLC-dom	pirsf_Longevity_assurance_LAG1_LAC1,pfam_TLC-dom,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,smart_TLC-dom,pfscan_TLC-dom,pfscan_Homeobox_dom	-	no_errors	CERS3	HGNC	ENSG00000154227				42	0	0.00	30	2	6.25
CES1	0	genome.wustl.edu	37	16	55860155	55860155	+	Nonsense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	16	55860155	55860155	G	A	SNP	CES1	ENST00000360526	human	ensembl	74_37	-1	known	nonsense	c.313	p.R105*	0.000	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AB_hydrolase_3	-	no_errors	CES1	HGNC	ENSG00000198848	tier1	rs5023780	-	196	0	0.00	159	32	16.75
CFDP1	0	genome.wustl.edu	37	16	75327732	75327732	+	RNA	DEL	A	A	-			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	16	75327732	75327732	A	-	DEL	CFDP1	ENST00000570103	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.940	-	-	-	no_errors	CFDP1	HGNC	ENSG00000153774	tier1			30	0	0.00	22	3	12.00
CHP2	0	genome.wustl.edu	37	16	23767039	23767039	+	Missense_Mutation	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	16	23767039	23767039	A	C	SNP	CHP2	ENST00000300113	human	ensembl	74_37	+1	known	missense	c.125	p.K42T	0.306	smart_EF_hand_dom,pfscan_EF_hand_dom	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CHP2	HGNC	ENSG00000166869	tier1	-	-	118	0	0.00	59	17	22.37
CHRNG	0	genome.wustl.edu	37	2	233404837	233404837	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	233404837	233404837	C	T	SNP	CHRNG	ENST00000389494	human	ensembl	74_37	+1	known	missense	c.191	p.S64F	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel	-	no_errors	CHRNG	HGNC	ENSG00000196811	tier1	-	-	65	0	0.00	51	21	29.17
CHST9	0	genome.wustl.edu	37	18	24496546	24496546	+	Missense_Mutation	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	18	24496546	24496546	A	C	SNP	CHST9	ENST00000284224	human	ensembl	74_37	-1	known	missense	c.1009	p.L337V	0.996	pfam_Sulfotransferase	pfam_Sulfotransferase	-	no_errors	CHST9	HGNC	ENSG00000154080	tier1	-	-	66	0	0.00	31	21	40.38
CNTNAP3	0	genome.wustl.edu	37	9	39171488	39171488	+	Missense_Mutation	SNP	G	G	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	9	39171488	39171488	G	C	SNP	CNTNAP3	ENST00000297668	human	ensembl	74_37	-1	known	missense	c.1211	p.A404G	0.950	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP3	HGNC	ENSG00000106714	tier1	-	-	176	0	0.00	167	30	15.08
CPSF3	0	genome.wustl.edu	37	2	9583646	9583646	+	Missense_Mutation	SNP	C	C	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	9583646	9583646	C	G	SNP	CPSF3	ENST00000238112	human	ensembl	74_37	+1	known	missense	c.1098	p.H366Q	0.987	pfam_Beta_Casp	pfam_CPSF73-100_C,pfam_Beta_Casp,pfam_Beta-lactamas-like,pfam_RMMBL,smart_Beta-lactamas-like	-	no_errors	CPSF3	HGNC	ENSG00000119203	tier1	-	-	68	0	0.00	44	11	20.00
CSMD1	0	genome.wustl.edu	37	8	2813255	2813255	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	8	2813255	2813255	C	T	SNP	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	missense	c.9853	p.A3285T	0.686	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117	tier1	-	-	62	0	0.00	49	18	26.87
CSMD2	0	genome.wustl.edu	37	1	34066300	34066300	+	RNA	SNP	A	A	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	1	34066300	34066300	A	G	SNP	CSMD2	ENST00000489419	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	CSMD2	HGNC	ENSG00000121904	tier1	-	-	13	0	0.00	0	5	100.00
CST1	0	genome.wustl.edu	37	20	23728462	23728462	+	Silent	SNP	T	T	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	20	23728462	23728462	T	C	SNP	CST1	ENST00000304749	human	ensembl	74_37	-1	known	silent	c.417	p.Q139	0.001	smart_Prot_inh_cystat	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	-	no_errors	CST1	HGNC	ENSG00000170373	tier1	-	-	70	0	0.00	36	18	33.33
CTNNA2	0	genome.wustl.edu	37	2	80646693	80646693	+	Silent	SNP	A	A	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	80646693	80646693	A	G	SNP	CTNNA2	ENST00000361291	human	ensembl	74_37	+1	known	silent	c.1359	p.Q453	0.997	pfam_Vinculin/catenin,superfamily_Vinculin/catenin	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin,prints_Vinculin	-	no_errors	CTNNA2	HGNC	ENSG00000066032	tier1	-	-	62	0	0.00	42	15	26.32
CTTNBP2	0	genome.wustl.edu	37	7	117358157	117358157	+	Missense_Mutation	SNP	T	T	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	7	117358157	117358157	T	C	SNP	CTTNBP2	ENST00000160373	human	ensembl	74_37	-1	known	missense	c.4661	p.D1554G	1.000	NULL	pfam_Cortactin-binding_p2_N,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	CTTNBP2	HGNC	ENSG00000077063	tier1	-	-	49	0	0.00	19	11	36.67
CXCR2P1	0	genome.wustl.edu	37	2	218925186	218925186	+	RNA	SNP	T	T	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	218925186	218925186	T	A	SNP	CXCR2P1	ENST00000439871	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CXCR2P1	HGNC	ENSG00000229754	tier1	-	-	54	0	0.00	45	15	25.00
CYP27B1	0	genome.wustl.edu	37	12	58160778	58160778	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	12	58160778	58160778	C	T	SNP	CYP27B1	ENST00000228606	human	ensembl	74_37	-1	known	missense	c.47	p.R16H	0.000	NULL	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP27B1	HGNC	ENSG00000111012				82	0	0.00	74	4	5.13
DCAF4L2	0	genome.wustl.edu	37	8	88885764	88885764	+	Missense_Mutation	SNP	A	A	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	8	88885764	88885764	A	G	SNP	DCAF4L2	ENST00000319675	human	ensembl	74_37	-1	known	missense	c.436	p.F146L	0.811	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF4L2	HGNC	ENSG00000176566	tier1	-	-	33	0	0.00	41	8	16.33
DCDC1	0	genome.wustl.edu	37	11	30926625	30926625	+	Missense_Mutation	SNP	T	T	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	30926625	30926625	T	G	SNP	DCDC1	ENST00000339794	human	ensembl	74_37	-1	known	missense	c.1428	p.Q476H	0.000	NULL	pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,pfscan_Doublecortin_dom,pfscan_Ricin_B_lectin	-	no_errors	DCDC1	HGNC	ENSG00000170959	tier1	-	-	75	0	0.00	21	30	58.82
DCP1B	0	genome.wustl.edu	37	12	2062350	2062350	+	Missense_Mutation	SNP	C	C	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	12	2062350	2062350	C	G	SNP	DCP1B	ENST00000280665	human	ensembl	74_37	-1	known	missense	c.756	p.Q252H	0.000	NULL	pfam_DCP1	-	no_errors	DCP1B	HGNC	ENSG00000151065				40	0	0.00	33	2	5.71
DDX11	0	genome.wustl.edu	37	12	31242027	31242027	+	Missense_Mutation	SNP	A	A	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	12	31242027	31242027	A	T	SNP	DDX11	ENST00000407793	human	ensembl	74_37	+1	known	missense	c.734	p.E245V	1.000	pfam_DEAD_2,superfamily_P-loop_NTPase,smart_Helicase-like_DEXD_c2,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3,tigrfam_DNA_helicase_DNA-repair_Rad3	pfam_DEAD_2,superfamily_P-loop_NTPase,smart_Helicase-like_DEXD_c2,smart_ATP-dep_Helicase_C,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3,tigrfam_DNA_helicase_DNA-repair_Rad3	-	no_errors	DDX11	HGNC	ENSG00000013573	tier1	-	-	203	0	0.00	121	38	23.90
DDX17	0	genome.wustl.edu	37	22	38894489	38894489	+	Missense_Mutation	SNP	C	C	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	22	38894489	38894489	C	A	SNP	DDX17	ENST00000396821	human	ensembl	74_37	-1	known	missense	c.628	p.D210Y	1.000	pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX17	HGNC	ENSG00000100201	tier1	-	-	61	0	0.00	37	4	9.76
DDX51	0	genome.wustl.edu	37	12	132624261	132624261	+	Silent	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	12	132624261	132624261	C	T	SNP	DDX51	ENST00000397333	human	ensembl	74_37	-1	known	silent	c.1893	p.R631	0.985	pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DDX51	HGNC	ENSG00000185163	tier1	-	-	44	0	0.00	17	3	15.00
DEC1	0	genome.wustl.edu	37	9	118163485	118163485	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	9	118163485	118163485	C	T	SNP	DEC1	ENST00000374016	human	ensembl	74_37	+1	known	missense	c.101	p.A34V	0.000	NULL	NULL	-	no_errors	DEC1	HGNC	ENSG00000173077	tier1	-	-	45	0	0.00	43	4	8.51
DERL2	0	genome.wustl.edu	37	17	5389414	5389414	+	Missense_Mutation	SNP	G	G	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	17	5389414	5389414	G	C	SNP	DERL2	ENST00000158771	human	ensembl	74_37	-1	known	missense	c.68	p.A23G	1.000	pfam_DER1	pfam_DER1	-	no_errors	DERL2	HGNC	ENSG00000072849	tier1	-	-	27	0	0.00	25	6	19.35
DGCR5	0	genome.wustl.edu	37	22	18979584	18979584	+	RNA	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	22	18979584	18979584	G	T	SNP	DGCR5	ENST00000438934	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.008	-	-	-	no_errors	DGCR5	HGNC	ENSG00000237517	tier1	-	-	29	0	0.00	11	3	21.43
DIO3OS	0	genome.wustl.edu	37	14	102026512	102026512	+	RNA	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	14	102026512	102026512	G	A	SNP	DIO3OS	ENST00000554735	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	DIO3OS	HGNC	ENSG00000258498	tier1	-	-	76	0	0.00	40	11	21.57
DIP2C	0	genome.wustl.edu	37	10	390977	390979	+	In_Frame_Del	DEL	GCC	GCC	-			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	GCC	GCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	10	390977	390979	GCC	-	DEL	DIP2C	ENST00000280886	human	ensembl	74_37	-1	known	in_frame_del	c.3305_3303	p.A1102in_frame_del	0.979:0.971:0.194	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig,pfam_DMAP1-bd	-	no_errors	DIP2C	HGNC	ENSG00000151240	tier1			52	0	0.00	28	3	9.68
DLC1	0	genome.wustl.edu	37	8	12957567	12957567	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	8	12957567	12957567	G	A	SNP	DLC1	ENST00000276297	human	ensembl	74_37	-1	known	missense	c.2279	p.T760M	0.984	NULL	pfam_START_lipid-bd_dom,pfam_RhoGAP_dom,pfam_SAM_2,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,smart_START_lipid-bd_dom,pfscan_START_lipid-bd_dom,pfscan_RhoGAP_dom	-	no_errors	DLC1	HGNC	ENSG00000164741	tier1	rs144923726	-	35	0	0.00	42	10	19.23
DLX4	0	genome.wustl.edu	37	17	48051224	48051224	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	17	48051224	48051224	C	T	SNP	DLX4	ENST00000240306	human	ensembl	74_37	+1	known	missense	c.640	p.P214S	0.931	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa,pfscan_Homeobox_dom	-	no_errors	DLX4	HGNC	ENSG00000108813	tier1	-	-	58	0	0.00	50	4	7.41
DMAP1	0	genome.wustl.edu	37	1	44680454	44680454	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	1	44680454	44680454	C	T	SNP	DMAP1	ENST00000315913	human	ensembl	74_37	+1	known	missense	c.277	p.R93W	0.999	NULL	pfam_DMAP1,superfamily_Homeodomain-like	-	no_errors	DMAP1	HGNC	ENSG00000178028				59	0	0.00	43	3	6.52
DMBT1	0	genome.wustl.edu	37	10	124358439	124358439	+	Missense_Mutation	SNP	T	T	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	10	124358439	124358439	T	C	SNP	DMBT1	ENST00000338354	human	ensembl	74_37	+1	known	missense	c.3106	p.C1036R	1.000	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR	pfam_SRCR,pfam_CUB_dom,pfam_ZP_dom,superfamily_Srcr_rcpt-rel,superfamily_CUB_dom,smart_Srcr_rcpt-rel,smart_CUB_dom,smart_ZP_dom,pfscan_CUB_dom,pfscan_SRCR,pfscan_ZP_dom,prints_SRCR	-	no_errors	DMBT1	HGNC	ENSG00000187908	tier1	-	-	224	0	0.00	112	71	38.80
DMC1	0	genome.wustl.edu	37	22	38934571	38934571	+	Missense_Mutation	SNP	A	A	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	22	38934571	38934571	A	T	SNP	DMC1	ENST00000216024	human	ensembl	74_37	-1	known	missense	c.633	p.H211Q	1.000	pfam_DNA_recomb/repair_Rad51_C,pfam_DNA_recomb/repair_RecA,pfam_Circ_KaiC/RadA,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pirsf_DNA_recomb/repair_RecA-like,pfscan_DNA_recomb_RecA/RadB_ATP-bd,tigrfam_DMC1_rcmbase	pfam_DNA_recomb/repair_Rad51_C,pfam_DNA_recomb/repair_RecA,pfam_Circ_KaiC/RadA,superfamily_P-loop_NTPase,superfamily_DNA_repair_Rad51/TF_NusA_a-hlx,smart_AAA+_ATPase,pirsf_DNA_recomb/repair_RecA-like,pfscan_DNA_recomb_RecA/RadB_ATP-bd,pfscan_RecA_monomer-monomer_interface,tigrfam_DMC1_rcmbase	-	no_errors	DMC1	HGNC	ENSG00000100206				39	0	0.00	22	2	8.33
DNAH14	0	genome.wustl.edu	37	1	225328714	225328714	+	Missense_Mutation	SNP	A	A	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	1	225328714	225328714	A	G	SNP	DNAH14	ENST00000430092	human	ensembl	74_37	+1	known	missense	c.4448	p.E1483G	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,superfamily_P-loop_NTPase,superfamily_Tautomerase/MIF_sf,smart_AAA+_ATPase	-	no_errors	DNAH14	HGNC	ENSG00000185842	tier1	-	-	44	0	0.00	32	5	13.51
DNAJC8	0	genome.wustl.edu	37	1	28536712	28536713	+	RNA	INS	-	-	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	1	28536712	28536713	-	A	INS	DNAJC8	ENST00000482674	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	DNAJC8	HGNC	ENSG00000126698	tier1			18	0	0.00	17	2	10.53
DNTTIP2	0	genome.wustl.edu	37	1	94343366	94343366	+	Missense_Mutation	SNP	T	T	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	1	94343366	94343366	T	C	SNP	DNTTIP2	ENST00000436063	human	ensembl	74_37	-1	known	missense	c.125	p.D42G	0.000	NULL	pfam_Fcf2	-	no_errors	DNTTIP2	HGNC	ENSG00000067334	tier1	-	-	44	0	0.00	33	4	10.81
DSG1	0	genome.wustl.edu	37	18	28934711	28934711	+	Missense_Mutation	SNP	T	T	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	18	28934711	28934711	T	A	SNP	DSG1	ENST00000257192	human	ensembl	74_37	+1	known	missense	c.2552	p.V851E	0.751	NULL	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Desmoglein,prints_Cadherin,prints_Desmosomal_cadherin	-	no_errors	DSG1	HGNC	ENSG00000134760	tier1	-	-	37	0	0.00	35	4	10.26
DSP	0	genome.wustl.edu	37	6	7585192	7585192	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	6	7585192	7585192	G	A	SNP	DSP	ENST00000379802	human	ensembl	74_37	+1	known	missense	c.7697	p.G2566D	0.998	NULL	pfam_Plectin_repeat,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	DSP	HGNC	ENSG00000096696	tier1	-	-	58	0	0.00	34	8	19.05
DUS2	0	genome.wustl.edu	37	16	68104087	68104087	+	Missense_Mutation	SNP	C	C	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	16	68104087	68104087	C	G	SNP	DUS2	ENST00000358896	human	ensembl	74_37	+1	known	missense	c.605	p.A202G	1.000	pfam_tRNA_hU_synthase	pfam_tRNA_hU_synthase,pfam_dsRNA-bd_dom,smart_dsRNA-bd_dom	-	no_errors	DUS2	HGNC	ENSG00000167264	tier1	-	-	80	0	0.00	54	10	15.62
DVL3	0	genome.wustl.edu	37	3	183887840	183887840	+	Silent	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	3	183887840	183887840	C	T	SNP	DVL3	ENST00000313143	human	ensembl	74_37	+1	known	silent	c.1545	p.A515	0.996	pfam_Dishevelled_C-dom	pfam_Dishevelled_C-dom,pfam_DIX,pfam_Dishevelled_protein_dom,pfam_PDZ,pfam_DEP_dom,superfamily_PDZ,smart_DIX,smart_PDZ,smart_DEP_dom,pfscan_DEP_dom,pfscan_DIX,pfscan_PDZ,prints_Dishevelled_fam,prints_Dishevelled_3	-	no_errors	DVL3	HGNC	ENSG00000161202				48	0	0.00	29	2	6.45
DYNC1LI2	0	genome.wustl.edu	37	16	66761667	66761667	+	Missense_Mutation	SNP	C	C	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	16	66761667	66761667	C	A	SNP	DYNC1LI2	ENST00000258198	human	ensembl	74_37	-1	known	missense	c.1185	p.Q395H	1.000	pfam_Dynein_light_int_chain	pfam_Dynein_light_int_chain,superfamily_P-loop_NTPase	-	no_errors	DYNC1LI2	HGNC	ENSG00000135720	tier1	-	-	97	0	0.00	60	4	6.25
DYNC2H1	0	genome.wustl.edu	37	11	103092764	103092764	+	Missense_Mutation	SNP	T	T	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	103092764	103092764	T	G	SNP	DYNC2H1	ENST00000398093	human	ensembl	74_37	+1	known	missense	c.9113	p.L3038R	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DYNC2H1	HGNC	ENSG00000187240	tier1	-	-	116	0	0.00	49	38	43.18
ECE2	0	genome.wustl.edu	37	3	184005669	184005669	+	Silent	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	3	184005669	184005669	C	T	SNP	ECE2	ENST00000402825	human	ensembl	74_37	+1	known	silent	c.1662	p.D554	0.972	pfam_Peptidase_M13_N	pfam_Peptidase_M13_N,pfam_Peptidase_M13_C,pfam_Methyltransf_11,prints_Peptidase_M13_C	-	no_errors	ECE2	HGNC	ENSG00000145194	tier1	-	-	52	0	0.00	31	15	32.61
ECHDC1	0	genome.wustl.edu	37	6	127652116	127652116	+	Missense_Mutation	SNP	G	G	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	6	127652116	127652116	G	C	SNP	ECHDC1	ENST00000531967	human	ensembl	74_37	-1	known	missense	c.76	p.Q26E	0.042	NULL	pfam_Crotonase_core_superfam	-	no_errors	ECHDC1	HGNC	ENSG00000093144	tier1	-	-	41	0	0.00	55	8	12.70
EHD3	0	genome.wustl.edu	37	2	31457626	31457626	+	Missense_Mutation	SNP	T	T	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	31457626	31457626	T	C	SNP	EHD3	ENST00000322054	human	ensembl	74_37	+1	known	missense	c.139	p.S47P	1.000	superfamily_P-loop_NTPase	pfam_Dynamin_GTPase,superfamily_P-loop_NTPase,smart_EPS15_homology,pfscan_EF_hand_dom,pfscan_EPS15_homology	-	no_errors	EHD3	HGNC	ENSG00000013016	tier1	-	-	110	0	0.00	57	18	24.00
EHD4	0	genome.wustl.edu	37	15	42192879	42192879	+	Silent	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	15	42192879	42192879	G	A	SNP	EHD4	ENST00000220325	human	ensembl	74_37	-1	known	silent	c.1590	p.P530	0.886	smart_EPS15_homology,pfscan_EPS15_homology	pfam_Dynamin_GTPase,superfamily_P-loop_NTPase,smart_EPS15_homology,pfscan_EF_hand_dom,pfscan_EPS15_homology	-	no_errors	EHD4	HGNC	ENSG00000103966	tier1	-	-	59	0	0.00	24	29	54.72
ENSG00000212025	0	genome.wustl.edu	37	2	34628756	34628756	+	RNA	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	34628756	34628756	A	C	SNP	ENSG00000212025	ENST00000390736	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.110	-	-	-	no_errors	AC011748.1	Clone_based_ensembl_gene	ENSG00000212025	tier1	-	-	36	0	0.00	24	15	38.46
ENSG00000212045	0	genome.wustl.edu	37	4	29751918	29751918	+	RNA	SNP	T	T	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	4	29751918	29751918	T	G	SNP	ENSG00000212045	ENST00000390756	human	ensembl	74_37	+1	novel	rna	NULL	NULL	1.000	-	-	-	no_errors	AC109351.1	Clone_based_ensembl_gene	ENSG00000212045	tier1	-	-	59	0	0.00	35	13	27.08
ENSG00000221101	0	genome.wustl.edu	37	6	87183251	87183251	+	RNA	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	6	87183251	87183251	A	C	SNP	ENSG00000221101	ENST00000408174	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.065	-	-	-	no_errors	AL391417.1	Clone_based_ensembl_gene	ENSG00000221101	tier1	-	-	123	0	0.00	140	40	22.22
ENSG00000221664	0	genome.wustl.edu	37	1	77857164	77857165	+	RNA	INS	-	-	TA			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	1	77857164	77857165	-	TA	INS	ENSG00000221664	ENST00000408737	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.989:0.989	-	-	-	no_errors	AC095030.1	Clone_based_ensembl_gene	ENSG00000221664	tier1			42	0	0.00	26	2	7.14
ENSG00000228980	0	genome.wustl.edu	37	3	109136844	109136844	+	RNA	SNP	T	T	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	3	109136844	109136844	T	G	SNP	ENSG00000228980	ENST00000489670	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-702L6.4	Clone_based_vega_gene	ENSG00000228980	tier1	-	-	33	0	0.00	5	5	50.00
ENSG00000230490	0	genome.wustl.edu	37	13	34013856	34013856	+	RNA	SNP	G	G	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	13	34013856	34013856	G	C	SNP	ENSG00000230490	ENST00000454681	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-141M1.3	Clone_based_vega_gene	ENSG00000230490	tier1	-	-	98	0	0.00	105	23	17.97
ENSG00000239922	0	genome.wustl.edu	37	3	147657892	147657892	+	RNA	SNP	A	A	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	3	147657892	147657892	A	G	SNP	ENSG00000239922	ENST00000467198	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-71N10.1	Clone_based_vega_gene	ENSG00000239922	tier1	-	-	58	0	0.00	36	12	25.00
ENSG00000244306	0	genome.wustl.edu	37	14	19856906	19856906	+	RNA	SNP	A	A	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	14	19856906	19856906	A	G	SNP	ENSG00000244306	ENST00000551334	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	CTD-2314B22.3	Clone_based_vega_gene	ENSG00000244306	tier1	-	-	84	0	0.00	62	10	13.89
ENSG00000251812	0	genome.wustl.edu	37	17	4089717	4089717	+	RNA	DEL	A	A	-			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	17	4089717	4089717	A	-	DEL	ENSG00000251812	ENST00000516003	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors	Y_RNA	RFAM	ENSG00000251812	tier1			20	0	0.00	17	3	15.00
ENSG00000254420	0	genome.wustl.edu	37	11	78154810	78154811	+	RNA	INS	-	-	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	78154810	78154811	-	A	INS	ENSG00000254420	ENST00000534168	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.247:0.000	-	-	-	no_errors	RP11-452H21.1	Clone_based_vega_gene	ENSG00000254420	tier1			40	0	0.00	27	3	10.00
ENSG00000265376	0	genome.wustl.edu	37	3	31203216	31203216	+	RNA	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	3	31203216	31203216	C	T	SNP	ENSG00000265376	ENST00000580653	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	hsa-mir-466	miRBase	ENSG00000265376	tier1	-	-	31	0	0.00	27	5	15.62
ENSG00000268400	0	genome.wustl.edu	37	19	7706941	7706941	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	19	7706941	7706941	G	A	SNP	ENSG00000268400	ENST00000598664	human	ensembl	74_37	+1	known	missense	c.73	p.V25I	0.921	NULL	NULL	-	no_errors	CTD-3214H19.4	Clone_based_vega_gene	ENSG00000268400	tier1	-	-	68	0	0.00	31	30	49.18
EPPK1	0	genome.wustl.edu	37	8	144945735	144945735	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	8	144945735	144945735	G	T	SNP	EPPK1	ENST00000525985	human	ensembl	74_37	-1	known	missense	c.1687	p.L563M	0.147	smart_Plectin_repeat	pfam_Plectin_repeat,smart_Plectin_repeat	-	no_errors	EPPK1	HGNC	ENSG00000227184				48	0	0.00	47	3	6.00
ERC2	0	genome.wustl.edu	37	3	55543118	55543118	+	RNA	SNP	T	T	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	3	55543118	55543118	T	G	SNP	ERC2	ENST00000486496	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	ERC2	HGNC	ENSG00000187672	tier1	-	-	47	0	0.00	15	7	31.82
ERCC6	0	genome.wustl.edu	37	10	50681583	50681583	+	Silent	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	10	50681583	50681583	G	T	SNP	ERCC6	ENST00000355832	human	ensembl	74_37	-1	known	silent	c.2649	p.L883	1.000	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ERCC6	HGNC	ENSG00000225830	tier1	-	-	64	0	0.00	34	4	10.53
EXOC1	0	genome.wustl.edu	37	4	56756523	56756523	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	4	56756523	56756523	G	T	SNP	EXOC1	ENST00000346134	human	ensembl	74_37	+1	known	missense	c.1510	p.D504Y	1.000	pfam_Exocyst_Exoc1/SEC3	pfam_Exocyst_Exoc1/SEC3	-	no_errors	EXOC1	HGNC	ENSG00000090989	tier1	-	-	72	0	0.00	56	4	6.67
FAH	0	genome.wustl.edu	37	15	80464492	80464493	+	Frame_Shift_Ins	INS	-	-	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	15	80464492	80464493	-	T	INS	FAH	ENST00000261755	human	ensembl	74_37	+1	known	frame_shift_ins	c.608_609	p.V206fs	1.000:1.000	pfam_Fumarylacetoacetase_C,superfamily_Fumarylacetoacetase_C-rel,tigrfam_Fumarylacetoacetase	pfam_Fumarylacetoacetase_C,pfam_Fumarylacetoacetase_N,superfamily_Fumarylacetoacetase_C-rel,superfamily_Fumarylacetoacetase_N,tigrfam_Fumarylacetoacetase	-	no_errors	FAH	HGNC	ENSG00000103876	tier1			59	0	0.00	33	14	29.79
FAM187B	0	genome.wustl.edu	37	19	35719356	35719356	+	Silent	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	19	35719356	35719356	G	T	SNP	FAM187B	ENST00000324675	human	ensembl	74_37	-1	known	silent	c.228	p.P76	0.000	NULL	NULL	-	no_errors	FAM187B	HGNC	ENSG00000177558				63	0	0.00	34	2	5.56
FAM8A1	0	genome.wustl.edu	37	6	17606169	17606169	+	Missense_Mutation	SNP	T	T	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	6	17606169	17606169	T	A	SNP	FAM8A1	ENST00000259963	human	ensembl	74_37	+1	known	missense	c.1022	p.V341E	1.000	pfam_RDD	pfam_RDD	-	no_errors	FAM8A1	HGNC	ENSG00000137414				66	0	0.00	66	4	5.71
FANCC	0	genome.wustl.edu	37	9	98011548	98011548	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	9	98011548	98011548	G	T	SNP	FANCC	ENST00000289081	human	ensembl	74_37	-1	known	missense	c.26	p.S9Y	0.062	pfam_Fanconi,pirsf_Fanconi	pfam_Fanconi,pirsf_Fanconi,prints_Fanconi	-	no_errors	FANCC	HGNC	ENSG00000158169	tier1	-	-	25	0	0.00	11	3	21.43
FANCD2	0	genome.wustl.edu	37	3	10127509	10127509	+	Missense_Mutation	SNP	C	C	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	3	10127509	10127509	C	G	SNP	FANCD2	ENST00000287647	human	ensembl	74_37	+1	known	missense	c.3238	p.Q1080E	0.002	NULL	superfamily_ARM-type_fold	-	no_errors	FANCD2	HGNC	ENSG00000144554	tier1	-	-	62	0	0.00	25	18	41.86
FANCM	0	genome.wustl.edu	37	14	45665547	45665547	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	14	45665547	45665547	G	T	SNP	FANCM	ENST00000267430	human	ensembl	74_37	+1	known	missense	c.5513	p.R1838I	0.957	superfamily_Restrct_endonuc-II-like,smart_ERCC4_domain	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Restrct_endonuc-II-like,superfamily_RuvA_2-like,smart_Helicase_ATP-bd,smart_Helicase_C,smart_ERCC4_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	FANCM	HGNC	ENSG00000187790	tier1	-	-	90	0	0.00	60	4	6.25
FAT3	0	genome.wustl.edu	37	11	92531706	92531706	+	Missense_Mutation	SNP	A	A	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	92531706	92531706	A	T	SNP	FAT3	ENST00000298047	human	ensembl	74_37	+1	known	missense	c.5527	p.T1843S	0.996	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323	tier1	-	-	47	0	0.00	36	14	28.00
FAT3	0	genome.wustl.edu	37	11	92600351	92600351	+	Missense_Mutation	SNP	A	A	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	92600351	92600351	A	G	SNP	FAT3	ENST00000298047	human	ensembl	74_37	+1	known	missense	c.12103	p.S4035G	1.000	smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323	tier1	-	-	27	0	0.00	15	4	21.05
FAT4	0	genome.wustl.edu	37	4	126411358	126411358	+	Missense_Mutation	SNP	A	A	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	4	126411358	126411358	A	G	SNP	FAT4	ENST00000394329	human	ensembl	74_37	+1	known	missense	c.13381	p.T4461A	0.737	smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159	tier1	-	-	54	0	0.00	17	12	41.38
FBXO7	0	genome.wustl.edu	37	22	32889259	32889259	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	22	32889259	32889259	G	A	SNP	FBXO7	ENST00000266087	human	ensembl	74_37	+1	known	missense	c.1135	p.D379N	1.000	superfamily_F-box_dom	pfam_FP_dom,pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO7	HGNC	ENSG00000100225	tier1	-	-	101	0	0.00	49	25	33.78
FGGY	0	genome.wustl.edu	37	1	59787277	59787277	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	1	59787277	59787277	C	T	SNP	FGGY	ENST00000303721	human	ensembl	74_37	+1	known	missense	c.56	p.T19I	1.000	pfam_Carb_kinase_FGGY_N,tigrfam_Carb_kinase_FGGY-rel	pfam_Carb_kinase_FGGY_C,pfam_Carb_kinase_FGGY_N,tigrfam_Carb_kinase_FGGY-rel	-	no_errors	FGGY	HGNC	ENSG00000172456	tier1	-	-	65	0	0.00	51	4	7.27
FKBP1C	0	genome.wustl.edu	37	6	63921604	63921604	+	Missense_Mutation	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	6	63921604	63921604	A	C	SNP	FKBP1C	ENST00000370659	human	ensembl	74_37	+1	known	missense	c.143	p.K48T	1.000	pfam_PPIase_FKBP_dom,pfscan_PPIase_FKBP_dom	pfam_PPIase_FKBP_dom,pfscan_PPIase_FKBP_dom	-	no_errors	FKBP1C	HGNC	ENSG00000198225	tier1	-	-	78	0	0.00	50	15	23.08
FLRT1	0	genome.wustl.edu	37	11	63885044	63885044	+	Silent	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	63885044	63885044	C	T	SNP	FLRT1	ENST00000246841	human	ensembl	74_37	+1	known	silent	c.1305	p.G435	0.000	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Leu-rich_rpt,pfam_LRR-contain_N,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_Fibronectin_type3	-	no_errors	FLRT1	HGNC	ENSG00000126500	tier1	-	-	25	0	0.00	3	18	85.71
FMN2	0	genome.wustl.edu	37	1	240601495	240601495	+	Missense_Mutation	SNP	T	T	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	1	240601495	240601495	T	G	SNP	FMN2	ENST00000319653	human	ensembl	74_37	+1	known	missense	c.5045	p.L1682R	1.000	smart_FH2_Formin	pfam_FH2_Formin,pfam_Formin_homology_1,smart_FH2_Formin,pfscan_DEP_dom	-	no_errors	FMN2	HGNC	ENSG00000155816	tier1	-	-	50	0	0.00	35	29	45.31
FMO4	0	genome.wustl.edu	37	1	171303708	171303708	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	1	171303708	171303708	G	T	SNP	FMO4	ENST00000367749	human	ensembl	74_37	+1	known	missense	c.986	p.G329V	1.000	pfam_Flavin_mOase-like,pirsf_DiMe-aniline_mOase,prints_Flavin_mOase	pfam_Flavin_mOase-like,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pirsf_DiMe-aniline_mOase,prints_Flavin_mOase,prints_Flavin_mOase_4,prints_Flavin_mOase_1,prints_Flavin_mOase_3	-	no_errors	FMO4	HGNC	ENSG00000076258				79	0	0.00	72	4	5.26
FNIP1	0	genome.wustl.edu	37	5	131034664	131034664	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	5	131034664	131034664	G	A	SNP	FNIP1	ENST00000510461	human	ensembl	74_37	-1	known	missense	c.1148	p.A383V	1.000	NULL	NULL	-	no_errors	FNIP1	HGNC	ENSG00000217128				55	0	0.00	31	2	6.06
FOLH1	0	genome.wustl.edu	37	11	49168407	49168407	+	Missense_Mutation	SNP	T	T	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	49168407	49168407	T	G	SNP	FOLH1	ENST00000256999	human	ensembl	74_37	-1	known	missense	c.2154	p.K718N	0.317	pfam_TFR-like_dimer_dom,superfamily_TFR-like_dimer_dom	pfam_TFR-like_dimer_dom,pfam_Protease-assoc_domain,pfam_Peptidase_M28,superfamily_TFR-like_dimer_dom	-	no_errors	FOLH1	HGNC	ENSG00000086205	tier1	-	-	112	0	0.00	53	16	23.19
GABRA6	0	genome.wustl.edu	37	5	161117260	161117260	+	Missense_Mutation	SNP	T	T	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	5	161117260	161117260	T	G	SNP	GABRA6	ENST00000274545	human	ensembl	74_37	+1	known	missense	c.727	p.F243V	1.000	superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,prints_Neur_channel,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAa_rcpt,prints_GABAA_rcpt,prints_GABBAa6_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRA6	HGNC	ENSG00000145863	tier1	-	-	88	0	0.00	33	18	35.29
GABRG1	0	genome.wustl.edu	37	4	46043126	46043126	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	4	46043126	46043126	G	T	SNP	GABRG1	ENST00000295452	human	ensembl	74_37	-1	known	missense	c.1277	p.S426Y	0.994	superfamily_Neurotrans-gated_channel_TM	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABBAg_rcpt,prints_GABAA_rcpt,prints_GABBAg1_rcpt,prints_GABAAa_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GABRG1	HGNC	ENSG00000163285	tier1	-	-	51	0	0.00	25	9	26.47
GALNT6	0	genome.wustl.edu	37	12	51748202	51748202	+	Silent	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	12	51748202	51748202	G	A	SNP	GALNT6	ENST00000356317	human	ensembl	74_37	-1	known	silent	c.1830	p.C610	0.995	pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT6	HGNC	ENSG00000139629	tier1	-	-	75	0	0.00	69	4	5.48
GAS2L2	0	genome.wustl.edu	37	17	34074129	34074129	+	Nonsense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	17	34074129	34074129	G	A	SNP	GAS2L2	ENST00000254466	human	ensembl	74_37	-1	known	nonsense	c.991	p.R331*	0.998	NULL	pfam_GAS2_dom,pfam_CH-domain,superfamily_CH-domain,superfamily_GAS2_dom,smart_CH-domain,smart_GAS2_dom,pfscan_CH-domain	-	no_errors	GAS2L2	HGNC	ENSG00000132139	tier1	rs139340113	-	105	0	0.00	63	28	30.77
GATAD2A	0	genome.wustl.edu	37	19	19613278	19613278	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	19	19613278	19613278	G	A	SNP	GATAD2A	ENST00000358713	human	ensembl	74_37	+1	known	missense	c.1714	p.V572M	0.000	NULL	pfam_Znf_GATA,pfscan_Znf_GATA	-	no_errors	GATAD2A	HGNC	ENSG00000167491	tier1	-	-	101	0	0.00	40	31	43.06
GCN1L1	0	genome.wustl.edu	37	12	120589038	120589038	+	Missense_Mutation	SNP	C	C	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	12	120589038	120589038	C	A	SNP	GCN1L1	ENST00000300648	human	ensembl	74_37	-1	known	missense	c.4220	p.G1407V	1.000	superfamily_ARM-type_fold	pfam_DUF3554,pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	GCN1L1	HGNC	ENSG00000089154	tier1	-	-	30	0	0.00	8	13	61.90
GEMIN4	0	genome.wustl.edu	37	17	649797	649797	+	Missense_Mutation	SNP	T	T	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	17	649797	649797	T	G	SNP	GEMIN4	ENST00000319004	human	ensembl	74_37	-1	known	missense	c.1486	p.N496H	1.000	NULL	NULL	-	no_errors	GEMIN4	HGNC	ENSG00000179409	tier1	-	-	55	0	0.00	31	8	20.51
GLI3	0	genome.wustl.edu	37	7	42004239	42004239	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	7	42004239	42004239	C	T	SNP	GLI3	ENST00000395925	human	ensembl	74_37	-1	known	missense	c.4432	p.E1478K	0.998	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI3	HGNC	ENSG00000106571	tier1	-	-	42	0	0.00	25	17	40.48
GLI3	0	genome.wustl.edu	37	7	42079837	42079837	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	7	42079837	42079837	G	T	SNP	GLI3	ENST00000395925	human	ensembl	74_37	-1	known	missense	c.828	p.S276R	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI3	HGNC	ENSG00000106571				40	0	0.00	38	2	5.00
GLIPR1	0	genome.wustl.edu	37	12	75875698	75875698	+	Missense_Mutation	SNP	C	C	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	12	75875698	75875698	C	A	SNP	GLIPR1	ENST00000266659	human	ensembl	74_37	+1	known	missense	c.259	p.H87N	0.000	pfam_CAP_domain,superfamily_CAP_domain,smart_Allrgn_V5/Tpx1	pfam_CAP_domain,superfamily_CAP_domain,smart_Allrgn_V5/Tpx1,prints_Allrgn_V5/Tpx1,prints_V5_allergen	-	no_errors	GLIPR1	HGNC	ENSG00000139278				73	0	0.00	42	3	6.67
GMNN	0	genome.wustl.edu	37	6	24780905	24780905	+	Silent	SNP	A	A	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	6	24780905	24780905	A	G	SNP	GMNN	ENST00000230056	human	ensembl	74_37	+1	known	silent	c.66	p.P22	0.999	pfam_Geminin_fam	pfam_Geminin_fam	-	no_errors	GMNN	HGNC	ENSG00000112312	tier1	-	-	50	0	0.00	49	5	9.26
GNAL	0	genome.wustl.edu	37	18	11876682	11876682	+	Frame_Shift_Del	DEL	T	T	-			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	18	11876682	11876682	T	-	DEL	GNAL	ENST00000334049	human	ensembl	74_37	+1	known	frame_shift_del	c.1225	p.L410fs	1.000	pfam_Gprotein_alpha_su,superfamily_P-loop_NTPase,smart_Gprotein_alpha_su,prints_Gprotein_alpha_S	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su,prints_Gprotein_alpha_S	-	no_errors	GNAL	HGNC	ENSG00000141404	tier1			108	0	0.00	33	2	5.71
GOLGA6L2	0	genome.wustl.edu	37	15	23686609	23686609	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	15	23686609	23686609	C	T	SNP	GOLGA6L2	ENST00000312015	human	ensembl	74_37	-1	known	missense	c.1013	p.R338Q	0.000	NULL	prints_Tropomyosin	-	no_errors	GOLGA6L2	HGNC	ENSG00000174450	tier1	-	-	133	0	0.00	105	33	23.91
GON4L	0	genome.wustl.edu	37	1	155734857	155734857	+	Silent	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	1	155734857	155734857	G	T	SNP	GON4L	ENST00000368331	human	ensembl	74_37	-1	known	silent	c.4407	p.T1469	1.000	NULL	pfam_PAH,superfamily_PAH,superfamily_Homeodomain-like,pfscan_Myb-like_dom	-	no_errors	GON4L	HGNC	ENSG00000116580	tier1	-	-	82	0	0.00	70	4	5.41
GPATCH2L	0	genome.wustl.edu	37	14	76620929	76620929	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	14	76620929	76620929	G	T	SNP	GPATCH2L	ENST00000261530	human	ensembl	74_37	+1	known	missense	c.223	p.D75Y	1.000	NULL	NULL	-	no_errors	GPATCH2L	HGNC	ENSG00000089916				33	0	0.00	29	2	6.45
GPLD1	0	genome.wustl.edu	37	6	24433598	24433598	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	6	24433598	24433598	G	T	SNP	GPLD1	ENST00000230036	human	ensembl	74_37	-1	known	missense	c.2378	p.S793Y	1.000	prints_Gprt_PLipase_D	pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Gprt_PLipase_D	-	no_errors	GPLD1	HGNC	ENSG00000112293	tier1	-	-	116	0	0.00	52	65	55.56
GPR26	0	genome.wustl.edu	37	10	125426536	125426536	+	Missense_Mutation	SNP	C	C	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	10	125426536	125426536	C	A	SNP	GPR26	ENST00000284674	human	ensembl	74_37	+1	known	missense	c.613	p.R205S	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR26	HGNC	ENSG00000154478				40	0	0.00	17	2	10.53
GPR98	0	genome.wustl.edu	37	5	90041004	90041004	+	Missense_Mutation	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	5	90041004	90041004	A	C	SNP	GPR98	ENST00000405460	human	ensembl	74_37	+1	known	missense	c.10691	p.N3564T	0.642	NULL	pfam_Calx_beta,pfam_EPTP,pfam_GPCR_2_secretin-like,pfam_GPS_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Gal_Oxase/kelch_b-propeller,smart_Calx_beta,pfscan_EAR,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR98	HGNC	ENSG00000164199	tier1	-	-	53	0	0.00	24	12	33.33
GRAMD1A	0	genome.wustl.edu	37	19	35514444	35514444	+	Missense_Mutation	SNP	T	T	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	19	35514444	35514444	T	C	SNP	GRAMD1A	ENST00000317991	human	ensembl	74_37	+1	known	missense	c.2075	p.L692P	1.000	NULL	pfam_GRAM,smart_GRAM	-	no_errors	GRAMD1A	HGNC	ENSG00000089351	tier1	-	-	33	0	0.00	32	4	11.11
GRIK2	0	genome.wustl.edu	37	6	102134068	102134068	+	Missense_Mutation	SNP	T	T	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	6	102134068	102134068	T	G	SNP	GRIK2	ENST00000421544	human	ensembl	74_37	+1	known	missense	c.791	p.L264R	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK2	HGNC	ENSG00000164418	tier1	-	-	50	0	0.00	43	7	14.00
GRM1	0	genome.wustl.edu	37	6	146720714	146720714	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	6	146720714	146720714	C	T	SNP	GRM1	ENST00000282753	human	ensembl	74_37	+1	known	missense	c.2539	p.R847C	1.000	pfscan_GPCR_3_C	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Metabotropic_Glu_rcpt_Homer-bd,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3_mtglu_rcpt_1,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_5	-	no_errors	GRM1	HGNC	ENSG00000152822	tier1	-	-	54	0	0.00	58	17	22.67
GRM4	0	genome.wustl.edu	37	6	34003813	34003813	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	6	34003813	34003813	G	A	SNP	GRM4	ENST00000374181	human	ensembl	74_37	-1	known	missense	c.2074	p.R692C	0.978	pfam_GPCR_3_C,pfscan_GPCR_3_C	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_4,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_GABA_rcpt_B	-	no_errors	GRM4	HGNC	ENSG00000124493	tier1	-	-	39	0	0.00	27	16	37.21
GRM5-AS1	0	genome.wustl.edu	37	11	88240956	88240956	+	RNA	DEL	T	T	-			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	88240956	88240956	T	-	DEL	GRM5-AS1	ENST00000526448	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.326	-	-	-	no_errors	GRM5-AS1	HGNC	ENSG00000255082	tier1			46	0	0.00	31	2	6.06
GUCY1B2	0	genome.wustl.edu	37	13	51594609	51594609	+	RNA	SNP	T	T	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	13	51594609	51594609	T	G	SNP	GUCY1B2	ENST00000389600	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	GUCY1B2	HGNC	ENSG00000123201	tier1	-	-	78	0	0.00	67	15	18.29
GYG2	0	genome.wustl.edu	37	X	2773102	2773102	+	Silent	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	X	2773102	2773102	G	A	SNP	GYG2	ENST00000381163	human	ensembl	74_37	+1	known	silent	c.486	p.P162	0.111	pfam_Glyco_trans_8	pfam_Glyco_trans_8	-	no_errors	GYG2	HGNC	ENSG00000056998	tier1	-	-	45	0	0.00	8	14	63.64
HADHB	0	genome.wustl.edu	37	2	26502881	26502881	+	Silent	SNP	A	A	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	26502881	26502881	A	G	SNP	HADHB	ENST00000317799	human	ensembl	74_37	+1	known	silent	c.831	p.K277	1.000	pfam_Thiolase_N,superfamily_Thiolase-like,tigrfam_Thiolase	pfam_Thiolase_N,pfam_Thiolase_C,pfam_Ketoacyl_synth_N,superfamily_Thiolase-like,tigrfam_Thiolase	-	no_errors	HADHB	HGNC	ENSG00000138029	tier1	-	-	40	0	0.00	26	11	29.73
HDAC10	0	genome.wustl.edu	37	22	50685323	50685323	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	22	50685323	50685323	G	T	SNP	HDAC10	ENST00000216271	human	ensembl	74_37	-1	known	missense	c.1495	p.L499M	0.017	NULL	pfam_His_deacetylse_dom,prints_His_deacetylse	-	no_errors	HDAC10	HGNC	ENSG00000100429	tier1	-	-	47	0	0.00	21	3	12.50
HGFAC	0	genome.wustl.edu	37	4	3443798	3443800	+	In_Frame_Del	DEL	CTG	CTG	-			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	CTG	CTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	4	3443798	3443800	CTG	-	DEL	HGFAC	ENST00000382774	human	ensembl	74_37	+1	known	in_frame_del	c.70_72	p.L27in_frame_del	0.997:0.997:0.998	pirsf_Coagulation_fac_XIIa/HGFA	pirsf_Coagulation_fac_XIIa/HGFA,pfam_Peptidase_S1,pfam_Kringle,pfam_FN_type2_col-bd,pfam_Fibronectin_type1,pfam_EG-like_dom,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_FN_type2_col-bd,smart_EG-like_dom,smart_Fibronectin_type1,smart_Kringle,smart_Peptidase_S1,pfscan_EG-like_dom,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Kringle,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	HGFAC	HGNC	ENSG00000109758	tier1			58	0	0.00	26	2	7.14
HIST1H1B	0	genome.wustl.edu	37	6	27834947	27834947	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	6	27834947	27834947	G	A	SNP	HIST1H1B	ENST00000331442	human	ensembl	74_37	-1	known	missense	c.361	p.P121S	1.000	NULL	pfam_Histone_H1/H5_H15,smart_Histone_H1/H5_H15,prints_Histone_H5	-	no_errors	HIST1H1B	HGNC	ENSG00000184357	tier1	-	-	67	0	0.00	60	15	20.00
HMBS	0	genome.wustl.edu	37	11	118962697	118962697	+	RNA	DEL	A	A	-			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	118962697	118962697	A	-	DEL	HMBS	ENST00000534956	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.013	-	-	-	no_errors	HMBS	HGNC	ENSG00000256269	tier1			22	0	0.00	6	5	45.45
HNF1A	0	genome.wustl.edu	37	12	121435510	121435510	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	12	121435510	121435510	G	T	SNP	HNF1A	ENST00000400024	human	ensembl	74_37	+1	known	missense	c.1543	p.G515C	0.000	NULL	pfam_HNF-1_N,pfam_HNF1b_C,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,superfamily_HNF1_dimer_dom,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	HNF1A	HGNC	ENSG00000135100	tier1	-	-	78	0	0.00	59	4	6.35
HNF4A	0	genome.wustl.edu	37	20	43048461	43048461	+	Silent	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	20	43048461	43048461	G	A	SNP	HNF4A	ENST00000316099	human	ensembl	74_37	+1	known	silent	c.837	p.L279	0.962	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_Str_hrmn_rcpt,prints_Retinoid-X_rcpt/HNF4	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_COUP_TF,prints_Retinoid-X_rcpt/HNF4	-	no_errors	HNF4A	HGNC	ENSG00000101076	tier1	-	-	43	0	0.00	58	4	6.45
HNRNPR	0	genome.wustl.edu	37	1	23636407	23636407	+	RNA	SNP	T	T	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	1	23636407	23636407	T	C	SNP	HNRNPR	ENST00000476660	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HNRNPR	HGNC	ENSG00000125944	tier1	-	-	66	0	0.00	51	4	7.27
HSP90AA4P	0	genome.wustl.edu	37	4	190395806	190395806	+	RNA	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	4	190395806	190395806	A	C	SNP	HSP90AA4P	ENST00000378770	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HSP90AA4P	HGNC	ENSG00000205100	tier1	-	-	67	0	0.00	18	16	47.06
ICAM1	0	genome.wustl.edu	37	19	10394884	10394884	+	Silent	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	19	10394884	10394884	G	A	SNP	ICAM1	ENST00000264832	human	ensembl	74_37	+1	known	silent	c.813	p.S271	0.009	NULL	pfam_ICAM_N,smart_Ig_sub,prints_ICAM_VCAM_N,prints_ICAM	-	no_errors	ICAM1	HGNC	ENSG00000090339	tier1	rs200759542	-	40	0	0.00	9	10	52.63
IGF2BP3	0	genome.wustl.edu	37	7	23391117	23391117	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	7	23391117	23391117	G	T	SNP	IGF2BP3	ENST00000258729	human	ensembl	74_37	-1	known	missense	c.490	p.P164T	0.038	NULL	pfam_KH_dom_type_1,pfam_RRM_dom,smart_RRM_dom,smart_KH_dom,pfscan_KH_dom_type_1,pfscan_RRM_dom	-	no_errors	IGF2BP3	HGNC	ENSG00000136231				47	0	0.00	31	2	6.06
IGFALS	0	genome.wustl.edu	37	16	1841564	1841564	+	Silent	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	16	1841564	1841564	C	T	SNP	IGFALS	ENST00000415638	human	ensembl	74_37	-1	known	silent	c.969	p.T323	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	IGFALS	HGNC	ENSG00000099769				52	0	0.00	35	2	5.41
IGHV1OR21-1	0	genome.wustl.edu	37	21	10862898	10862898	+	Missense_Mutation	SNP	A	A	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	21	10862898	10862898	A	T	SNP	IGHV1OR21-1	ENST00000559480	human	ensembl	74_37	+1	known	missense	c.194	p.E65V	1.000	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	IGHV1OR21-1	HGNC	ENSG00000169861	tier1	-	-	136	0	0.00	101	29	22.31
ILDR2	0	genome.wustl.edu	37	1	166908781	166908781	+	Missense_Mutation	SNP	A	A	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	1	166908781	166908781	A	T	SNP	ILDR2	ENST00000271417	human	ensembl	74_37	-1	known	missense	c.526	p.L176M	1.000	NULL	pfam_LISCH7,smart_Ig_sub	-	no_errors	ILDR2	HGNC	ENSG00000143195	tier1	-	-	62	0	0.00	36	4	10.00
INVS	0	genome.wustl.edu	37	9	103035315	103035315	+	Missense_Mutation	SNP	C	C	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	9	103035315	103035315	C	A	SNP	INVS	ENST00000262457	human	ensembl	74_37	+1	known	missense	c.1741	p.L581I	1.000	superfamily_P-loop_NTPase,pfscan_IQ_motif_EF-hand-BS	pfam_Ankyrin_rpt,pfam_IQ_motif_EF-hand-BS,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,smart_Ankyrin_rpt,smart_IQ_motif_EF-hand-BS,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS,prints_Ankyrin_rpt	-	no_errors	INVS	HGNC	ENSG00000119509	tier1	-	-	75	0	0.00	37	10	21.28
IP6K3	0	genome.wustl.edu	37	6	33694507	33694507	+	Splice_Site	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	6	33694507	33694507	C	T	SNP	IP6K3	ENST00000293756	human	ensembl	74_37	-1	known	splice_site	c.589+1	e3+1	1.000	-	-	-	no_errors	IP6K3	HGNC	ENSG00000161896	tier1	-	-	91	0	0.00	104	7	6.31
IPP	0	genome.wustl.edu	37	1	46184897	46184898	+	Frame_Shift_Del	DEL	AC	AC	-			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	1	46184897	46184898	AC	-	DEL	IPP	ENST00000396478	human	ensembl	74_37	-1	known	frame_shift_del	c.1164_1163	p.C388fs	1.000:1.000	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	IPP	HGNC	ENSG00000197429	tier1			41	0	0.00	25	2	7.41
IQGAP1	0	genome.wustl.edu	37	15	91019911	91019911	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	15	91019911	91019911	G	A	SNP	IQGAP1	ENST00000268182	human	ensembl	74_37	+1	known	missense	c.2801	p.S934N	1.000	NULL	pfam_RasGAP,pfam_RasGAP_C,pfam_IQ_motif_EF-hand-BS,pfam_CH-domain,pfam_WW_dom,superfamily_Rho_GTPase_activation_prot,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_WW_dom,smart_IQ_motif_EF-hand-BS,smart_RasGAP,pfscan_CH-domain,pfscan_IQ_motif_EF-hand-BS,pfscan_WW_dom,pfscan_RasGAP	-	no_errors	IQGAP1	HGNC	ENSG00000140575				104	0	0.00	78	5	6.02
IREB2	0	genome.wustl.edu	37	15	78783102	78783102	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	15	78783102	78783102	G	T	SNP	IREB2	ENST00000258886	human	ensembl	74_37	+1	known	missense	c.2323	p.G775C	1.000	pfam_AconitaseA/IPMdHydase_ssu_swvl,superfamily_Aconitase/3IPM_dehydase_swvl,tigrfam_Aconitase/Fe_reg_prot_2	pfam_Acoase/IPM_deHydtase_lsu_aba,pfam_AconitaseA/IPMdHydase_ssu_swvl,superfamily_Acoase/IPM_deHydtase_lsu_aba,superfamily_Aconitase/3IPM_dehydase_swvl,prints_Acoase/IPM_deHydtase_lsu_aba,tigrfam_Aconitase/Fe_reg_prot_2	-	no_errors	IREB2	HGNC	ENSG00000136381	tier1	-	-	48	0	0.00	44	4	8.33
IRS2	0	genome.wustl.edu	37	13	110436549	110436549	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	13	110436549	110436549	C	T	SNP	IRS2	ENST00000375856	human	ensembl	74_37	-1	known	missense	c.1852	p.A618T	0.886	NULL	pfam_Insln_rcpt_S1,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1,prints_Insln_rcpt_S1	-	no_errors	IRS2	HGNC	ENSG00000185950	tier1	-	-	21	0	0.00	12	3	20.00
IRX1	0	genome.wustl.edu	37	5	3600784	3600784	+	Silent	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	5	3600784	3600784	G	T	SNP	IRX1	ENST00000302006	human	ensembl	74_37	+1	known	silent	c.1374	p.P458	0.956	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,smart_Iroquois_homeo,pfscan_Homeobox_dom	-	no_errors	IRX1	HGNC	ENSG00000170549	tier1	-	-	80	0	0.00	40	37	48.05
ITGA6	0	genome.wustl.edu	37	2	173352291	173352291	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	173352291	173352291	G	A	SNP	ITGA6	ENST00000264106	human	ensembl	74_37	+1	known	missense	c.2294	p.C765Y	1.000	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA6	HGNC	ENSG00000091409	tier1	rs142894108	-	63	0	0.00	41	4	8.89
ITGAD	0	genome.wustl.edu	37	16	31408920	31408920	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	16	31408920	31408920	G	A	SNP	ITGAD	ENST00000389202	human	ensembl	74_37	+1	known	missense	c.245	p.R82H	0.277	NULL	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGAD	HGNC	ENSG00000156886	tier1	-	-	102	0	0.00	72	26	26.53
ITK	0	genome.wustl.edu	37	5	156608060	156608060	+	Silent	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	5	156608060	156608060	G	T	SNP	ITK	ENST00000422843	human	ensembl	74_37	+1	known	silent	c.72	p.S24	0.020	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_Znf_Btk_motif,pfam_SH3_domain,pfam_Pleckstrin_homology,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_Znf_Btk_motif,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_Znf_Btk_motif,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	ITK	HGNC	ENSG00000113263	tier1	-	-	50	0	0.00	43	4	8.51
KCTD16	0	genome.wustl.edu	37	5	143853531	143853531	+	Frame_Shift_Del	DEL	A	A	-			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	5	143853531	143853531	A	-	DEL	KCTD16	ENST00000507359	human	ensembl	74_37	+1	known	frame_shift_del	c.1141	p.A384fs	1.000	NULL	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	-	no_errors	KCTD16	HGNC	ENSG00000183775	tier1			55	0	0.00	50	5	9.09
KDELC2	0	genome.wustl.edu	37	11	108352842	108352842	+	Silent	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	108352842	108352842	G	T	SNP	KDELC2	ENST00000323468	human	ensembl	74_37	-1	known	silent	c.792	p.G264	1.000	pfam_LipoPS_modifying,smart_LipoPS_modifying	pfam_LipoPS_modifying,pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,smart_LipoPS_modifying,pfscan_Filamin/ABP280_repeat-like	-	no_errors	KDELC2	HGNC	ENSG00000178202	tier1	-	-	62	0	0.00	56	4	6.67
KDM2A	0	genome.wustl.edu	37	11	67023682	67023685	+	RNA	DEL	GGAG	GGAG	-			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	GGAG	GGAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	67023682	67023685	GGAG	-	DEL	KDM2A	ENST00000524657	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.010:0.034:0.048:0.412	-	-	-	no_errors	KDM2A	HGNC	ENSG00000173120	tier1			16	0	0.00	16	3	15.79
KDM4A	0	genome.wustl.edu	37	1	44137265	44137265	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	1	44137265	44137265	G	A	SNP	KDM4A	ENST00000372396	human	ensembl	74_37	+1	known	missense	c.1453	p.A485T	0.824	NULL	pfam_JmjC_dom,pfam_TF_JmjN,superfamily_Znf_FYVE_PHD,smart_TF_JmjN,smart_JmjC_dom,smart_Znf_PHD,smart_Tudor,pfscan_TF_JmjN,pfscan_JmjC_dom	-	no_errors	KDM4A	HGNC	ENSG00000066135	tier1	-	-	62	0	0.00	15	16	51.61
KHDRBS3	0	genome.wustl.edu	37	8	136619224	136619224	+	Silent	SNP	T	T	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	8	136619224	136619224	T	C	SNP	KHDRBS3	ENST00000355849	human	ensembl	74_37	+1	known	silent	c.834	p.A278	0.994	NULL	smart_KH_dom	-	no_errors	KHDRBS3	HGNC	ENSG00000131773	tier1	-	-	74	0	0.00	34	27	44.26
KIAA0754	0	genome.wustl.edu	37	1	39878348	39878348	+	Nonsense_Mutation	SNP	C	C	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	1	39878348	39878348	C	A	SNP	KIAA0754	ENST00000530275	human	ensembl	74_37	+1	known	nonsense	c.2003	p.S668*	0.001	NULL	NULL	-	no_errors	KIAA0754	HGNC	ENSG00000255103				33	0	0.00	11	2	15.38
KIAA0825	0	genome.wustl.edu	37	5	93800647	93800647	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	5	93800647	93800647	C	T	SNP	KIAA0825	ENST00000427991	human	ensembl	74_37	-1	known	missense	c.1990	p.E664K	1.000	NULL	NULL	-	no_errors	KIAA0825	HGNC	ENSG00000185261	tier1	-	-	113	0	0.00	45	26	36.62
KIAA1324	0	genome.wustl.edu	37	1	109730251	109730251	+	RNA	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	1	109730251	109730251	C	T	SNP	KIAA1324	ENST00000369938	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	KIAA1324	HGNC	ENSG00000116299	tier1	-	-	51	0	0.00	45	4	8.16
KIAA1432	0	genome.wustl.edu	37	9	5742916	5742916	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	9	5742916	5742916	G	A	SNP	KIAA1432	ENST00000418622	human	ensembl	74_37	+1	known	missense	c.712	p.D238N	1.000	superfamily_WD40_repeat_dom	pfam_Ribosome_control_1,superfamily_WD40_repeat_dom	-	no_errors	KIAA1432	HGNC	ENSG00000107036	tier1	-	-	120	0	0.00	67	4	5.63
KIAA2018	0	genome.wustl.edu	37	3	113377481	113377482	+	Frame_Shift_Ins	INS	-	-	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	3	113377481	113377482	-	T	INS	KIAA2018	ENST00000316407	human	ensembl	74_37	-1	known	frame_shift_ins	c.3048_3047	p.N1016fs	0.174:0.827	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	KIAA2018	HGNC	ENSG00000176542	tier1			23	0	0.00	23	4	14.81
KIF21B	0	genome.wustl.edu	37	1	200946364	200946364	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	1	200946364	200946364	G	A	SNP	KIF21B	ENST00000422435	human	ensembl	74_37	-1	known	missense	c.4301	p.A1434V	0.986	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_Kinesin_motor_dom,pfam_WD40_repeat,superfamily_P-loop_NTPase,superfamily_WD40_repeat_dom,superfamily_Prefoldin,smart_Kinesin_motor_dom,smart_WD40_repeat,pfscan_Kinesin_motor_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Kinesin_motor_dom	-	no_errors	KIF21B	HGNC	ENSG00000116852				44	0	0.00	30	2	6.25
KIF2B	0	genome.wustl.edu	37	17	51900497	51900497	+	Nonsense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	17	51900497	51900497	C	T	SNP	KIF2B	ENST00000268919	human	ensembl	74_37	+1	known	nonsense	c.103	p.Q35*	1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF2B	HGNC	ENSG00000141200	tier1	-	-	69	0	0.00	23	37	61.67
KIF2B	0	genome.wustl.edu	37	17	51900805	51900805	+	Missense_Mutation	SNP	C	C	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	17	51900805	51900805	C	A	SNP	KIF2B	ENST00000268919	human	ensembl	74_37	+1	known	missense	c.411	p.S137R	0.977	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF2B	HGNC	ENSG00000141200	tier1	-	-	30	0	0.00	18	5	21.74
KIF2B	0	genome.wustl.edu	37	17	51901908	51901908	+	Missense_Mutation	SNP	A	A	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	17	51901908	51901908	A	G	SNP	KIF2B	ENST00000268919	human	ensembl	74_37	+1	known	missense	c.1514	p.D505G	1.000	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,prints_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF2B	HGNC	ENSG00000141200	tier1	-	-	40	0	0.00	15	9	37.50
KLHL31	0	genome.wustl.edu	37	6	53516583	53516583	+	Nonsense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	6	53516583	53516583	C	T	SNP	KLHL31	ENST00000370905	human	ensembl	74_37	-1	known	nonsense	c.1718	p.W573*	1.000	smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_DUF1668_ORYSA,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL31	HGNC	ENSG00000124743	tier1	-	-	56	0	0.00	18	37	67.27
KRTAP9-4	0	genome.wustl.edu	37	17	39406094	39406094	+	Missense_Mutation	SNP	C	C	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	17	39406094	39406094	C	A	SNP	KRTAP9-4	ENST00000334109	human	ensembl	74_37	+1	known	missense	c.122	p.S41Y	0.009	NULL	NULL	-	no_errors	KRTAP9-4	HGNC	ENSG00000241595	tier1	-	-	118	0	0.00	1291	75	5.49
LAMA1	0	genome.wustl.edu	37	18	6995391	6995391	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	18	6995391	6995391	C	T	SNP	LAMA1	ENST00000389658	human	ensembl	74_37	-1	known	missense	c.4861	p.G1621S	0.009	pfam_Laminin_I	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_B_type_IV,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA1	HGNC	ENSG00000101680	tier1	-	-	85	0	0.00	14	10	41.67
LAMA1	0	genome.wustl.edu	37	18	7010314	7010314	+	Missense_Mutation	SNP	T	T	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	18	7010314	7010314	T	G	SNP	LAMA1	ENST00000389658	human	ensembl	74_37	-1	known	missense	c.3758	p.N1253T	0.995	pfam_Laminin_B_type_IV,smart_Laminin_B_subgr,pfscan_Laminin_B_type_IV	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_B_type_IV,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA1	HGNC	ENSG00000101680	tier1	-	-	69	0	0.00	11	11	50.00
LAYN	0	genome.wustl.edu	37	11	111414699	111414699	+	Missense_Mutation	SNP	A	A	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	111414699	111414699	A	G	SNP	LAYN	ENST00000375615	human	ensembl	74_37	+1	known	missense	c.161	p.Y54C	1.000	superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	LAYN	HGNC	ENSG00000204381	tier1	-	-	46	0	0.00	46	12	20.69
LCA5L	0	genome.wustl.edu	37	21	40800302	40800302	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	21	40800302	40800302	G	A	SNP	LCA5L	ENST00000288350	human	ensembl	74_37	-1	known	missense	c.118	p.R40W	0.000	NULL	NULL	-	no_errors	LCA5L	HGNC	ENSG00000157578	tier1	-	-	38	0	0.00	18	8	30.77
LCOR	0	genome.wustl.edu	37	10	98715673	98715673	+	Missense_Mutation	SNP	C	C	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	10	98715673	98715673	C	A	SNP	LCOR	ENST00000356016	human	ensembl	74_37	+1	known	missense	c.1296	p.N432K	0.964	NULL	pfam_HTH_Psq,superfamily_Homeodomain-like,pfscan_HTH_Psq	-	no_errors	LCOR	HGNC	ENSG00000196233				43	0	0.00	26	2	7.14
LCP2	0	genome.wustl.edu	37	5	169695469	169695470	+	Frame_Shift_Ins	INS	-	-	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	5	169695469	169695470	0	C	INS	LCP2	ENST00000046794	human	ensembl	74_37	-1	known	frame_shift_ins	c.541_540	p.K180fs	0.099:0.088	NULL	pfam_SH2,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,smart_SH2,pfscan_SH2	-	no_errors	LCP2	HGNC	ENSG00000043462				57	0	0.00	52	6	10.34
LCT	0	genome.wustl.edu	37	2	136567304	136567304	+	Silent	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	136567304	136567304	A	C	SNP	LCT	ENST00000264162	human	ensembl	74_37	-1	known	silent	c.2613	p.T871	0.000	NULL	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_1	-	no_errors	LCT	HGNC	ENSG00000115850	tier1	-	-	63	0	0.00	40	7	14.89
LEF1	0	genome.wustl.edu	37	4	108969352	108969353	+	RNA	INS	-	-	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	4	108969352	108969353	-	A	INS	LEF1	ENST00000503879	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.813:0.534	-	-	-	no_errors	LEF1	HGNC	ENSG00000138795	tier1			47	0	0.00	23	4	14.81
LMF2	0	genome.wustl.edu	37	22	50942069	50942069	+	Nonsense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	22	50942069	50942069	C	T	SNP	LMF2	ENST00000474879	human	ensembl	74_37	-1	known	nonsense	c.1875	p.W625*	0.425	NULL	pfam_LMF	-	no_errors	LMF2	HGNC	ENSG00000100258	tier1	-	-	83	0	0.00	55	22	28.57
LMO1	0	genome.wustl.edu	37	11	8248574	8248574	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	8248574	8248574	G	A	SNP	LMO1	ENST00000335790	human	ensembl	74_37	-1	known	missense	c.313	p.R105W	1.000	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	LMO1	HGNC	ENSG00000166407	tier1	-	-	62	0	0.00	28	10	26.32
LMO7	0	genome.wustl.edu	37	13	76195835	76195835	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	13	76195835	76195835	G	T	SNP	LMO7	ENST00000357063	human	ensembl	74_37	+1	known	missense	c.6	p.K2N	0.007	NULL	pfam_CH-domain,pfam_PDZ,superfamily_CH-domain,superfamily_PDZ,smart_CH-domain,smart_PDZ,pfscan_CH-domain,pfscan_PDZ,prints_SM22_calponin	-	no_errors	LMO7	HGNC	ENSG00000136153				40	0	0.00	30	2	6.25
LMX1B	0	genome.wustl.edu	37	9	129453223	129453223	+	Silent	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	9	129453223	129453223	G	T	SNP	LMX1B	ENST00000355497	human	ensembl	74_37	+1	known	silent	c.435	p.V145	1.000	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_LIM,smart_Homeobox_dom,pfscan_Znf_LIM,pfscan_Homeobox_dom	-	no_errors	LMX1B	HGNC	ENSG00000136944	tier1	-	-	88	0	0.00	75	4	5.06
LOC100631378	0	genome.wustl.edu	37	19	38315139	38315139	+	RNA	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	19	38315139	38315139	A	C	SNP	LOC100631378	ENST00000592640	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC016582.2	Clone_based_vega_gene	ENSG00000225868	tier1	-	-	89	0	0.00	45	22	32.84
LOC100996735	0	genome.wustl.edu	37	1	148951504	148951504	+	RNA	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	1	148951504	148951504	G	A	SNP	LOC100996735	ENST00000452399	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.373	-	-	-	no_errors	RP11-14N7.2	Clone_based_vega_gene	ENSG00000232527				21	0	0.00	22	3	12.00
LOC440518	0	genome.wustl.edu	37	19	22786284	22786284	+	RNA	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	19	22786284	22786284	G	T	SNP	LOC440518	ENST00000600260	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.034	-	-	-	no_errors	CTC-457E21.3	Clone_based_vega_gene	ENSG00000269332	tier1	-	-	16	0	0.00	11	4	26.67
LOC441666	0	genome.wustl.edu	37	10	42832819	42832819	+	RNA	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	10	42832819	42832819	G	A	SNP	LOC441666	ENST00000609841	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-313J2.1	Clone_based_vega_gene	ENSG00000215146	tier1	-	-	103	0	0.00	30	61	67.03
LOXL2	0	genome.wustl.edu	37	8	23155563	23155563	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	8	23155563	23155563	G	T	SNP	LOXL2	ENST00000389131	human	ensembl	74_37	-1	known	missense	c.2318	p.P773Q	0.001	NULL	pfam_Lysyl_oxidase,pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_Lysyl_oxidase,prints_SRCR	-	no_errors	LOXL2	HGNC	ENSG00000134013				37	0	0.00	41	3	6.82
LRP1	0	genome.wustl.edu	37	12	57587720	57587720	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	12	57587720	57587720	G	A	SNP	LRP1	ENST00000243077	human	ensembl	74_37	+1	known	missense	c.7843	p.G2615R	1.000	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1	HGNC	ENSG00000123384	tier1	-	-	129	0	0.00	62	25	28.74
LRP1B	0	genome.wustl.edu	37	2	141092037	141092037	+	Missense_Mutation	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	141092037	141092037	A	C	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	missense	c.12208	p.L4070V	0.732	pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	tier1	-	-	88	0	0.00	53	12	18.46
LRP1B	0	genome.wustl.edu	37	2	141232707	141232707	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	141232707	141232707	C	T	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	missense	c.9625	p.V3209I	1.000	superfamily_Growth_fac_rcpt_N_dom,smart_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	tier1	-	-	38	0	0.00	16	4	20.00
LRP1B	0	genome.wustl.edu	37	2	141250214	141250214	+	Missense_Mutation	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	141250214	141250214	A	C	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	missense	c.9083	p.I3028S	1.000	superfamily_Growth_fac_rcpt_N_dom	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	tier1	-	-	105	0	0.00	73	18	19.78
LRRK2	0	genome.wustl.edu	37	12	40645048	40645048	+	Missense_Mutation	SNP	T	T	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	12	40645048	40645048	T	G	SNP	LRRK2	ENST00000298910	human	ensembl	74_37	+1	known	missense	c.973	p.L325V	1.000	superfamily_ARM-type_fold	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_MIRO-like,pfam_Small_GTPase,pfam_Leu-rich_rpt,pfam_Small_GTPase_ARF/SAR,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,superfamily_WD40_repeat_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Small_GTPase_Rab_type,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,prints_Small_GTPase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	LRRK2	HGNC	ENSG00000188906				54	0	0.00	28	5	15.15
LRTOMT	0	genome.wustl.edu	37	11	71817232	71817232	+	Missense_Mutation	SNP	T	T	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	71817232	71817232	T	G	SNP	LRTOMT	ENST00000307198	human	ensembl	74_37	+1	known	missense	c.334	p.L112V	1.000	NULL	pfam_O-MeTrfase_3	-	no_errors	LRTOMT	HGNC	ENSG00000184154	tier1	-	-	62	0	0.00	18	11	37.93
LZTFL1	0	genome.wustl.edu	37	3	45956999	45956999	+	Frame_Shift_Del	DEL	G	G	-			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	3	45956999	45956999	G	-	DEL	LZTFL1	ENST00000418700	human	ensembl	74_37	-1	known	frame_shift_del	c.112	p.R38fs	0.002	NULL	NULL	-	no_errors	LZTFL1	HGNC	ENSG00000163818	tier1			44	0	0.00	28	2	6.67
MAGEC3	0	genome.wustl.edu	37	X	140985396	140985396	+	Missense_Mutation	SNP	T	T	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	X	140985396	140985396	T	G	SNP	MAGEC3	ENST00000536088	human	ensembl	74_37	+1	known	missense	c.958	p.F320V	0.006	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEC3	HGNC	ENSG00000165509	tier1	-	-	44	0	0.00	24	20	45.45
MAGEE1	0	genome.wustl.edu	37	X	75650295	75650295	+	Missense_Mutation	SNP	A	A	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	X	75650295	75650295	A	G	SNP	MAGEE1	ENST00000361470	human	ensembl	74_37	+1	known	missense	c.1972	p.R658G	0.025	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEE1	HGNC	ENSG00000198934	tier1	-	-	27	0	0.00	13	6	31.58
MAPK7	0	genome.wustl.edu	37	17	19283228	19283228	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	17	19283228	19283228	G	T	SNP	MAPK7	ENST00000308406	human	ensembl	74_37	+1	known	missense	c.366	p.R122S	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAPK7	HGNC	ENSG00000166484	tier1	-	-	50	0	0.00	24	4	14.29
MEG3	0	genome.wustl.edu	37	14	101302337	101302337	+	RNA	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	14	101302337	101302337	G	A	SNP	MEG3	ENST00000455531	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MEG3	HGNC	ENSG00000214548	tier1	-	-	67	0	0.00	28	10	26.32
MFGE8	0	genome.wustl.edu	37	15	89442676	89442676	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	15	89442676	89442676	C	T	SNP	MFGE8	ENST00000268150	human	ensembl	74_37	-1	known	missense	c.1114	p.V372I	0.172	pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	pfam_Coagulation_fac_5/8-C_type_dom,pfam_EG-like_dom,superfamily_Galactose-bd-like,smart_EG-like_dom,smart_Coagulation_fac_5/8-C_type_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	MFGE8	HGNC	ENSG00000140545				77	0	0.00	64	4	5.88
MGA	0	genome.wustl.edu	37	15	42042674	42042674	+	Missense_Mutation	SNP	G	G	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	15	42042674	42042674	G	C	SNP	MGA	ENST00000219905	human	ensembl	74_37	+1	known	missense	c.6869	p.G2290A	0.925	NULL	pfam_TF_T-box,pfam_bHLH_dom,superfamily_p53-like_TF_DNA-bd,superfamily_bHLH_dom,smart_TF_T-box,smart_bHLH_dom,pfscan_bHLH_dom,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	MGA	HGNC	ENSG00000174197				30	0	0.00	30	2	6.25
MICAL3	0	genome.wustl.edu	37	22	18310414	18310414	+	Silent	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	22	18310414	18310414	G	A	SNP	MICAL3	ENST00000441493	human	ensembl	74_37	-1	known	silent	c.3189	p.S1063	0.961	NULL	pfam_DUF3585,pfam_CH-domain,pfam_CAMSAP_CH,pfam_Znf_LIM,pfam_mOase_FAD-bd,superfamily_CH-domain,smart_CH-domain,smart_Znf_LIM,pfscan_CH-domain,pfscan_Znf_LIM,prints_Rng_hydrolase-like	-	no_errors	MICAL3	HGNC	ENSG00000243156	tier1	-	-	244	0	0.00	83	34	28.81
MPPED2	0	genome.wustl.edu	37	11	30439101	30439101	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	30439101	30439101	C	T	SNP	MPPED2	ENST00000358117	human	ensembl	74_37	-1	known	missense	c.616	p.G206S	1.000	pfam_PEstase_dom	pfam_PEstase_dom	-	no_errors	MPPED2	HGNC	ENSG00000066382	tier1	-	-	51	0	0.00	26	12	31.58
MSN	0	genome.wustl.edu	37	X	64956699	64956699	+	Silent	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	X	64956699	64956699	G	A	SNP	MSN	ENST00000360270	human	ensembl	74_37	+1	known	silent	c.1002	p.E334	1.000	pirsf_ERM	pirsf_ERM,pfam_ERM_C_dom,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM_N,superfamily_FERM_central,superfamily_Moesin_tail,smart_Band_41_domain,prints_Ez/rad/moesin_like,prints_Band_41_fam,pfscan_FERM_domain	-	no_errors	MSN	HGNC	ENSG00000147065				22	0	0.00	30	3	9.09
MSN	0	genome.wustl.edu	37	X	64956743	64956743	+	Missense_Mutation	SNP	A	A	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	X	64956743	64956743	A	G	SNP	MSN	ENST00000360270	human	ensembl	74_37	+1	known	missense	c.1046	p.E349G	1.000	pirsf_ERM,pfam_ERM_C_dom	pirsf_ERM,pfam_ERM_C_dom,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM_N,superfamily_FERM_central,superfamily_Moesin_tail,smart_Band_41_domain,prints_Ez/rad/moesin_like,prints_Band_41_fam,pfscan_FERM_domain	-	no_errors	MSN	HGNC	ENSG00000147065				31	0	0.00	40	3	6.98
MT-ND5	0	genome.wustl.edu	37	MT	12344	12344	+	Missense_Mutation	SNP	T	T	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	MT	12344	12344	T	A	SNP	MT-ND5	ENST00000361567	human	ensembl	74_37	+1	known	missense	c.8	p.M3K	NULL	NULL	pfam_NADH_UbQ/plastoQ_OxRdtase,pfam_NADH_DH_su5_C,pfam_NADH_UbQ_OxRdtase_chain5/L_N,tigrfam_NADHpl_OxRdtase_5	-	no_errors	MT-ND5	HGNC	ENSG00000198786	tier1	-	-	35	0	0.00	4	2	33.33
MT-RNR1	0	genome.wustl.edu	37	MT	1546	1546	+	RNA	SNP	A	A	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	MT	1546	1546	A	G	SNP	MT-RNR1	ENST00000389680	human	ensembl	74_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-RNR1	HGNC	ENSG00000211459	tier1	-	-	42	0	0.00	3	2	40.00
MT-RNR1	0	genome.wustl.edu	37	MT	1553	1553	+	RNA	SNP	A	A	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	MT	1553	1553	A	T	SNP	MT-RNR1	ENST00000389680	human	ensembl	74_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-RNR1	HGNC	ENSG00000211459	tier1	-	-	44	0	0.00	3	2	40.00
MTHFD2L	0	genome.wustl.edu	37	4	75065639	75065639	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	4	75065639	75065639	G	T	SNP	MTHFD2L	ENST00000395759	human	ensembl	74_37	+1	known	missense	c.580	p.V194F	1.000	pfam_THF_DH/CycHdrlase_NAD-bd_dom	pfam_THF_DH/CycHdrlase_NAD-bd_dom,pfam_THF_DH/CycHdrlase_cat_dom,prints_THF_DH/CycHdrlase	-	no_errors	MTHFD2L	HGNC	ENSG00000163738	tier1	-	-	87	0	0.00	37	4	9.76
MUC13	0	genome.wustl.edu	37	3	124632422	124632423	+	Frame_Shift_Ins	INS	-	-	CTCT			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	3	124632422	124632423	-	CTCT	INS	MUC13	ENST00000311075	human	ensembl	74_37	-1	known	frame_shift_ins	c.1068_1067	p.S356fs	0.000:0.000	superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom	pfam_SEA_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,pfscan_EG-like_dom	-	no_errors	MUC13	HGNC	ENSG00000173702	tier1			63	0	0.00	45	9	16.67
MUC16	0	genome.wustl.edu	37	19	9049753	9049753	+	Silent	SNP	A	A	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	19	9049753	9049753	A	G	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	silent	c.31878	p.S10626	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	47	0	0.00	27	16	37.21
MUC16	0	genome.wustl.edu	37	19	9075786	9075786	+	Missense_Mutation	SNP	T	T	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	19	9075786	9075786	T	G	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.11660	p.N3887T	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	34	0	0.00	13	8	38.10
MUC16	0	genome.wustl.edu	37	19	9084596	9084596	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	19	9084596	9084596	G	T	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.7219	p.L2407I	0.117	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				65	0	0.00	36	3	7.69
MUC4	0	genome.wustl.edu	37	3	195509608	195509608	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	3	195509608	195509608	G	A	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	missense	c.8843	p.T2948I	0.005	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	tier1	-	-	169	0	0.00	191	76	28.46
MYBBP1A	0	genome.wustl.edu	37	17	4457381	4457382	+	Frame_Shift_Ins	INS	-	-	TGAG			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	17	4457381	4457382	-	TGAG	INS	MYBBP1A	ENST00000381556	human	ensembl	74_37	-1	known	frame_shift_ins	c.386_385	p.L129fs	0.888:0.000	pfam_DNA_pol_V,superfamily_ARM-type_fold	pfam_DNA_pol_V,superfamily_ARM-type_fold	-	no_errors	MYBBP1A	HGNC	ENSG00000132382	tier1			40	0	0.00	21	2	8.70
MYH6	0	genome.wustl.edu	37	14	23863430	23863430	+	Silent	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	14	23863430	23863430	G	A	SNP	MYH6	ENST00000356287	human	ensembl	74_37	-1	known	silent	c.2532	p.S844	0.904	NULL	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH6	HGNC	ENSG00000197616	tier1	-	-	46	0	0.00	38	11	22.45
MYH7	0	genome.wustl.edu	37	14	23890230	23890230	+	Silent	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	14	23890230	23890230	G	A	SNP	MYH7	ENST00000355349	human	ensembl	74_37	-1	known	silent	c.3273	p.N1091	0.023	pfam_Myosin_tail,superfamily_Prefoldin	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH7	HGNC	ENSG00000092054	tier1	rs200664031	-	51	0	0.00	12	15	55.56
MYL3	0	genome.wustl.edu	37	3	46904790	46904790	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	3	46904790	46904790	G	A	SNP	MYL3	ENST00000292327	human	ensembl	74_37	-1	known	missense	c.91	p.R31C	0.684	NULL	pfscan_EF_hand_dom	-	no_errors	MYL3	HGNC	ENSG00000160808	tier1	-	-	65	0	0.00	55	4	6.78
MYLIP	0	genome.wustl.edu	37	6	16146915	16146915	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	6	16146915	16146915	G	A	SNP	MYLIP	ENST00000356840	human	ensembl	74_37	+1	known	missense	c.1271	p.R424H	0.000	NULL	pfam_FERM_N,pfam_FERM_central,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,pfscan_Znf_RING,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	MYLIP	HGNC	ENSG00000007944	tier1	rs199758517	-	76	0	0.00	73	4	5.19
MYO15A	0	genome.wustl.edu	37	17	18082098	18082098	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	17	18082098	18082098	C	T	SNP	MYO15A	ENST00000205890	human	ensembl	74_37	+1	known	missense	c.10507	p.R3503C	1.000	pfscan_FERM_domain	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_SH3_2,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_SH3_domain,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO15A	HGNC	ENSG00000091536	tier1	-	-	42	0	0.00	20	10	33.33
MYO18B	0	genome.wustl.edu	37	22	26351222	26351222	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	22	26351222	26351222	G	T	SNP	MYO18B	ENST00000335473	human	ensembl	74_37	+1	known	missense	c.6048	p.Q2016H	1.000	NULL	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,superfamily_tRNA-bd_arm,superfamily_Ribosomal_zn-bd,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO18B	HGNC	ENSG00000133454				91	0	0.00	67	4	5.63
MYO3A	0	genome.wustl.edu	37	10	26455097	26455097	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	10	26455097	26455097	G	T	SNP	MYO3A	ENST00000265944	human	ensembl	74_37	+1	known	missense	c.3101	p.G1034V	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,pfscan_Prot_kinase_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO3A	HGNC	ENSG00000095777				67	0	0.00	52	3	5.45
MYOM2	0	genome.wustl.edu	37	8	2046716	2046716	+	Nonsense_Mutation	SNP	C	C	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	8	2046716	2046716	C	A	SNP	MYOM2	ENST00000262113	human	ensembl	74_37	+1	known	nonsense	c.2343	p.Y781*	0.997	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYOM2	HGNC	ENSG00000036448	tier1	-	-	122	0	0.00	46	47	50.54
NAA11	0	genome.wustl.edu	37	4	80246474	80246474	+	Silent	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	4	80246474	80246474	A	C	SNP	NAA11	ENST00000286794	human	ensembl	74_37	-1	known	silent	c.558	p.S186	0.000	NULL	pfam_GNAT_dom,pfam_FR47,superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	-	no_errors	NAA11	HGNC	ENSG00000156269	tier1	-	-	75	0	0.00	22	10	31.25
NBAS	0	genome.wustl.edu	37	2	15358907	15358907	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	15358907	15358907	G	A	SNP	NBAS	ENST00000281513	human	ensembl	74_37	-1	known	missense	c.6422	p.P2141L	1.000	NULL	pfam_Sec39,superfamily_Quino_amine_DH_bsu	-	no_errors	NBAS	HGNC	ENSG00000151779	tier1	-	-	78	0	0.00	50	14	21.88
NDRG1	0	genome.wustl.edu	37	8	134251058	134251058	+	RNA	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	8	134251058	134251058	G	A	SNP	NDRG1	ENST00000521414	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.331	-	-	-	no_errors	NDRG1	HGNC	ENSG00000104419	tier1	-	-	24	0	0.00	15	4	20.00
NDST3	0	genome.wustl.edu	37	4	118975271	118975271	+	Missense_Mutation	SNP	A	A	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	4	118975271	118975271	A	G	SNP	NDST3	ENST00000296499	human	ensembl	74_37	+1	known	missense	c.206	p.K69R	0.433	pfam_Heparan_SO4_deacetylase	pfam_Heparan_SO4_deacetylase,pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	NDST3	HGNC	ENSG00000164100	tier1	-	-	30	0	0.00	13	6	31.58
NEB	0	genome.wustl.edu	37	2	152362681	152362681	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	152362681	152362681	G	A	SNP	NEB	ENST00000397345	human	ensembl	74_37	-1	known	missense	c.23648	p.S7883L	1.000	pfam_Nebulin_35r-motif,smart_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Adhesion_dom,superfamily_6-PGluconate_DH_C-like,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_Nebulin	-	no_errors	NEB	HGNC	ENSG00000183091	tier1	rs202191938	-	90	0	0.00	56	18	24.32
NEFH	0	genome.wustl.edu	37	22	29884949	29884949	+	Missense_Mutation	SNP	C	C	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	22	29884949	29884949	C	A	SNP	NEFH	ENST00000310624	human	ensembl	74_37	+1	known	missense	c.1320	p.S440R	0.603	NULL	pfam_IF,pfam_DUF1388	-	no_errors	NEFH	HGNC	ENSG00000100285	tier1	-	-	49	0	0.00	30	21	41.18
NELL1	0	genome.wustl.edu	37	11	21592442	21592442	+	Missense_Mutation	SNP	A	A	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	21592442	21592442	A	G	SNP	NELL1	ENST00000357134	human	ensembl	74_37	+1	known	missense	c.2113	p.S705G	1.000	pfam_VWF_C,smart_VWC_out,smart_VWF_C,pfscan_VWF_C	pfam_EGF-like_Ca-bd_dom,pfam_VWF_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_VWC_out,smart_VWF_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_VWF_C	-	no_errors	NELL1	HGNC	ENSG00000165973	tier1	-	-	96	0	0.00	32	10	22.73
NETO1	0	genome.wustl.edu	37	18	70502512	70502512	+	RNA	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	18	70502512	70502512	A	C	SNP	NETO1	ENST00000580049	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	NETO1	HGNC	ENSG00000166342	tier1	-	-	57	0	0.00	14	8	36.36
NLGN4Y	0	genome.wustl.edu	37	Y	16936229	16936229	+	Missense_Mutation	SNP	T	T	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	Y	16936229	16936229	T	A	SNP	NLGN4Y	ENST00000382868	human	ensembl	74_37	+1	known	missense	c.958	p.L320M	1.000	pfam_CarbesteraseB	pfam_CarbesteraseB,prints_Neuroligin	-	no_errors	NLGN4Y	HGNC	ENSG00000165246	tier1	-	-	84	0	0.00	23	29	55.77
NME7	0	genome.wustl.edu	37	1	169199982	169199982	+	Silent	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	1	169199982	169199982	G	T	SNP	NME7	ENST00000367811	human	ensembl	74_37	-1	known	silent	c.964	p.R322	0.999	pfam_Nucleoside_diP_kinase,superfamily_Nucleoside_diP_kinase,smart_Nucleoside_diP_kinase,pirsf_NDK7	pfam_Nucleoside_diP_kinase,superfamily_Nucleoside_diP_kinase,smart_Uncharacterised_DM10,smart_Nucleoside_diP_kinase,pirsf_NDK7,prints_Nucleoside_diP_kinase	-	no_errors	NME7	HGNC	ENSG00000143156				38	0	0.00	34	2	5.56
NME8	0	genome.wustl.edu	37	7	37924817	37924817	+	Silent	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	7	37924817	37924817	A	C	SNP	NME8	ENST00000199447	human	ensembl	74_37	+1	known	silent	c.1210	p.R404	0.898	pfam_Nucleoside_diP_kinase,superfamily_Nucleoside_diP_kinase,smart_Nucleoside_diP_kinase	pfam_Nucleoside_diP_kinase,pfam_Thioredoxin_domain,superfamily_Nucleoside_diP_kinase,superfamily_Thioredoxin-like_fold,smart_Nucleoside_diP_kinase	-	no_errors	NME8	HGNC	ENSG00000086288	tier1	-	-	81	0	0.00	53	15	22.06
NOL4	0	genome.wustl.edu	37	18	31599532	31599532	+	Missense_Mutation	SNP	T	T	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	18	31599532	31599532	T	C	SNP	NOL4	ENST00000261592	human	ensembl	74_37	-1	known	missense	c.806	p.E269G	1.000	NULL	NULL	-	no_errors	NOL4	HGNC	ENSG00000101746	tier1	-	-	61	0	0.00	32	21	38.89
NOXO1	0	genome.wustl.edu	37	16	2031151	2031151	+	Silent	SNP	C	C	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	16	2031151	2031151	C	A	SNP	NOXO1	ENST00000397280	human	ensembl	74_37	-1	known	silent	c.30	p.V10	0.003	superfamily_Phox,pfscan_Phox	pfam_SH3_domain,pfam_Phox,superfamily_Phox,superfamily_SH3_domain,smart_SH3_domain,pfscan_Phox,pfscan_SH3_domain	-	no_errors	NOXO1	HGNC	ENSG00000196408	tier1	-	-	115	0	0.00	71	17	19.32
NPEPL1	0	genome.wustl.edu	37	20	57289051	57289051	+	Missense_Mutation	SNP	A	A	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	20	57289051	57289051	A	G	SNP	NPEPL1	ENST00000356091	human	ensembl	74_37	+1	known	missense	c.1204	p.R402G	0.768	pfam_Peptidase_M17_C	pfam_Peptidase_M17_C,prints_Leucine_aapep/pepB	-	no_errors	NPEPL1	HGNC	ENSG00000215440	tier1	-	-	103	0	0.00	54	53	49.53
NRG1	0	genome.wustl.edu	37	8	32617883	32617883	+	Silent	SNP	A	A	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	8	32617883	32617883	A	G	SNP	NRG1	ENST00000338921	human	ensembl	74_37	+1	known	silent	c.1251	p.R417	1.000	pfam_Neuregulin_1_C	pfam_Neuregulin_1_C,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Ig-like_dom,prints_Neuregulin	-	no_errors	NRG1	HGNC	ENSG00000157168	tier1	-	-	34	0	0.00	23	20	46.51
NRG2	0	genome.wustl.edu	37	5	139422014	139422015	+	Frame_Shift_Ins	INS	-	-	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	5	139422014	139422015	-	G	INS	NRG2	ENST00000545385	human	ensembl	74_37	-1	known	frame_shift_ins	c.641_640	p.L214fs	1.000:1.000	NULL	pfam_Neuregulin_1_C,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_EG-like_dom,pfscan_Ig-like_dom	-	no_errors	NRG2	HGNC	ENSG00000158458	tier1			110	0	0.00	37	28	43.08
NRP2	0	genome.wustl.edu	37	2	206641091	206641091	+	Silent	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	206641091	206641091	G	A	SNP	NRP2	ENST00000272849	human	ensembl	74_37	+1	known	silent	c.2562	p.A854	0.891	pirsf_Neuropilin,pfam_Neuropilin1_C	pirsf_Neuropilin,pfam_CUB_dom,pfam_Coagulation_fac_5/8-C_type_dom,pfam_Neuropilin1_C,pfam_MAM_dom,superfamily_Galactose-bd-like,superfamily_CUB_dom,superfamily_ConA-like_lec_gl_sf,smart_CUB_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_MAM_dom,prints_MAM_dom,pfscan_CUB_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_MAM_dom	-	no_errors	NRP2	HGNC	ENSG00000118257				47	0	0.00	49	4	7.55
NRXN2	0	genome.wustl.edu	37	11	64415728	64415728	+	Silent	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	64415728	64415728	G	A	SNP	NRXN2	ENST00000265459	human	ensembl	74_37	-1	known	silent	c.3366	p.C1122	1.000	superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,pfscan_EG-like_dom	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN2	HGNC	ENSG00000110076	tier1	-	-	54	0	0.00	27	9	25.00
NRXN2	0	genome.wustl.edu	37	11	64434791	64434791	+	Silent	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	64434791	64434791	G	T	SNP	NRXN2	ENST00000265459	human	ensembl	74_37	-1	known	silent	c.1729	p.R577	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN2	HGNC	ENSG00000110076				85	0	0.00	35	2	5.26
NTM	0	genome.wustl.edu	37	11	132205623	132205624	+	RNA	INS	-	-	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	132205623	132205624	-	T	INS	NTM	ENST00000474900	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	NTM	HGNC	ENSG00000182667	tier1			35	0	0.00	15	5	25.00
NTRK3	0	genome.wustl.edu	37	15	88474441	88474441	+	RNA	SNP	T	T	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	15	88474441	88474441	T	C	SNP	NTRK3	ENST00000559680	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.004	-	-	-	no_errors	NTRK3	HGNC	ENSG00000140538	tier1	-	-	104	0	0.00	54	15	21.74
NUMA1	0	genome.wustl.edu	37	11	71725098	71725098	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	71725098	71725098	C	T	SNP	NUMA1	ENST00000393695	human	ensembl	74_37	-1	known	missense	c.3451	p.E1151K	0.041	NULL	superfamily_Prefoldin	-	no_errors	NUMA1	HGNC	ENSG00000137497				67	0	0.00	37	2	5.13
NUP210	0	genome.wustl.edu	37	3	13429848	13429848	+	Silent	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	3	13429848	13429848	G	A	SNP	NUP210	ENST00000254508	human	ensembl	74_37	-1	known	silent	c.639	p.T213	0.000	NULL	pfam_Big_2,superfamily_Invasin/intimin_cell_adhesion,superfamily_Cadherin-like,smart_Big_2	-	no_errors	NUP210	HGNC	ENSG00000132182	tier1	-	-	38	0	0.00	16	10	38.46
OR10J1	0	genome.wustl.edu	37	1	159409982	159409982	+	Missense_Mutation	SNP	T	T	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	1	159409982	159409982	T	G	SNP	OR10J1	ENST00000423932	human	ensembl	74_37	+1	known	missense	c.434	p.V145G	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10J1	HGNC	ENSG00000196184	tier1	-	-	80	0	0.00	64	19	22.89
OR11H12	0	genome.wustl.edu	37	14	19378218	19378218	+	Nonsense_Mutation	SNP	A	A	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	14	19378218	19378218	A	T	SNP	OR11H12	ENST00000550708	human	ensembl	74_37	+1	known	nonsense	c.625	p.R209*	0.065	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR11H12	HGNC	ENSG00000257115	tier1	-	-	42	0	0.00	18	6	25.00
OR2B3	0	genome.wustl.edu	37	6	29054257	29054257	+	Missense_Mutation	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	6	29054257	29054257	A	C	SNP	OR2B3	ENST00000377173	human	ensembl	74_37	-1	known	missense	c.769	p.Y257D	0.397	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2B3	HGNC	ENSG00000204703	tier1	-	-	30	0	0.00	14	16	53.33
OR2T12	0	genome.wustl.edu	37	1	248458213	248458213	+	Missense_Mutation	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	1	248458213	248458213	A	C	SNP	OR2T12	ENST00000317996	human	ensembl	74_37	-1	known	missense	c.668	p.V223G	0.064	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T12	HGNC	ENSG00000177201	tier1	-	-	133	0	0.00	78	32	29.09
OR4C15	0	genome.wustl.edu	37	11	55322171	55322171	+	Missense_Mutation	SNP	T	T	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	55322171	55322171	T	G	SNP	OR4C15	ENST00000314644	human	ensembl	74_37	+1	known	missense	c.389	p.I130S	0.002	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C15	HGNC	ENSG00000181939	tier1	-	-	65	0	0.00	50	13	20.63
OR4C3	0	genome.wustl.edu	37	11	48346846	48346846	+	Silent	SNP	T	T	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	48346846	48346846	T	C	SNP	OR4C3	ENST00000319856	human	ensembl	74_37	+1	known	silent	c.354	p.S118	0.020	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C3	HGNC	ENSG00000176547	tier1	-	-	111	0	0.00	51	13	20.31
OR4P4	0	genome.wustl.edu	37	11	55406320	55406320	+	Missense_Mutation	SNP	T	T	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	55406320	55406320	T	C	SNP	OR4P4	ENST00000314612	human	ensembl	74_37	+1	known	missense	c.487	p.F163L	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4P4	HGNC	ENSG00000181927	tier1	-	-	59	0	0.00	31	14	31.11
OR4S2	0	genome.wustl.edu	37	11	55418427	55418427	+	Silent	SNP	T	T	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	55418427	55418427	T	C	SNP	OR4S2	ENST00000312422	human	ensembl	74_37	+1	known	silent	c.48	p.S16	0.042	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4S2	HGNC	ENSG00000174982	tier1	-	-	56	0	0.00	19	56	74.67
OR51F1	0	genome.wustl.edu	37	11	4790663	4790663	+	Missense_Mutation	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	4790663	4790663	A	C	SNP	OR51F1	ENST00000380383	human	ensembl	74_37	-1	known	missense	c.506	p.L169R	0.102	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51F1	HGNC	ENSG00000188069	tier1	-	-	53	0	0.00	23	7	23.33
OR5I1	0	genome.wustl.edu	37	11	55703776	55703776	+	Missense_Mutation	SNP	A	A	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	55703776	55703776	A	G	SNP	OR5I1	ENST00000301532	human	ensembl	74_37	-1	known	missense	c.101	p.L34P	0.980	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5I1	HGNC	ENSG00000167825	tier1	-	-	50	0	0.00	20	9	31.03
OR5L2	0	genome.wustl.edu	37	11	55595355	55595355	+	Missense_Mutation	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	55595355	55595355	A	C	SNP	OR5L2	ENST00000378397	human	ensembl	74_37	+1	known	missense	c.661	p.I221L	0.882	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5L2	HGNC	ENSG00000205030	tier1	-	-	71	0	0.00	43	11	20.00
OR5T2	0	genome.wustl.edu	37	11	55999981	55999981	+	Silent	SNP	A	A	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	55999981	55999981	A	G	SNP	OR5T2	ENST00000313264	human	ensembl	74_37	-1	known	silent	c.681	p.S227	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5T2	HGNC	ENSG00000181718	tier1	-	-	96	0	0.00	43	28	39.44
OR5T3	0	genome.wustl.edu	37	11	56020014	56020014	+	Silent	SNP	C	C	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	56020014	56020014	C	A	SNP	OR5T3	ENST00000303059	human	ensembl	74_37	+1	known	silent	c.339	p.V113	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5T3	HGNC	ENSG00000172489	tier1	-	-	106	0	0.00	47	15	24.19
OR6F1	0	genome.wustl.edu	37	1	247875936	247875936	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	1	247875936	247875936	C	T	SNP	OR6F1	ENST00000302084	human	ensembl	74_37	-1	known	missense	c.122	p.G41D	0.002	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6F1	HGNC	ENSG00000169214	tier1	-	-	37	0	0.00	25	4	13.79
OR7C2	0	genome.wustl.edu	37	19	15052988	15052988	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	19	15052988	15052988	G	T	SNP	OR7C2	ENST00000248072	human	ensembl	74_37	+1	known	missense	c.688	p.A230S	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR7C2	HGNC	ENSG00000127529				66	0	0.00	65	6	8.45
OR7G2	0	genome.wustl.edu	37	19	9213844	9213844	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	19	9213844	9213844	C	T	SNP	OR7G2	ENST00000305456	human	ensembl	74_37	-1	known	missense	c.139	p.V47I	0.000	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR7G2	HGNC	ENSG00000170923	tier1	rs201831795	-	71	0	0.00	35	20	36.36
OR8J3	0	genome.wustl.edu	37	11	55905031	55905031	+	Missense_Mutation	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	55905031	55905031	A	C	SNP	OR8J3	ENST00000301529	human	ensembl	74_37	-1	known	missense	c.164	p.L55R	0.930	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8J3	HGNC	ENSG00000167822	tier1	-	-	96	0	0.00	48	17	26.15
OSR1	0	genome.wustl.edu	37	2	19552116	19552117	+	Frame_Shift_Ins	INS	-	-	GAAT			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	19552116	19552117	-	GAAT	INS	OSR1	ENST00000272223	human	ensembl	74_37	-1	known	frame_shift_ins	c.721_720	p.C240fs	1.000:1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	OSR1	HGNC	ENSG00000143867	tier1			31	0	0.00	36	5	12.20
P2RY1	0	genome.wustl.edu	37	3	152553640	152553640	+	Silent	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	3	152553640	152553640	G	A	SNP	P2RY1	ENST00000305097	human	ensembl	74_37	+1	known	silent	c.69	p.S23	0.001	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_P2Y1_rcpt,prints_GPCR_Rhodpsn	-	no_errors	P2RY1	HGNC	ENSG00000169860	tier1	-	-	154	0	0.00	30	52	63.41
PAH	0	genome.wustl.edu	37	12	103288680	103288680	+	Missense_Mutation	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	12	103288680	103288680	A	C	SNP	PAH	ENST00000553106	human	ensembl	74_37	-1	known	missense	c.185	p.L62R	1.000	pfam_ACT_dom,pirsf_Tyrosine_3-monooxygenase-like,tigrfam_Phe-4-hydroxylase_tetra	pfam_Aromatic-AA_hydroxylase_C,pfam_ACT_dom,superfamily_Aromatic-AA_hydroxylase_C,pirsf_Tyrosine_3-monooxygenase-like,prints_Aromatic-AA_hydroxylase_C,tigrfam_Phe-4-hydroxylase_tetra	-	no_errors	PAH	HGNC	ENSG00000171759				44	0	0.00	18	3	14.29
PCDH9	0	genome.wustl.edu	37	13	67799672	67799672	+	Silent	SNP	G	G	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	13	67799672	67799672	G	C	SNP	PCDH9	ENST00000377865	human	ensembl	74_37	-1	known	silent	c.2901	p.L967	1.000	pfam_Protocadherin	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH9	HGNC	ENSG00000184226	tier1	-	-	39	0	0.00	38	7	15.56
PCDHB18	0	genome.wustl.edu	37	5	140615746	140615746	+	RNA	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	5	140615746	140615746	G	A	SNP	PCDHB18	ENST00000526308	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.936	-	-	-	no_errors	PCDHB18	HGNC	ENSG00000146001	tier1	-	-	236	0	0.00	134	64	32.32
PCLO	0	genome.wustl.edu	37	7	82584392	82584392	+	Silent	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	7	82584392	82584392	A	C	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	silent	c.5877	p.S1959	0.980	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472	tier1	-	-	81	0	0.00	36	22	37.93
PCNXL3	0	genome.wustl.edu	37	11	65389815	65389815	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	65389815	65389815	G	A	SNP	PCNXL3	ENST00000355703	human	ensembl	74_37	+1	known	missense	c.2335	p.A779T	0.963	NULL	pfam_Pecanex	-	no_errors	PCNXL3	HGNC	ENSG00000197136	tier1	-	-	101	0	0.00	45	22	32.35
PDE2A	0	genome.wustl.edu	37	11	72288494	72288494	+	Silent	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	72288494	72288494	G	A	SNP	PDE2A	ENST00000334456	human	ensembl	74_37	-1	known	silent	c.2760	p.Y920	0.086	NULL	pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE2A	HGNC	ENSG00000186642	tier1	-	-	79	0	0.00	66	4	5.71
PDZRN3	0	genome.wustl.edu	37	3	73673769	73673769	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	3	73673769	73673769	G	A	SNP	PDZRN3	ENST00000263666	human	ensembl	74_37	-1	known	missense	c.208	p.P70S	1.000	NULL	pfam_PDZ,pfam_Znf_C3HC4_RING-type,superfamily_PDZ,superfamily_TRAF-like,smart_Znf_RING,smart_PDZ,pfscan_PDZ,pfscan_Znf_RING,pfscan_Znf_TRAF	-	no_errors	PDZRN3	HGNC	ENSG00000121440				85	0	0.00	53	4	7.02
PGBD4	0	genome.wustl.edu	37	15	34396476	34396476	+	Frame_Shift_Del	DEL	A	A	-			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	15	34396476	34396476	A	-	DEL	PGBD4	ENST00000397766	human	ensembl	74_37	+1	known	frame_shift_del	c.1744	p.N584fs	0.177	NULL	NULL	-	no_errors	PGBD4	HGNC	ENSG00000182405	tier1			25	0	0.00	29	2	6.45
PHACTR2	0	genome.wustl.edu	37	6	144033170	144033170	+	Frame_Shift_Del	DEL	G	G	-			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	6	144033170	144033170	G	-	DEL	PHACTR2	ENST00000440869	human	ensembl	74_37	+1	known	frame_shift_del	c.64	p.A22fs	1.000	NULL	pfam_RPEL_repeat,smart_RPEL_repeat,pfscan_RPEL_repeat	-	no_errors	PHACTR2	HGNC	ENSG00000112419	tier1			86	0	0.00	60	12	16.67
PHF1	0	genome.wustl.edu	37	6	33380096	33380097	+	Frame_Shift_Ins	INS	-	-	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	6	33380096	33380097	-	T	INS	PHF1	ENST00000374516	human	ensembl	74_37	+1	known	frame_shift_ins	c.56_57	p.S20fs	0.147:0.340	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Tudor,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF1	HGNC	ENSG00000112511	tier1			67	0	0.00	70	13	15.66
PHF15	0	genome.wustl.edu	37	5	133880214	133880214	+	RNA	DEL	A	A	-			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	5	133880214	133880214	A	-	DEL	PHF15	ENST00000453515	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PHF15	HGNC	ENSG00000043143	tier1			11	0	0.00	4	2	33.33
PHKB	0	genome.wustl.edu	37	16	47730372	47730372	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	16	47730372	47730372	G	T	SNP	PHKB	ENST00000299167	human	ensembl	74_37	+1	known	missense	c.2976	p.Q992H	1.000	NULL	pfam_Glyco_hydro_15,superfamily_6-hairpin_glycosidase-like	-	no_errors	PHKB	HGNC	ENSG00000102893	tier1	-	-	48	0	0.00	72	4	5.26
PIAS1	0	genome.wustl.edu	37	15	68434296	68434296	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	15	68434296	68434296	G	T	SNP	PIAS1	ENST00000249636	human	ensembl	74_37	+1	known	missense	c.482	p.S161I	1.000	NULL	pfam_Znf_MIZ,smart_SAP_dom,pfscan_Znf_MIZ,pfscan_SAP_dom	-	no_errors	PIAS1	HGNC	ENSG00000033800	tier1	-	-	59	0	0.00	38	4	9.52
PLA2G4D	0	genome.wustl.edu	37	15	42377325	42377325	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	15	42377325	42377325	G	T	SNP	PLA2G4D	ENST00000290472	human	ensembl	74_37	-1	known	missense	c.440	p.P147Q	0.976	NULL	pfam_LysoPLipase_cat_dom,pfam_C2_dom,superfamily_Acyl_Trfase/lysoPLipase,superfamily_C2_dom,smart_C2_dom,smart_LysoPLipase_cat_dom,pfscan_C2_dom,pfscan_LysoPLipase_cat_dom	-	no_errors	PLA2G4D	HGNC	ENSG00000159337				35	0	0.00	34	2	5.56
PLEK	0	genome.wustl.edu	37	2	68607874	68607874	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	68607874	68607874	C	T	SNP	PLEK	ENST00000234313	human	ensembl	74_37	+1	known	missense	c.218	p.T73M	0.719	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Pleckstrin_homology,pfam_DEP_dom,smart_Pleckstrin_homology,smart_DEP_dom,pfscan_DEP_dom,pfscan_Pleckstrin_homology	-	no_errors	PLEK	HGNC	ENSG00000115956	tier1	rs200352669	-	43	0	0.00	34	9	20.93
PLOD3	0	genome.wustl.edu	37	7	100850972	100850972	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	7	100850972	100850972	G	A	SNP	PLOD3	ENST00000223127	human	ensembl	74_37	-1	known	missense	c.1822	p.P608S	1.000	smart_Pro_4_hyd_alph	pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	-	no_errors	PLOD3	HGNC	ENSG00000106397				126	0	0.00	75	4	5.06
POMZP3	0	genome.wustl.edu	37	7	76240862	76240862	+	Nonsense_Mutation	SNP	T	T	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	7	76240862	76240862	T	A	SNP	POMZP3	ENST00000310842	human	ensembl	74_37	-1	known	nonsense	c.484	p.K162*	0.952	NULL	pfam_ZP_dom	-	no_errors	POMZP3	HGNC	ENSG00000146707	tier1	-	-	27	0	0.00	18	8	30.77
POU2F1	0	genome.wustl.edu	37	1	167343365	167343365	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	1	167343365	167343365	G	T	SNP	POU2F1	ENST00000367866	human	ensembl	74_37	+1	known	missense	c.423	p.Q141H	1.000	NULL	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU,prints_TF_octamer	-	no_errors	POU2F1	HGNC	ENSG00000143190				70	0	0.00	59	4	6.35
PPM1D	0	genome.wustl.edu	37	17	58740749	58740749	+	Nonsense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	17	58740749	58740749	C	T	SNP	PPM1D	ENST00000305921	human	ensembl	74_37	+1	known	nonsense	c.1654	p.R552*	0.999	NULL	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	-	no_errors	PPM1D	HGNC	ENSG00000170836	tier1	-	-	46	0	0.00	20	33	62.26
PPP1R3D	0	genome.wustl.edu	37	20	58514138	58514138	+	Silent	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	20	58514138	58514138	C	T	SNP	PPP1R3D	ENST00000370996	human	ensembl	74_37	-1	known	silent	c.849	p.A283	0.026	pirsf_Pase-1_Glycogen_target-su_met	pfam_CBM_21,pirsf_Pase-1_Glycogen_target-su_met,pfscan_CBM_21	-	no_errors	PPP1R3D	HGNC	ENSG00000132825				43	0	0.00	34	2	5.56
PRB3	0	genome.wustl.edu	37	12	11420581	11420581	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	12	11420581	11420581	G	A	SNP	PRB3	ENST00000381842	human	ensembl	74_37	-1	known	missense	c.602	p.P201L	0.023	NULL	NULL	-	no_errors	PRB3	HGNC	ENSG00000197870	tier1	-	-	130	0	0.00	162	9	5.26
PREX2	0	genome.wustl.edu	37	8	68930087	68930087	+	Silent	SNP	T	T	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	8	68930087	68930087	T	C	SNP	PREX2	ENST00000288368	human	ensembl	74_37	+1	known	silent	c.148	p.L50	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_DEP_dom,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,smart_DH-domain,smart_Pleckstrin_homology,smart_DEP_dom,smart_PDZ,pfscan_DEP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PREX2	HGNC	ENSG00000046889	tier1	-	-	37	0	0.00	29	10	25.64
PRL	0	genome.wustl.edu	37	6	22287671	22287671	+	Missense_Mutation	SNP	T	T	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	6	22287671	22287671	T	C	SNP	PRL	ENST00000306482	human	ensembl	74_37	-1	known	missense	c.644	p.K215R	1.000	pfam_Somatotropin,superfamily_4_helix_cytokine-like_core,prints_Somatotropin	pfam_Somatotropin,superfamily_4_helix_cytokine-like_core,prints_Somatotropin	-	no_errors	PRL	HGNC	ENSG00000172179	tier1	-	-	49	0	0.00	45	10	18.18
PROSER1	0	genome.wustl.edu	37	13	39585557	39585557	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	13	39585557	39585557	G	T	SNP	PROSER1	ENST00000352251	human	ensembl	74_37	-1	known	missense	c.2780	p.A927E	0.328	NULL	NULL	-	no_errors	PROSER1	HGNC	ENSG00000120685	tier1	-	-	58	0	0.00	66	4	5.71
PRSS35	0	genome.wustl.edu	37	6	84233305	84233305	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	6	84233305	84233305	G	A	SNP	PRSS35	ENST00000369700	human	ensembl	74_37	+1	known	missense	c.145	p.A49T	0.000	NULL	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom	-	no_errors	PRSS35	HGNC	ENSG00000146250	tier1	-	-	68	0	0.00	64	4	5.88
PTMAP5	0	genome.wustl.edu	37	13	82264250	82264250	+	RNA	SNP	C	C	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	13	82264250	82264250	C	A	SNP	PTMAP5	ENST00000607242	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.989	-	-	-	no_errors	PTMAP5	HGNC	ENSG00000214182	tier1	-	-	60	0	0.00	42	12	22.22
PTPRK	0	genome.wustl.edu	37	6	128298110	128298110	+	Silent	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	6	128298110	128298110	G	A	SNP	PTPRK	ENST00000368227	human	ensembl	74_37	-1	known	silent	c.3852	p.G1284	1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Ig_sub,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRK	HGNC	ENSG00000152894	tier1	-	-	64	0	0.00	56	4	6.67
PTPRK	0	genome.wustl.edu	37	6	128321471	128321471	+	RNA	SNP	T	T	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	6	128321471	128321471	T	A	SNP	PTPRK	ENST00000524481	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	PTPRK	HGNC	ENSG00000152894	tier1	-	-	92	0	0.00	64	23	26.44
PTPRK	0	genome.wustl.edu	37	6	128321472	128321472	+	RNA	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	6	128321472	128321472	C	T	SNP	PTPRK	ENST00000524481	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	PTPRK	HGNC	ENSG00000152894	tier1	-	-	89	0	0.00	65	22	25.29
PUS3	0	genome.wustl.edu	37	11	125763901	125763901	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	125763901	125763901	G	A	SNP	PUS3	ENST00000227474	human	ensembl	74_37	-1	known	missense	c.1225	p.R409C	0.988	NULL	pfam_PsdUridine_synth_TruA_a/b_dom,superfamily_PsdUridine_synth_cat_dom,tigrfam_PsdUridine_synth_TruA	-	no_errors	PUS3	HGNC	ENSG00000110060				92	0	0.00	32	2	5.88
RAPH1	0	genome.wustl.edu	37	2	204306090	204306090	+	Frame_Shift_Del	DEL	G	G	-			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	204306090	204306090	G	-	DEL	RAPH1	ENST00000374493	human	ensembl	74_37	-1	known	frame_shift_del	c.1979	p.P660fs	0.975	superfamily_Kinase-like_dom	pfam_Ras-assoc,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Ras-assoc,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,prints_Paxillin	-	no_errors	RAPH1	HGNC	ENSG00000173166	tier1			24	0	0.00	27	2	6.90
RBM42	0	genome.wustl.edu	37	19	36122048	36122048	+	Missense_Mutation	SNP	C	C	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	19	36122048	36122048	C	G	SNP	RBM42	ENST00000262633	human	ensembl	74_37	+1	known	missense	c.289	p.Q97E	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM42	HGNC	ENSG00000126254	tier1	-	-	67	0	0.00	36	9	20.00
RFTN1	0	genome.wustl.edu	37	3	16419421	16419421	+	Silent	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	3	16419421	16419421	C	T	SNP	RFTN1	ENST00000334133	human	ensembl	74_37	-1	known	silent	c.630	p.V210	0.000	NULL	NULL	-	no_errors	RFTN1	HGNC	ENSG00000131378	tier1	-	-	83	0	0.00	38	10	20.83
RGPD3	0	genome.wustl.edu	37	2	107040934	107040934	+	Missense_Mutation	SNP	T	T	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	107040934	107040934	T	G	SNP	RGPD3	ENST00000304514	human	ensembl	74_37	-1	known	missense	c.3489	p.K1163N	1.000	pfam_Ran_bind_dom,smart_Ran_bind_dom,pfscan_Ran_bind_dom	pfam_Ran_bind_dom,pfam_GRIP,pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,smart_Ran_bind_dom,smart_GRIP,pfscan_GRIP,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Ran_bind_dom	-	no_errors	RGPD3	HGNC	ENSG00000153165	tier1	-	-	151	0	0.00	106	25	19.08
RGS12	0	genome.wustl.edu	37	4	3418674	3418674	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	4	3418674	3418674	G	A	SNP	RGS12	ENST00000344733	human	ensembl	74_37	+1	known	missense	c.2462	p.R821H	1.000	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	pfam_Raf-like_ras-bd,pfam_RGS_dom,pfam_PDZ,pfam_GoLoco_motif,superfamily_Regulat_G_prot_signal_superfam,superfamily_PDZ,smart_PDZ,smart_PTB/PI_dom,smart_Regulat_G_prot_signal_superfam,smart_Raf-like_ras-bd,smart_GoLoco_motif,pfscan_GoLoco_motif,pfscan_PDZ,pfscan_PTB/PI_dom,pfscan_Raf-like_ras-bd,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS12	HGNC	ENSG00000159788	tier1	-	-	55	0	0.00	22	9	29.03
RGS6	0	genome.wustl.edu	37	14	73006768	73006768	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	14	73006768	73006768	G	A	SNP	RGS6	ENST00000553525	human	ensembl	74_37	+1	known	missense	c.1388	p.R463H	1.000	NULL	pfam_RGS_dom,pfam_G-protein_gamma-like_dom,pfam_DEP_dom,superfamily_Regulat_G_prot_signal_superfam,superfamily_G-protein_gamma-like_dom,smart_DEP_dom,smart_G-protein_gamma-like_dom,smart_Regulat_G_prot_signal_superfam,pfscan_DEP_dom,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS6	HGNC	ENSG00000182732	tier1	-	-	73	0	0.00	23	24	51.06
RIMBP2	0	genome.wustl.edu	37	12	130929802	130929802	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	12	130929802	130929802	G	T	SNP	RIMBP2	ENST00000261655	human	ensembl	74_37	-1	known	missense	c.543	p.F181L	0.953	superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	RIMBP2	HGNC	ENSG00000060709				54	0	0.00	48	3	5.88
RIMS2	0	genome.wustl.edu	37	8	104924382	104924382	+	Silent	SNP	A	A	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	8	104924382	104924382	A	G	SNP	RIMS2	ENST00000406091	human	ensembl	74_37	+1	known	silent	c.1794	p.G598	1.000	pfam_PDZ,superfamily_PDZ,pfscan_PDZ	pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,superfamily_PDZ,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel	-	no_errors	RIMS2	HGNC	ENSG00000176406	tier1	-	-	55	0	0.00	33	17	34.00
RIMS2	0	genome.wustl.edu	37	8	105235954	105235954	+	Silent	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	8	105235954	105235954	G	T	SNP	RIMS2	ENST00000339750	human	ensembl	74_37	+1	known	silent	c.75	p.L25	0.970	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	RIMS2	HGNC	ENSG00000176406	tier1	-	-	113	0	0.00	55	25	31.25
RIPK1	0	genome.wustl.edu	37	6	3078089	3078089	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	6	3078089	3078089	G	A	SNP	RIPK1	ENST00000259808	human	ensembl	74_37	+1	known	missense	c.241	p.V81I	0.058	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Death_domain,superfamily_Kinase-like_dom,superfamily_DEATH-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Death_domain,pfscan_Death_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	RIPK1	HGNC	ENSG00000137275				53	0	0.00	56	3	5.08
RNF150	0	genome.wustl.edu	37	4	141888806	141888806	+	Nonsense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	4	141888806	141888806	G	A	SNP	RNF150	ENST00000515673	human	ensembl	74_37	-1	known	nonsense	c.706	p.R236*	1.000	NULL	pfam_Protease-assoc_domain,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF150	HGNC	ENSG00000170153				56	0	0.00	19	3	13.64
ROS1	0	genome.wustl.edu	37	6	117632255	117632255	+	Missense_Mutation	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	6	117632255	117632255	A	C	SNP	ROS1	ENST00000368508	human	ensembl	74_37	-1	known	missense	c.6161	p.V2054G	0.753	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_LDLR_classB_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ROS1	HGNC	ENSG00000047936				40	0	0.00	41	4	8.89
RTN3	0	genome.wustl.edu	37	11	63487976	63487976	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	63487976	63487976	G	T	SNP	RTN3	ENST00000377819	human	ensembl	74_37	+1	known	missense	c.2002	p.D668Y	0.000	NULL	pfam_Reticulon,pfscan_Reticulon	-	no_errors	RTN3	HGNC	ENSG00000133318	tier1	-	-	43	0	0.00	29	3	9.09
RYR3	0	genome.wustl.edu	37	15	33895328	33895328	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	15	33895328	33895328	C	T	SNP	RYR3	ENST00000389232	human	ensembl	74_37	+1	known	missense	c.1927	p.R643W	1.000	pfscan_B30.2/SPRY	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838	tier1	-	-	38	0	0.00	22	12	35.29
SACS	0	genome.wustl.edu	37	13	23912160	23912160	+	Missense_Mutation	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	13	23912160	23912160	A	C	SNP	SACS	ENST00000382292	human	ensembl	74_37	-1	known	missense	c.5855	p.V1952G	0.998	NULL	pfam_HEPN,pfam_Ubiquitin_dom,superfamily_HATPase_ATP-bd,superfamily_DnaJ_domain,smart_HEPN,pfscan_HEPN,pfscan_DnaJ_domain,pfscan_Ubiquitin_supergroup	-	no_errors	SACS	HGNC	ENSG00000151835	tier1	-	-	32	0	0.00	19	28	59.57
SAFB2	0	genome.wustl.edu	37	19	5600224	5600224	+	Missense_Mutation	SNP	T	T	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	19	5600224	5600224	T	C	SNP	SAFB2	ENST00000252542	human	ensembl	74_37	-1	known	missense	c.1607	p.K536R	0.350	NULL	pfam_RRM_dom,pfam_SAP_dom,smart_SAP_dom,smart_RRM_dom,pfscan_SAP_dom,pfscan_RRM_dom	-	no_errors	SAFB2	HGNC	ENSG00000130254				62	0	0.00	36	2	5.26
SAGE1	0	genome.wustl.edu	37	X	134992321	134992321	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	X	134992321	134992321	G	A	SNP	SAGE1	ENST00000324447	human	ensembl	74_37	+1	known	missense	c.1856	p.R619K	0.085	NULL	NULL	-	no_errors	SAGE1	HGNC	ENSG00000181433	tier1	-	-	43	0	0.00	22	13	37.14
SAMD9L	0	genome.wustl.edu	37	7	92763467	92763467	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	7	92763467	92763467	G	T	SNP	SAMD9L	ENST00000318238	human	ensembl	74_37	-1	known	missense	c.1818	p.N606K	0.694	NULL	superfamily_SAM/pointed,superfamily_P-loop_NTPase,pfscan_SAM	-	no_errors	SAMD9L	HGNC	ENSG00000177409	tier1	-	-	79	0	0.00	66	4	5.71
SAP130	0	genome.wustl.edu	37	2	128757709	128757709	+	Silent	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	128757709	128757709	G	A	SNP	SAP130	ENST00000357702	human	ensembl	74_37	-1	known	silent	c.1107	p.F369	0.997	NULL	NULL	-	no_errors	SAP130	HGNC	ENSG00000136715				25	0	0.00	16	2	11.11
SCN10A	0	genome.wustl.edu	37	3	38783782	38783782	+	Silent	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	3	38783782	38783782	G	A	SNP	SCN10A	ENST00000449082	human	ensembl	74_37	-1	known	silent	c.2106	p.I702	0.998	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN10A	HGNC	ENSG00000185313	tier1	-	-	24	0	0.00	12	4	25.00
SDR16C5	0	genome.wustl.edu	37	8	57224771	57224771	+	Missense_Mutation	SNP	C	C	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	8	57224771	57224771	C	G	SNP	SDR16C5	ENST00000303749	human	ensembl	74_37	-1	known	missense	c.410	p.C137S	0.842	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR	-	no_errors	SDR16C5	HGNC	ENSG00000170786	tier1	-	-	77	0	0.00	25	36	59.02
SEC31B	0	genome.wustl.edu	37	10	102248621	102248621	+	Silent	SNP	A	A	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	10	102248621	102248621	A	G	SNP	SEC31B	ENST00000370345	human	ensembl	74_37	-1	known	silent	c.3282	p.T1094	0.077	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	SEC31B	HGNC	ENSG00000075826				55	0	0.00	35	3	7.89
SEPT2	0	genome.wustl.edu	37	2	242277134	242277134	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	242277134	242277134	G	T	SNP	SEPT2	ENST00000360051	human	ensembl	74_37	+1	known	missense	c.523	p.V175L	1.000	pfam_Cell_div_GTP-bd,superfamily_P-loop_NTPase,pirsf_Septin	pfam_Cell_div_GTP-bd,superfamily_P-loop_NTPase,pirsf_Septin,prints_Septin2	-	no_errors	SEPT2	HGNC	ENSG00000168385	tier1	-	-	48	0	0.00	47	5	9.43
SERF2	0	genome.wustl.edu	37	15	44069382	44069382	+	RNA	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	15	44069382	44069382	G	T	SNP	SERF2	ENST00000474290	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	SERF2	HGNC	ENSG00000140264	tier1	-	-	48	0	0.00	44	4	8.33
SERPINB9	0	genome.wustl.edu	37	6	2890645	2890645	+	Nonsense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	6	2890645	2890645	G	A	SNP	SERPINB9	ENST00000380698	human	ensembl	74_37	-1	known	nonsense	c.883	p.Q295*	0.000	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom,prints_Serpin_B9/Maspin	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom,prints_Serpin_B9/Maspin	-	no_errors	SERPINB9	HGNC	ENSG00000170542	tier1	-	-	71	0	0.00	48	4	7.69
SETDB2	0	genome.wustl.edu	37	13	50042008	50042008	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	13	50042008	50042008	C	T	SNP	SETDB2	ENST00000317257	human	ensembl	74_37	+1	known	missense	c.253	p.P85S	0.029	NULL	pfam_SET_dom,pfam_Pre-SET_dom,pfam_Methyl_CpG_DNA-bd,superfamily_DNA-bd_dom,smart_Methyl_CpG_DNA-bd,smart_Pre-SET_Zn-bd_sub,smart_SET_dom,pfscan_Methyl_CpG_DNA-bd,pfscan_SET_dom,pfscan_Pre-SET_dom	-	no_errors	SETDB2	HGNC	ENSG00000136169	tier1	-	-	52	0	0.00	63	4	5.97
SEZ6L	0	genome.wustl.edu	37	22	26688607	26688607	+	Silent	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	22	26688607	26688607	G	A	SNP	SEZ6L	ENST00000248933	human	ensembl	74_37	+1	known	silent	c.330	p.K110	0.000	NULL	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	SEZ6L	HGNC	ENSG00000100095	tier1	-	-	134	0	0.00	69	33	32.35
SIN3A	0	genome.wustl.edu	37	15	75705182	75705182	+	Silent	SNP	A	A	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	15	75705182	75705182	A	G	SNP	SIN3A	ENST00000360439	human	ensembl	74_37	-1	known	silent	c.678	p.H226	1.000	NULL	pfam_PAH,pfam_HDAC_interact,superfamily_PAH,smart_HDAC_interact	-	no_errors	SIN3A	HGNC	ENSG00000169375	tier1	-	-	59	0	0.00	66	14	17.50
SIPA1L1	0	genome.wustl.edu	37	14	72206004	72206004	+	RNA	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	14	72206004	72206004	G	A	SNP	SIPA1L1	ENST00000554874	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	SIPA1L1	HGNC	ENSG00000197555	tier1	-	-	73	0	0.00	32	4	11.11
SLC1A3	0	genome.wustl.edu	37	5	36608463	36608463	+	RNA	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	5	36608463	36608463	C	T	SNP	SLC1A3	ENST00000506725	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.049	-	-	-	no_errors	SLC1A3	HGNC	ENSG00000079215	tier1	-	-	38	0	0.00	41	15	26.79
SLC6A10P	0	genome.wustl.edu	37	16	32893398	32893398	+	RNA	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	16	32893398	32893398	A	C	SNP	SLC6A10P	ENST00000330048	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.980	-	-	-	no_errors	SLC6A10P	HGNC	ENSG00000214617	tier1	-	-	22	0	0.00	7	6	46.15
SLC6A2	0	genome.wustl.edu	37	16	55733505	55733505	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	16	55733505	55733505	G	A	SNP	SLC6A2	ENST00000219833	human	ensembl	74_37	+1	known	missense	c.1529	p.G510E	1.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_noradrenaline	-	no_errors	SLC6A2	HGNC	ENSG00000103546	tier1	-	-	92	0	0.00	56	17	23.29
SLC9A2	0	genome.wustl.edu	37	2	103321112	103321112	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	103321112	103321112	G	T	SNP	SLC9A2	ENST00000233969	human	ensembl	74_37	+1	known	missense	c.1955	p.S652I	0.997	NULL	pfam_Cation/H_exchanger,prints_Na/H_exchanger_2,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A2	HGNC	ENSG00000115616	tier1	-	-	52	0	0.00	33	4	10.81
SLC9A4	0	genome.wustl.edu	37	2	103148843	103148843	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	103148843	103148843	G	T	SNP	SLC9A4	ENST00000295269	human	ensembl	74_37	+1	known	missense	c.2093	p.R698L	0.000	NULL	pfam_Cation/H_exchanger,prints_NaH_exchanger,prints_Na/H_exchanger_2,tigrfam_NaH_exchanger	-	no_errors	SLC9A4	HGNC	ENSG00000180251				67	0	0.00	43	3	6.52
SLIT2	0	genome.wustl.edu	37	4	20569203	20569203	+	Silent	SNP	T	T	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	4	20569203	20569203	T	C	SNP	SLIT2	ENST00000504154	human	ensembl	74_37	+1	known	silent	c.2913	p.T971	0.984	pfam_EG-like_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_Laminin_G,pfam_Leu-rich_rpt,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl_sf,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Fol_N,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT2	HGNC	ENSG00000145147	tier1	-	-	65	0	0.00	27	14	34.15
SLITRK4	0	genome.wustl.edu	37	X	142718596	142718596	+	Missense_Mutation	SNP	T	T	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	X	142718596	142718596	T	G	SNP	SLITRK4	ENST00000338017	human	ensembl	74_37	-1	known	missense	c.329	p.K110T	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK4	HGNC	ENSG00000179542	tier1	-	-	54	0	0.00	24	20	45.45
SMARCC2	0	genome.wustl.edu	37	12	56557548	56557551	+	Frame_Shift_Del	DEL	GTCT	GTCT	-			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	GTCT	GTCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	12	56557548	56557551	GTCT	-	DEL	SMARCC2	ENST00000267064	human	ensembl	74_37	-1	known	frame_shift_del	c.3570_3569	p.D1190fs	1.000:1.000	NULL	pfam_SWIRM,pfam_SANT/Myb,superfamily_Homeodomain-like,superfamily_BRCT_dom,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_SANT/Myb,pfscan_SWIRM,pfscan_Myb-like_dom	-	no_errors	SMARCC2	HGNC	ENSG00000139613	tier1			84	0	0.00	56	27	32.53
SMPD3	0	genome.wustl.edu	37	16	68405587	68405587	+	Silent	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	16	68405587	68405587	C	T	SNP	SMPD3	ENST00000219334	human	ensembl	74_37	-1	known	silent	c.498	p.Q166	1.000	NULL	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase	-	no_errors	SMPD3	HGNC	ENSG00000103056				53	0	0.00	29	2	6.45
SNAP91	0	genome.wustl.edu	37	6	84265929	84265929	+	Silent	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	6	84265929	84265929	G	T	SNP	SNAP91	ENST00000369694	human	ensembl	74_37	-1	known	silent	c.2667	p.P889	1.000	NULL	pfam_ANTH_dom,pfam_Epsin_dom_N,superfamily_ENTH_VHS,smart_Epsin-like_N,pfscan_Epsin-like_N	-	no_errors	SNAP91	HGNC	ENSG00000065609				51	0	0.00	72	4	5.26
SNORA35	0	genome.wustl.edu	37	X	113865309	113865309	+	RNA	SNP	A	A	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	X	113865309	113865309	A	G	SNP	SNORA35	ENST00000386104	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SNORA35	HGNC	ENSG00000208839	tier1	-	-	18	0	0.00	14	12	46.15
SNORD114-19	0	genome.wustl.edu	37	14	101442866	101442866	+	RNA	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	14	101442866	101442866	G	A	SNP	SNORD114-19	ENST00000363072	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SNORD114-19	HGNC	ENSG00000199942	tier1	-	-	116	0	0.00	59	62	51.24
SNTG2	0	genome.wustl.edu	37	2	1271173	1271173	+	Silent	SNP	T	T	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	1271173	1271173	T	C	SNP	SNTG2	ENST00000308624	human	ensembl	74_37	+1	known	silent	c.1114	p.L372	0.938	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SNTG2	HGNC	ENSG00000172554	tier1	-	-	77	0	0.00	41	8	16.33
SNX21	0	genome.wustl.edu	37	20	44469672	44469672	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	20	44469672	44469672	G	A	SNP	SNX21	ENST00000491381	human	ensembl	74_37	+1	known	missense	c.842	p.R281H	0.580	NULL	pfam_Phox,pfam_TPR_1,superfamily_Phox,smart_Phox,pfscan_Phox	-	no_errors	SNX21	HGNC	ENSG00000124104	tier1	-	-	45	0	0.00	48	8	14.29
SNX33	0	genome.wustl.edu	37	15	75942122	75942122	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	15	75942122	75942122	C	T	SNP	SNX33	ENST00000308527	human	ensembl	74_37	+1	known	missense	c.679	p.P227S	1.000	superfamily_Phox,smart_Phox,pirsf_Snx9	pfam_Sorting_nexin_WASP-bd-dom,pfam_Phox,pfam_SH3_domain,pfam_SH3_2,superfamily_Phox,superfamily_SH3_domain,smart_SH3_domain,smart_Phox,pirsf_Snx9,pfscan_Phox,pfscan_SH3_domain	-	no_errors	SNX33	HGNC	ENSG00000173548	tier1	-	-	68	0	0.00	45	12	21.05
SORCS3	0	genome.wustl.edu	37	10	106907421	106907421	+	Missense_Mutation	SNP	T	T	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	10	106907421	106907421	T	C	SNP	SORCS3	ENST00000369701	human	ensembl	74_37	+1	known	missense	c.1349	p.V450A	1.000	smart_VPS10	pfam_PKD_dom,superfamily_PKD_dom,smart_VPS10,pfscan_PKD_dom	-	no_errors	SORCS3	HGNC	ENSG00000156395	tier1	-	-	74	0	0.00	44	13	22.81
SPHKAP	0	genome.wustl.edu	37	2	228883123	228883123	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	228883123	228883123	C	T	SNP	SPHKAP	ENST00000392056	human	ensembl	74_37	-1	known	missense	c.2447	p.R816H	0.000	NULL	pfam_AKAP_110_C	-	no_errors	SPHKAP	HGNC	ENSG00000153820	tier1	rs201425414	-	69	0	0.00	53	4	7.02
SPRED1	0	genome.wustl.edu	37	15	38545224	38545225	+	RNA	INS	-	-	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	15	38545224	38545225	-	G	INS	SPRED1	ENST00000561205	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.997:0.996	-	-	-	no_errors	SPRED1	HGNC	ENSG00000166068	tier1			26	0	0.00	15	6	28.57
SRSF1	0	genome.wustl.edu	37	17	56084379	56084379	+	Silent	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	17	56084379	56084379	G	A	SNP	SRSF1	ENST00000258962	human	ensembl	74_37	-1	known	silent	c.120	p.G40	0.998	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SRSF1	HGNC	ENSG00000136450				71	0	0.00	38	4	9.52
SSBP2	0	genome.wustl.edu	37	5	80762872	80762872	+	Missense_Mutation	SNP	A	A	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	5	80762872	80762872	A	T	SNP	SSBP2	ENST00000515395	human	ensembl	74_37	-1	novel	missense	c.493	p.L165I	1.000	NULL	smart_LisH_dimerisation,pfscan_LisH_dimerisation,prints_SSDP_DNA-bd	-	no_errors	SSBP2	HGNC	ENSG00000145687	tier1	-	-	70	0	0.00	40	20	33.33
ST3GAL6	0	genome.wustl.edu	37	3	98475373	98475373	+	RNA	SNP	T	T	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	3	98475373	98475373	T	C	SNP	ST3GAL6	ENST00000465004	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	ST3GAL6	HGNC	ENSG00000064225	tier1	-	-	23	0	0.00	10	4	28.57
STAG1	0	genome.wustl.edu	37	3	136240195	136240195	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	3	136240195	136240195	C	T	SNP	STAG1	ENST00000383202	human	ensembl	74_37	-1	known	missense	c.536	p.C179Y	1.000	pfam_STAG,superfamily_ARM-type_fold	pfam_STAG,superfamily_ARM-type_fold	-	no_errors	STAG1	HGNC	ENSG00000118007	tier1	-	-	64	0	0.00	52	4	7.14
STK25	0	genome.wustl.edu	37	2	242441080	242441080	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	242441080	242441080	C	T	SNP	STK25	ENST00000316586	human	ensembl	74_37	-1	known	missense	c.74	p.R25H	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	STK25	HGNC	ENSG00000115694				50	0	0.00	25	2	7.41
STX16	0	genome.wustl.edu	37	20	57251268	57251268	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	20	57251268	57251268	G	A	SNP	STX16	ENST00000361830	human	ensembl	74_37	+1	known	missense	c.899	p.R300Q	1.000	NULL	pfam_T_SNARE_dom,pfam_Syntaxin_N,superfamily_t-SNARE,smart_T_SNARE_dom,pfscan_T_SNARE_dom	-	no_errors	STX16	HGNC	ENSG00000124222	tier1	-	-	42	0	0.00	41	35	46.05
STX17	0	genome.wustl.edu	37	9	102691114	102691114	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	9	102691114	102691114	C	T	SNP	STX17	ENST00000259400	human	ensembl	74_37	+1	known	missense	c.178	p.R60C	1.000	superfamily_t-SNARE	pfam_T_SNARE_dom,superfamily_t-SNARE,smart_T_SNARE_dom,pfscan_T_SNARE_dom	-	no_errors	STX17	HGNC	ENSG00000136874	tier1	-	-	55	0	0.00	33	25	43.10
SVOPL	0	genome.wustl.edu	37	7	138279284	138279285	+	RNA	INS	-	-	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	7	138279284	138279285	-	A	INS	SVOPL	ENST00000463557	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.030:0.003	-	-	-	no_errors	SVOPL	HGNC	ENSG00000157703	tier1			114	0	0.00	58	16	21.62
SYNE1	0	genome.wustl.edu	37	6	152765647	152765647	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	6	152765647	152765647	C	T	SNP	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	missense	c.3736	p.E1246K	1.000	superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018	tier1	rs138915528	-	97	0	0.00	52	28	35.00
SYT17	0	genome.wustl.edu	37	16	19195254	19195254	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	16	19195254	19195254	G	T	SNP	SYT17	ENST00000355377	human	ensembl	74_37	+1	known	missense	c.736	p.G246W	0.650	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_Synaptotagmin	-	no_errors	SYT17	HGNC	ENSG00000103528				58	0	0.00	37	2	5.13
TAS2R60	0	genome.wustl.edu	37	7	143140667	143140667	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	7	143140667	143140667	C	T	SNP	TAS2R60	ENST00000332690	human	ensembl	74_37	+1	known	missense	c.122	p.A41V	0.000	pfam_TAS2_rcpt	pfam_TAS2_rcpt	-	no_errors	TAS2R60	HGNC	ENSG00000185899	tier1	-	-	76	0	0.00	29	23	43.40
TBC1D23	0	genome.wustl.edu	37	3	100039744	100039744	+	Missense_Mutation	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	3	100039744	100039744	A	C	SNP	TBC1D23	ENST00000394144	human	ensembl	74_37	+1	known	missense	c.1947	p.K649N	0.999	NULL	pfam_Rab-GTPase-TBC_dom,pfam_Rhodanese-like_dom,superfamily_Rab-GTPase-TBC_dom,superfamily_Rhodanese-like_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom,pfscan_Rhodanese-like_dom	-	no_errors	TBC1D23	HGNC	ENSG00000036054	tier1	-	-	41	0	0.00	31	8	20.51
TBC1D8	0	genome.wustl.edu	37	2	101654942	101654942	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	101654942	101654942	G	T	SNP	TBC1D8	ENST00000409318	human	ensembl	74_37	-1	known	missense	c.1256	p.T419N	0.000	NULL	pfam_Rab-GTPase-TBC_dom,pfam_GRAM,superfamily_Rab-GTPase-TBC_dom,smart_GRAM,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D8	HGNC	ENSG00000204634	tier1	-	-	37	0	0.00	14	18	56.25
TBX20	0	genome.wustl.edu	37	7	35244122	35244122	+	Missense_Mutation	SNP	T	T	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	7	35244122	35244122	T	G	SNP	TBX20	ENST00000408931	human	ensembl	74_37	-1	known	missense	c.963	p.E321D	0.981	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBX20	HGNC	ENSG00000164532	tier1	-	-	71	0	0.00	26	28	51.85
TGOLN2	0	genome.wustl.edu	37	2	85553696	85553696	+	Missense_Mutation	SNP	C	C	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	85553696	85553696	C	A	SNP	TGOLN2	ENST00000377386	human	ensembl	74_37	-1	known	missense	c.1159	p.A387S	1.000	NULL	NULL	-	no_errors	TGOLN2	HGNC	ENSG00000152291	tier1	-	-	41	0	0.00	11	8	42.11
THBD	0	genome.wustl.edu	37	20	23028837	23028837	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	20	23028837	23028837	G	T	SNP	THBD	ENST00000377103	human	ensembl	74_37	-1	known	missense	c.1305	p.D435E	0.015	pirsf_CD93/CD141,pfam_Tme5_EGF-like,smart_EG-like_dom	pirsf_CD93/CD141,pfam_Tme5_EGF-like,pfam_EGF-like_Ca-bd_dom,superfamily_C-type_lectin_fold,smart_C-type_lectin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,prints_Thrombomodulin,pfscan_C-type_lectin	-	no_errors	THBD	HGNC	ENSG00000178726	tier1	-	-	70	0	0.00	43	11	20.37
TIMELESS	0	genome.wustl.edu	37	12	56817448	56817448	+	Silent	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	12	56817448	56817448	C	T	SNP	TIMELESS	ENST00000553532	human	ensembl	74_37	-1	known	silent	c.2010	p.E670	0.863	NULL	pfam_TIMELESS_C,pfam_Timeless	-	no_errors	TIMELESS	HGNC	ENSG00000111602	tier1	-	-	28	0	0.00	17	3	15.00
TMPRSS11B	0	genome.wustl.edu	37	4	69100186	69100186	+	Missense_Mutation	SNP	A	A	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	4	69100186	69100186	A	G	SNP	TMPRSS11B	ENST00000332644	human	ensembl	74_37	-1	known	missense	c.464	p.L155P	0.020	pirsf_Pept_S1A_HAT/DESC1	pfam_Peptidase_S1,pfam_SEA_dom,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pirsf_Pept_S1A_HAT/DESC1,pfscan_SEA_dom,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	TMPRSS11B	HGNC	ENSG00000185873	tier1	-	-	68	0	0.00	39	9	18.75
TMPRSS15	0	genome.wustl.edu	37	21	19704467	19704467	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	21	19704467	19704467	G	T	SNP	TMPRSS15	ENST00000284885	human	ensembl	74_37	-1	known	missense	c.1588	p.L530M	0.992	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_Peptidase_S1,pfam_CUB_dom,pfam_MAM_dom,pfam_SEA_dom,pfam_LDrepeatLR_classA_rpt,pfam_Peptidase_S1A_nudel,pfam_SRCR,superfamily_Trypsin-like_Pept_dom,superfamily_ConA-like_lec_gl_sf,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,superfamily_Srcr_rcpt-rel,smart_SEA_dom,smart_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_MAM_dom,smart_Srcr_rcpt-rel,smart_Peptidase_S1,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_MAM_dom,pfscan_SEA_dom,pfscan_SRCR,pfscan_Peptidase_S1,prints_Peptidase_S1A,prints_LDrepeatLR_classA_rpt	-	no_errors	TMPRSS15	HGNC	ENSG00000154646	tier1	-	-	48	0	0.00	36	4	10.00
TNC	0	genome.wustl.edu	37	9	117826297	117826297	+	Missense_Mutation	SNP	C	C	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	9	117826297	117826297	C	A	SNP	TNC	ENST00000350763	human	ensembl	74_37	-1	known	missense	c.3538	p.A1180S	0.999	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNC	HGNC	ENSG00000041982	tier1	-	-	33	0	0.00	26	6	18.75
TNS1	0	genome.wustl.edu	37	2	218678420	218678420	+	Nonsense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	218678420	218678420	G	A	SNP	TNS1	ENST00000171887	human	ensembl	74_37	-1	known	nonsense	c.4537	p.Q1513*	1.000	pfam_SH2,smart_SH2,pfscan_SH2	pfam_PTB,pfam_Tensin_phosphatase_C2-dom,pfam_SH2,superfamily_C2_dom,smart_Tyr_Pase_cat,smart_SH2,smart_PTB/PI_dom,pfscan_SH2,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TNS1	HGNC	ENSG00000079308				55	0	0.00	30	2	6.25
TPH2	0	genome.wustl.edu	37	12	72366400	72366400	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	12	72366400	72366400	G	T	SNP	TPH2	ENST00000333850	human	ensembl	74_37	+1	known	missense	c.710	p.R237L	0.965	pfam_Aromatic-AA_hydroxylase_C,superfamily_Aromatic-AA_hydroxylase_C,pirsf_Tyrosine_3-monooxygenase-like,tigrfam_Trp_5_mOase	pfam_Aromatic-AA_hydroxylase_C,pfam_ACT_dom,superfamily_Aromatic-AA_hydroxylase_C,pirsf_Tyrosine_3-monooxygenase-like,prints_Aromatic-AA_hydroxylase_C,tigrfam_Trp_5_mOase	-	no_errors	TPH2	HGNC	ENSG00000139287	tier1	-	-	69	0	0.00	43	4	8.33
TPH2	0	genome.wustl.edu	37	12	72388269	72388269	+	Missense_Mutation	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	12	72388269	72388269	A	C	SNP	TPH2	ENST00000333850	human	ensembl	74_37	+1	known	missense	c.992	p.K331T	1.000	pfam_Aromatic-AA_hydroxylase_C,superfamily_Aromatic-AA_hydroxylase_C,pirsf_Tyrosine_3-monooxygenase-like,tigrfam_Trp_5_mOase	pfam_Aromatic-AA_hydroxylase_C,pfam_ACT_dom,superfamily_Aromatic-AA_hydroxylase_C,pirsf_Tyrosine_3-monooxygenase-like,prints_Aromatic-AA_hydroxylase_C,tigrfam_Trp_5_mOase	-	no_errors	TPH2	HGNC	ENSG00000139287	tier1	-	-	104	0	0.00	41	23	35.94
TRIM6-TRIM34	0	genome.wustl.edu	37	11	5626645	5626645	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	11	5626645	5626645	C	T	SNP	TRIM6-TRIM34	ENST00000354852	human	ensembl	74_37	+1	known	missense	c.682	p.R228W	0.987	NULL	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM6-TRIM34	HGNC	ENSG00000258588	tier1	-	-	60	0	0.00	15	23	60.53
TRIOBP	0	genome.wustl.edu	37	22	38151139	38151139	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	22	38151139	38151139	G	A	SNP	TRIOBP	ENST00000406386	human	ensembl	74_37	+1	known	missense	c.5519	p.R1840H	0.993	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	TRIOBP	HGNC	ENSG00000100106	tier1	-	-	27	0	0.00	19	15	44.12
TRPS1	0	genome.wustl.edu	37	8	116426999	116426999	+	Missense_Mutation	SNP	T	T	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	8	116426999	116426999	T	G	SNP	TRPS1	ENST00000395715	human	ensembl	74_37	-1	known	missense	c.3137	p.Q1046P	1.000	NULL	pfam_Znf_GATA,smart_Znf_C2H2-like,smart_Znf_GATA,pfscan_Znf_C2H2,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	TRPS1	HGNC	ENSG00000104447	tier1	-	-	71	0	0.00	43	11	20.37
TSPY2	0	genome.wustl.edu	37	Y	6114771	6114771	+	Silent	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	Y	6114771	6114771	C	T	SNP	TSPY2	ENST00000320701	human	ensembl	74_37	+1	known	silent	c.462	p.S154	0.775	pfam_NAP_family	pfam_NAP_family	-	no_errors	TSPY2	HGNC	ENSG00000168757	tier1	-	-	12	0	0.00	2	4	66.67
TTN	0	genome.wustl.edu	37	2	179402367	179402367	+	Silent	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	179402367	179402367	G	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	silent	c.91863	p.L30621	0.973	superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	93	0	0.00	65	26	28.57
TTN	0	genome.wustl.edu	37	2	179412266	179412266	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	179412266	179412266	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.86383	p.V28795I	1.000	pfam_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	38	0	0.00	23	8	25.81
TTN	0	genome.wustl.edu	37	2	179429645	179429645	+	Nonsense_Mutation	SNP	C	C	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	179429645	179429645	C	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	nonsense	c.73510	p.E24504*	0.966	superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	59	0	0.00	32	8	20.00
TTN	0	genome.wustl.edu	37	2	179472775	179472775	+	Missense_Mutation	SNP	T	T	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	179472775	179472775	T	G	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.45035	p.D15012A	1.000	pfam_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	36	0	0.00	20	8	28.57
TTN	0	genome.wustl.edu	37	2	179548772	179548772	+	Missense_Mutation	SNP	T	T	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	179548772	179548772	T	G	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.29028	p.K9676N	0.093	pfam_PPAK_motif,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	108	0	0.00	87	23	20.91
TTN	0	genome.wustl.edu	37	2	179614061	179614061	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	179614061	179614061	G	T	SNP	TTN	ENST00000360870	human	ensembl	74_37	-1	known	missense	c.13066	p.Q4356K	0.060	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Titin_Z,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	48	0	0.00	45	14	23.73
TUBA3C	0	genome.wustl.edu	37	13	19751310	19751310	+	Silent	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	13	19751310	19751310	G	T	SNP	TUBA3C	ENST00000400113	human	ensembl	74_37	-1	known	silent	c.813	p.T271	1.000	pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tub_FtsZ_C,smart_Tubulin/FtsZ_2-layer-sand-dom	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin,prints_Beta_tubulin	-	no_errors	TUBA3C	HGNC	ENSG00000198033	tier1	-	-	94	0	0.00	38	71	65.14
TXLNG	0	genome.wustl.edu	37	X	16850849	16850850	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	X	16850849	16850850	AG	-	DEL	TXLNG	ENST00000380122	human	ensembl	74_37	+1	known	frame_shift_del	c.968_969	p.R326fs	1.000:1.000	pfam_Taxilin_fam	pfam_Taxilin_fam	-	no_errors	TXLNG	HGNC	ENSG00000086712	tier1			48	0	0.00	18	3	14.29
UHRF1BP1L	0	genome.wustl.edu	37	12	100466569	100466569	+	Missense_Mutation	SNP	C	C	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	12	100466569	100466569	C	A	SNP	UHRF1BP1L	ENST00000279907	human	ensembl	74_37	-1	known	missense	c.1430	p.R477L	1.000	NULL	NULL	-	no_errors	UHRF1BP1L	HGNC	ENSG00000111647				79	0	0.00	75	4	5.06
ULK3	0	genome.wustl.edu	37	15	75134697	75134697	+	Missense_Mutation	SNP	A	A	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	15	75134697	75134697	A	G	SNP	ULK3	ENST00000440863	human	ensembl	74_37	-1	known	missense	c.167	p.V56A	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_MIT,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_MIT,pfscan_Prot_kinase_dom	-	no_errors	ULK3	HGNC	ENSG00000140474	tier1	-	-	47	0	0.00	36	4	10.00
UNC80	0	genome.wustl.edu	37	2	210704160	210704160	+	Silent	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	210704160	210704160	A	C	SNP	UNC80	ENST00000439458	human	ensembl	74_37	+1	known	silent	c.3256	p.R1086	0.978	NULL	NULL	-	no_errors	UNC80	HGNC	ENSG00000144406	tier1	-	-	62	0	0.00	41	15	26.79
UPF3A	0	genome.wustl.edu	37	13	115067491	115067491	+	Silent	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	13	115067491	115067491	G	A	SNP	UPF3A	ENST00000375299	human	ensembl	74_37	+1	known	silent	c.1293	p.L431	0.521	NULL	pfam_Nonsense_mediated_decay_UPF3	-	no_errors	UPF3A	HGNC	ENSG00000169062	tier1	-	-	44	0	0.00	36	7	16.28
USP42	0	genome.wustl.edu	37	7	6196639	6196639	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	7	6196639	6196639	G	A	SNP	USP42	ENST00000306177	human	ensembl	74_37	+1	known	missense	c.3896	p.R1299Q	0.199	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP42	HGNC	ENSG00000106346	tier1	-	-	58	0	0.00	31	16	34.04
VAT1L	0	genome.wustl.edu	37	16	77918635	77918635	+	Missense_Mutation	SNP	T	T	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	16	77918635	77918635	T	G	SNP	VAT1L	ENST00000302536	human	ensembl	74_37	+1	known	missense	c.1013	p.L338R	1.000	smart_PKS_ER	pfam_ADH_GroES-like,pfam_ADH_C,superfamily_GroES-like,smart_PKS_ER	-	no_errors	VAT1L	HGNC	ENSG00000171724	tier1	-	-	80	0	0.00	41	13	24.07
WASF2	0	genome.wustl.edu	37	1	27736419	27736419	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	1	27736419	27736419	G	T	SNP	WASF2	ENST00000430629	human	ensembl	74_37	-1	known	missense	c.1106	p.P369Q	1.000	NULL	pfam_WH2_dom,smart_WH2_dom,pfscan_WH2_dom	-	no_errors	WASF2	HGNC	ENSG00000158195				101	0	0.00	62	4	6.06
WASH6P	0	genome.wustl.edu	37	X	155250630	155250630	+	RNA	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	X	155250630	155250630	G	T	SNP	WASH6P	ENST00000476066	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.022	-	-	-	no_errors	WASH6P	HGNC	ENSG00000182484	tier1	-	-	180	0	0.00	87	32	26.89
WDR17	0	genome.wustl.edu	37	4	177095823	177095823	+	Missense_Mutation	SNP	A	A	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	4	177095823	177095823	A	G	SNP	WDR17	ENST00000280190	human	ensembl	74_37	+1	known	missense	c.3520	p.R1174G	0.980	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR17	HGNC	ENSG00000150627	tier1	-	-	119	0	0.00	39	4	9.30
WDR33	0	genome.wustl.edu	37	2	128477228	128477228	+	Frame_Shift_Del	DEL	G	G	-			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	128477228	128477228	G	-	DEL	WDR33	ENST00000322313	human	ensembl	74_37	-1	known	frame_shift_del	c.2371	p.R791fs	1.000	NULL	pfam_WD40_repeat,pfam_Collagen,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR33	HGNC	ENSG00000136709	tier1			41	0	0.00	25	2	7.41
WHSC1L1	0	genome.wustl.edu	37	8	38187059	38187059	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	8	38187059	38187059	G	T	SNP	WHSC1L1	ENST00000317025	human	ensembl	74_37	-1	known	missense	c.1418	p.A473E	1.000	NULL	pfam_PWWP_dom,pfam_SET_dom,superfamily_Znf_FYVE_PHD,smart_PWWP_dom,smart_Znf_PHD,smart_AWS,smart_SET_dom,smart_Post-SET_dom,pfscan_AWS,pfscan_PWWP_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger	-	no_errors	WHSC1L1	HGNC	ENSG00000147548	tier1	-	-	100	0	0.00	91	6	6.19
XDH	0	genome.wustl.edu	37	2	31598302	31598302	+	Missense_Mutation	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	2	31598302	31598302	A	C	SNP	XDH	ENST00000379416	human	ensembl	74_37	-1	known	missense	c.1546	p.F516V	1.000	pfam_CO_DH_flav_C,superfamily_CO_DH_flav_C,pirsf_Ald_Oxase/xanthine_DH,tigrfam_Xanthine_DH_ssu	pfam_AldOxase/xan_DH_Mopterin-bd,pfam_Mopterin_DH_FAD-bd,pfam_Ald_Oxase/Xan_DH_a/b,pfam_2Fe-2S-bd,pfam_CO_DH_flav_C,pfam_2Fe-2S_ferredoxin-type,superfamily_AldOxase/xan_DH_Mopterin-bd,superfamily_FAD-bd_2,superfamily_Ald_Oxase/Xan_DH_a/b,superfamily_2Fe-2S-bd,superfamily_CO_DH_flav_C,superfamily_2Fe-2S_ferredoxin-type,pirsf_Ald_Oxase/xanthine_DH,pfscan_2Fe-2S_ferredoxin-type,tigrfam_Xanthine_DH_ssu	-	no_errors	XDH	HGNC	ENSG00000158125	tier1	-	-	47	0	0.00	34	8	19.05
XIRP1	0	genome.wustl.edu	37	3	39229334	39229334	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	3	39229334	39229334	G	A	SNP	XIRP1	ENST00000340369	human	ensembl	74_37	-1	known	missense	c.1603	p.R535W	0.994	NULL	pfam_Actin-binding_Xin_repeat	-	no_errors	XIRP1	HGNC	ENSG00000168334	tier1	-	-	68	0	0.00	40	10	20.00
XIST	0	genome.wustl.edu	37	X	73062940	73062940	+	RNA	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	X	73062940	73062940	A	C	SNP	XIST	ENST00000429829	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	XIST	HGNC	ENSG00000229807	tier1	-	-	25	0	0.00	24	6	19.35
XPC	0	genome.wustl.edu	37	3	14187441	14187441	+	Nonstop_Mutation	SNP	T	T	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	3	14187441	14187441	T	C	SNP	XPC	ENST00000285021	human	ensembl	74_37	-1	known	nonstop	c.2823	p.*941W	0.998	NULL	pfam_Rad4/PNGase_transGLS-fold,pfam_Rad4_beta-hairpin_dom3,pfam_Rad4_beta-hairpin_dom2,pfam_Rad4_beta-hairpin_dom1,tigrfam_DNA_repair_Rad4_subgr	-	no_errors	XPC	HGNC	ENSG00000154767	tier1	-	-	41	0	0.00	27	4	12.90
ZBTB20	0	genome.wustl.edu	37	3	114057910	114057910	+	Missense_Mutation	SNP	T	T	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	3	114057910	114057910	T	G	SNP	ZBTB20	ENST00000474710	human	ensembl	74_37	-1	known	missense	c.2168	p.K723T	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB20	HGNC	ENSG00000181722	tier1	-	-	41	0	0.00	30	8	21.05
ZBTB7B	0	genome.wustl.edu	37	1	154987712	154987712	+	Silent	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	1	154987712	154987712	G	T	SNP	ZBTB7B	ENST00000417934	human	ensembl	74_37	+1	known	silent	c.678	p.P226	0.046	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB7B	HGNC	ENSG00000160685				49	0	0.00	34	3	8.11
ZC3H10	0	genome.wustl.edu	37	12	56515093	56515093	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	12	56515093	56515093	G	T	SNP	ZC3H10	ENST00000257940	human	ensembl	74_37	+1	known	missense	c.747	p.K249N	1.000	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H10	HGNC	ENSG00000135482	tier1	-	-	47	0	0.00	45	4	8.16
ZFHX4	0	genome.wustl.edu	37	8	77617713	77617713	+	Missense_Mutation	SNP	A	A	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	8	77617713	77617713	A	G	SNP	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	missense	c.1390	p.S464G	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656				16	0	0.00	14	3	17.65
ZFP30	0	genome.wustl.edu	37	19	38126486	38126486	+	Missense_Mutation	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	19	38126486	38126486	A	C	SNP	ZFP30	ENST00000351218	human	ensembl	74_37	-1	known	missense	c.956	p.L319R	0.930	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZFP30	HGNC	ENSG00000120784	tier1	-	-	64	0	0.00	39	15	27.78
ZFPM2	0	genome.wustl.edu	37	8	106813335	106813335	+	Missense_Mutation	SNP	A	A	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	8	106813335	106813335	A	C	SNP	ZFPM2	ENST00000407775	human	ensembl	74_37	+1	known	missense	c.1025	p.Y342S	1.000	smart_Znf_C2H2-like	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFPM2	HGNC	ENSG00000169946	tier1	-	-	66	0	0.00	43	8	15.69
ZNF251	0	genome.wustl.edu	37	8	145979173	145979174	+	Frame_Shift_Ins	INS	-	-	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	8	145979173	145979174	-	A	INS	ZNF251	ENST00000292562	human	ensembl	74_37	-1	known	frame_shift_ins	c.172_171	p.V57fs	0.159:0.156	superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF251	HGNC	ENSG00000198169	tier1			28	0	0.00	23	5	17.86
ZNF304	0	genome.wustl.edu	37	19	57868215	57868215	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	19	57868215	57868215	G	T	SNP	ZNF304	ENST00000282286	human	ensembl	74_37	+1	known	missense	c.978	p.Q326H	0.993	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF304	HGNC	ENSG00000131845				59	0	0.00	54	4	6.90
ZNF486	0	genome.wustl.edu	37	19	20308762	20308762	+	Missense_Mutation	SNP	T	T	C			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	19	20308762	20308762	T	C	SNP	ZNF486	ENST00000335117	human	ensembl	74_37	+1	known	missense	c.1243	p.Y415H	0.039	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF486	HGNC	ENSG00000256229	tier1	-	-	55	0	0.00	35	20	36.36
ZNF578	0	genome.wustl.edu	37	19	52960340	52960340	+	RNA	SNP	T	T	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	19	52960340	52960340	T	A	SNP	ZNF578	ENST00000596382	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.072	-	-	-	no_errors	ZNF578	HGNC	ENSG00000258405	tier1	-	-	23	0	0.00	13	4	23.53
ZNF681	0	genome.wustl.edu	37	19	23927700	23927700	+	Silent	SNP	T	T	G			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	19	23927700	23927700	T	G	SNP	ZNF681	ENST00000402377	human	ensembl	74_37	-1	known	silent	c.652	p.R218	0.100	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF681	HGNC	ENSG00000196172	tier1	-	-	92	0	0.00	57	28	32.94
ZNF746	0	genome.wustl.edu	37	7	149190005	149190005	+	Nonsense_Mutation	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	7	149190005	149190005	G	T	SNP	ZNF746	ENST00000458143	human	ensembl	74_37	-1	known	nonsense	c.465	p.C155*	0.891	smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_DUF3669_Znf,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF746	HGNC	ENSG00000181220	tier1	-	-	132	0	0.00	52	4	7.14
ZNF831	0	genome.wustl.edu	37	20	57767649	57767650	+	Frame_Shift_Ins	INS	-	-	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	20	57767649	57767650	-	T	INS	ZNF831	ENST00000371030	human	ensembl	74_37	+1	novel	frame_shift_ins	c.1575_1576	p.W525fs	0.000:0.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF831	HGNC	ENSG00000124203	tier1			12	0	0.00	8	5	38.46
ZNF90	0	genome.wustl.edu	37	19	20191096	20191096	+	RNA	SNP	G	G	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	19	20191096	20191096	G	T	SNP	ZNF90	ENST00000492328	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ZNF90	HGNC	ENSG00000213988	tier1	-	-	31	0	0.00	25	4	13.79
ZNF99	0	genome.wustl.edu	37	19	22940806	22940806	+	Silent	SNP	G	G	A			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	19	22940806	22940806	G	A	SNP	ZNF99	ENST00000397104	human	ensembl	74_37	-1	known	silent	c.1632	p.T544	0.112	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF99	HGNC	ENSG00000213973				64	0	0.00	49	4	7.55
ZP3	0	genome.wustl.edu	37	7	76069838	76069838	+	Nonsense_Mutation	SNP	A	A	T			TCGA-2H-A9GI-01A-11D-A37C-09	TCGA-2H-A9GI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e1398379-1db8-45d7-8512-843ee72e41e4	318a6760-71e3-46d3-a95e-9ea2e338161b	7	76069838	76069838	A	T	SNP	ZP3	ENST00000394857	human	ensembl	74_37	+1	known	nonsense	c.970	p.K324*	0.000	NULL	pfam_ZP_dom,smart_ZP_dom,pfscan_ZP_dom,prints_ZP_dom	-	no_errors	ZP3	HGNC	ENSG00000188372	tier1	-	-	88	0	0.00	63	12	16.00
