Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ABCC12	0	genome.wustl.edu	37	16	48139202	48139202	+	Missense_Mutation	SNP	C	C	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	16	48139202	48139202	C	G	SNP	ABCC12	ENST00000311303	human	ensembl	74_37	-1	known	missense	c.2521	p.A841P	0.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC12	HGNC	ENSG00000140798				37	0	0.00	14	2	12.50
ABCC8	0	genome.wustl.edu	37	11	17483280	17483280	+	Silent	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	11	17483280	17483280	C	T	SNP	ABCC8	ENST00000302539	human	ensembl	74_37	-1	known	silent	c.672	p.L224	1.000	prints_Sulphorea_rcpt	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,prints_Sulphorea_rcpt,prints_Surea_rcpt-1,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC8	HGNC	ENSG00000006071	tier1	-	-	44	0	0.00	34	16	32.00
ABCG2	0	genome.wustl.edu	37	4	89052313	89052313	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	4	89052313	89052313	G	A	SNP	ABCG2	ENST00000237612	human	ensembl	74_37	-1	known	missense	c.431	p.A144V	1.000	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_2_trans,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCG2	HGNC	ENSG00000118777				45	0	0.00	26	2	6.90
ABCG5	0	genome.wustl.edu	37	2	44055245	44055245	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	2	44055245	44055245	C	T	SNP	ABCG5	ENST00000260645	human	ensembl	74_37	-1	known	missense	c.511	p.V171I	0.976	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_2_trans,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCG5	HGNC	ENSG00000138075				36	0	0.00	45	3	6.25
ABHD16B	0	genome.wustl.edu	37	20	62493771	62493771	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	20	62493771	62493771	G	A	SNP	ABHD16B	ENST00000369916	human	ensembl	74_37	+1	known	missense	c.878	p.R293H	1.000	pfam_AB_hydrolase_1	pfam_AB_hydrolase_1	-	no_errors	ABHD16B	HGNC	ENSG00000183260	tier1	rs144773464	-	60	0	0.00	86	6	6.52
ACAN	0	genome.wustl.edu	37	15	89398111	89398111	+	Silent	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	15	89398111	89398111	C	T	SNP	ACAN	ENST00000439576	human	ensembl	74_37	+1	known	silent	c.2295	p.G765	0.000	NULL	pfam_Link,pfam_C-type_lectin,pfam_Ig_V-set,pfam_Sushi_SCR_CCP,pfam_EG-like_dom,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Link,smart_EG-like_dom,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like_dom,prints_Link	-	no_errors	ACAN	HGNC	ENSG00000157766	tier1	-	-	91	0	0.00	49	48	49.48
ACOT9	0	genome.wustl.edu	37	X	23722811	23722811	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	X	23722811	23722811	C	T	SNP	ACOT9	ENST00000379303	human	ensembl	74_37	-1	known	missense	c.1258	p.E420K	1.000	NULL	pfam_Thioestr_supf	-	no_errors	ACOT9	HGNC	ENSG00000123130	tier1	-	-	49	0	0.00	1	23	95.83
ACSBG1	0	genome.wustl.edu	37	15	78473257	78473257	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	15	78473257	78473257	G	A	SNP	ACSBG1	ENST00000258873	human	ensembl	74_37	-1	known	missense	c.1093	p.R365W	1.000	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSBG1	HGNC	ENSG00000103740				27	0	0.00	33	2	5.71
ADAM21P1	0	genome.wustl.edu	37	14	70714087	70714087	+	RNA	SNP	T	T	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	14	70714087	70714087	T	G	SNP	ADAM21P1	ENST00000530196	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	ADAM21P1	HGNC	ENSG00000235812				54	0	0.00	45	6	11.76
ADCK1	0	genome.wustl.edu	37	14	78399575	78399575	+	Silent	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	14	78399575	78399575	G	A	SNP	ADCK1	ENST00000238561	human	ensembl	74_37	+1	known	silent	c.1413	p.K471	0.998	NULL	pfam_UbiB_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom	-	no_errors	ADCK1	HGNC	ENSG00000063761	tier1	-	-	75	0	0.00	71	4	5.33
ADD3	0	genome.wustl.edu	37	10	111886193	111886193	+	Missense_Mutation	SNP	T	T	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	10	111886193	111886193	T	A	SNP	ADD3	ENST00000356080	human	ensembl	74_37	+1	known	missense	c.1540	p.Y514N	0.675	NULL	pfam_Aldolase_II/adducin_N,superfamily_Aldolase_II/adducin_N	-	no_errors	ADD3	HGNC	ENSG00000148700	tier1	-	-	79	0	0.00	72	4	5.26
ADRA1D	0	genome.wustl.edu	37	20	4228553	4228553	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	20	4228553	4228553	G	A	SNP	ADRA1D	ENST00000379453	human	ensembl	74_37	-1	known	missense	c.1052	p.A351V	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,prints_ADRA1D_rcpt,prints_GPCR_Rhodpsn,prints_ADR_fam,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	ADRA1D	HGNC	ENSG00000171873				46	0	0.00	69	4	5.48
AEBP1	0	genome.wustl.edu	37	7	44153807	44153807	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	7	44153807	44153807	G	A	SNP	AEBP1	ENST00000223357	human	ensembl	74_37	+1	known	missense	c.3424	p.A1142T	0.001	NULL	pfam_Peptidase_M14,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_CarboxyPept-like_regulatory,smart_Coagulation_fac_5/8-C_type_dom,smart_Peptidase_M14,pfscan_Coagulation_fac_5/8-C_type_dom,prints_Peptidase_M14	-	no_errors	AEBP1	HGNC	ENSG00000106624	tier1	-	-	31	0	0.00	39	4	9.30
AGO2	0	genome.wustl.edu	37	8	141566294	141566294	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	8	141566294	141566294	G	A	SNP	AGO2	ENST00000220592	human	ensembl	74_37	-1	known	missense	c.1118	p.P373L	1.000	superfamily_PAZ_dom	pfam_Piwi,pfam_PAZ_dom,pfam_DUF1785,superfamily_RNaseH-like_dom,superfamily_PAZ_dom,smart_PAZ_dom,smart_Piwi,pfscan_PAZ_dom,pfscan_Piwi	-	no_errors	AGO2	HGNC	ENSG00000123908	tier1	-	-	69	0	0.00	75	4	5.06
AHCTF1	0	genome.wustl.edu	37	1	247040319	247040319	+	Missense_Mutation	SNP	T	T	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	1	247040319	247040319	T	C	SNP	AHCTF1	ENST00000326225	human	ensembl	74_37	-1	known	missense	c.2897	p.H966R	1.000	NULL	superfamily_Quinonprotein_ADH-like_supfam	-	no_errors	AHCTF1	HGNC	ENSG00000153207	tier1	-	-	47	0	0.00	43	25	36.23
ALDH16A1	0	genome.wustl.edu	37	19	49963104	49963104	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	19	49963104	49963104	G	T	SNP	ALDH16A1	ENST00000293350	human	ensembl	74_37	+1	known	missense	c.498	p.M166I	0.997	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH,pirsf_Aldehyde_DH	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH,pirsf_Aldehyde_DH	-	no_errors	ALDH16A1	HGNC	ENSG00000161618	tier1	-	-	80	0	0.00	7	50	87.72
ALG5	0	genome.wustl.edu	37	13	37563639	37563639	+	Frame_Shift_Del	DEL	T	T	-			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	13	37563639	37563639	T	-	DEL	ALG5	ENST00000239891	human	ensembl	74_37	-1	known	frame_shift_del	c.429	p.G144fs	1.000	pfam_Glyco_trans_2	pfam_Glyco_trans_2	-	no_errors	ALG5	HGNC	ENSG00000120697	tier1			43	0	0.00	32	3	8.57
AMBRA1	0	genome.wustl.edu	37	11	46563567	46563567	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	11	46563567	46563567	G	T	SNP	AMBRA1	ENST00000458649	human	ensembl	74_37	-1	known	missense	c.2000	p.S667Y	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	AMBRA1	HGNC	ENSG00000110497	tier1	-	-	56	0	0.00	43	4	8.51
AMOTL2	0	genome.wustl.edu	37	3	134079164	134079164	+	Missense_Mutation	SNP	T	T	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	3	134079164	134079164	T	C	SNP	AMOTL2	ENST00000249883	human	ensembl	74_37	-1	known	missense	c.1667	p.E556G	1.000	pfam_Angiomotin_C	pfam_Angiomotin_C,prints_Angiomotin	-	no_errors	AMOTL2	HGNC	ENSG00000114019	tier1	-	-	62	0	0.00	33	19	36.54
ANGPT4	0	genome.wustl.edu	37	20	853726	853726	+	Silent	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	20	853726	853726	G	A	SNP	ANGPT4	ENST00000381922	human	ensembl	74_37	-1	known	silent	c.1389	p.N463	0.183	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	-	no_errors	ANGPT4	HGNC	ENSG00000101280	tier1	-	-	35	0	0.00	36	17	32.08
ANKFY1	0	genome.wustl.edu	37	17	4098337	4098337	+	Missense_Mutation	SNP	C	C	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	17	4098337	4098337	C	A	SNP	ANKFY1	ENST00000570535	human	ensembl	74_37	-1	known	missense	c.1434	p.E478D	0.996	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_Znf_FYVE,pfam_BTB_POZ,superfamily_Ankyrin_rpt-contain_dom,superfamily_BTB/POZ_fold,superfamily_Znf_FYVE_PHD,smart_BTB/POZ-like,smart_Ankyrin_rpt,smart_Znf_FYVE,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_BTB/POZ-like,pfscan_Znf_FYVE-rel,prints_Ankyrin_rpt	-	no_errors	ANKFY1	HGNC	ENSG00000185722	tier1	-	-	36	0	0.00	4	14	77.78
ANKRD30B	0	genome.wustl.edu	37	18	14764088	14764088	+	Silent	SNP	T	T	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	18	14764088	14764088	T	C	SNP	ANKRD30B	ENST00000358984	human	ensembl	74_37	+1	known	silent	c.1224	p.N408	0.004	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD30B	HGNC	ENSG00000180777	tier1	-	-	36	0	0.00	27	12	30.77
ANKUB1	0	genome.wustl.edu	37	3	149488371	149488371	+	Missense_Mutation	SNP	A	A	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	3	149488371	149488371	A	G	SNP	ANKUB1	ENST00000446160	human	ensembl	74_37	-1	known	missense	c.542	p.L181S	1.000	superfamily_Ankyrin_rpt-contain_dom	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ubiquitin_supergroup	-	no_errors	ANKUB1	HGNC	ENSG00000206199	tier1	-	-	65	0	0.00	57	4	6.56
ARHGEF3	0	genome.wustl.edu	37	3	57041294	57041294	+	Missense_Mutation	SNP	T	T	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	3	57041294	57041294	T	G	SNP	ARHGEF3	ENST00000477833	human	ensembl	74_37	-1	known	missense	c.133	p.K45Q	0.181	NULL	NULL	-	no_errors	ARHGEF3	HGNC	ENSG00000163947	tier1	-	-	64	0	0.00	34	18	34.62
ARPP21	0	genome.wustl.edu	37	3	35750536	35750536	+	Missense_Mutation	SNP	G	G	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	3	35750536	35750536	G	C	SNP	ARPP21	ENST00000187397	human	ensembl	74_37	+1	known	missense	c.871	p.V291L	1.000	NULL	pfam_R3H_ss-bd,smart_R3H_ss-bd,pfscan_R3H_ss-bd	-	no_errors	ARPP21	HGNC	ENSG00000172995	tier1	-	-	30	0	0.00	19	10	34.48
ARRDC4	0	genome.wustl.edu	37	15	98504124	98504124	+	Frame_Shift_Del	DEL	G	G	-			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	15	98504124	98504124	G	-	DEL	ARRDC4	ENST00000268042	human	ensembl	74_37	+1	known	frame_shift_del	c.33	p.G12fs	0.662	NULL	pfam_Arrestin-like_N,pfam_Arrestin_C-like,superfamily_Ig_E-set	-	no_errors	ARRDC4	HGNC	ENSG00000140450	tier1			29	0	0.00	24	4	14.29
ASXL3	0	genome.wustl.edu	37	18	31325003	31325003	+	Missense_Mutation	SNP	C	C	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	18	31325003	31325003	C	A	SNP	ASXL3	ENST00000269197	human	ensembl	74_37	+1	known	missense	c.5191	p.P1731T	0.552	NULL	superfamily_Znf_FYVE_PHD	-	no_errors	ASXL3	HGNC	ENSG00000141431	tier1	-	-	31	0	0.00	35	21	37.50
ATG2A	0	genome.wustl.edu	37	11	64678099	64678099	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	11	64678099	64678099	G	A	SNP	ATG2A	ENST00000421419	human	ensembl	74_37	-1	known	missense	c.1696	p.R566C	0.964	NULL	pfam_Autophagy-rel_C	-	no_errors	ATG2A	HGNC	ENSG00000110046	tier1	rs140600460	-	69	0	0.00	73	35	32.11
ATP2B3	0	genome.wustl.edu	37	X	152835148	152835148	+	Splice_Site	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	X	152835148	152835148	G	A	SNP	ATP2B3	ENST00000496610	human	ensembl	74_37	+1	known	splice_site	c.NULL	NULL	1.000	-	-	-	no_errors	ATP2B3	HGNC	ENSG00000067842	tier1	-	-	34	0	0.00	4	29	87.88
BARD1	0	genome.wustl.edu	37	2	215646099	215646099	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	2	215646099	215646099	G	T	SNP	BARD1	ENST00000260947	human	ensembl	74_37	-1	known	missense	c.499	p.P167T	0.720	NULL	pfam_Ankyrin_rpt,pfam_BRCT_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_BRCT_dom,smart_Ankyrin_rpt,smart_BRCT_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_BRCT_dom,pfscan_Znf_RING,prints_Ankyrin_rpt	-	no_errors	BARD1	HGNC	ENSG00000138376	tier1	-	-	79	0	0.00	79	5	5.95
BIRC6	0	genome.wustl.edu	37	2	32640482	32640482	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	2	32640482	32640482	C	T	SNP	BIRC6	ENST00000421745	human	ensembl	74_37	+1	known	missense	c.2123	p.S708F	1.000	NULL	pfam_DUF3643,pfam_UBQ-conjugat_E2,pfam_BIR,pfam_UEV_N,superfamily_UBQ-conjugating_enzyme/RWD,superfamily_Galactose-bd-like,superfamily_WD40_repeat_dom,smart_BIR,pfscan_BIR,pfscan_UBQ-conjugat_E2	-	no_errors	BIRC6	HGNC	ENSG00000115760	tier1	-	-	40	0	0.00	39	15	27.78
BPIFB2	0	genome.wustl.edu	37	20	31601666	31601666	+	Missense_Mutation	SNP	C	C	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	20	31601666	31601666	C	A	SNP	BPIFB2	ENST00000170150	human	ensembl	74_37	+1	known	missense	c.359	p.T120N	0.000	pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom	pfam_Lipid-bd_serum_glycop_C,pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_C	-	no_errors	BPIFB2	HGNC	ENSG00000078898	tier1	-	-	42	0	0.00	42	30	41.67
BTRC	0	genome.wustl.edu	37	10	103291061	103291061	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	10	103291061	103291061	C	T	SNP	BTRC	ENST00000370187	human	ensembl	74_37	+1	known	missense	c.811	p.L271F	1.000	superfamily_F-box_dom	pfam_WD40_repeat,pfam_Beta-TrCP_D,pfam_F-box_dom,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_F-box_dom,smart_WD40_repeat,pfscan_F-box_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	BTRC	HGNC	ENSG00000166167	tier1	-	-	44	0	0.00	40	9	18.37
C12orf4	0	genome.wustl.edu	37	12	4639200	4639200	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	12	4639200	4639200	G	A	SNP	C12orf4	ENST00000261250	human	ensembl	74_37	-1	known	missense	c.341	p.A114V	0.996	pfam_DUF2362	pfam_DUF2362	-	no_errors	C12orf4	HGNC	ENSG00000047621	tier1	-	-	69	0	0.00	79	5	5.95
C1QTNF3	0	genome.wustl.edu	37	5	34020796	34020796	+	Missense_Mutation	SNP	C	C	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	5	34020796	34020796	C	A	SNP	C1QTNF3	ENST00000382065	human	ensembl	74_37	-1	known	missense	c.852	p.K284N	1.000	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QTNF3	HGNC	ENSG00000082196	tier1	-	-	34	0	0.00	38	11	22.45
C1RL-AS1	0	genome.wustl.edu	37	12	7273293	7273293	+	RNA	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	12	7273293	7273293	G	A	SNP	C1RL-AS1	ENST00000382215	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	C1RL-AS1	HGNC	ENSG00000205885	tier1	-	-	36	0	0.00	28	12	30.00
C21orf58	0	genome.wustl.edu	37	21	47721985	47721986	+	In_Frame_Ins	INS	-	-	TGG			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	21	47721985	47721986	-	TGG	INS	C21orf58	ENST00000291691	human	ensembl	74_37	-1	known	in_frame_ins	c.897_896	p.300in_frame_insH	0.000:0.001	NULL	NULL	-	no_errors	C21orf58	HGNC	ENSG00000160298	tier1			12	0	0.00	11	12	52.17
C3orf27	0	genome.wustl.edu	37	3	128292319	128292320	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	3	128292319	128292320	TC	-	DEL	C3orf27	ENST00000356020	human	ensembl	74_37	-1	known	frame_shift_del	c.254_253	p.D85fs	0.075:0.076	NULL	NULL	-	no_errors	C3orf27	HGNC	ENSG00000198685	tier1			35	0	0.00	27	3	10.00
CASP1	0	genome.wustl.edu	37	11	104904982	104904982	+	Missense_Mutation	SNP	A	A	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	11	104904982	104904982	A	C	SNP	CASP1	ENST00000436863	human	ensembl	74_37	-1	known	missense	c.227	p.I76S	0.011	pfam_CARD,superfamily_DEATH-like_dom,smart_CARD,pirsf_Caspase_IL-1_beta,pfscan_CARD	pfam_Pept_C14_caspase,pfam_CARD,superfamily_DEATH-like_dom,smart_CARD,smart_Pept_C14A_p45_core,pirsf_Caspase_IL-1_beta,pfscan_CARD,pfscan_Pept_C14_p10,pfscan_Pept_C14_ICE_p20,prints_Pept_C14A_p45_core	-	no_errors	CASP1	HGNC	ENSG00000137752	tier1	-	-	128	0	0.00	85	99	53.80
CCDC136	0	genome.wustl.edu	37	7	128454917	128454917	+	Frame_Shift_Del	DEL	A	A	-			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	7	128454917	128454917	A	-	DEL	CCDC136	ENST00000297788	human	ensembl	74_37	+1	known	frame_shift_del	c.2989	p.K998fs	0.153	NULL	NULL	-	no_errors	CCDC136	HGNC	ENSG00000128596	tier1			43	0	0.00	37	2	5.13
CCDC144NL	0	genome.wustl.edu	37	17	20768734	20768734	+	Silent	SNP	T	T	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	17	20768734	20768734	T	C	SNP	CCDC144NL	ENST00000327925	human	ensembl	74_37	-1	known	silent	c.660	p.V220	0.008	NULL	NULL	-	no_errors	CCDC144NL	HGNC	ENSG00000205212				58	0	0.00	50	4	7.41
CCDC63	0	genome.wustl.edu	37	12	111296453	111296453	+	Silent	SNP	A	A	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	12	111296453	111296453	A	G	SNP	CCDC63	ENST00000308208	human	ensembl	74_37	+1	known	silent	c.243	p.K81	0.980	NULL	NULL	-	no_errors	CCDC63	HGNC	ENSG00000173093	tier1	-	-	41	0	0.00	5	37	88.10
CCL22	0	genome.wustl.edu	37	16	57394440	57394440	+	Nonsense_Mutation	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	16	57394440	57394440	G	A	SNP	CCL22	ENST00000219235	human	ensembl	74_37	+1	known	nonsense	c.165	p.W55*	0.998	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	-	no_errors	CCL22	HGNC	ENSG00000102962	tier1	rs200292277	-	155	0	0.00	68	104	60.47
CCP110	0	genome.wustl.edu	37	16	19559292	19559292	+	Silent	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	16	19559292	19559292	C	T	SNP	CCP110	ENST00000381396	human	ensembl	74_37	+1	known	silent	c.2856	p.N952	1.000	NULL	NULL	-	no_errors	CCP110	HGNC	ENSG00000103540	tier1	-	-	62	0	0.00	49	4	7.55
CCR4	0	genome.wustl.edu	37	3	32994925	32994925	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	3	32994925	32994925	C	T	SNP	CCR4	ENST00000330953	human	ensembl	74_37	+1	known	missense	c.11	p.T4M	0.679	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_CCR4,prints_GPCR_Rhodpsn,prints_Chemokine_rcpt,prints_Chemokine_CXCR4,prints_ATII_rcpt,prints_Duffy_chemokine_rcpt	-	no_errors	CCR4	HGNC	ENSG00000183813	tier1	rs200865776	-	49	0	0.00	43	4	8.51
CD226	0	genome.wustl.edu	37	18	67563060	67563060	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	18	67563060	67563060	C	T	SNP	CD226	ENST00000280200	human	ensembl	74_37	-1	known	missense	c.604	p.G202R	0.004	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	CD226	HGNC	ENSG00000150637	tier1	-	-	53	0	0.00	52	43	45.26
CDC27	0	genome.wustl.edu	37	17	45234372	45234372	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	17	45234372	45234372	C	T	SNP	CDC27	ENST00000531206	human	ensembl	74_37	-1	known	missense	c.749	p.G250E	1.000	NULL	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	CDC27	HGNC	ENSG00000004897				99	0	0.00	81	7	7.95
CDH10	0	genome.wustl.edu	37	5	24487316	24487316	+	RNA	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	5	24487316	24487316	C	T	SNP	CDH10	ENST00000502921	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CDH10	HGNC	ENSG00000040731	tier1	-	-	121	0	0.00	107	25	18.80
CENPE	0	genome.wustl.edu	37	4	104097163	104097163	+	Missense_Mutation	SNP	G	G	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	4	104097163	104097163	G	C	SNP	CENPE	ENST00000265148	human	ensembl	74_37	-1	known	missense	c.1433	p.T478R	0.048	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,superfamily_STAT_TF_coiled-coil,superfamily_Signal_recog_particl_SRP54_hlx,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	CENPE	HGNC	ENSG00000138778	tier1	-	-	48	0	0.00	24	15	38.46
CEP250	0	genome.wustl.edu	37	20	34061830	34061830	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	20	34061830	34061830	G	T	SNP	CEP250	ENST00000397527	human	ensembl	74_37	+1	known	missense	c.1524	p.E508D	0.995	NULL	superfamily_Prefoldin	-	no_errors	CEP250	HGNC	ENSG00000126001	tier1	-	-	44	0	0.00	40	4	9.09
CHGB	0	genome.wustl.edu	37	20	5897656	5897656	+	RNA	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	20	5897656	5897656	G	A	SNP	CHGB	ENST00000488832	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	CHGB	HGNC	ENSG00000089199	tier1	-	-	16	0	0.00	16	6	27.27
CHRM2	0	genome.wustl.edu	37	7	136555859	136555859	+	RNA	SNP	A	A	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	7	136555859	136555859	A	C	SNP	CHRM2	ENST00000480591	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CHRM2	HGNC	ENSG00000181072	tier1	-	-	76	0	0.00	23	30	56.60
CHRNB1	0	genome.wustl.edu	37	17	7350840	7350840	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	17	7350840	7350840	G	T	SNP	CHRNB1	ENST00000306071	human	ensembl	74_37	+1	known	missense	c.481	p.D161Y	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,prints_Neur_channel,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNB1	HGNC	ENSG00000170175				30	0	0.00	15	2	11.76
CLPS	0	genome.wustl.edu	37	6	35763554	35763554	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	6	35763554	35763554	G	A	SNP	CLPS	ENST00000259938	human	ensembl	74_37	-1	known	missense	c.161	p.A54V	1.000	pfam_Colipase_N,smart_Colipase,prints_Colipase	pfam_Colipase_C,pfam_Colipase_N,smart_Colipase,prints_Colipase	-	no_errors	CLPS	HGNC	ENSG00000137392	tier1	-	-	54	0	0.00	69	4	5.48
CNOT4	0	genome.wustl.edu	37	7	135082950	135082950	+	Missense_Mutation	SNP	T	T	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	7	135082950	135082950	T	C	SNP	CNOT4	ENST00000541284	human	ensembl	74_37	-1	known	missense	c.850	p.S284G	1.000	NULL	pfam_RRM_dom,smart_RRM_dom_euk,pfscan_Znf_RING,pfscan_RRM_dom	-	no_errors	CNOT4	HGNC	ENSG00000080802	tier1	-	-	108	0	0.00	72	4	5.26
COL10A1	0	genome.wustl.edu	37	6	116442374	116442374	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	6	116442374	116442374	C	T	SNP	COL10A1	ENST00000243222	human	ensembl	74_37	-1	known	missense	c.905	p.G302D	1.000	NULL	pfam_Collagen,pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	COL10A1	HGNC	ENSG00000123500				23	0	0.00	31	2	6.06
COL3A1	0	genome.wustl.edu	37	2	189870168	189870168	+	Silent	SNP	T	T	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	2	189870168	189870168	T	A	SNP	COL3A1	ENST00000304636	human	ensembl	74_37	+1	known	silent	c.3024	p.G1008	1.000	pfam_Collagen	pfam_Collagen,pfam_Fib_collagen_C,pfam_VWF_C,superfamily_Fibrinogen_a/b/g_C_dom,smart_VWF_C,smart_Fib_collagen_C,pfscan_VWF_C	-	no_errors	COL3A1	HGNC	ENSG00000168542	tier1	-	-	87	0	0.00	94	11	10.48
CPT1A	0	genome.wustl.edu	37	11	68530168	68530168	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	11	68530168	68530168	C	T	SNP	CPT1A	ENST00000265641	human	ensembl	74_37	-1	known	missense	c.1802	p.R601K	1.000	pfam_Carn_acyl_trans	pfam_Carn_acyl_trans	-	no_errors	CPT1A	HGNC	ENSG00000110090	tier1	-	-	38	0	0.00	46	4	8.00
CPZ	0	genome.wustl.edu	37	4	8605848	8605848	+	Silent	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	4	8605848	8605848	G	A	SNP	CPZ	ENST00000360986	human	ensembl	74_37	+1	known	silent	c.642	p.G214	0.685	pfam_Peptidase_M14,prints_Peptidase_M14	pfam_Peptidase_M14,pfam_Frizzled_dom,superfamily_Frizzled_dom,superfamily_CarboxyPept-like_regulatory,smart_Frizzled_dom,smart_Peptidase_M14,prints_Peptidase_M14,pfscan_Frizzled_dom	-	no_errors	CPZ	HGNC	ENSG00000109625	tier1	-	-	14	0	0.00	7	13	65.00
CREBBP	0	genome.wustl.edu	37	16	3824652	3824652	+	Nonsense_Mutation	SNP	A	A	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	16	3824652	3824652	A	T	SNP	CREBBP	ENST00000262367	human	ensembl	74_37	-1	known	nonsense	c.2201	p.L734*	1.000	NULL	pfam_Histone_H3-K56_AcTrfase_RTT109,pfam_Nuc_rcpt_coact_CREBbp,pfam_KIX_dom,pfam_DUF902_CREBbp,pfam_Znf_TAZ,pfam_Bromodomain,pfam_Znf_ZZ,superfamily_Bromodomain,superfamily_Znf_TAZ,superfamily_KIX_dom,superfamily_Nuc_rcpt_coact,superfamily_Znf_FYVE_PHD,smart_Znf_TAZ,smart_Bromodomain,smart_Znf_ZZ,pfscan_KIX_dom,pfscan_Znf_TAZ,pfscan_Znf_ZZ,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	CREBBP	HGNC	ENSG00000005339	tier1	-	-	73	0	0.00	57	4	6.56
CROCC	0	genome.wustl.edu	37	1	17280821	17280821	+	Missense_Mutation	SNP	G	G	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	1	17280821	17280821	G	C	SNP	CROCC	ENST00000375541	human	ensembl	74_37	+1	known	missense	c.3290	p.R1097P	1.000	NULL	superfamily_Prefoldin,superfamily_t-SNARE	-	no_errors	CROCC	HGNC	ENSG00000058453				49	0	0.00	49	5	9.26
CSMD1	0	genome.wustl.edu	37	8	2813198	2813198	+	Frame_Shift_Del	DEL	G	G	-			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	8	2813198	2813198	G	-	DEL	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	frame_shift_del	c.9910	p.H3304fs	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117	tier1			66	0	0.00	40	50	55.56
CSNK1A1L	0	genome.wustl.edu	37	13	37678734	37678734	+	Silent	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	13	37678734	37678734	C	T	SNP	CSNK1A1L	ENST00000379800	human	ensembl	74_37	-1	known	silent	c.660	p.P220	0.957	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CSNK1A1L	HGNC	ENSG00000180138	tier1	-	-	67	0	0.00	34	75	68.81
CXorf30	0	genome.wustl.edu	37	X	36385232	36385232	+	Missense_Mutation	SNP	A	A	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	X	36385232	36385232	A	G	SNP	CXorf30	ENST00000378657	human	ensembl	74_37	+1	known	missense	c.1513	p.S505G	1.000	NULL	NULL	-	no_errors	CXorf30	HGNC	ENSG00000205081	tier1	-	-	33	0	0.00	5	20	80.00
CYLD	0	genome.wustl.edu	37	16	50827509	50827509	+	Missense_Mutation	SNP	A	A	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	16	50827509	50827509	A	C	SNP	CYLD	ENST00000311559	human	ensembl	74_37	+1	known	missense	c.2403	p.E801D	0.838	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_CAP-Gly_domain,pfam_Peptidase_C19/C67,superfamily_CAP-Gly_domain,pfscan_CAP-Gly_domain,pfscan_Peptidase_C19/C67	-	no_errors	CYLD	HGNC	ENSG00000083799	tier1	-	-	77	0	0.00	65	24	26.97
CYP11B1	0	genome.wustl.edu	37	8	143958291	143958291	+	Silent	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	8	143958291	143958291	C	T	SNP	CYP11B1	ENST00000292427	human	ensembl	74_37	-1	known	silent	c.606	p.L202	0.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_mitochondrial,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B,prints_Cyt_P450	-	no_errors	CYP11B1	HGNC	ENSG00000160882				54	0	0.00	109	7	6.03
CYP2J2	0	genome.wustl.edu	37	1	60377901	60377901	+	Missense_Mutation	SNP	C	C	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	1	60377901	60377901	C	G	SNP	CYP2J2	ENST00000371204	human	ensembl	74_37	-1	known	missense	c.456	p.K152N	1.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP2J-like,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B,prints_Cyt_P450_E_grp-I_CYP2D-like	-	no_errors	CYP2J2	HGNC	ENSG00000134716	tier1	-	-	86	0	0.00	66	18	21.43
DDX60L	0	genome.wustl.edu	37	4	169342929	169342929	+	Silent	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	4	169342929	169342929	C	T	SNP	DDX60L	ENST00000260184	human	ensembl	74_37	-1	known	silent	c.2376	p.V792	0.856	pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DDX60L	HGNC	ENSG00000181381	tier1	-	-	68	0	0.00	63	4	5.97
DLG5	0	genome.wustl.edu	37	10	79556267	79556267	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	10	79556267	79556267	G	T	SNP	DLG5	ENST00000372391	human	ensembl	74_37	-1	known	missense	c.5250	p.D1750E	0.488	superfamily_P-loop_NTPase,smart_GK/Ca_channel_bsu	pfam_PDZ,pfam_DUF622,pfam_GK/Ca_channel_bsu,superfamily_P-loop_NTPase,superfamily_PDZ,superfamily_SH3_domain,superfamily_DEATH-like_dom,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_CARD,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	DLG5	HGNC	ENSG00000151208	tier1	-	-	42	0	0.00	41	4	8.89
DNAH8	0	genome.wustl.edu	37	6	38704935	38704935	+	Silent	SNP	A	A	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	6	38704935	38704935	A	G	SNP	DNAH8	ENST00000359357	human	ensembl	74_37	+1	known	silent	c.204	p.A68	0.991	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH8	HGNC	ENSG00000124721				35	0	0.00	45	3	6.25
DNAJC17	0	genome.wustl.edu	37	15	41071393	41071393	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	15	41071393	41071393	G	T	SNP	DNAJC17	ENST00000560645	human	ensembl	74_37	-1	known	missense	c.323	p.P108H	0.000	NULL	pfam_DnaJ_domain,superfamily_DnaJ_domain,smart_DnaJ_domain,prints_DnaJ_domain,pfscan_DnaJ_domain	-	no_errors	DNAJC17	HGNC	ENSG00000104129	tier1	-	-	74	0	0.00	54	4	6.90
DOCK10	0	genome.wustl.edu	37	2	225672674	225672674	+	Missense_Mutation	SNP	T	T	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	2	225672674	225672674	T	C	SNP	DOCK10	ENST00000258390	human	ensembl	74_37	-1	known	missense	c.3539	p.K1180R	1.000	superfamily_ARM-type_fold	pfam_DOCK_C,pfam_DOCK_C/D_N,pfam_Pleckstrin_homology,superfamily_ARM-type_fold,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	DOCK10	HGNC	ENSG00000135905	tier1	-	-	24	0	0.00	17	10	37.04
DPP9	0	genome.wustl.edu	37	19	4676632	4676632	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	19	4676632	4676632	C	T	SNP	DPP9	ENST00000262960	human	ensembl	74_37	-1	known	missense	c.2623	p.E875K	1.000	pfam_Peptidase_S9	pfam_Peptidase_S9B,pfam_Peptidase_S9,pfam_X-Pro-like_dom	-	no_errors	DPP9	HGNC	ENSG00000142002	tier1	-	-	103	0	0.00	9	87	90.62
DST	0	genome.wustl.edu	37	6	56490035	56490035	+	Silent	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	6	56490035	56490035	G	T	SNP	DST	ENST00000370754	human	ensembl	74_37	-1	known	silent	c.4651	p.R1551	1.000	superfamily_ABC1_TM_dom,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	DST	HGNC	ENSG00000151914				112	0	0.00	54	3	5.26
EBF4	0	genome.wustl.edu	37	20	2736210	2736210	+	RNA	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	20	2736210	2736210	C	T	SNP	EBF4	ENST00000477287	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	EBF4	HGNC	ENSG00000088881	tier1	-	-	14	0	0.00	14	23	62.16
EFCAB11	0	genome.wustl.edu	37	14	90420307	90420307	+	Silent	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	14	90420307	90420307	G	T	SNP	EFCAB11	ENST00000316738	human	ensembl	74_37	-1	known	silent	c.114	p.L38	1.000	smart_EF_hand_dom,pfscan_EF_hand_dom	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	EFCAB11	HGNC	ENSG00000140025	tier1	-	-	51	0	0.00	51	4	7.27
EIF4G3	0	genome.wustl.edu	37	1	21299503	21299504	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	1	21299503	21299504	TC	-	DEL	EIF4G3	ENST00000374937	human	ensembl	74_37	-1	known	frame_shift_del	c.436_435	p.K147fs	1.000:1.000	NULL	pfam_MIF4G-like_typ-3,pfam_Initiation_fac_eIF4g_MI,pfam_W2_domain,superfamily_ARM-type_fold,smart_MIF4G-like_typ-3,smart_Initiation_fac_eIF4g_MI,smart_W2_domain	-	no_errors	EIF4G3	HGNC	ENSG00000075151	tier1			108	0	0.00	59	31	34.44
EIF4G3	0	genome.wustl.edu	37	1	21299504	21299504	+	Silent	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	1	21299504	21299504	C	T	SNP	EIF4G3	ENST00000374937	human	ensembl	74_37	-1	known	silent	c.435	p.E145	1.000	NULL	pfam_MIF4G-like_typ-3,pfam_Initiation_fac_eIF4g_MI,pfam_W2_domain,superfamily_ARM-type_fold,smart_MIF4G-like_typ-3,smart_Initiation_fac_eIF4g_MI,smart_W2_domain	-	no_errors	EIF4G3	HGNC	ENSG00000075151				107	0	0.00	56	5	8.20
EIF5B	0	genome.wustl.edu	37	2	99977778	99977778	+	Silent	SNP	T	T	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	2	99977778	99977778	T	C	SNP	EIF5B	ENST00000289371	human	ensembl	74_37	+1	known	silent	c.414	p.D138	1.000	NULL	pfam_EF_GTP-bd_dom,pfam_TIF_IF2_dom3,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Transl_B-barrel,superfamily_TIF_IF2_dom3,prints_EF_GTP-bd_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	EIF5B	HGNC	ENSG00000158417	tier1	-	-	14	0	0.00	21	9	30.00
ENSG00000179755	0	genome.wustl.edu	37	16	34257063	34257063	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	16	34257063	34257063	G	A	SNP	ENSG00000179755	ENST00000319817	human	ensembl	74_37	+1	known	missense	c.307	p.A103T	0.066	NULL	NULL	-	no_errors	CTD-2144E22.5	Clone_based_vega_gene	ENSG00000179755	tier1	-	-	11	0	0.00	5	6	54.55
ENSG00000228302	0	genome.wustl.edu	37	10	12288997	12288997	+	RNA	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	10	12288997	12288997	C	T	SNP	ENSG00000228302	ENST00000421657	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-186N15.3	Clone_based_vega_gene	ENSG00000228302	tier1	rs111957661	-	22	0	0.00	18	3	14.29
ENSG00000228302	0	genome.wustl.edu	37	10	12289002	12289002	+	RNA	SNP	T	T	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	10	12289002	12289002	T	G	SNP	ENSG00000228302	ENST00000421657	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	RP11-186N15.3	Clone_based_vega_gene	ENSG00000228302	tier1	rs113024795	-	23	0	0.00	18	3	14.29
ENSG00000234978	0	genome.wustl.edu	37	1	142803274	142803274	+	RNA	DEL	A	A	-			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	1	142803274	142803274	A	0	DEL	ENSG00000234978	ENST00000423385	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	RP11-423O2.5	Clone_based_vega_gene	ENSG00000234978				109	0	0.00	68	7	9.33
ENSG00000234978	0	genome.wustl.edu	37	1	142803279	142803280	+	RNA	DEL	AA	AA	-			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	1	142803279	142803280	AA	0	DEL	ENSG00000234978	ENST00000423385	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006:0.005	-	-	-	no_errors	RP11-423O2.5	Clone_based_vega_gene	ENSG00000234978				114	0	0.00	71	7	8.97
ENSG00000252798	0	genome.wustl.edu	37	16	21598984	21598985	+	RNA	INS	-	-	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	16	21598984	21598985	-	T	INS	ENSG00000252798	ENST00000516989	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.242:0.246	-	-	-	no_errors	SCARNA6	RFAM	ENSG00000252798	tier1			10	0	0.00	11	3	21.43
ENSG00000264098	0	genome.wustl.edu	37	17	26729384	26729384	+	RNA	DEL	G	G	-			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	17	26729384	26729384	G	-	DEL	ENSG00000264098	ENST00000583956	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTD-2350C19.1	Clone_based_vega_gene	ENSG00000264098	tier1			32	0	0.00	23	2	8.00
ENSG00000267848	0	genome.wustl.edu	37	20	62585044	62585044	+	Frame_Shift_Del	DEL	A	A	-			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	20	62585044	62585044	A	-	DEL	ENSG00000267848	ENST00000595604	human	ensembl	74_37	+1	known	frame_shift_del	c.38	p.K16fs	0.024	NULL	NULL	-	no_errors	AL118506.1	Clone_based_ensembl_gene	ENSG00000267848	tier1			20	0	0.00	30	3	9.09
ENSG00000272231	0	genome.wustl.edu	37	12	74293679	74293680	+	RNA	DEL	TA	TA	-			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	TA	TA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	12	74293679	74293680	TA	0	DEL	ENSG00000272231	ENST00000606199	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.003:0.000	-	-	-	no_errors	AC136188.1	Clone_based_ensembl_gene	ENSG00000272231				11	0	0.00	13	6	31.58
ENTHD2	0	genome.wustl.edu	37	17	79205688	79205688	+	Silent	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	17	79205688	79205688	G	A	SNP	ENTHD2	ENST00000300714	human	ensembl	74_37	-1	known	silent	c.660	p.S220	1.000	NULL	pfam_Epsin_dom_N,superfamily_ENTH_VHS	-	no_errors	ENTHD2	HGNC	ENSG00000167302	tier1	-	-	67	0	0.00	60	4	6.25
ERVFRD-1	0	genome.wustl.edu	37	6	11104020	11104020	+	Silent	SNP	G	G	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	6	11104020	11104020	G	C	SNP	ERVFRD-1	ENST00000472091	human	ensembl	74_37	-1	known	silent	c.1524	p.T508	0.344	pfam_TLV/ENV_coat_polyprotein	pfam_TLV/ENV_coat_polyprotein	-	no_errors	ERVFRD-1	HGNC	ENSG00000244476	tier1	-	-	49	0	0.00	86	21	19.44
ESPL1	0	genome.wustl.edu	37	12	53666581	53666581	+	Silent	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	12	53666581	53666581	G	A	SNP	ESPL1	ENST00000257934	human	ensembl	74_37	+1	known	silent	c.1446	p.P482	0.902	NULL	pfam_Peptidase_C50,superfamily_DsrEFH-like	-	no_errors	ESPL1	HGNC	ENSG00000135476				51	0	0.00	61	4	6.15
ESYT1	0	genome.wustl.edu	37	12	56524830	56524830	+	Missense_Mutation	SNP	C	C	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	12	56524830	56524830	C	A	SNP	ESYT1	ENST00000267113	human	ensembl	74_37	+1	known	missense	c.574	p.R192S	1.000	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,prints_C2_dom,pfscan_C2_dom	-	no_errors	ESYT1	HGNC	ENSG00000139641	tier1	-	-	57	0	0.00	38	49	55.06
ESYT3	0	genome.wustl.edu	37	3	138191618	138191618	+	Silent	SNP	C	C	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	3	138191618	138191618	C	A	SNP	ESYT3	ENST00000389567	human	ensembl	74_37	+1	known	silent	c.2154	p.P718	0.003	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,prints_C2_dom,pfscan_C2_dom	-	no_errors	ESYT3	HGNC	ENSG00000158220	tier1	-	-	60	0	0.00	28	20	41.67
ETAA1	0	genome.wustl.edu	37	2	67631408	67631408	+	Missense_Mutation	SNP	C	C	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	2	67631408	67631408	C	G	SNP	ETAA1	ENST00000272342	human	ensembl	74_37	+1	known	missense	c.1594	p.Q532E	0.026	NULL	NULL	-	no_errors	ETAA1	HGNC	ENSG00000143971	tier1	-	-	27	0	0.00	21	17	44.74
EYS	0	genome.wustl.edu	37	6	66005740	66005741	+	RNA	INS	-	-	AA			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	6	66005740	66005741	-	AA	INS	EYS	ENST00000370615	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.032:0.122	-	-	-	no_errors	EYS	HGNC	ENSG00000188107	tier1			31	0	0.00	32	2	5.88
F2	0	genome.wustl.edu	37	11	46760903	46760904	+	Frame_Shift_Del	DEL	AT	AT	-			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	AT	AT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	11	46760903	46760904	AT	-	DEL	F2	ENST00000311907	human	ensembl	74_37	+1	known	frame_shift_del	c.1814_1815	p.H605fs	1.000:0.856	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pirsf_Prothrombin/thrombin,pfscan_Peptidase_S1,prints_Prothrombin/thrombin	pfam_Peptidase_S1,pfam_Kringle,pfam_Thrombin_light_chain,pfam_GLA_domain,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,superfamily_GLA_domain,smart_GLA_domain,smart_Kringle,smart_Peptidase_S1,pirsf_Prothrombin/thrombin,pfscan_GLA_domain,pfscan_Kringle,pfscan_Peptidase_S1,prints_Prothrombin/thrombin,prints_Peptidase_S1A,prints_GLA_domain	-	no_errors	F2	HGNC	ENSG00000180210	tier1			42	0	0.00	14	10	41.67
FAM45B	0	genome.wustl.edu	37	X	129629016	129629016	+	RNA	SNP	A	A	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	X	129629016	129629016	A	G	SNP	FAM45B	ENST00000592932	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	FAM45B	HGNC	ENSG00000221930	tier1	-	-	10	0	0.00	2	9	81.82
FAM73B	0	genome.wustl.edu	37	9	131825458	131825458	+	RNA	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	9	131825458	131825458	C	T	SNP	FAM73B	ENST00000494608	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	FAM73B	HGNC	ENSG00000148343	tier1	-	-	48	0	0.00	37	19	33.93
FANCD2	0	genome.wustl.edu	37	3	10114581	10114581	+	Frame_Shift_Del	DEL	G	G	-			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	3	10114581	10114581	G	-	DEL	FANCD2	ENST00000287647	human	ensembl	74_37	+1	known	frame_shift_del	c.2521	p.G841fs	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	FANCD2	HGNC	ENSG00000144554	tier1			77	0	0.00	37	2	5.13
FCHO1	0	genome.wustl.edu	37	19	17898537	17898537	+	Silent	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	19	17898537	17898537	C	T	SNP	FCHO1	ENST00000252771	human	ensembl	74_37	+1	known	silent	c.2529	p.S843	1.000	superfamily_Clathrin_mu_C	pfam_Muniscin_C-term_mu_dom,pfam_FCH_dom,superfamily_Clathrin_mu_C,smart_FCH_dom,pfscan_FCH_dom	-	no_errors	FCHO1	HGNC	ENSG00000130475				101	0	0.00	84	5	5.62
FCN2	0	genome.wustl.edu	37	9	137772729	137772729	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	9	137772729	137772729	G	A	SNP	FCN2	ENST00000291744	human	ensembl	74_37	+1	known	missense	c.62	p.G21D	0.001	NULL	pfam_Fibrinogen_a/b/g_C_dom,pfam_Collagen,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	-	no_errors	FCN2	HGNC	ENSG00000160339	tier1	-	-	57	0	0.00	46	4	8.00
FEN1	0	genome.wustl.edu	37	11	61563118	61563118	+	Silent	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	11	61563118	61563118	C	T	SNP	FEN1	ENST00000305885	human	ensembl	74_37	+1	known	silent	c.285	p.G95	0.000	pfam_XPG_DNA_repair_N,smart_XPG_DNA_repair_N,prints_XPG/Rad2	pfam_XPG_DNA_repair_N,pfam_XPG-I_dom,superfamily_5-3_exonuclease_C,smart_XPG_DNA_repair_N,smart_XPG-I_dom,smart_HhH2,prints_XPG/Rad2	-	no_errors	FEN1	HGNC	ENSG00000168496				21	0	0.00	32	2	5.88
FLG	0	genome.wustl.edu	37	1	152285666	152285666	+	Missense_Mutation	SNP	T	T	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	1	152285666	152285666	T	G	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	missense	c.1696	p.S566R	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631	tier1	-	-	186	0	0.00	175	59	25.21
FLJ22184	0	genome.wustl.edu	37	19	7937784	7937784	+	Frame_Shift_Del	DEL	T	T	-			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	19	7937784	7937784	T	-	DEL	FLJ22184	ENST00000539422	human	ensembl	74_37	-1	known	frame_shift_del	c.438	p.A147fs	0.938	NULL	NULL	-	no_errors	CTD-3193O13.9	Clone_based_vega_gene	ENSG00000183248	tier1			46	0	0.00	28	2	6.67
FMN2	0	genome.wustl.edu	37	1	240255585	240255585	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	1	240255585	240255585	G	A	SNP	FMN2	ENST00000319653	human	ensembl	74_37	+1	known	missense	c.176	p.G59E	0.941	NULL	pfam_FH2_Formin,pfam_Formin_homology_1,smart_FH2_Formin,pfscan_DEP_dom	-	no_errors	FMN2	HGNC	ENSG00000155816				34	0	0.00	69	5	6.76
FUT9	0	genome.wustl.edu	37	6	96651269	96651269	+	Missense_Mutation	SNP	A	A	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	6	96651269	96651269	A	T	SNP	FUT9	ENST00000302103	human	ensembl	74_37	+1	known	missense	c.238	p.T80S	0.997	pfam_Glyco_trans_10	pfam_Glyco_trans_10	-	no_errors	FUT9	HGNC	ENSG00000172461	tier1	-	-	50	0	0.00	33	18	35.29
GAMT	0	genome.wustl.edu	37	19	1399821	1399821	+	Silent	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	19	1399821	1399821	G	T	SNP	GAMT	ENST00000447102	human	ensembl	74_37	-1	known	silent	c.298	p.R100	0.998	NULL	NULL	-	no_errors	GAMT	HGNC	ENSG00000130005				48	0	0.00	40	3	6.98
GK2	0	genome.wustl.edu	37	4	80329142	80329142	+	Silent	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	4	80329142	80329142	C	T	SNP	GK2	ENST00000358842	human	ensembl	74_37	-1	known	silent	c.213	p.T71	0.808	pfam_Carb_kinase_FGGY_N,tigrfam_Glycerol_kin	pfam_Carb_kinase_FGGY_N,pfam_Carb_kinase_FGGY_C,tigrfam_Glycerol_kin	-	no_errors	GK2	HGNC	ENSG00000196475	tier1	-	-	64	0	0.00	29	18	38.30
GLB1L3	0	genome.wustl.edu	37	11	134179592	134179592	+	Missense_Mutation	SNP	C	C	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	11	134179592	134179592	C	G	SNP	GLB1L3	ENST00000431683	human	ensembl	74_37	+1	known	missense	c.1034	p.T345S	1.000	pfam_Glycoside_Hdrlase_35,superfamily_Glycoside_hydrolase_SF,prints_Glycoside_Hdrlase_35	pfam_Glycoside_Hdrlase_35,pfam_Glyco_hydro_42_N,superfamily_Glycoside_hydrolase_SF,superfamily_Galactose-bd-like,prints_Glycoside_Hdrlase_35	-	no_errors	GLB1L3	HGNC	ENSG00000166105	tier1	-	-	60	0	0.00	31	53	63.10
GLE1	0	genome.wustl.edu	37	9	131295828	131295828	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	9	131295828	131295828	G	A	SNP	GLE1	ENST00000309971	human	ensembl	74_37	+1	known	missense	c.1349	p.S450N	0.997	pfam_GLE1	pfam_GLE1	-	no_errors	GLE1	HGNC	ENSG00000119392				43	0	0.00	33	2	5.56
GPATCH8	0	genome.wustl.edu	37	17	42483347	42483347	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	17	42483347	42483347	G	T	SNP	GPATCH8	ENST00000591680	human	ensembl	74_37	-1	known	missense	c.565	p.Q189K	1.000	NULL	pfam_G_patch_dom,pfam_Znf_C2H2_jaz,smart_G_patch_dom,pfscan_Znf_C2H2,pfscan_G_patch_dom	-	no_errors	GPATCH8	HGNC	ENSG00000186566				39	0	0.00	38	2	5.00
GPR179	0	genome.wustl.edu	37	17	36484880	36484880	+	Silent	SNP	T	T	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	17	36484880	36484880	T	C	SNP	GPR179	ENST00000342292	human	ensembl	74_37	-1	known	silent	c.4572	p.A1524	0.000	NULL	pfam_GPCR_3_C,superfamily_Growth_fac_rcpt_N_dom,pfscan_GPCR_3_C	-	no_errors	GPR179	HGNC	ENSG00000188888	tier1	-	-	57	0	0.00	48	4	7.69
GPR56	0	genome.wustl.edu	37	16	57691341	57691341	+	Silent	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	16	57691341	57691341	C	T	SNP	GPR56	ENST00000379696	human	ensembl	74_37	+1	known	silent	c.1224	p.Y408	1.000	pfam_GPCR_2_secretin-like,prints_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_GPCR_2_secretin-like,pfam_GPS_dom,smart_GPS_dom,prints_GPCR_2_orphan_rcpt_GPR56,prints_GPCR_2_secretin-like,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR56	HGNC	ENSG00000205336	tier1	-	-	62	0	0.00	38	28	42.42
GPSM2	0	genome.wustl.edu	37	1	109444432	109444432	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	1	109444432	109444432	G	A	SNP	GPSM2	ENST00000264126	human	ensembl	74_37	+1	known	missense	c.818	p.R273Q	1.000	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	pfam_GoLoco_motif,pfam_TPR_1,pfam_TPR-4,smart_TPR_repeat,smart_GoLoco_motif,pfscan_GoLoco_motif,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	GPSM2	HGNC	ENSG00000121957				36	0	0.00	33	2	5.71
GPT2	0	genome.wustl.edu	37	16	46956203	46956203	+	Frame_Shift_Del	DEL	A	A	-			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	16	46956203	46956203	A	-	DEL	GPT2	ENST00000340124	human	ensembl	74_37	+1	known	frame_shift_del	c.1087	p.I363fs	1.000	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase	-	no_errors	GPT2	HGNC	ENSG00000166123	tier1			50	0	0.00	51	25	32.89
GRK4	0	genome.wustl.edu	37	4	3030968	3030968	+	Silent	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	4	3030968	3030968	C	T	SNP	GRK4	ENST00000398052	human	ensembl	74_37	+1	known	silent	c.1101	p.P367	0.995	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_RGS_dom,superfamily_Kinase-like_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Regulat_G_prot_signal_superfam,pfscan_Prot_kinase_dom,prints_GPCR_kinase	-	no_errors	GRK4	HGNC	ENSG00000125388	tier1	rs147908042	-	88	0	0.00	11	64	85.33
GSAP	0	genome.wustl.edu	37	7	77011915	77011915	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	7	77011915	77011915	G	T	SNP	GSAP	ENST00000257626	human	ensembl	74_37	-1	known	missense	c.502	p.L168M	1.000	NULL	NULL	-	no_errors	GSAP	HGNC	ENSG00000186088				54	0	0.00	67	4	5.63
HAS1	0	genome.wustl.edu	37	19	52222714	52222714	+	Silent	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	19	52222714	52222714	G	A	SNP	HAS1	ENST00000601714	human	ensembl	74_37	-1	known	silent	c.468	p.R156	0.993	NULL	pfam_Chitin_synth_fng,pfam_Glyco_trans_2	-	no_errors	HAS1	HGNC	ENSG00000105509				71	0	0.00	55	4	6.78
HEATR5A	0	genome.wustl.edu	37	14	31844022	31844022	+	Missense_Mutation	SNP	C	C	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	14	31844022	31844022	C	A	SNP	HEATR5A	ENST00000389961	human	ensembl	74_37	-1	known	missense	c.1843	p.A615S	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	HEATR5A	HGNC	ENSG00000129493				62	0	0.00	31	2	6.06
HEATR6	0	genome.wustl.edu	37	17	58145047	58145047	+	Missense_Mutation	SNP	C	C	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	17	58145047	58145047	C	A	SNP	HEATR6	ENST00000184956	human	ensembl	74_37	-1	known	missense	c.986	p.G329V	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	HEATR6	HGNC	ENSG00000068097				34	0	0.00	41	3	6.82
HIBCH	0	genome.wustl.edu	37	2	191077701	191077701	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	2	191077701	191077701	C	T	SNP	HIBCH	ENST00000359678	human	ensembl	74_37	-1	known	missense	c.992	p.R331Q	0.889	NULL	pfam_Crotonase_core_superfam	-	no_errors	HIBCH	HGNC	ENSG00000198130	tier1	-	-	31	0	0.00	14	21	60.00
HIF1A	0	genome.wustl.edu	37	14	62193491	62193491	+	Silent	SNP	A	A	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	14	62193491	62193491	A	G	SNP	HIF1A	ENST00000539097	human	ensembl	74_37	+1	known	silent	c.597	p.L199	0.971	superfamily_PAS	pfam_PAS_fold_3,pfam_HIF-1_TAD_C,pfam_HIF_alpha_subunit,pfam_PAS_fold,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,smart_PAC,prints_HIF-1_alpha,pfscan_PAS,pfscan_bHLH_dom,tigrfam_PAS	-	no_errors	HIF1A	HGNC	ENSG00000100644				43	0	0.00	31	2	6.06
HIST1H4E	0	genome.wustl.edu	37	6	26205150	26205150	+	Missense_Mutation	SNP	G	G	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	6	26205150	26205150	G	C	SNP	HIST1H4E	ENST00000360441	human	ensembl	74_37	+1	known	missense	c.278	p.R93T	1.000	pfam_Histone_core_D,superfamily_Histone-fold,smart_TAF_TATA-bd,prints_Histone_H4	pfam_Histone_core_D,pfam_TAF_TATA-bd,superfamily_Histone-fold,smart_Histone_H4,smart_TAF_TATA-bd,prints_Histone_H4	-	no_errors	HIST1H4E	HGNC	ENSG00000198518	tier1	-	-	69	0	0.00	73	20	21.51
HRG	0	genome.wustl.edu	37	3	186387733	186387733	+	Missense_Mutation	SNP	G	G	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	3	186387733	186387733	G	C	SNP	HRG	ENST00000232003	human	ensembl	74_37	+1	known	missense	c.307	p.G103R	1.000	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	-	no_errors	HRG	HGNC	ENSG00000113905	tier1	-	-	52	0	0.00	21	16	43.24
HTRA3	0	genome.wustl.edu	37	4	8271836	8271836	+	Silent	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	4	8271836	8271836	C	T	SNP	HTRA3	ENST00000307358	human	ensembl	74_37	+1	known	silent	c.141	p.L47	1.000	smart_IGFBP-like	pfam_Peptidase_S1,pfam_Kazal_dom,pfam_PDZ,superfamily_Trypsin-like_Pept_dom,superfamily_PDZ,smart_IGFBP-like,smart_Kazal_dom,smart_PDZ,pfscan_PDZ,prints_Peptidase_S1C	-	no_errors	HTRA3	HGNC	ENSG00000170801	tier1	-	-	8	0	0.00	0	5	100.00
ICA1	0	genome.wustl.edu	37	7	8196568	8196585	+	In_Frame_Del	DEL	AAAAAAAAAAAAAAAAAG	AAAAAAAAAAAAAAAAAG	-			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	AAAAAAAAAAAAAAAAAG	AAAAAAAAAAAAAAAAAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	7	8196568	8196585	AAAAAAAAAAAAAAAAAG	0	DEL	ICA1	ENST00000407906	human	ensembl	74_37	-1	putative	in_frame_del	c.982_965	p.SFFFFF322in_frame_del	0.013:0.018:0.022:0.026:0.029:0.033:0.021:0.016:0.011:0.005:0.002:0.000:0.000:0.000:0.001:0.001:0.001:0.001	NULL	pfam_AH_dom,pfscan_AH_dom	-	no_errors	ICA1	HGNC	ENSG00000003147				34	0	0.00	31	9	22.50
ICAM5	0	genome.wustl.edu	37	19	10404937	10404937	+	Missense_Mutation	SNP	T	T	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	19	10404937	10404937	T	C	SNP	ICAM5	ENST00000221980	human	ensembl	74_37	+1	known	missense	c.1933	p.C645R	0.997	smart_Ig_sub	pfam_Ig_I-set,pfam_ICAM_N,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom,prints_ICAM_VCAM_N,prints_ICAM	-	no_errors	ICAM5	HGNC	ENSG00000105376	tier1	-	-	66	0	0.00	59	4	6.35
IFNA2	0	genome.wustl.edu	37	9	21384796	21384796	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	9	21384796	21384796	G	A	SNP	IFNA2	ENST00000380206	human	ensembl	74_37	-1	known	missense	c.533	p.T178I	0.000	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta,prints_Interferon_alpha/beta/delta	-	no_errors	IFNA2	HGNC	ENSG00000188379				115	0	0.00	55	4	6.67
IFT88	0	genome.wustl.edu	37	13	21157104	21157104	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	13	21157104	21157104	G	T	SNP	IFT88	ENST00000319980	human	ensembl	74_37	+1	known	missense	c.126	p.E42D	0.994	NULL	pfam_TPR_1,pfam_TPR_2,pfam_OMP_IML2_mit/TPR_39,smart_TPR_repeat,smart_Sel1-like,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	IFT88	HGNC	ENSG00000032742	tier1	-	-	50	0	0.00	56	4	6.67
IGHV1OR21-1	0	genome.wustl.edu	37	21	10862950	10862950	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	21	10862950	10862950	G	T	SNP	IGHV1OR21-1	ENST00000559480	human	ensembl	74_37	+1	known	missense	c.246	p.K82N	0.003	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	IGHV1OR21-1	HGNC	ENSG00000169861	tier1	-	-	235	0	0.00	111	120	51.95
IGSF3	0	genome.wustl.edu	37	1	117122285	117122286	+	In_Frame_Ins	INS	-	-	TCC			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	1	117122285	117122286	-	TCC	INS	IGSF3	ENST00000318837	human	ensembl	74_37	-1	known	in_frame_ins	c.3123_3122	p.1041in_frame_insE	0.040:0.030	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	IGSF3	HGNC	ENSG00000143061	tier1			18	0	0.00	19	9	32.14
IL17RE	0	genome.wustl.edu	37	3	9948460	9948460	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	3	9948460	9948460	C	T	SNP	IL17RE	ENST00000421412	human	ensembl	74_37	+1	known	missense	c.536	p.S179F	0.001	NULL	pfam_SEFIR	-	no_errors	IL17RE	HGNC	ENSG00000163701				47	0	0.00	38	2	5.00
IPP	0	genome.wustl.edu	37	1	46165855	46165855	+	Nonsense_Mutation	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	1	46165855	46165855	C	T	SNP	IPP	ENST00000396478	human	ensembl	74_37	-1	known	nonsense	c.1538	p.W513*	1.000	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	IPP	HGNC	ENSG00000197429	tier1	-	-	29	0	0.00	13	18	58.06
ITGA8	0	genome.wustl.edu	37	10	15760810	15760810	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	10	15760810	15760810	C	T	SNP	ITGA8	ENST00000378076	human	ensembl	74_37	-1	known	missense	c.298	p.A100T	0.051	smart_Int_alpha_beta-p	pfam_Integrin_alpha-2,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA8	HGNC	ENSG00000077943	tier1	-	-	46	0	0.00	50	19	27.54
JAKMIP2	0	genome.wustl.edu	37	5	147012329	147012329	+	Missense_Mutation	SNP	C	C	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	5	147012329	147012329	C	G	SNP	JAKMIP2	ENST00000265272	human	ensembl	74_37	-1	known	missense	c.1690	p.E564Q	1.000	NULL	NULL	-	no_errors	JAKMIP2	HGNC	ENSG00000176049	tier1	-	-	83	0	0.00	48	28	36.84
KATNA1	0	genome.wustl.edu	37	6	149919207	149919207	+	RNA	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	6	149919207	149919207	G	T	SNP	KATNA1	ENST00000481905	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	KATNA1	HGNC	ENSG00000186625	tier1	-	-	22	0	0.00	9	16	64.00
KIAA1211	0	genome.wustl.edu	37	4	57180699	57180699	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	4	57180699	57180699	G	A	SNP	KIAA1211	ENST00000504228	human	ensembl	74_37	+1	known	missense	c.1031	p.R344Q	0.015	NULL	NULL	-	no_errors	KIAA1211	HGNC	ENSG00000109265	tier1	-	-	30	0	0.00	15	11	42.31
KIAA1244	0	genome.wustl.edu	37	6	138657565	138657565	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	6	138657565	138657565	G	A	SNP	KIAA1244	ENST00000251691	human	ensembl	74_37	+1	known	missense	c.6476	p.R2159H	1.000	NULL	pfam_DUF1981_Sec7_assoc,superfamily_ARM-type_fold,superfamily_Sec7_dom,smart_Sec7_dom	-	no_errors	KIAA1244	HGNC	ENSG00000112379	tier1	rs111914596	-	50	0	0.00	23	27	54.00
KIAA1841	0	genome.wustl.edu	37	2	61315638	61315639	+	RNA	INS	-	-	TA			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	2	61315638	61315639	-	TA	INS	KIAA1841	ENST00000482513	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.001	-	-	-	no_errors	KIAA1841	HGNC	ENSG00000162929	tier1			29	0	0.00	37	5	11.90
KLB	0	genome.wustl.edu	37	4	39439551	39439551	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	4	39439551	39439551	C	T	SNP	KLB	ENST00000257408	human	ensembl	74_37	+1	known	missense	c.1541	p.T514M	0.988	NULL	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_1	-	no_errors	KLB	HGNC	ENSG00000134962				63	0	0.00	56	3	5.08
KLHDC3	0	genome.wustl.edu	37	6	42986163	42986163	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	6	42986163	42986163	G	A	SNP	KLHDC3	ENST00000326974	human	ensembl	74_37	+1	known	missense	c.602	p.R201H	1.000	pfam_Kelch_2,pfam_Kelch_1	pfam_Kelch_2,pfam_Kelch_1	-	no_errors	KLHDC3	HGNC	ENSG00000124702				39	0	0.00	50	3	5.56
KPNA1	0	genome.wustl.edu	37	3	122152584	122152584	+	Missense_Mutation	SNP	C	C	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	3	122152584	122152584	C	A	SNP	KPNA1	ENST00000344337	human	ensembl	74_37	-1	known	missense	c.1174	p.A392S	1.000	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo	pfam_Armadillo,pfam_Importin-a_IBB,pfam_HEAT,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo,pfscan_Importin-a_IBB	-	no_errors	KPNA1	HGNC	ENSG00000114030	tier1	-	-	87	0	0.00	32	19	37.25
KRT23	0	genome.wustl.edu	37	17	39084536	39084536	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	17	39084536	39084536	C	T	SNP	KRT23	ENST00000209718	human	ensembl	74_37	-1	known	missense	c.875	p.R292H	0.990	pfam_IF	pfam_IF,prints_Keratin_I	-	no_errors	KRT23	HGNC	ENSG00000108244				57	0	0.00	55	3	5.17
LARS2	0	genome.wustl.edu	37	3	45530292	45530292	+	Silent	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	3	45530292	45530292	C	T	SNP	LARS2	ENST00000265537	human	ensembl	74_37	+1	known	silent	c.1227	p.S409	0.015	superfamily_Val/Leu/Ile-tRNA-synth_edit,tigrfam_Leu-tRNA-ligase_bac/mito	pfam_aa-tRNA-synth_Ia,pfam_Methionyl/Leucyl_tRNA_Synth,pfam_V/L/I-tRNA-synth_anticodon-bd,superfamily_tRNAsynth_1a_anticodon-bd,superfamily_Val/Leu/Ile-tRNA-synth_edit,prints_Leu-tRNA-ligase_bac/mito,tigrfam_Leu-tRNA-ligase_bac/mito	-	no_errors	LARS2	HGNC	ENSG00000011376	tier1	-	-	81	0	0.00	48	4	7.69
LONP2	0	genome.wustl.edu	37	16	48337147	48337147	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	16	48337147	48337147	G	A	SNP	LONP2	ENST00000285737	human	ensembl	74_37	+1	known	missense	c.1726	p.A576T	1.000	tigrfam_Lon_bac/euk-typ	pfam_Pept_S16_C,pfam_Pept_S16_N,pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_P-loop_NTPase,superfamily_PUA-like_domain,smart_Pept_S16_N,smart_AAA+_ATPase,tigrfam_Lon_bac/euk-typ	-	no_errors	LONP2	HGNC	ENSG00000102910	tier1	-	-	129	0	0.00	103	48	31.79
LPA	0	genome.wustl.edu	37	6	160953585	160953585	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	6	160953585	160953585	G	A	SNP	LPA	ENST00000316300	human	ensembl	74_37	-1	known	missense	c.5939	p.A1980V	0.023	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Kringle,pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_Kringle,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Kringle,pfscan_Peptidase_S1	-	no_errors	LPA	HGNC	ENSG00000198670	tier1	-	-	54	0	0.00	69	5	6.76
LRRN1	0	genome.wustl.edu	37	3	3886722	3886722	+	Nonsense_Mutation	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	3	3886722	3886722	G	T	SNP	LRRN1	ENST00000319331	human	ensembl	74_37	+1	known	nonsense	c.397	p.E133*	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRRN1	HGNC	ENSG00000175928	tier1	-	-	48	0	0.00	32	4	11.11
LYN	0	genome.wustl.edu	37	8	56879419	56879419	+	Silent	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	8	56879419	56879419	G	A	SNP	LYN	ENST00000519728	human	ensembl	74_37	+1	known	silent	c.936	p.E312	0.998	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_SH3_domain	-	no_errors	LYN	HGNC	ENSG00000254087	tier1	-	-	34	0	0.00	57	8	12.31
MAGEH1	0	genome.wustl.edu	37	X	55479335	55479335	+	Silent	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	X	55479335	55479335	C	T	SNP	MAGEH1	ENST00000342972	human	ensembl	74_37	+1	known	silent	c.528	p.V176	0.988	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEH1	HGNC	ENSG00000187601	tier1	-	-	25	0	0.00	25	18	41.86
MAP10	0	genome.wustl.edu	37	1	232942210	232942211	+	Frame_Shift_Ins	INS	-	-	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	1	232942210	232942211	-	A	INS	MAP10	ENST00000418460	human	ensembl	74_37	+1	known	frame_shift_ins	c.1441_1442	p.R484fs	0.013:0.010	NULL	NULL	-	no_errors	MAP10	HGNC	ENSG00000212916	tier1			44	0	0.00	28	2	6.67
MAP1S	0	genome.wustl.edu	37	19	17838519	17838519	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	19	17838519	17838519	G	T	SNP	MAP1S	ENST00000324096	human	ensembl	74_37	+1	known	missense	c.2326	p.G776W	0.004	NULL	NULL	-	no_errors	MAP1S	HGNC	ENSG00000130479				9	0	0.00	3	3	50.00
MAP3K19	0	genome.wustl.edu	37	2	135756433	135756433	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	2	135756433	135756433	C	T	SNP	MAP3K19	ENST00000375845	human	ensembl	74_37	-1	known	missense	c.449	p.R150K	0.006	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K19	HGNC	ENSG00000176601				66	0	0.00	68	4	5.56
MARK3	0	genome.wustl.edu	37	14	103931996	103931996	+	Missense_Mutation	SNP	A	A	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	14	103931996	103931996	A	T	SNP	MARK3	ENST00000429436	human	ensembl	74_37	+1	known	missense	c.643	p.S215C	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_KA1_dom,superfamily_Kinase-like_dom,superfamily_KA1/Ssp2_C,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MARK3	HGNC	ENSG00000075413	tier1	-	-	53	0	0.00	43	34	44.16
MARS	0	genome.wustl.edu	37	12	57905572	57905572	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	12	57905572	57905572	G	T	SNP	MARS	ENST00000262027	human	ensembl	74_37	+1	known	missense	c.1460	p.R487L	1.000	pfam_Methionyl/Leucyl_tRNA_Synth,tigrfam_Met-tRNA_synth	pfam_Methionyl/Leucyl_tRNA_Synth,pfam_WHEP-TRS,superfamily_tRNAsynth_1a_anticodon-bd,superfamily_Glutathione-S-Trfase_C-like,superfamily_S15_NS1_RNA-bd,superfamily_Thioredoxin-like_fold,pfscan_WHEP-TRS,prints_Met-tRNA_synth,tigrfam_Met-tRNA_synth	-	no_errors	MARS	HGNC	ENSG00000166986	tier1	-	-	57	0	0.00	63	4	5.97
MCM9	0	genome.wustl.edu	37	6	119137014	119137014	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	6	119137014	119137014	G	A	SNP	MCM9	ENST00000316316	human	ensembl	74_37	-1	known	missense	c.2405	p.S802L	0.154	NULL	pfam_MCM_DNA-dep_ATPase,pfam_Mg_chelatse_chII,pfam_ATPase_dyneun-rel_AAA,superfamily_NA-bd_OB-fold,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,smart_AAA+_ATPase,prints_MCM_DNA-dep_ATPase,pfscan_MCM_DNA-dep_ATPase	-	no_errors	MCM9	HGNC	ENSG00000111877	tier1	-	-	83	0	0.00	95	24	20.17
MEF2C	0	genome.wustl.edu	37	5	88018583	88018583	+	Missense_Mutation	SNP	A	A	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	5	88018583	88018583	A	T	SNP	MEF2C	ENST00000506554	human	ensembl	74_37	-1	putative	missense	c.1187	p.L396Q	1.000	NULL	pfam_TF_MADSbox,pfam_HJURP_C,superfamily_TF_MADSbox,smart_TF_MADSbox,prints_TF_MADSbox,pfscan_TF_MADSbox	-	no_errors	MEF2C	HGNC	ENSG00000081189	tier1	-	-	47	0	0.00	31	21	40.38
MEGF10	0	genome.wustl.edu	37	5	126738367	126738367	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	5	126738367	126738367	G	T	SNP	MEGF10	ENST00000274473	human	ensembl	74_37	+1	known	missense	c.910	p.G304W	1.000	pfam_EGF_laminin,pfam_EGF_extracell,smart_EG-like_dom,smart_EGF_laminin,pfscan_EG-like_dom	pfam_EGF_laminin,pfam_EGF_extracell,superfamily_Proteinase_amylase_inhib_dom,smart_EG-like_dom,smart_EGF_laminin,pfscan_EG-like_dom,pfscan_EMI_domain	-	no_errors	MEGF10	HGNC	ENSG00000145794	tier1	-	-	76	0	0.00	49	4	7.55
MIPOL1	0	genome.wustl.edu	37	14	37992724	37992724	+	Missense_Mutation	SNP	G	G	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	14	37992724	37992724	G	C	SNP	MIPOL1	ENST00000545536	human	ensembl	74_37	+1	known	missense	c.1216	p.E406Q	0.000	NULL	NULL	-	no_errors	MIPOL1	HGNC	ENSG00000151338	tier1	-	-	68	0	0.00	52	38	42.22
MIR137HG	0	genome.wustl.edu	37	1	98510870	98510870	+	RNA	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	1	98510870	98510870	G	A	SNP	MIR137HG	ENST00000413670	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.764	-	-	-	no_errors	MIR137HG	HGNC	ENSG00000225206	tier1	-	-	27	0	0.00	11	31	73.81
MIR708	0	genome.wustl.edu	37	11	79113144	79113144	+	RNA	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	11	79113144	79113144	G	A	SNP	MIR708	ENST00000390708	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MIR708	HGNC	ENSG00000211997	tier1	-	-	58	0	0.00	74	18	19.57
MME	0	genome.wustl.edu	37	3	154802112	154802112	+	Silent	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	3	154802112	154802112	C	T	SNP	MME	ENST00000360490	human	ensembl	74_37	+1	known	silent	c.156	p.Y52	0.761	NULL	pfam_Peptidase_M13_N,pfam_Peptidase_M13_C,prints_Peptidase_M13_C	-	no_errors	MME	HGNC	ENSG00000196549				29	0	0.00	23	2	8.00
MMP14	0	genome.wustl.edu	37	14	23306080	23306080	+	Silent	SNP	C	C	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	14	23306080	23306080	C	A	SNP	MMP14	ENST00000311852	human	ensembl	74_37	+1	known	silent	c.54	p.L18	1.000	pirsf_Pept_M10A_Metazoans	pirsf_Pept_M10A_Metazoans,pfam_Hemopexin-like_repeat,pfam_Pept_M10_metallopeptidase,pfam_Pept_M10A_metallopeptidase_C,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,prints_Pept_M10A	-	no_errors	MMP14	HGNC	ENSG00000157227	tier1	-	-	235	0	0.00	80	82	50.62
MSH3	0	genome.wustl.edu	37	5	79952246	79952246	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	5	79952246	79952246	G	T	SNP	MSH3	ENST00000265081	human	ensembl	74_37	+1	known	missense	c.254	p.R85I	0.002	NULL	pfam_DNA_mismatch_repair_MutS_C,pfam_DNA_mismatch_repair_MutS_core,pfam_DNA_mmatch_repair_MutS_con_dom,pfam_DNA_mismatch_repair_MutS-lik_N,pfam_DNA_mismatch_repair_MutS_clamp,superfamily_DNA_mismatch_repair_MutS_core,superfamily_P-loop_NTPase,superfamily_DNA_mismatch_repair_MutS_N,superfamily_DNA_mmatch_repair_MutS_con_dom,smart_DNA_mismatch_repair_MutS_core,smart_DNA_mismatch_repair_MutS_C	-	no_errors	MSH3	HGNC	ENSG00000113318	tier1	-	-	41	0	0.00	32	4	11.11
MT-RNR2	0	genome.wustl.edu	37	MT	2141	2142	+	RNA	INS	-	-	AG			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	MT	2141	2142	0	AG	INS	MT-RNR2	ENST00000387347	human	ensembl	74_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-RNR2	HGNC	ENSG00000210082				164	0	0.00	165	15	8.33
MTMR3	0	genome.wustl.edu	37	22	30374971	30374971	+	Missense_Mutation	SNP	G	G	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	22	30374971	30374971	G	C	SNP	MTMR3	ENST00000401950	human	ensembl	74_37	+1	known	missense	c.140	p.R47P	1.000	NULL	pfam_Myotubularin-like_Pase_dom,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Tyr_Pase_cat,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	-	no_errors	MTMR3	HGNC	ENSG00000100330	tier1	-	-	73	0	0.00	118	15	11.28
MTNR1B	0	genome.wustl.edu	37	11	92703096	92703096	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	11	92703096	92703096	C	T	SNP	MTNR1B	ENST00000257068	human	ensembl	74_37	+1	known	missense	c.205	p.R69C	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_NPY_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Melatonin_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt,prints_Mel_1A_rcpt	-	no_errors	MTNR1B	HGNC	ENSG00000134640	tier1	-	-	63	0	0.00	56	17	23.29
MUC6	0	genome.wustl.edu	37	11	1016373	1016376	+	Frame_Shift_Del	DEL	GAAG	GAAG	-			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	GAAG	GAAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	11	1016373	1016376	GAAG	-	DEL	MUC6	ENST00000421673	human	ensembl	74_37	-1	known	frame_shift_del	c.6428_6425	p.S2142fs	0.001:0.000:0.000:0.002	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	MUC6	HGNC	ENSG00000184956	tier1			79	0	0.00	26	6	18.75
MUC6	0	genome.wustl.edu	37	11	1031203	1031203	+	Silent	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	11	1031203	1031203	G	A	SNP	MUC6	ENST00000421673	human	ensembl	74_37	-1	known	silent	c.540	p.D180	0.937	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	MUC6	HGNC	ENSG00000184956	tier1	-	-	64	0	0.00	23	16	41.03
MYADML	0	genome.wustl.edu	37	2	33953082	33953082	+	RNA	SNP	C	C	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	2	33953082	33953082	C	G	SNP	MYADML	ENST00000474610	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.049	-	-	-	no_errors	MYADML	HGNC	ENSG00000239649				21	0	0.00	23	4	14.81
MYH15	0	genome.wustl.edu	37	3	108205371	108205371	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	3	108205371	108205371	G	T	SNP	MYH15	ENST00000273353	human	ensembl	74_37	-1	known	missense	c.934	p.L312M	0.791	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_Lambda_DNA-bd_dom,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	-	no_errors	MYH15	HGNC	ENSG00000144821				51	0	0.00	37	2	5.13
MYRF	0	genome.wustl.edu	37	11	61541625	61541625	+	Silent	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	11	61541625	61541625	C	T	SNP	MYRF	ENST00000278836	human	ensembl	74_37	+1	known	silent	c.1302	p.H434	0.953	pfam_NDT80_DNA-bd_dom,superfamily_p53-like_TF_DNA-bd	pfam_NDT80_DNA-bd_dom,superfamily_p53-like_TF_DNA-bd	-	no_errors	MYRF	HGNC	ENSG00000124920	tier1	-	-	31	0	0.00	27	9	25.00
NAV3	0	genome.wustl.edu	37	12	78400991	78400991	+	Missense_Mutation	SNP	A	A	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	12	78400991	78400991	A	C	SNP	NAV3	ENST00000397909	human	ensembl	74_37	+1	known	missense	c.1673	p.K558T	1.000	NULL	pfam_CH-domain,pfam_ATPase_AAA_core,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV3	HGNC	ENSG00000067798	tier1	-	-	37	0	0.00	6	41	87.23
NETO1	0	genome.wustl.edu	37	18	70532913	70532913	+	RNA	SNP	T	T	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	18	70532913	70532913	T	G	SNP	NETO1	ENST00000580049	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NETO1	HGNC	ENSG00000166342	tier1	-	-	21	0	0.00	22	11	33.33
NFASC	0	genome.wustl.edu	37	1	204971813	204971813	+	Missense_Mutation	SNP	C	C	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	1	204971813	204971813	C	G	SNP	NFASC	ENST00000367172	human	ensembl	74_37	+1	known	missense	c.3547	p.R1183G	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	NFASC	HGNC	ENSG00000163531	tier1	-	-	38	0	0.00	46	22	32.35
NFATC2	0	genome.wustl.edu	37	20	50140171	50140171	+	Silent	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	20	50140171	50140171	C	T	SNP	NFATC2	ENST00000396009	human	ensembl	74_37	-1	known	silent	c.609	p.P203	0.148	NULL	pfam_RHD,pfam_IPT,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NFAT	-	no_errors	NFATC2	HGNC	ENSG00000101096	tier1	-	-	92	0	0.00	62	60	48.39
NOD2	0	genome.wustl.edu	37	16	50745399	50745399	+	Frame_Shift_Del	DEL	C	C	-			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	16	50745399	50745399	C	-	DEL	NOD2	ENST00000300589	human	ensembl	74_37	+1	known	frame_shift_del	c.1577	p.P528fs	0.928	NULL	pfam_CARD,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_CARD	-	no_errors	NOD2	HGNC	ENSG00000167207	tier1			19	0	0.00	29	2	6.45
NOP14	0	genome.wustl.edu	37	4	2956223	2956223	+	Silent	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	4	2956223	2956223	G	A	SNP	NOP14	ENST00000416614	human	ensembl	74_37	-1	known	silent	c.540	p.G180	0.503	pfam_Nop14	pfam_Nop14	-	no_errors	NOP14	HGNC	ENSG00000087269	tier1	-	-	43	0	0.00	7	44	86.27
NOTCH2NL	0	genome.wustl.edu	37	1	145290438	145290438	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	1	145290438	145290438	C	T	SNP	NOTCH2NL	ENST00000344859	human	ensembl	74_37	+1	known	missense	c.644	p.P215L	0.001	pfscan_EG-like_dom	pfam_EG-like_dom,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	-	no_errors	NOTCH2NL	HGNC	ENSG00000213240	tier1	-	-	176	0	0.00	227	16	6.58
NPAP1	0	genome.wustl.edu	37	15	24922225	24922225	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	15	24922225	24922225	C	T	SNP	NPAP1	ENST00000329468	human	ensembl	74_37	+1	known	missense	c.1211	p.P404L	0.000	NULL	NULL	-	no_errors	NPAP1	HGNC	ENSG00000185823	tier1	-	-	49	0	0.00	42	4	8.70
NPC1L1	0	genome.wustl.edu	37	7	44555412	44555412	+	Silent	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	7	44555412	44555412	G	T	SNP	NPC1L1	ENST00000289547	human	ensembl	74_37	-1	known	silent	c.3867	p.L1289	0.998	pfam_Patched	pfam_Patched,pfscan_SSD	-	no_errors	NPC1L1	HGNC	ENSG00000015520				25	0	0.00	28	2	6.67
NR0B1	0	genome.wustl.edu	37	X	30327395	30327395	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	X	30327395	30327395	G	A	SNP	NR0B1	ENST00000378970	human	ensembl	74_37	-1	known	missense	c.86	p.A29V	0.004	NULL	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_Str_hrmn_rcpt	-	no_errors	NR0B1	HGNC	ENSG00000169297	tier1	-	-	11	0	0.00	2	9	81.82
NR1D1	0	genome.wustl.edu	37	17	38253456	38253456	+	Missense_Mutation	SNP	C	C	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	17	38253456	38253456	C	A	SNP	NR1D1	ENST00000246672	human	ensembl	74_37	-1	known	missense	c.232	p.D78Y	0.367	NULL	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	NR1D1	HGNC	ENSG00000126368	tier1	-	-	114	0	0.00	62	7	10.14
NRXN1	0	genome.wustl.edu	37	2	51255171	51255171	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	2	51255171	51255171	G	T	SNP	NRXN1	ENST00000402717	human	ensembl	74_37	-1	known	missense	c.241	p.L81M	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN1	HGNC	ENSG00000179915	tier1	-	-	10	0	0.00	10	5	33.33
NUP107	0	genome.wustl.edu	37	12	69084420	69084420	+	Missense_Mutation	SNP	C	C	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	12	69084420	69084420	C	G	SNP	NUP107	ENST00000229179	human	ensembl	74_37	+1	known	missense	c.197	p.T66R	0.001	NULL	pfam_Nup84_Nup100	-	no_errors	NUP107	HGNC	ENSG00000111581	tier1	-	-	46	0	0.00	47	21	30.88
NUTM2F	0	genome.wustl.edu	37	9	97082712	97082712	+	Silent	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	9	97082712	97082712	C	T	SNP	NUTM2F	ENST00000253262	human	ensembl	74_37	-1	known	silent	c.1146	p.A382	0.024	NULL	NULL	-	no_errors	NUTM2F	HGNC	ENSG00000130950	tier1	-	-	389	0	0.00	221	272	55.17
OCA2	0	genome.wustl.edu	37	15	28196953	28196953	+	Missense_Mutation	SNP	A	A	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	15	28196953	28196953	A	G	SNP	OCA2	ENST00000354638	human	ensembl	74_37	-1	known	missense	c.1928	p.V643A	1.000	pfam_Cit_transptr-like_dom,pfam_Na/sul_symport,pfam_Arsenical_pump_ArsB,tigrfam_Arsenical_pump_ArsB	pfam_Cit_transptr-like_dom,pfam_Na/sul_symport,pfam_Arsenical_pump_ArsB,tigrfam_Arsenical_pump_ArsB	-	no_errors	OCA2	HGNC	ENSG00000104044	tier1	-	-	79	0	0.00	60	4	6.25
OR10G4	0	genome.wustl.edu	37	11	123886648	123886648	+	Missense_Mutation	SNP	T	T	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	11	123886648	123886648	T	G	SNP	OR10G4	ENST00000320891	human	ensembl	74_37	+1	known	missense	c.367	p.L123V	0.994	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10G4	HGNC	ENSG00000254737				53	0	0.00	64	6	8.57
OR10G9	0	genome.wustl.edu	37	11	123894086	123894086	+	Missense_Mutation	SNP	T	T	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	11	123894086	123894086	T	G	SNP	OR10G9	ENST00000375024	human	ensembl	74_37	+1	known	missense	c.367	p.L123V	0.996	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10G9	HGNC	ENSG00000236981				59	0	0.00	61	15	19.74
OR4Q3	0	genome.wustl.edu	37	14	20215952	20215952	+	Missense_Mutation	SNP	C	C	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	14	20215952	20215952	C	A	SNP	OR4Q3	ENST00000331723	human	ensembl	74_37	+1	known	missense	c.366	p.D122E	0.996	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4Q3	HGNC	ENSG00000182652	tier1	-	-	89	0	0.00	43	27	38.57
OR6K3	0	genome.wustl.edu	37	1	158687308	158687308	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	1	158687308	158687308	C	T	SNP	OR6K3	ENST00000368146	human	ensembl	74_37	-1	known	missense	c.646	p.V216M	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6K3	HGNC	ENSG00000203757				32	0	0.00	28	2	6.67
OR6V1	0	genome.wustl.edu	37	7	142749864	142749864	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	7	142749864	142749864	G	A	SNP	OR6V1	ENST00000418316	human	ensembl	74_37	+1	known	missense	c.427	p.A143T	0.973	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6V1	HGNC	ENSG00000225781				38	0	0.00	33	4	10.81
OR7C2	0	genome.wustl.edu	37	19	15052983	15052983	+	Missense_Mutation	SNP	T	T	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	19	15052983	15052983	T	C	SNP	OR7C2	ENST00000248072	human	ensembl	74_37	+1	known	missense	c.683	p.V228A	0.012	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR7C2	HGNC	ENSG00000127529				69	0	0.00	59	5	7.81
PAK1IP1	0	genome.wustl.edu	37	6	10697578	10697578	+	Missense_Mutation	SNP	T	T	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	6	10697578	10697578	T	G	SNP	PAK1IP1	ENST00000379568	human	ensembl	74_37	+1	known	missense	c.106	p.F36V	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	PAK1IP1	HGNC	ENSG00000111845	tier1	-	-	29	0	0.00	23	20	46.51
PANK3	0	genome.wustl.edu	37	5	167993037	167993037	+	Missense_Mutation	SNP	T	T	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	5	167993037	167993037	T	C	SNP	PANK3	ENST00000239231	human	ensembl	74_37	-1	known	missense	c.616	p.K206E	1.000	pfam_Type_II_PanK,tigrfam_Type_II_PanK	pfam_Type_II_PanK,tigrfam_Type_II_PanK	-	no_errors	PANK3	HGNC	ENSG00000120137	tier1	-	-	53	0	0.00	35	4	10.26
PCDH17	0	genome.wustl.edu	37	13	58299185	58299185	+	Silent	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	13	58299185	58299185	G	T	SNP	PCDH17	ENST00000377918	human	ensembl	74_37	+1	known	silent	c.3237	p.L1079	1.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH17	HGNC	ENSG00000118946	tier1	-	-	41	0	0.00	38	16	29.63
PCDHGC3	0	genome.wustl.edu	37	5	140856511	140856511	+	Silent	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	5	140856511	140856511	C	T	SNP	PCDHGC3	ENST00000308177	human	ensembl	74_37	+1	known	silent	c.828	p.N276	0.709	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGC3	HGNC	ENSG00000240184	tier1	-	-	45	0	0.00	19	10	34.48
PEX6	0	genome.wustl.edu	37	6	42933038	42933038	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	6	42933038	42933038	G	T	SNP	PEX6	ENST00000304611	human	ensembl	74_37	-1	known	missense	c.2540	p.A847D	1.000	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	PEX6	HGNC	ENSG00000124587				23	0	0.00	58	4	6.45
PIEZO1	0	genome.wustl.edu	37	16	88800373	88800375	+	In_Frame_Del	DEL	TCC	TCC	-			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	TCC	TCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	16	88800373	88800375	TCC	-	DEL	PIEZO1	ENST00000301015	human	ensembl	74_37	-1	novel	in_frame_del	c.2270_2268	p.E756in_frame_del	0.000:0.000:0.000	NULL	pfam_Piezo	-	no_errors	PIEZO1	HGNC	ENSG00000103335	tier1			50	0	0.00	37	5	11.90
PIK3C2B	0	genome.wustl.edu	37	1	204433694	204433694	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	1	204433694	204433694	G	T	SNP	PIK3C2B	ENST00000367187	human	ensembl	74_37	-1	known	missense	c.1073	p.T358N	0.990	NULL	pfam_PI3/4_kinase_cat_dom,pfam_PInositide-3_kin_accessory_dom,pfam_PI3K_C2_dom,pfam_PI3K_Ras-bd_dom,pfam_Phox,pfam_C2_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,superfamily_Phox,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,smart_Phox,smart_C2_dom,pfscan_C2_dom,pfscan_Phox,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3C2B	HGNC	ENSG00000133056	tier1	-	-	50	0	0.00	71	4	5.33
PIK3C2G	0	genome.wustl.edu	37	12	18552745	18552745	+	Missense_Mutation	SNP	C	C	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	12	18552745	18552745	C	G	SNP	PIK3C2G	ENST00000538779	human	ensembl	74_37	+1	known	missense	c.2279	p.S760C	0.993	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PI3/4_kinase_cat_dom,pfam_PInositide-3_kin_accessory_dom,pfam_PI3K_C2_dom,pfam_Phox,pfam_PI3K_Ras-bd_dom,pfam_C2_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,superfamily_Phox,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,smart_Phox,smart_C2_dom,pfscan_Phox,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3C2G	HGNC	ENSG00000139144	tier1	-	-	61	0	0.00	65	37	36.27
PIK3CD	0	genome.wustl.edu	37	1	9777670	9777670	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	1	9777670	9777670	G	T	SNP	PIK3CD	ENST00000536656	human	ensembl	74_37	+1	known	missense	c.901	p.D301Y	0.968	superfamily_C2_dom,smart_PI3K_C2_dom	pfam_PI3/4_kinase_cat_dom,pfam_PInositide-3_kin_accessory_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,pfam_PI3K_Ras-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CD	HGNC	ENSG00000171608	tier1	-	-	74	0	0.00	26	62	70.45
PIP4K2B	0	genome.wustl.edu	37	17	36935757	36935757	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	17	36935757	36935757	G	T	SNP	PIP4K2B	ENST00000269554	human	ensembl	74_37	-1	known	missense	c.533	p.T178K	1.000	pfam_PInositol-4-P-5-kinase_core,smart_PInositol-4P-5-kinase_core_sub	pfam_PInositol-4-P-5-kinase_core,smart_PInositol-4P-5-kinase_core_sub	-	no_errors	PIP4K2B	HGNC	ENSG00000141720				34	0	0.00	47	3	6.00
PIP5KL1	0	genome.wustl.edu	37	9	130691998	130691998	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	9	130691998	130691998	G	A	SNP	PIP5KL1	ENST00000388747	human	ensembl	74_37	-1	novel	missense	c.197	p.A66V	1.000	NULL	pfam_PInositol-4-P-5-kinase_core,smart_PInositol-4P-5-kinase_core_sub	-	no_errors	PIP5KL1	HGNC	ENSG00000167103	tier1	-	-	39	0	0.00	48	4	7.69
PLCB4	0	genome.wustl.edu	37	20	9434087	9434087	+	Missense_Mutation	SNP	G	G	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	20	9434087	9434087	G	C	SNP	PLCB4	ENST00000334005	human	ensembl	74_37	+1	known	missense	c.2938	p.E980Q	1.000	pirsf_PLC-beta	pirsf_PLC-beta,pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_PLC-beta_CS,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,prints_Pinositol_PLipase_C,pfscan_C2_dom,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y	-	no_errors	PLCB4	HGNC	ENSG00000101333	tier1	-	-	75	0	0.00	31	50	61.73
PNLIPRP1	0	genome.wustl.edu	37	10	118351287	118351287	+	Silent	SNP	A	A	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	10	118351287	118351287	A	G	SNP	PNLIPRP1	ENST00000358834	human	ensembl	74_37	+1	known	silent	c.54	p.K18	0.057	pfam_Lipase_N,pirsf_Lipoprotein_lipase_LIPH	pfam_Lipase_N,pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,pirsf_Lipoprotein_lipase_LIPH,pfscan_PLAT/LH2_dom,prints_Lipase_panc,prints_Lipase	-	no_errors	PNLIPRP1	HGNC	ENSG00000187021	tier1	-	-	27	0	0.00	17	23	57.50
POTEH	0	genome.wustl.edu	37	22	16266948	16266948	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	22	16266948	16266948	C	T	SNP	POTEH	ENST00000343518	human	ensembl	74_37	-1	known	missense	c.1501	p.E501K	0.003	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	POTEH	HGNC	ENSG00000198062	tier1	-	-	415	0	0.00	325	61	15.76
PPARGC1B	0	genome.wustl.edu	37	5	149216457	149216459	+	In_Frame_Del	DEL	GGA	GGA	-			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	GGA	GGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	5	149216457	149216459	GGA	-	DEL	PPARGC1B	ENST00000309241	human	ensembl	74_37	+1	known	in_frame_del	c.2439_2441	p.E817in_frame_del	0.792:0.855:0.852	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	PPARGC1B	HGNC	ENSG00000155846	tier1			30	0	0.00	18	2	10.00
PPFIA2	0	genome.wustl.edu	37	12	81655762	81655762	+	Silent	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	12	81655762	81655762	C	T	SNP	PPFIA2	ENST00000549396	human	ensembl	74_37	-1	known	silent	c.3773	p.*1258	1.000	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	PPFIA2	HGNC	ENSG00000139220	tier1	-	-	25	0	0.00	36	13	26.53
PPP1R12B	0	genome.wustl.edu	37	1	202407189	202407190	+	Frame_Shift_Ins	INS	-	-	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	1	202407189	202407190	-	T	INS	PPP1R12B	ENST00000480184	human	ensembl	74_37	+1	novel	frame_shift_ins	c.1495_1496	p.F503fs	0.085:0.041	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	PPP1R12B	HGNC	ENSG00000077157	tier1			35	0	0.00	38	3	7.32
PPP1R7	0	genome.wustl.edu	37	2	242089933	242089933	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	2	242089933	242089933	G	A	SNP	PPP1R7	ENST00000234038	human	ensembl	74_37	+1	known	missense	c.23	p.G8E	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_U2A'_phosphoprotein32A_C	-	no_errors	PPP1R7	HGNC	ENSG00000115685	tier1	-	-	44	0	0.00	29	27	48.21
PPP2R2D	0	genome.wustl.edu	37	10	133761153	133761153	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	10	133761153	133761153	G	T	SNP	PPP2R2D	ENST00000455566	human	ensembl	74_37	+1	known	missense	c.847	p.V283L	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_PP2A_PR55,prints_PP2A_PR55	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_PP2A_PR55,prints_PP2A_PR55	-	no_errors	PPP2R2D	HGNC	ENSG00000175470	tier1	-	-	107	0	0.00	26	64	71.11
PRAMEF6	0	genome.wustl.edu	37	1	13000963	13000963	+	Silent	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	1	13000963	13000963	G	A	SNP	PRAMEF6	ENST00000355096	human	ensembl	74_37	-1	known	silent	c.720	p.S240	0.000	NULL	NULL	-	no_errors	PRAMEF6	HGNC	ENSG00000232423	tier1	rs200242081	-	11	0	0.00	14	7	33.33
PRDM6	0	genome.wustl.edu	37	5	122435415	122435415	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	5	122435415	122435415	G	A	SNP	PRDM6	ENST00000407847	human	ensembl	74_37	+1	known	missense	c.659	p.R220H	1.000	NULL	pfam_Znf_C2H2,pfam_SET_dom,smart_SET_dom,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM6	HGNC	ENSG00000061455	tier1	-	-	37	0	0.00	35	4	10.26
PRKDC	0	genome.wustl.edu	37	8	48866998	48866998	+	Silent	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	8	48866998	48866998	C	T	SNP	PRKDC	ENST00000314191	human	ensembl	74_37	-1	known	silent	c.408	p.Q136	0.997	superfamily_ARM-type_fold	pfam_NUC194,pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PRKDC	HGNC	ENSG00000253729	tier1	-	-	98	0	0.00	96	59	38.06
PRRC2C	0	genome.wustl.edu	37	1	171482243	171482243	+	Silent	SNP	T	T	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	1	171482243	171482243	T	C	SNP	PRRC2C	ENST00000392078	human	ensembl	74_37	+1	known	silent	c.222	p.P74	1.000	pfam_BAT2_N	pfam_BAT2_N	-	no_errors	PRRC2C	HGNC	ENSG00000117523	tier1	-	-	51	0	0.00	46	15	24.59
PSMD12	0	genome.wustl.edu	37	17	65346353	65346353	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	17	65346353	65346353	C	T	SNP	PSMD12	ENST00000356126	human	ensembl	74_37	-1	known	missense	c.397	p.E133K	1.000	NULL	pfam_PCI_dom,smart_PCI_dom	-	no_errors	PSMD12	HGNC	ENSG00000197170				42	0	0.00	37	2	5.13
PSMF1	0	genome.wustl.edu	37	20	1146974	1146974	+	RNA	SNP	T	T	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	20	1146974	1146974	T	A	SNP	PSMF1	ENST00000418246	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	PSMF1	HGNC	ENSG00000125818	tier1	-	-	16	0	0.00	22	6	21.43
PTPRVP	0	genome.wustl.edu	37	1	202158058	202158058	+	RNA	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	1	202158058	202158058	G	T	SNP	PTPRVP	ENST00000482597	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.422	-	-	-	no_errors	PTPRVP	HGNC	ENSG00000243323	tier1	-	-	72	0	0.00	66	4	5.71
RAB11B	0	genome.wustl.edu	37	19	8468391	8468391	+	Silent	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	19	8468391	8468391	C	T	SNP	RAB11B	ENST00000328024	human	ensembl	74_37	+1	known	silent	c.606	p.P202	1.000	superfamily_P-loop_NTPase,smart_Ran_GTPase	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB11B	HGNC	ENSG00000185236	tier1	-	-	111	0	0.00	20	87	81.31
RASA1	0	genome.wustl.edu	37	5	86564473	86564474	+	Frame_Shift_Ins	INS	-	-	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	5	86564473	86564474	-	C	INS	RASA1	ENST00000274376	human	ensembl	74_37	+1	known	frame_shift_ins	c.205_206	p.E70fs	0.187:0.178	NULL	pfam_SH2,pfam_RasGAP,pfam_Pleckstrin_homology,pfam_SH3_domain,pfam_C2_dom,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_SH2,smart_SH3_domain,smart_Pleckstrin_homology,smart_C2_dom,smart_RasGAP,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_RasGAP,prints_SH2	-	no_errors	RASA1	HGNC	ENSG00000145715	tier1			30	0	0.00	30	13	30.23
RBL1	0	genome.wustl.edu	37	20	35724277	35724277	+	Nonsense_Mutation	SNP	C	C	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	20	35724277	35724277	C	A	SNP	RBL1	ENST00000373664	human	ensembl	74_37	-1	known	nonsense	c.55	p.E19*	0.997	NULL	pfam_RB_A,pfam_RB_B,pfam_RB_N,pfam_RB_C,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	RBL1	HGNC	ENSG00000080839	tier1	-	-	49	0	0.00	27	24	47.06
RECQL5	0	genome.wustl.edu	37	17	73627067	73627067	+	Silent	SNP	T	T	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	17	73627067	73627067	T	C	SNP	RECQL5	ENST00000317905	human	ensembl	74_37	-1	known	silent	c.1572	p.E524	0.827	NULL	pfam_RecQ_helicase-like_5,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	-	no_errors	RECQL5	HGNC	ENSG00000108469	tier1	-	-	109	0	0.00	9	87	90.62
RFC5	0	genome.wustl.edu	37	12	118463597	118463597	+	Silent	SNP	C	C	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	12	118463597	118463597	C	A	SNP	RFC5	ENST00000454402	human	ensembl	74_37	+1	known	silent	c.627	p.S209	1.000	superfamily_P-loop_NTPase	pfam_Rep_factorC_C_dom,pfam_ATPase_AAA_core,pfam_DNA_helicase_Holl-junc_RuvB_N,pfam_DUF815,superfamily_P-loop_NTPase,superfamily_DNA_pol3_clamp-load_cplx_C,smart_AAA+_ATPase	-	no_errors	RFC5	HGNC	ENSG00000111445				48	0	0.00	55	3	5.17
RFX3	0	genome.wustl.edu	37	9	3266289	3266289	+	Silent	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	9	3266289	3266289	G	A	SNP	RFX3	ENST00000382004	human	ensembl	74_37	-1	known	silent	c.1374	p.A458	1.000	NULL	pfam_RFX1_trans_act,pfam_DNA-bd_RFX	-	no_errors	RFX3	HGNC	ENSG00000080298	tier1	-	-	45	0	0.00	10	18	64.29
RGR	0	genome.wustl.edu	37	10	86007670	86007670	+	RNA	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	10	86007670	86007670	C	T	SNP	RGR	ENST00000469446	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RGR	HGNC	ENSG00000148604	tier1	-	-	16	0	0.00	1	9	90.00
RNA28S5	0	genome.wustl.edu	37	GL000220.1	118086	118086	+	RNA	SNP	C	C	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	GL000220.1	118086	118086	C	G	SNP	RNA28S5	ENST00000607521	human	ensembl	74_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	RNA28S5	HGNC	ENSG00000266658	tier1	-	-	31	0	0.00	16	10	38.46
ROR1	0	genome.wustl.edu	37	1	64515405	64515405	+	Missense_Mutation	SNP	C	C	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	1	64515405	64515405	C	A	SNP	ROR1	ENST00000371079	human	ensembl	74_37	+1	known	missense	c.206	p.T69K	1.000	pirsf_Tyr_kinase_rcpt_ROR,pfam_Ig_I-set,pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	pirsf_Tyr_kinase_rcpt_ROR,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Kringle,pfam_Frizzled_dom,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Kringle-like,superfamily_Frizzled_dom,smart_Ig_sub,smart_Ig_sub2,smart_Kringle,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Frizzled_dom,pfscan_Kringle,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	ROR1	HGNC	ENSG00000185483				59	0	0.00	36	3	7.69
ROR2	0	genome.wustl.edu	37	9	94499701	94499701	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	9	94499701	94499701	C	T	SNP	ROR2	ENST00000375708	human	ensembl	74_37	-1	known	missense	c.594	p.M198I	1.000	pirsf_Tyr_kinase_rcpt_ROR,pfam_Frizzled_dom,superfamily_Frizzled_dom,pfscan_Frizzled_dom	pirsf_Tyr_kinase_rcpt_ROR,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Kringle,pfam_Frizzled_dom,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Kringle-like,superfamily_Frizzled_dom,smart_Ig_sub,smart_Ig_sub2,smart_Kringle,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Frizzled_dom,pfscan_Kringle,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	ROR2	HGNC	ENSG00000169071	tier1	-	-	78	0	0.00	21	45	68.18
RREB1	0	genome.wustl.edu	37	6	7230282	7230282	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	6	7230282	7230282	G	T	SNP	RREB1	ENST00000379938	human	ensembl	74_37	+1	known	missense	c.1950	p.Q650H	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	RREB1	HGNC	ENSG00000124782	tier1	-	-	80	0	0.00	78	5	6.02
SAMD3	0	genome.wustl.edu	37	6	130536495	130536495	+	RNA	DEL	T	T	-			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	6	130536495	130536495	T	-	DEL	SAMD3	ENST00000533296	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	SAMD3	HGNC	ENSG00000164483	tier1			20	0	0.00	18	3	14.29
SCGB2A1	0	genome.wustl.edu	37	11	61978031	61978031	+	Missense_Mutation	SNP	A	A	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	11	61978031	61978031	A	G	SNP	SCGB2A1	ENST00000244930	human	ensembl	74_37	+1	known	missense	c.202	p.N68D	0.000	pfam_Secretoglobin,superfamily_Secretoglobin	pfam_Secretoglobin,superfamily_Secretoglobin	-	no_errors	SCGB2A1	HGNC	ENSG00000124939	tier1	-	-	52	0	0.00	69	4	5.48
SEC24C	0	genome.wustl.edu	37	10	75530546	75530546	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	10	75530546	75530546	G	A	SNP	SEC24C	ENST00000339365	human	ensembl	74_37	+1	known	missense	c.3134	p.R1045Q	0.999	NULL	pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Znf_Sec23_Sec24,pfam_Gelsolin_dom,superfamily_Sec23/24_helical_dom,superfamily_Znf_Sec23_Sec24	-	no_errors	SEC24C	HGNC	ENSG00000176986	tier1	-	-	40	0	0.00	56	11	16.42
SETDB2	0	genome.wustl.edu	37	13	50034315	50034315	+	Missense_Mutation	SNP	A	A	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	13	50034315	50034315	A	T	SNP	SETDB2	ENST00000317257	human	ensembl	74_37	+1	known	missense	c.89	p.N30I	1.000	NULL	pfam_SET_dom,pfam_Pre-SET_dom,pfam_Methyl_CpG_DNA-bd,superfamily_DNA-bd_dom,smart_Methyl_CpG_DNA-bd,smart_Pre-SET_Zn-bd_sub,smart_SET_dom,pfscan_Methyl_CpG_DNA-bd,pfscan_SET_dom,pfscan_Pre-SET_dom	-	no_errors	SETDB2	HGNC	ENSG00000136169	tier1	-	-	52	0	0.00	33	27	45.00
SGCZ	0	genome.wustl.edu	37	8	14022123	14022123	+	Missense_Mutation	SNP	C	C	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	8	14022123	14022123	C	A	SNP	SGCZ	ENST00000382080	human	ensembl	74_37	-1	known	missense	c.513	p.E171D	1.000	pfam_Sarcoglycan	pfam_Sarcoglycan	-	no_errors	SGCZ	HGNC	ENSG00000185053				50	0	0.00	38	2	5.00
SH2D3A	0	genome.wustl.edu	37	19	6761131	6761131	+	RNA	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	19	6761131	6761131	G	A	SNP	SH2D3A	ENST00000599563	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SH2D3A	HGNC	ENSG00000125731	tier1	-	-	13	0	0.00	0	7	100.00
SH3TC2	0	genome.wustl.edu	37	5	148407322	148407322	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	5	148407322	148407322	C	T	SNP	SH3TC2	ENST00000515425	human	ensembl	74_37	-1	known	missense	c.1973	p.R658H	0.998	NULL	pfam_SH3_domain,pfam_TPR_1,superfamily_SH3_domain,smart_SH3_domain,smart_TPR_repeat,pfscan_SH3_domain	-	no_errors	SH3TC2	HGNC	ENSG00000169247	tier1	rs138040787	-	42	0	0.00	20	14	41.18
SIRT3	0	genome.wustl.edu	37	11	218900	218900	+	Missense_Mutation	SNP	C	C	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	11	218900	218900	C	G	SNP	SIRT3	ENST00000382743	human	ensembl	74_37	-1	known	missense	c.1111	p.E371Q	0.073	pirsf_NAD-dep_deAcase_SIR2_class_I,pfscan_Ssirtuin_cat_dom	pfam_Sirtuin,pirsf_NAD-dep_deAcase_SIR2_class_I,pfscan_Ssirtuin_cat_dom	-	no_errors	SIRT3	HGNC	ENSG00000142082	tier1	-	-	51	0	0.00	41	12	22.64
SLC1A5	0	genome.wustl.edu	37	19	47287780	47287780	+	Frame_Shift_Del	DEL	A	A	-			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	19	47287780	47287780	A	-	DEL	SLC1A5	ENST00000542575	human	ensembl	74_37	-1	known	frame_shift_del	c.603	p.R202fs	1.000	pfam_Na-dicarboxylate_symporter	pfam_Na-dicarboxylate_symporter,prints_Na-dicarboxylate_symporter	-	no_errors	SLC1A5	HGNC	ENSG00000105281	tier1			46	0	0.00	34	2	5.56
SLC24A2	0	genome.wustl.edu	37	9	19528098	19528098	+	Silent	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	9	19528098	19528098	G	T	SNP	SLC24A2	ENST00000341998	human	ensembl	74_37	-1	known	silent	c.1518	p.S506	1.000	tigrfam_K/Na/Ca-exchanger	pfam_NaCa_Exmemb,tigrfam_K/Na/Ca-exchanger	-	no_errors	SLC24A2	HGNC	ENSG00000155886	tier1	-	-	45	0	0.00	24	3	11.11
SLC25A44	0	genome.wustl.edu	37	1	156180849	156180849	+	RNA	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	1	156180849	156180849	G	T	SNP	SLC25A44	ENST00000469537	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SLC25A44	HGNC	ENSG00000160785	tier1	-	-	23	0	0.00	19	4	17.39
SLC26A10	0	genome.wustl.edu	37	12	58017820	58017820	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	12	58017820	58017820	G	A	SNP	SLC26A10	ENST00000320442	human	ensembl	74_37	+1	known	missense	c.1166	p.R389H	1.000	pfam_Sulph_transpt	pfam_Sulph_transpt,pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom	-	no_errors	SLC26A10	HGNC	ENSG00000135502	tier1	-	-	50	0	0.00	8	35	81.40
SLC39A7	0	genome.wustl.edu	37	6	33170809	33170809	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	6	33170809	33170809	G	A	SNP	SLC39A7	ENST00000374675	human	ensembl	74_37	+1	known	missense	c.1063	p.V355I	1.000	pfam_ZIP	pfam_ZIP,prints_Kininogen	-	no_errors	SLC39A7	HGNC	ENSG00000112473	tier1	-	-	61	0	0.00	85	23	21.30
SMG1P1	0	genome.wustl.edu	37	16	22470724	22470724	+	RNA	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	16	22470724	22470724	G	A	SNP	SMG1P1	ENST00000308347	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SMG1P1	HGNC	ENSG00000237296	tier1	-	-	23	0	0.00	37	7	15.91
SNORD115-10	0	genome.wustl.edu	37	15	25432690	25432690	+	RNA	SNP	T	T	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	15	25432690	25432690	T	G	SNP	SNORD115-10	ENST00000365073	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.009	-	-	-	no_errors	SNORD115-10	HGNC	ENSG00000201943	tier1	-	-	147	0	0.00	75	87	53.70
SNORD115-12	0	genome.wustl.edu	37	15	25436571	25436571	+	RNA	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	15	25436571	25436571	G	T	SNP	SNORD115-12	ENST00000362583	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.876	-	-	-	no_errors	SNORD115-12	HGNC	ENSG00000199453	tier1	-	-	155	0	0.00	50	70	58.33
SNRK	0	genome.wustl.edu	37	3	43344790	43344790	+	Missense_Mutation	SNP	T	T	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	3	43344790	43344790	T	A	SNP	SNRK	ENST00000296088	human	ensembl	74_37	+1	known	missense	c.95	p.L32H	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom	-	no_errors	SNRK	HGNC	ENSG00000163788	tier1	-	-	52	0	0.00	18	9	33.33
SOGA1	0	genome.wustl.edu	37	20	35422823	35422823	+	Missense_Mutation	SNP	T	T	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	20	35422823	35422823	T	C	SNP	SOGA1	ENST00000237536	human	ensembl	74_37	-1	known	missense	c.3662	p.D1221G	1.000	NULL	pfam_SOGA	-	no_errors	SOGA1	HGNC	ENSG00000149639	tier1	-	-	46	0	0.00	47	35	42.17
SPATA13	0	genome.wustl.edu	37	13	24798141	24798141	+	Missense_Mutation	SNP	T	T	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	13	24798141	24798141	T	A	SNP	SPATA13	ENST00000382108	human	ensembl	74_37	+1	known	missense	c.1074	p.H358Q	0.980	NULL	pfam_DH-domain,pfam_SH3_domain,pfam_SH3_2,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_SH3_domain,smart_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	SPATA13	HGNC	ENSG00000182957	tier1	-	-	83	0	0.00	62	28	30.77
SPATA31D1	0	genome.wustl.edu	37	9	84608189	84608189	+	Missense_Mutation	SNP	T	T	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	9	84608189	84608189	T	C	SNP	SPATA31D1	ENST00000344803	human	ensembl	74_37	+1	known	missense	c.2804	p.L935P	0.000	NULL	NULL	-	no_errors	SPATA31D1	HGNC	ENSG00000214929	tier1	-	-	73	0	0.00	48	56	53.85
SRCAP	0	genome.wustl.edu	37	16	30749528	30749529	+	Frame_Shift_Del	DEL	CG	CG	-			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	CG	CG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	16	30749528	30749529	CG	-	DEL	SRCAP	ENST00000262518	human	ensembl	74_37	+1	known	frame_shift_del	c.8167_8168	p.R2723fs	1.000:1.000	NULL	pfam_SNF2_N,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,smart_AT_hook_DNA-bd_motif,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,prints_AT_hook-like	-	no_errors	SRCAP	HGNC	ENSG00000080603	tier1			78	0	0.00	76	9	10.59
STARD9	0	genome.wustl.edu	37	15	42867918	42867918	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	15	42867918	42867918	C	T	SNP	STARD9	ENST00000290607	human	ensembl	74_37	+1	known	missense	c.5	p.A2V	1.000	smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,pfam_START_lipid-bd_dom,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,pfscan_START_lipid-bd_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	STARD9	HGNC	ENSG00000159433	tier1	-	-	224	0	0.00	220	104	31.80
STAT5A	0	genome.wustl.edu	37	17	40457645	40457645	+	Silent	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	17	40457645	40457645	G	A	SNP	STAT5A	ENST00000345506	human	ensembl	74_37	+1	known	silent	c.1398	p.V466	1.000	pfam_STAT_TF_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_STAT_TF_DNA-bd,pfam_STAT_TF_alpha,pfam_STAT_TF_prot_interaction,pfam_SH2,superfamily_p53-like_TF_DNA-bd,superfamily_STAT_TF_coiled-coil,superfamily_STAT_TF_prot_interaction,smart_STAT_TF_prot_interaction,smart_SH2,pfscan_SH2	-	no_errors	STAT5A	HGNC	ENSG00000126561	tier1	-	-	89	0	0.00	73	4	5.19
SUN2	0	genome.wustl.edu	37	22	39134611	39134611	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	22	39134611	39134611	G	T	SNP	SUN2	ENST00000216064	human	ensembl	74_37	-1	known	missense	c.1928	p.P643H	1.000	pfam_Sad1_UNC_C,superfamily_Galactose-bd-like	pfam_Sad1_UNC_C,superfamily_Galactose-bd-like	-	no_errors	SUN2	HGNC	ENSG00000100242	tier1	-	-	70	0	0.00	44	4	8.33
SUPT6H	0	genome.wustl.edu	37	17	27003311	27003311	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	17	27003311	27003311	C	T	SNP	SUPT6H	ENST00000314616	human	ensembl	74_37	+1	known	missense	c.760	p.R254C	1.000	pirsf_TF_Spt6	pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_SH2,superfamily_NA-bd_OB-fold,smart_YqgF/RNaseH-like_dom,smart_RNA-binding_domain_S1,smart_SH2,pirsf_TF_Spt6,pfscan_SH2,pfscan_Rbsml_prot_S1_RNA-bd_dom	-	no_errors	SUPT6H	HGNC	ENSG00000109111				60	0	0.00	37	4	9.76
SYNE1	0	genome.wustl.edu	37	6	152746668	152746668	+	Splice_Site	SNP	T	T	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	6	152746668	152746668	T	C	SNP	SYNE1	ENST00000448038	human	ensembl	74_37	-1	known	splice_site	c.5138-2	e38-2	0.607	-	-	-	no_errors	SYNE1	HGNC	ENSG00000131018	tier1	-	-	59	0	0.00	30	40	57.14
SYNE1	0	genome.wustl.edu	37	6	152751730	152751730	+	Missense_Mutation	SNP	A	A	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	6	152751730	152751730	A	C	SNP	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	missense	c.4576	p.L1526V	0.990	superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018	tier1	-	-	44	0	0.00	47	10	17.24
TAF2	0	genome.wustl.edu	37	8	120795685	120795685	+	Missense_Mutation	SNP	T	T	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	8	120795685	120795685	T	G	SNP	TAF2	ENST00000378164	human	ensembl	74_37	-1	known	missense	c.2048	p.D683A	1.000	NULL	pfam_Peptidase_M1_N,superfamily_ARM-type_fold	-	no_errors	TAF2	HGNC	ENSG00000064313	tier1	-	-	45	0	0.00	77	24	23.76
TBC1D21	0	genome.wustl.edu	37	15	74177204	74177204	+	Silent	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	15	74177204	74177204	C	T	SNP	TBC1D21	ENST00000300504	human	ensembl	74_37	+1	known	silent	c.450	p.L150	0.947	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D21	HGNC	ENSG00000167139	tier1	-	-	42	0	0.00	27	17	38.64
TBC1D9	0	genome.wustl.edu	37	4	141580817	141580817	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	4	141580817	141580817	C	T	SNP	TBC1D9	ENST00000442267	human	ensembl	74_37	-1	known	missense	c.1846	p.E616K	1.000	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,pfam_GRAM,superfamily_Rab-GTPase-TBC_dom,smart_GRAM,smart_Rab-GTPase-TBC_dom,pfscan_EF_hand_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D9	HGNC	ENSG00000109436	tier1	-	-	49	0	0.00	30	19	38.78
TCAM1P	0	genome.wustl.edu	37	17	61939715	61939715	+	RNA	SNP	C	C	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	17	61939715	61939715	C	A	SNP	TCAM1P	ENST00000478379	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.037	-	-	-	no_errors	TCAM1P	HGNC	ENSG00000240280				40	0	0.00	52	6	10.34
TDRD15	0	genome.wustl.edu	37	2	21363593	21363593	+	Missense_Mutation	SNP	T	T	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	2	21363593	21363593	T	G	SNP	TDRD15	ENST00000405799	human	ensembl	74_37	+1	novel	missense	c.3254	p.L1085R	0.994	NULL	pfam_Tudor,superfamily_Staphylococal_nuclease_OB-fold,smart_Tudor,pfscan_Tudor	-	no_errors	TDRD15	HGNC	ENSG00000218819	tier1	-	-	90	0	0.00	62	50	44.25
TDRD15	0	genome.wustl.edu	37	2	21364417	21364417	+	Missense_Mutation	SNP	T	T	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	2	21364417	21364417	T	A	SNP	TDRD15	ENST00000405799	human	ensembl	74_37	+1	novel	missense	c.4078	p.Y1360N	0.996	pfam_Tudor,smart_Tudor,pfscan_Tudor	pfam_Tudor,superfamily_Staphylococal_nuclease_OB-fold,smart_Tudor,pfscan_Tudor	-	no_errors	TDRD15	HGNC	ENSG00000218819	tier1	-	-	33	0	0.00	17	29	63.04
TGFBR2	0	genome.wustl.edu	37	3	30664745	30664745	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	3	30664745	30664745	C	T	SNP	TGFBR2	ENST00000359013	human	ensembl	74_37	+1	known	missense	c.149	p.T50I	0.053	pirsf_Transform_growth_fac-b_typ-2	pirsf_Transform_growth_fac-b_typ-2,pfam_Transforming_GF_b_rcpt_2_ecto,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_TGFB_receptor,pfscan_Prot_kinase_dom	-	no_errors	TGFBR2	HGNC	ENSG00000163513	tier1	-	-	84	0	0.00	47	27	36.49
TMEFF1	0	genome.wustl.edu	37	9	103271286	103271286	+	Splice_Site	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	9	103271286	103271286	G	T	SNP	TMEFF1	ENST00000374879	human	ensembl	74_37	+1	known	splice_site	c.307-1	e3-1	1.000	-	-	-	no_errors	TMEFF1	HGNC	ENSG00000241697				38	0	0.00	54	3	5.26
TMEM255A	0	genome.wustl.edu	37	X	119402112	119402112	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	X	119402112	119402112	G	T	SNP	TMEM255A	ENST00000309720	human	ensembl	74_37	-1	known	missense	c.878	p.A293D	1.000	NULL	NULL	-	no_errors	TMEM255A	HGNC	ENSG00000125355	tier1	-	-	43	0	0.00	33	4	10.81
TNKS1BP1	0	genome.wustl.edu	37	11	57085349	57085349	+	Silent	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	11	57085349	57085349	G	A	SNP	TNKS1BP1	ENST00000358252	human	ensembl	74_37	-1	known	silent	c.741	p.S247	0.000	NULL	NULL	-	no_errors	TNKS1BP1	HGNC	ENSG00000149115	tier1	-	-	30	0	0.00	13	19	59.38
TP53	0	genome.wustl.edu	37	17	7577094	7577094	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	17	7577094	7577094	G	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.844	p.R282W	0.997	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	rs28934574	-	47	0	0.00	11	30	73.17
TRIM28	0	genome.wustl.edu	37	19	59060995	59060995	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	19	59060995	59060995	C	T	SNP	TRIM28	ENST00000253024	human	ensembl	74_37	+1	known	missense	c.1960	p.P654S	1.000	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Znf_RING,pfscan_Znf_PHD-finger	pfam_Znf_B-box,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Znf_PHD,smart_Bromodomain,pfscan_Znf_B-box,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	TRIM28	HGNC	ENSG00000130726	tier1	-	-	43	0	0.00	43	4	8.51
TRIM42	0	genome.wustl.edu	37	3	140407140	140407140	+	Missense_Mutation	SNP	T	T	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	3	140407140	140407140	T	A	SNP	TRIM42	ENST00000286349	human	ensembl	74_37	+1	known	missense	c.1616	p.M539K	0.210	NULL	pfam_Znf_B-box,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Znf_B-box,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM42	HGNC	ENSG00000155890				52	0	0.00	30	4	11.76
TRIM46	0	genome.wustl.edu	37	1	155156434	155156434	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	1	155156434	155156434	G	A	SNP	TRIM46	ENST00000334634	human	ensembl	74_37	+1	known	missense	c.2048	p.C683Y	1.000	superfamily_ConA-like_lec_gl_sf,pfscan_B30.2/SPRY	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,pfscan_Znf_B-box	-	no_errors	TRIM46	HGNC	ENSG00000163462	tier1	-	-	66	0	0.00	69	5	6.76
TRPC1	0	genome.wustl.edu	37	3	142467210	142467210	+	Silent	SNP	A	A	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	3	142467210	142467210	A	G	SNP	TRPC1	ENST00000476941	human	ensembl	74_37	+1	known	silent	c.540	p.K180	0.996	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,tigrfam_TRP_channel	pfam_TRP_dom,pfam_Ion_trans_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,prints_TRPC1_channel,prints_TRPC_channel,tigrfam_TRP_channel	-	no_errors	TRPC1	HGNC	ENSG00000144935	tier1	-	-	66	0	0.00	62	4	6.06
TRPM3	0	genome.wustl.edu	37	9	74061672	74061672	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	9	74061672	74061672	C	T	SNP	TRPM3	ENST00000423814	human	ensembl	74_37	-1	known	missense	c.80	p.R27H	0.997	NULL	pfam_Ion_trans_dom	-	no_errors	TRPM3	HGNC	ENSG00000083067	tier1	-	-	74	0	0.00	50	64	56.14
TSHR	0	genome.wustl.edu	37	14	81557442	81557442	+	Missense_Mutation	SNP	T	T	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	14	81557442	81557442	T	C	SNP	TSHR	ENST00000298171	human	ensembl	74_37	+1	known	missense	c.422	p.F141S	1.000	prints_TSH_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_TSH_rcpt,prints_Gphrmn_rcpt_fam,prints_GPCR_Rhodpsn,prints_FSH_rcpt,prints_LSH_rcpt	-	no_errors	TSHR	HGNC	ENSG00000165409	tier1	-	-	29	0	0.00	29	13	30.95
TSPEAR	0	genome.wustl.edu	37	21	45950995	45950995	+	Silent	SNP	T	T	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	21	45950995	45950995	T	C	SNP	TSPEAR	ENST00000323084	human	ensembl	74_37	-1	known	silent	c.564	p.P188	0.000	superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	pfam_EPTP,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_EAR	-	no_errors	TSPEAR	HGNC	ENSG00000175894				56	0	0.00	52	3	5.36
TXNL4B	0	genome.wustl.edu	37	16	72122990	72122990	+	Silent	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	16	72122990	72122990	C	T	SNP	TXNL4B	ENST00000268483	human	ensembl	74_37	-1	known	silent	c.180	p.L60	0.998	pfam_mRNA_splic_U5,pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold,pirsf_mRNA_splic_U5	pfam_mRNA_splic_U5,pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold,pirsf_mRNA_splic_U5	-	no_errors	TXNL4B	HGNC	ENSG00000140830	tier1	-	-	77	0	0.00	65	4	5.80
UBE2K	0	genome.wustl.edu	37	4	39776478	39776478	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	4	39776478	39776478	G	T	SNP	UBE2K	ENST00000510719	human	ensembl	74_37	+1	known	missense	c.88	p.G30C	0.909	NULL	NULL	-	no_errors	UBE2K	HGNC	ENSG00000078140	tier1	-	-	30	0	0.00	19	4	17.39
UCP3	0	genome.wustl.edu	37	11	73715552	73715552	+	Missense_Mutation	SNP	A	A	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	11	73715552	73715552	A	C	SNP	UCP3	ENST00000314032	human	ensembl	74_37	-1	known	missense	c.620	p.L207R	1.000	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_uncoupling,prints_Mit_carrier	-	no_errors	UCP3	HGNC	ENSG00000175564	tier1	-	-	61	0	0.00	29	42	59.15
UGT1A6	0	genome.wustl.edu	37	2	234601834	234601834	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	2	234601834	234601834	G	A	SNP	UGT1A6	ENST00000305139	human	ensembl	74_37	+1	known	missense	c.184	p.E62K	0.092	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT1A6	HGNC	ENSG00000167165	tier1	-	-	53	0	0.00	43	14	24.56
USP33	0	genome.wustl.edu	37	1	78200089	78200089	+	Missense_Mutation	SNP	A	A	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	1	78200089	78200089	A	C	SNP	USP33	ENST00000357428	human	ensembl	74_37	-1	known	missense	c.560	p.L187W	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_Pept_C19_DUSP,pfam_Znf_UBP,smart_Znf_UBP,smart_Pept_C19_DUSP,pfscan_Znf_UBP,pfscan_Peptidase_C19/C67	-	no_errors	USP33	HGNC	ENSG00000077254	tier1	-	-	110	0	0.00	40	58	59.18
USP34	0	genome.wustl.edu	37	2	61510280	61510280	+	Missense_Mutation	SNP	C	C	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	2	61510280	61510280	C	G	SNP	USP34	ENST00000398571	human	ensembl	74_37	-1	known	missense	c.4998	p.E1666D	1.000	NULL	pfam_Peptidase_C19/C67,superfamily_ARM-type_fold,pfscan_Peptidase_C19/C67	-	no_errors	USP34	HGNC	ENSG00000115464	tier1	-	-	43	0	0.00	29	38	56.72
USP34	0	genome.wustl.edu	37	2	61575959	61575959	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	2	61575959	61575959	C	T	SNP	USP34	ENST00000398571	human	ensembl	74_37	-1	known	missense	c.1606	p.D536N	1.000	NULL	pfam_Peptidase_C19/C67,superfamily_ARM-type_fold,pfscan_Peptidase_C19/C67	-	no_errors	USP34	HGNC	ENSG00000115464	tier1	-	-	41	0	0.00	12	32	72.73
VCAN	0	genome.wustl.edu	37	5	82816505	82816505	+	Missense_Mutation	SNP	A	A	C			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	5	82816505	82816505	A	C	SNP	VCAN	ENST00000265077	human	ensembl	74_37	+1	known	missense	c.2380	p.S794R	0.111	NULL	pfam_Link,pfam_C-type_lectin,pfam_Ig_V-set,pfam_EG-like_dom,pfam_Sushi_SCR_CCP,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_Ig_sub,smart_Link,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like_dom,prints_Link	-	no_errors	VCAN	HGNC	ENSG00000038427	tier1	-	-	50	0	0.00	44	15	25.00
VPS13D	0	genome.wustl.edu	37	1	12398045	12398046	+	RNA	INS	-	-	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	1	12398045	12398046	-	A	INS	VPS13D	ENST00000487188	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.002	-	-	-	no_errors	VPS13D	HGNC	ENSG00000048707	tier1			10	0	0.00	9	2	18.18
WDFY3-AS2	0	genome.wustl.edu	37	4	85887683	85887683	+	RNA	SNP	T	T	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	4	85887683	85887683	T	A	SNP	WDFY3-AS2	ENST00000451762	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	WDFY3-AS2	HGNC	ENSG00000180769	tier1	-	-	64	0	0.00	56	26	31.33
XIRP2	0	genome.wustl.edu	37	2	168105148	168105148	+	Missense_Mutation	SNP	A	A	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	2	168105148	168105148	A	T	SNP	XIRP2	ENST00000295237	human	ensembl	74_37	+1	known	missense	c.7246	p.T2416S	0.021	NULL	pfam_Actin-binding_Xin_repeat	-	no_errors	XIRP2	HGNC	ENSG00000163092	tier1	-	-	74	0	0.00	53	33	38.37
ZDHHC5	0	genome.wustl.edu	37	11	57449977	57449977	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	11	57449977	57449977	G	T	SNP	ZDHHC5	ENST00000287169	human	ensembl	74_37	+1	known	missense	c.188	p.S63I	1.000	NULL	pfam_Znf_DHHC_palmitoyltrfase,superfamily_Plexin-like_fold,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC5	HGNC	ENSG00000156599	tier1	-	-	73	0	0.00	69	26	27.37
ZFYVE9	0	genome.wustl.edu	37	1	52747421	52747421	+	Silent	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	1	52747421	52747421	G	T	SNP	ZFYVE9	ENST00000287727	human	ensembl	74_37	+1	known	silent	c.2958	p.P986	0.158	pirsf_Znf_FYVE_SARA/endofin	pfam_DUF3480,pfam_SARA_Smad-bd,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pirsf_Znf_FYVE_SARA/endofin,pfscan_Znf_FYVE-rel	-	no_errors	ZFYVE9	HGNC	ENSG00000157077	tier1	-	-	54	0	0.00	75	4	5.06
ZNF148	0	genome.wustl.edu	37	3	124952122	124952122	+	Missense_Mutation	SNP	T	T	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	3	124952122	124952122	T	A	SNP	ZNF148	ENST00000360647	human	ensembl	74_37	-1	known	missense	c.1448	p.N483I	0.905	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF148	HGNC	ENSG00000163848	tier1	-	-	35	0	0.00	12	6	33.33
ZNF169	0	genome.wustl.edu	37	9	97063005	97063005	+	Missense_Mutation	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	9	97063005	97063005	C	T	SNP	ZNF169	ENST00000395395	human	ensembl	74_37	+1	known	missense	c.1165	p.L389F	0.174	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF169	HGNC	ENSG00000175787	tier1	-	-	39	0	0.00	57	11	16.18
ZNF217	0	genome.wustl.edu	37	20	52198102	52198102	+	Missense_Mutation	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	20	52198102	52198102	G	A	SNP	ZNF217	ENST00000302342	human	ensembl	74_37	-1	known	missense	c.1264	p.P422S	0.579	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF217	HGNC	ENSG00000171940				20	0	0.00	28	5	14.29
ZNF439	0	genome.wustl.edu	37	19	11979379	11979379	+	Missense_Mutation	SNP	T	T	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	19	11979379	11979379	T	A	SNP	ZNF439	ENST00000304030	human	ensembl	74_37	+1	known	missense	c.1495	p.L499I	0.299	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF439	HGNC	ENSG00000171291	tier1	-	-	49	0	0.00	52	4	7.14
ZNF587B	0	genome.wustl.edu	37	19	58353430	58353430	+	Missense_Mutation	SNP	A	A	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	19	58353430	58353430	A	G	SNP	ZNF587B	ENST00000594901	human	ensembl	74_37	+1	novel	missense	c.1388	p.K463R	0.992	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF587B	HGNC	ENSG00000269343	tier1	-	-	72	0	0.00	16	58	78.38
ZNF696	0	genome.wustl.edu	37	8	144378523	144378523	+	Missense_Mutation	SNP	G	G	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	8	144378523	144378523	G	T	SNP	ZNF696	ENST00000330143	human	ensembl	74_37	+1	known	missense	c.678	p.K226N	0.079	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF696	HGNC	ENSG00000185730				35	0	0.00	54	6	10.00
ZNF697	0	genome.wustl.edu	37	1	120165820	120165820	+	Silent	SNP	G	G	A			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	1	120165820	120165820	G	A	SNP	ZNF697	ENST00000421812	human	ensembl	74_37	-1	known	silent	c.1146	p.G382	0.996	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF697	HGNC	ENSG00000143067	tier1	-	-	31	0	0.00	8	35	81.40
ZNF814	0	genome.wustl.edu	37	19	58384289	58384289	+	Silent	SNP	A	A	G			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	19	58384289	58384289	A	G	SNP	ZNF814	ENST00000435989	human	ensembl	74_37	-1	known	silent	c.2469	p.T823	0.981	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF814	HGNC	ENSG00000204514	tier1	-	-	115	0	0.00	48	36	42.86
ZNF846	0	genome.wustl.edu	37	19	9875674	9875674	+	RNA	SNP	C	C	T			TCGA-2H-A9GQ-01A-11D-A37C-09	TCGA-2H-A9GQ-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	25eb1b50-dc9d-4d60-97be-336a33721453	38eb5d2e-28e0-4cb8-94bd-897c952276a4	19	9875674	9875674	C	T	SNP	ZNF846	ENST00000587650	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.016	-	-	-	no_errors	ZNF846	HGNC	ENSG00000196605	tier1	-	-	31	0	0.00	22	4	15.38
