Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
AADACL2	0	genome.wustl.edu	37	3	151451827	151451827	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	151451827	151451827	G	T	SNP	AADACL2	ENST00000356517	human	ensembl	74_37	+1	known	missense	c.4	p.G2W	0.045	pirsf_Arylacetamide_deacetylase	pfam_AB_hydrolase_3,pfam_CarbesteraseB,pfam_Steryl_acetyl_hydrolase,pirsf_Arylacetamide_deacetylase	-	no_errors	AADACL2	HGNC	ENSG00000197953				110	0	0.00	76	4	5.00
ABCA6	0	genome.wustl.edu	37	17	67125826	67125826	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	67125826	67125826	T	C	SNP	ABCA6	ENST00000284425	human	ensembl	74_37	-1	known	missense	c.858	p.I286M	0.127	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA6	HGNC	ENSG00000154262	tier1	-	-	27	0	0.00	38	7	15.56
ABCA6	0	genome.wustl.edu	37	17	67125826	67125826	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	67125826	67125826	T	C	SNP	ABCA6	ENST00000284425	human	ensembl	74_37	-1	known	missense	c.858	p.I286M	0.127	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA6	HGNC	ENSG00000154262	tier1	-	-	85	0	0.00	38	7	15.56
ABCC1	0	genome.wustl.edu	37	16	16103632	16103632	+	Splice_Site	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	16103632	16103632	G	T	SNP	ABCC1	ENST00000399408	human	ensembl	74_37	+1	known	splice_site	c.226-1	e3-1	1.000	-	-	-	no_errors	ABCC1	HGNC	ENSG00000103222	tier1	-	-	79	0	0.00	65	4	5.80
ABCC11	0	genome.wustl.edu	37	16	48264412	48264412	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	48264412	48264412	C	T	SNP	ABCC11	ENST00000356608	human	ensembl	74_37	-1	known	missense	c.172	p.V58I	0.000	NULL	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC11	HGNC	ENSG00000121270	tier1	-	-	87	0	0.00	71	4	5.33
ABCC11	0	genome.wustl.edu	37	16	48264412	48264412	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	48264412	48264412	C	T	SNP	ABCC11	ENST00000356608	human	ensembl	74_37	-1	known	missense	c.172	p.V58I	0.000	NULL	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC11	HGNC	ENSG00000121270	tier1	-	-	92	0	0.00	71	4	5.33
ABCF1	0	genome.wustl.edu	37	6	30545854	30545854	+	Frame_Shift_Del	DEL	A	A	-			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	30545854	30545854	A	-	DEL	ABCF1	ENST00000326195	human	ensembl	74_37	+1	known	frame_shift_del	c.218	p.K76fs	1.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCF1	HGNC	ENSG00000204574	tier1			43	0	0.00	16	6	27.27
ABHD15	0	genome.wustl.edu	37	17	27889973	27889973	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	27889973	27889973	C	T	SNP	ABHD15	ENST00000307201	human	ensembl	74_37	-1	known	missense	c.1013	p.R338H	0.003	pirsf_AB-Hydro_YheT	pirsf_AB-Hydro_YheT	-	no_errors	ABHD15	HGNC	ENSG00000168792	tier1	-	-	82	0	0.00	76	4	5.00
ABHD15	0	genome.wustl.edu	37	17	27889973	27889973	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	27889973	27889973	C	T	SNP	ABHD15	ENST00000307201	human	ensembl	74_37	-1	known	missense	c.1013	p.R338H	0.003	pirsf_AB-Hydro_YheT	pirsf_AB-Hydro_YheT	-	no_errors	ABHD15	HGNC	ENSG00000168792	tier1	-	-	89	0	0.00	76	4	5.00
ABHD6	0	genome.wustl.edu	37	3	58279350	58279350	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	58279350	58279350	A	C	SNP	ABHD6	ENST00000295962	human	ensembl	74_37	+1	known	missense	c.872	p.K291T	0.288	pfam_AB_hydrolase_1,pfam_Ndr	pfam_AB_hydrolase_1,pfam_Ndr,prints_AB_hydrolase_1,prints_Epox_hydrolase-like	-	no_errors	ABHD6	HGNC	ENSG00000163686	tier1	-	-	55	0	0.00	18	4	18.18
ACACB	0	genome.wustl.edu	37	12	109684194	109684194	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	109684194	109684194	G	A	SNP	ACACB	ENST00000338432	human	ensembl	74_37	+1	known	missense	c.5512	p.A1838T	0.999	pfam_Carboxyl_trans,pfscan_COA_CT_N	pfam_AcCoA_COase_cen,pfam_Carboxyl_trans,pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_lsu_N,pfam_Biotin_COase_C,pfam_Biotin_lipoyl,superfamily_PreATP-grasp_dom,superfamily_Rudment_hybrid_motif,superfamily_Single_hybrid_motif,smart_Biotin_COase_C,pfscan_ATP-grasp,pfscan_Biotin_carboxylation_dom,pfscan_COA_CT_N,pfscan_COA_CT_C,pfscan_Biotin_lipoyl	-	no_errors	ACACB	HGNC	ENSG00000076555				88	0	0.00	53	4	7.02
ACAD11	0	genome.wustl.edu	37	3	132294705	132294705	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	132294705	132294705	T	C	SNP	ACAD11	ENST00000264990	human	ensembl	74_37	-1	known	missense	c.1912	p.R638G	1.000	pfam_AcylCo_DH/oxidase_C,pfam_Acyl-CoA_DH_2_C,superfamily_AcylCo_DH/oxidase_C	pfam_Aminoglycoside_PTrfase,pfam_AcylCo_DH/oxidase_C,pfam_Acyl-CoA_Oxase/DH_cen-dom,pfam_Acyl-CoA_DH_2_C,pfam_AcylCoA_DH/ox_N,superfamily_AcylCoA_DH/oxidase_NM_dom,superfamily_AcylCo_DH/oxidase_C,superfamily_Kinase-like_dom	-	no_errors	ACAD11	HGNC	ENSG00000240303				63	0	0.00	32	3	8.57
ACAP2	0	genome.wustl.edu	37	3	195063340	195063340	+	Frame_Shift_Del	DEL	C	C	-			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	195063340	195063340	C	-	DEL	ACAP2	ENST00000326793	human	ensembl	74_37	-1	known	frame_shift_del	c.388	p.V130fs	1.000	NULL	pfam_ArfGAP,pfam_Pleckstrin_homology,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	ACAP2	HGNC	ENSG00000114331	tier1			50	0	0.00	47	12	20.34
ACAP2	0	genome.wustl.edu	37	3	195063340	195063340	+	Frame_Shift_Del	DEL	C	C	-			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	195063340	195063340	C	-	DEL	ACAP2	ENST00000326793	human	ensembl	74_37	-1	known	frame_shift_del	c.388	p.V130fs	1.000	NULL	pfam_ArfGAP,pfam_Pleckstrin_homology,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	ACAP2	HGNC	ENSG00000114331	tier1			71	0	0.00	47	12	20.34
ACHE	0	genome.wustl.edu	37	7	100490202	100490202	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	100490202	100490202	G	A	SNP	ACHE	ENST00000302913	human	ensembl	74_37	-1	known	missense	c.1306	p.H436Y	1.000	pfam_CarbesteraseB,prints_Cholinesterase	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Cholinesterase	-	no_errors	ACHE	HGNC	ENSG00000087085	tier1	-	-	107	0	0.00	220	14	5.96
ACHE	0	genome.wustl.edu	37	7	100490202	100490202	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	100490202	100490202	G	A	SNP	ACHE	ENST00000302913	human	ensembl	74_37	-1	known	missense	c.1306	p.H436Y	1.000	pfam_CarbesteraseB,prints_Cholinesterase	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Cholinesterase	-	no_errors	ACHE	HGNC	ENSG00000087085	tier1	-	-	117	0	0.00	220	14	5.96
ACP2	0	genome.wustl.edu	37	11	47269238	47269238	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	47269238	47269238	C	T	SNP	ACP2	ENST00000256997	human	ensembl	74_37	-1	known	missense	c.251	p.R84Q	0.994	pfam_His_Pase_superF_clade-2	pfam_His_Pase_superF_clade-2	-	no_errors	ACP2	HGNC	ENSG00000134575	tier1	-	-	89	0	0.00	60	8	11.76
ACP2	0	genome.wustl.edu	37	11	47269238	47269238	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	47269238	47269238	C	T	SNP	ACP2	ENST00000256997	human	ensembl	74_37	-1	known	missense	c.251	p.R84Q	0.994	pfam_His_Pase_superF_clade-2	pfam_His_Pase_superF_clade-2	-	no_errors	ACP2	HGNC	ENSG00000134575	tier1	-	-	96	0	0.00	60	8	11.76
ACPL2	0	genome.wustl.edu	37	3	141011698	141011698	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	141011698	141011698	A	G	SNP	ACPL2	ENST00000286353	human	ensembl	74_37	+1	known	missense	c.1094	p.E365G	0.014	pfam_His_Pase_superF_clade-2	pfam_His_Pase_superF_clade-2	-	no_errors	ACPL2	HGNC	ENSG00000155893	tier1	-	-	46	0	0.00	29	13	30.95
ACPL2	0	genome.wustl.edu	37	3	141011698	141011698	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	141011698	141011698	A	G	SNP	ACPL2	ENST00000286353	human	ensembl	74_37	+1	known	missense	c.1094	p.E365G	0.014	pfam_His_Pase_superF_clade-2	pfam_His_Pase_superF_clade-2	-	no_errors	ACPL2	HGNC	ENSG00000155893	tier1	-	-	63	0	0.00	29	13	30.95
ACSM2B	0	genome.wustl.edu	37	16	20566633	20566633	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	20566633	20566633	T	G	SNP	ACSM2B	ENST00000329697	human	ensembl	74_37	-1	known	missense	c.554	p.E185A	0.141	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSM2B	HGNC	ENSG00000066813	tier1	-	-	119	0	0.00	72	23	24.21
ACSM2B	0	genome.wustl.edu	37	16	20566633	20566633	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	20566633	20566633	T	G	SNP	ACSM2B	ENST00000329697	human	ensembl	74_37	-1	known	missense	c.554	p.E185A	0.141	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSM2B	HGNC	ENSG00000066813	tier1	-	-	140	0	0.00	72	23	24.21
ACTL7A	0	genome.wustl.edu	37	9	111625588	111625588	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	111625588	111625588	A	T	SNP	ACTL7A	ENST00000333999	human	ensembl	74_37	+1	known	missense	c.986	p.K329M	1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTL7A	HGNC	ENSG00000187003	tier1	-	-	50	0	0.00	38	5	11.63
ACTL7A	0	genome.wustl.edu	37	9	111625588	111625588	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	111625588	111625588	A	T	SNP	ACTL7A	ENST00000333999	human	ensembl	74_37	+1	known	missense	c.986	p.K329M	1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTL7A	HGNC	ENSG00000187003	tier1	-	-	55	0	0.00	38	5	11.63
ACTR3B	0	genome.wustl.edu	37	7	152513671	152513671	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	152513671	152513671	G	T	SNP	ACTR3B	ENST00000256001	human	ensembl	74_37	+1	known	missense	c.538	p.V180L	1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related	-	no_errors	ACTR3B	HGNC	ENSG00000133627	tier1	-	-	104	0	0.00	47	4	7.84
ACTR3B	0	genome.wustl.edu	37	7	152513671	152513671	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	152513671	152513671	G	T	SNP	ACTR3B	ENST00000256001	human	ensembl	74_37	+1	known	missense	c.538	p.V180L	1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related	-	no_errors	ACTR3B	HGNC	ENSG00000133627	tier1	-	-	64	0	0.00	47	4	7.84
ADAM3A	0	genome.wustl.edu	37	8	39362957	39362957	+	RNA	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	39362957	39362957	C	T	SNP	ADAM3A	ENST00000460383	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.024	-	-	-	no_errors	ADAM3A	HGNC	ENSG00000197475	tier1	-	-	119	0	0.00	68	14	17.07
ADAM3A	0	genome.wustl.edu	37	8	39362957	39362957	+	RNA	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	39362957	39362957	C	T	SNP	ADAM3A	ENST00000460383	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.024	-	-	-	no_errors	ADAM3A	HGNC	ENSG00000197475	tier1	-	-	64	0	0.00	68	14	17.07
ADAMTS14	0	genome.wustl.edu	37	10	72517717	72517717	+	Splice_Site	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	72517717	72517717	G	C	SNP	ADAMTS14	ENST00000373208	human	ensembl	74_37	+1	known	splice_site	c.2947-1	e20-1	1.000	-	-	-	no_errors	ADAMTS14	HGNC	ENSG00000138316	tier1	-	-	56	0	0.00	36	4	10.00
ADAMTS14	0	genome.wustl.edu	37	10	72517717	72517717	+	Splice_Site	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	72517717	72517717	G	C	SNP	ADAMTS14	ENST00000373208	human	ensembl	74_37	+1	known	splice_site	c.2947-1	e20-1	1.000	-	-	-	no_errors	ADAMTS14	HGNC	ENSG00000138316	tier1	-	-	58	0	0.00	36	4	10.00
ADAMTS18	0	genome.wustl.edu	37	16	77353779	77353779	+	Silent	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	77353779	77353779	C	T	SNP	ADAMTS18	ENST00000282849	human	ensembl	74_37	-1	known	silent	c.2499	p.A833	0.004	pfam_ADAM_spacer1	pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS18	HGNC	ENSG00000140873	tier1	-	-	82	0	0.00	34	17	33.33
ADAMTS19	0	genome.wustl.edu	37	5	128984537	128984537	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	128984537	128984537	A	G	SNP	ADAMTS19	ENST00000274487	human	ensembl	74_37	+1	known	missense	c.2032	p.R678G	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_PLAC,pfam_Pept_M10_metallopeptidase,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS19	HGNC	ENSG00000145808	tier1	-	-	135	0	0.00	81	6	6.90
ADAMTS19	0	genome.wustl.edu	37	5	128984537	128984537	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	128984537	128984537	A	G	SNP	ADAMTS19	ENST00000274487	human	ensembl	74_37	+1	known	missense	c.2032	p.R678G	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_PLAC,pfam_Pept_M10_metallopeptidase,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS19	HGNC	ENSG00000145808	tier1	-	-	79	0	0.00	81	6	6.90
ADAMTS6	0	genome.wustl.edu	37	5	64447710	64447710	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	64447710	64447710	G	C	SNP	ADAMTS6	ENST00000381055	human	ensembl	74_37	-1	known	missense	c.3307	p.R1103G	1.000	pfam_PLAC,pfscan_PLAC	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,prints_Peptidase_M12B_ADAM-TS,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B	-	no_errors	ADAMTS6	HGNC	ENSG00000049192	tier1	-	-	24	0	0.00	22	5	18.52
ADAMTS6	0	genome.wustl.edu	37	5	64447710	64447710	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	64447710	64447710	G	C	SNP	ADAMTS6	ENST00000381055	human	ensembl	74_37	-1	known	missense	c.3307	p.R1103G	1.000	pfam_PLAC,pfscan_PLAC	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,prints_Peptidase_M12B_ADAM-TS,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B	-	no_errors	ADAMTS6	HGNC	ENSG00000049192	tier1	-	-	52	0	0.00	22	5	18.52
AEBP1	0	genome.wustl.edu	37	7	44147429	44147429	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	44147429	44147429	A	G	SNP	AEBP1	ENST00000223357	human	ensembl	74_37	+1	known	missense	c.761	p.K254R	1.000	NULL	pfam_Peptidase_M14,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_CarboxyPept-like_regulatory,smart_Coagulation_fac_5/8-C_type_dom,smart_Peptidase_M14,pfscan_Coagulation_fac_5/8-C_type_dom,prints_Peptidase_M14	-	no_errors	AEBP1	HGNC	ENSG00000106624	tier1	-	-	109	0	0.00	86	7	7.53
AEBP1	0	genome.wustl.edu	37	7	44147429	44147429	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	44147429	44147429	A	G	SNP	AEBP1	ENST00000223357	human	ensembl	74_37	+1	known	missense	c.761	p.K254R	1.000	NULL	pfam_Peptidase_M14,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_CarboxyPept-like_regulatory,smart_Coagulation_fac_5/8-C_type_dom,smart_Peptidase_M14,pfscan_Coagulation_fac_5/8-C_type_dom,prints_Peptidase_M14	-	no_errors	AEBP1	HGNC	ENSG00000106624	tier1	-	-	97	0	0.00	86	7	7.53
AEN	0	genome.wustl.edu	37	15	89169590	89169590	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	89169590	89169590	G	T	SNP	AEN	ENST00000379231	human	ensembl	74_37	+1	known	missense	c.150	p.Q50H	0.992	NULL	pfam_Exonuclease_RNaseT/DNA_pol3,superfamily_RNaseH-like_dom,smart_Exonuclease	-	no_errors	AEN	HGNC	ENSG00000181026				108	0	0.00	53	4	7.02
AFAP1	0	genome.wustl.edu	37	4	7795508	7795508	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	7795508	7795508	C	T	SNP	AFAP1	ENST00000420658	human	ensembl	74_37	-1	known	missense	c.1312	p.A438T	1.000	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	AFAP1	HGNC	ENSG00000196526	tier1	-	-	68	0	0.00	57	4	6.56
AFAP1	0	genome.wustl.edu	37	4	7795508	7795508	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	7795508	7795508	C	T	SNP	AFAP1	ENST00000420658	human	ensembl	74_37	-1	known	missense	c.1312	p.A438T	1.000	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	AFAP1	HGNC	ENSG00000196526	tier1	-	-	92	0	0.00	57	4	6.56
AFF4	0	genome.wustl.edu	37	5	132223538	132223538	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	132223538	132223538	T	G	SNP	AFF4	ENST00000265343	human	ensembl	74_37	-1	known	missense	c.2933	p.K978T	1.000	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF4	HGNC	ENSG00000072364	tier1	-	-	12	0	0.00	13	5	27.78
AFF4	0	genome.wustl.edu	37	5	132223538	132223538	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	132223538	132223538	T	G	SNP	AFF4	ENST00000265343	human	ensembl	74_37	-1	known	missense	c.2933	p.K978T	1.000	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF4	HGNC	ENSG00000072364	tier1	-	-	23	0	0.00	13	5	27.78
AFTPH	0	genome.wustl.edu	37	2	64796810	64796810	+	Silent	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	64796810	64796810	A	G	SNP	AFTPH	ENST00000422803	human	ensembl	74_37	+1	known	silent	c.2268	p.G756	1.000	NULL	NULL	-	no_errors	AFTPH	HGNC	ENSG00000119844	tier1	-	-	51	0	0.00	62	4	6.06
AFTPH	0	genome.wustl.edu	37	2	64796810	64796810	+	Silent	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	64796810	64796810	A	G	SNP	AFTPH	ENST00000422803	human	ensembl	74_37	+1	known	silent	c.2268	p.G756	1.000	NULL	NULL	-	no_errors	AFTPH	HGNC	ENSG00000119844	tier1	-	-	57	0	0.00	62	4	6.06
AGXT	0	genome.wustl.edu	37	2	241813453	241813453	+	Silent	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	241813453	241813453	G	C	SNP	AGXT	ENST00000307503	human	ensembl	74_37	+1	known	silent	c.654	p.S218	0.001	pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase	pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase	-	no_errors	AGXT	HGNC	ENSG00000172482	tier1	-	-	12	0	0.00	18	5	20.83
AGXT	0	genome.wustl.edu	37	2	241813453	241813453	+	Silent	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	241813453	241813453	G	C	SNP	AGXT	ENST00000307503	human	ensembl	74_37	+1	known	silent	c.654	p.S218	0.001	pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase	pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase	-	no_errors	AGXT	HGNC	ENSG00000172482	tier1	-	-	18	0	0.00	18	5	20.83
AJAP1	0	genome.wustl.edu	37	1	4772429	4772429	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	4772429	4772429	T	G	SNP	AJAP1	ENST00000378190	human	ensembl	74_37	+1	known	missense	c.499	p.F167V	0.613	NULL	NULL	-	no_errors	AJAP1	HGNC	ENSG00000196581	tier1	-	-	83	0	0.00	59	17	22.37
AJAP1	0	genome.wustl.edu	37	1	4772429	4772429	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	4772429	4772429	T	G	SNP	AJAP1	ENST00000378190	human	ensembl	74_37	+1	known	missense	c.499	p.F167V	0.613	NULL	NULL	-	no_errors	AJAP1	HGNC	ENSG00000196581	tier1	-	-	90	0	0.00	59	17	22.37
AKAP3	0	genome.wustl.edu	37	12	4736863	4736863	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	4736863	4736863	T	G	SNP	AKAP3	ENST00000228850	human	ensembl	74_37	-1	known	missense	c.1205	p.E402A	0.889	pfam_AKAP_110_C,smart_AKAP_110	pfam_AKAP_110_C,pfam_RII_binding_1,smart_AKAP_110	-	no_errors	AKAP3	HGNC	ENSG00000111254	tier1	-	-	20	0	0.00	7	5	41.67
AKAP9	0	genome.wustl.edu	37	7	91652182	91652182	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	91652182	91652182	T	A	SNP	AKAP9	ENST00000359028	human	ensembl	74_37	+1	known	missense	c.4043	p.L1348H	0.976	NULL	pfam_PACT_domain,superfamily_Prefoldin,superfamily_YbaB	-	no_errors	AKAP9	HGNC	ENSG00000127914				81	0	0.00	476	30	5.92
AKAP9	0	genome.wustl.edu	37	7	91652183	91652183	+	Silent	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	91652183	91652183	T	A	SNP	AKAP9	ENST00000359028	human	ensembl	74_37	+1	known	silent	c.4044	p.L1348	0.984	NULL	pfam_PACT_domain,superfamily_Prefoldin,superfamily_YbaB	-	no_errors	AKAP9	HGNC	ENSG00000127914				82	0	0.00	482	26	5.11
AKNA	0	genome.wustl.edu	37	9	117104335	117104335	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	117104335	117104335	T	A	SNP	AKNA	ENST00000307564	human	ensembl	74_37	-1	known	missense	c.3828	p.Q1276H	0.000	NULL	pfam_TF_AT-hook	-	no_errors	AKNA	HGNC	ENSG00000106948				67	0	0.00	33	5	13.16
AKR1C4	0	genome.wustl.edu	37	10	5255027	5255027	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	5255027	5255027	A	C	SNP	AKR1C4	ENST00000263126	human	ensembl	74_37	+1	known	missense	c.751	p.T251P	0.465	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_Aldo/keto_reductase_subgr	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_Aldo/keto_reductase_subgr	-	no_errors	AKR1C4	HGNC	ENSG00000198610	tier1	-	-	92	0	0.00	63	5	7.35
ALPK3	0	genome.wustl.edu	37	15	85400659	85400659	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	85400659	85400659	T	C	SNP	ALPK3	ENST00000258888	human	ensembl	74_37	+1	known	missense	c.3296	p.F1099S	0.000	NULL	pfam_MHCK_EF2_kinase,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase,pfscan_Ig-like_dom	-	no_errors	ALPK3	HGNC	ENSG00000136383	tier1	-	-	47	0	0.00	24	12	33.33
ALPK3	0	genome.wustl.edu	37	15	85400659	85400659	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	85400659	85400659	T	C	SNP	ALPK3	ENST00000258888	human	ensembl	74_37	+1	known	missense	c.3296	p.F1099S	0.000	NULL	pfam_MHCK_EF2_kinase,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase,pfscan_Ig-like_dom	-	no_errors	ALPK3	HGNC	ENSG00000136383	tier1	-	-	79	0	0.00	24	12	33.33
AMELX	0	genome.wustl.edu	37	X	11316830	11316830	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	11316830	11316830	G	A	SNP	AMELX	ENST00000380712	human	ensembl	74_37	+1	known	missense	c.349	p.V117I	0.842	pfam_Amelogenin,smart_Amelogenin,prints_Amelogenin	pfam_Amelogenin,smart_Amelogenin,prints_Amelogenin	-	no_errors	AMELX	HGNC	ENSG00000125363	tier1	-	-	26	0	0.00	11	29	72.50
AMELX	0	genome.wustl.edu	37	X	11316830	11316830	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	11316830	11316830	G	A	SNP	AMELX	ENST00000380712	human	ensembl	74_37	+1	known	missense	c.349	p.V117I	0.842	pfam_Amelogenin,smart_Amelogenin,prints_Amelogenin	pfam_Amelogenin,smart_Amelogenin,prints_Amelogenin	-	no_errors	AMELX	HGNC	ENSG00000125363	tier1	-	-	39	0	0.00	11	29	72.50
ANK3	0	genome.wustl.edu	37	10	61830372	61830372	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	61830372	61830372	C	T	SNP	ANK3	ENST00000280772	human	ensembl	74_37	-1	known	missense	c.10267	p.E3423K	1.000	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK3	HGNC	ENSG00000151150				37	0	0.00	34	3	8.11
ANKRD18B	0	genome.wustl.edu	37	9	33566351	33566351	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	33566351	33566351	T	G	SNP	ANKRD18B	ENST00000290943	human	ensembl	74_37	+1	known	missense	c.2409	p.D803E	0.615	NULL	pfam_DUF3496,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD18B	HGNC	ENSG00000230453	tier1	-	-	118	0	0.00	109	40	26.67
ANKRD18B	0	genome.wustl.edu	37	9	33566351	33566351	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	33566351	33566351	T	G	SNP	ANKRD18B	ENST00000290943	human	ensembl	74_37	+1	known	missense	c.2409	p.D803E	0.615	NULL	pfam_DUF3496,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD18B	HGNC	ENSG00000230453	tier1	-	-	228	0	0.00	109	40	26.67
ANKRD19P	0	genome.wustl.edu	37	9	95599088	95599089	+	RNA	DEL	CA	CA	-			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	95599088	95599089	CA	-	DEL	ANKRD19P	ENST00000464387	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.575:0.723	-	-	-	no_errors	ANKRD19P	HGNC	ENSG00000187984	tier1			66	0	0.00	43	4	8.51
ANKRD2	0	genome.wustl.edu	37	10	99341131	99341131	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	99341131	99341131	T	A	SNP	ANKRD2	ENST00000307518	human	ensembl	74_37	+1	known	missense	c.695	p.L232H	0.995	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD2	HGNC	ENSG00000165887	tier1	-	-	43	0	0.00	32	11	25.58
ANKRD2	0	genome.wustl.edu	37	10	99341131	99341131	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	99341131	99341131	T	A	SNP	ANKRD2	ENST00000307518	human	ensembl	74_37	+1	known	missense	c.695	p.L232H	0.995	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD2	HGNC	ENSG00000165887	tier1	-	-	56	0	0.00	32	11	25.58
ANKRD30B	0	genome.wustl.edu	37	18	14760618	14760618	+	Splice_Site	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	18	14760618	14760618	G	T	SNP	ANKRD30B	ENST00000358984	human	ensembl	74_37	+1	known	splice_site	c.820+1	e6+1	0.205	-	-	-	no_errors	ANKRD30B	HGNC	ENSG00000180777	tier1	-	-	81	0	0.00	56	4	6.67
ANKRD33B	0	genome.wustl.edu	37	5	10564869	10564869	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	10564869	10564869	A	C	SNP	ANKRD33B	ENST00000504806	human	ensembl	74_37	+1	known	missense	c.290	p.N97T	1.000	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD33B	HGNC	ENSG00000164236	tier1	-	-	33	0	0.00	9	4	30.77
ANKRD33B	0	genome.wustl.edu	37	5	10564869	10564869	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	10564869	10564869	A	C	SNP	ANKRD33B	ENST00000504806	human	ensembl	74_37	+1	known	missense	c.290	p.N97T	1.000	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD33B	HGNC	ENSG00000164236	tier1	-	-	41	0	0.00	9	4	30.77
ANLN	0	genome.wustl.edu	37	7	36455377	36455377	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	36455377	36455377	G	A	SNP	ANLN	ENST00000265748	human	ensembl	74_37	+1	known	missense	c.1406	p.C469Y	0.068	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	ANLN	HGNC	ENSG00000011426	tier1	-	-	103	0	0.00	62	22	25.88
ANLN	0	genome.wustl.edu	37	7	36455377	36455377	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	36455377	36455377	G	A	SNP	ANLN	ENST00000265748	human	ensembl	74_37	+1	known	missense	c.1406	p.C469Y	0.068	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	ANLN	HGNC	ENSG00000011426	tier1	-	-	79	0	0.00	62	22	25.88
ANO5	0	genome.wustl.edu	37	11	22301155	22301155	+	Silent	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	22301155	22301155	G	T	SNP	ANO5	ENST00000324559	human	ensembl	74_37	+1	known	silent	c.2586	p.V862	0.827	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO5	HGNC	ENSG00000171714	tier1	-	-	60	0	0.00	68	4	5.56
ANO5	0	genome.wustl.edu	37	11	22301155	22301155	+	Silent	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	22301155	22301155	G	T	SNP	ANO5	ENST00000324559	human	ensembl	74_37	+1	known	silent	c.2586	p.V862	0.827	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO5	HGNC	ENSG00000171714	tier1	-	-	80	0	0.00	68	4	5.56
ANO7	0	genome.wustl.edu	37	2	242149948	242149948	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	242149948	242149948	G	T	SNP	ANO7	ENST00000274979	human	ensembl	74_37	+1	known	missense	c.1686	p.K562N	0.046	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO7	HGNC	ENSG00000146205	tier1	-	-	36	0	0.00	23	4	14.81
APBA1	0	genome.wustl.edu	37	9	72131501	72131501	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	72131501	72131501	G	T	SNP	APBA1	ENST00000265381	human	ensembl	74_37	-1	known	missense	c.626	p.A209E	0.959	NULL	pfam_PTB/PI_dom,pfam_PDZ,superfamily_PDZ,smart_PTB/PI_dom,smart_PDZ,pfscan_PDZ,pfscan_PTB/PI_dom	-	no_errors	APBA1	HGNC	ENSG00000107282	tier1	-	-	27	0	0.00	25	4	13.79
APBA1	0	genome.wustl.edu	37	9	72131501	72131501	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	72131501	72131501	G	T	SNP	APBA1	ENST00000265381	human	ensembl	74_37	-1	known	missense	c.626	p.A209E	0.959	NULL	pfam_PTB/PI_dom,pfam_PDZ,superfamily_PDZ,smart_PTB/PI_dom,smart_PDZ,pfscan_PDZ,pfscan_PTB/PI_dom	-	no_errors	APBA1	HGNC	ENSG00000107282	tier1	-	-	33	0	0.00	25	4	13.79
APBB1IP	0	genome.wustl.edu	37	10	26800761	26800761	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	26800761	26800761	A	G	SNP	APBB1IP	ENST00000376236	human	ensembl	74_37	+1	known	missense	c.617	p.N206S	1.000	pfam_Ras-assoc,smart_Ras-assoc,pfscan_Ras-assoc	pfam_Ras-assoc,pfam_Pleckstrin_homology,smart_Ras-assoc,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Ras-assoc	-	no_errors	APBB1IP	HGNC	ENSG00000077420	tier1	-	-	116	0	0.00	51	20	28.17
APBB1IP	0	genome.wustl.edu	37	10	26800761	26800761	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	26800761	26800761	A	G	SNP	APBB1IP	ENST00000376236	human	ensembl	74_37	+1	known	missense	c.617	p.N206S	1.000	pfam_Ras-assoc,smart_Ras-assoc,pfscan_Ras-assoc	pfam_Ras-assoc,pfam_Pleckstrin_homology,smart_Ras-assoc,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Ras-assoc	-	no_errors	APBB1IP	HGNC	ENSG00000077420	tier1	-	-	90	0	0.00	51	20	28.17
APC	0	genome.wustl.edu	37	5	112174004	112174004	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	112174004	112174004	A	C	SNP	APC	ENST00000257430	human	ensembl	74_37	+1	known	missense	c.2713	p.S905R	1.000	NULL	pfam_APC_basic_dom,pfam_EB1-bd,pfam_APC_Cys-rich_rpt,pfam_Armadillo,pfam_APC_dom,pfam_SAMP,pfam_APC_15aa_rpt,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	APC	HGNC	ENSG00000134982	tier1	-	-	25	0	0.00	27	8	22.86
APC	0	genome.wustl.edu	37	5	112174004	112174004	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	112174004	112174004	A	C	SNP	APC	ENST00000257430	human	ensembl	74_37	+1	known	missense	c.2713	p.S905R	1.000	NULL	pfam_APC_basic_dom,pfam_EB1-bd,pfam_APC_Cys-rich_rpt,pfam_Armadillo,pfam_APC_dom,pfam_SAMP,pfam_APC_15aa_rpt,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	APC	HGNC	ENSG00000134982	tier1	-	-	49	0	0.00	27	8	22.86
APP	0	genome.wustl.edu	37	21	27347420	27347420	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	21	27347420	27347420	T	C	SNP	APP	ENST00000346798	human	ensembl	74_37	-1	known	missense	c.1421	p.E474G	1.000	superfamily_Amyloid_glyco_E2_domain	pfam_Amyloid_glyco_heparin-bd,pfam_APP_amyloid_C,pfam_Amyloid_glyco_Abeta,pfam_Prot_inh_Kunz-m,superfamily_Amyloid_glyco_E2_domain,superfamily_Amyloid_glyco_heparin-bd,superfamily_Amyloid_glyco_Cu-bd,superfamily_Prot_inh_Kunz-m,smart_Amyloid_glyco_extra,smart_Prot_inh_Kunz-m,prints_Amyloid_glyco,prints_Amyloid_glyco_Abeta,prints_Prot_inh_Kunz-m,pfscan_Prot_inh_Kunz-m	-	no_errors	APP	HGNC	ENSG00000142192	tier1	-	-	61	0	0.00	43	7	14.00
APP	0	genome.wustl.edu	37	21	27347420	27347420	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	21	27347420	27347420	T	C	SNP	APP	ENST00000346798	human	ensembl	74_37	-1	known	missense	c.1421	p.E474G	1.000	superfamily_Amyloid_glyco_E2_domain	pfam_Amyloid_glyco_heparin-bd,pfam_APP_amyloid_C,pfam_Amyloid_glyco_Abeta,pfam_Prot_inh_Kunz-m,superfamily_Amyloid_glyco_E2_domain,superfamily_Amyloid_glyco_heparin-bd,superfamily_Amyloid_glyco_Cu-bd,superfamily_Prot_inh_Kunz-m,smart_Amyloid_glyco_extra,smart_Prot_inh_Kunz-m,prints_Amyloid_glyco,prints_Amyloid_glyco_Abeta,prints_Prot_inh_Kunz-m,pfscan_Prot_inh_Kunz-m	-	no_errors	APP	HGNC	ENSG00000142192	tier1	-	-	71	0	0.00	43	7	14.00
ARHGAP20	0	genome.wustl.edu	37	11	110485314	110485314	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	110485314	110485314	A	G	SNP	ARHGAP20	ENST00000260283	human	ensembl	74_37	-1	known	missense	c.601	p.F201L	1.000	pfam_Ras-assoc,pfscan_Ras-assoc	pfam_RhoGAP_dom,pfam_Ras-assoc,superfamily_Rho_GTPase_activation_prot,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_Ras-assoc,pfscan_RhoGAP_dom	-	no_errors	ARHGAP20	HGNC	ENSG00000137727	tier1	-	-	103	0	0.00	68	8	10.53
ARHGAP20	0	genome.wustl.edu	37	11	110485314	110485314	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	110485314	110485314	A	G	SNP	ARHGAP20	ENST00000260283	human	ensembl	74_37	-1	known	missense	c.601	p.F201L	1.000	pfam_Ras-assoc,pfscan_Ras-assoc	pfam_RhoGAP_dom,pfam_Ras-assoc,superfamily_Rho_GTPase_activation_prot,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_Ras-assoc,pfscan_RhoGAP_dom	-	no_errors	ARHGAP20	HGNC	ENSG00000137727	tier1	-	-	72	0	0.00	68	8	10.53
ARHGAP23	0	genome.wustl.edu	37	17	36623420	36623420	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	36623420	36623420	G	T	SNP	ARHGAP23	ENST00000431231	human	ensembl	74_37	+1	known	missense	c.1496	p.R499L	1.000	NULL	pfam_RhoGAP_dom,pfam_PDZ,pfam_Pleckstrin_homology,superfamily_Rho_GTPase_activation_prot,superfamily_PDZ,smart_PDZ,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom	-	no_errors	ARHGAP23	HGNC	ENSG00000225485	tier1	-	-	56	0	0.00	46	12	20.69
ARHGAP23	0	genome.wustl.edu	37	17	36623420	36623420	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	36623420	36623420	G	T	SNP	ARHGAP23	ENST00000431231	human	ensembl	74_37	+1	known	missense	c.1496	p.R499L	1.000	NULL	pfam_RhoGAP_dom,pfam_PDZ,pfam_Pleckstrin_homology,superfamily_Rho_GTPase_activation_prot,superfamily_PDZ,smart_PDZ,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom	-	no_errors	ARHGAP23	HGNC	ENSG00000225485	tier1	-	-	72	0	0.00	46	12	20.69
ARHGAP28	0	genome.wustl.edu	37	18	6882152	6882152	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	18	6882152	6882152	T	G	SNP	ARHGAP28	ENST00000400091	human	ensembl	74_37	+1	known	missense	c.1307	p.L436R	1.000	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP28	HGNC	ENSG00000088756	tier1	-	-	115	0	0.00	54	31	36.47
ARHGAP28	0	genome.wustl.edu	37	18	6882152	6882152	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	18	6882152	6882152	T	G	SNP	ARHGAP28	ENST00000400091	human	ensembl	74_37	+1	known	missense	c.1307	p.L436R	1.000	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP28	HGNC	ENSG00000088756	tier1	-	-	55	0	0.00	54	31	36.47
ARHGAP36	0	genome.wustl.edu	37	X	130218356	130218356	+	Silent	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	130218356	130218356	T	A	SNP	ARHGAP36	ENST00000276211	human	ensembl	74_37	+1	known	silent	c.723	p.A241	0.800	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP36	HGNC	ENSG00000147256	tier1	-	-	37	0	0.00	21	26	54.17
ARHGEF38	0	genome.wustl.edu	37	4	106588326	106588326	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	106588326	106588326	T	G	SNP	ARHGEF38	ENST00000420470	human	ensembl	74_37	+1	putative	missense	c.1730	p.L577R	1.000	superfamily_SH3_domain	pfam_DH-domain,pfam_BAR_dom,pfam_SH3_2,pfam_SH3_domain,superfamily_DH-domain,superfamily_SH3_domain,smart_DH-domain,smart_BAR_dom,smart_SH3_domain,pfscan_BAR_dom,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	ARHGEF38	HGNC	ENSG00000236699	tier1	-	-	80	0	0.00	28	4	12.50
ARMCX3	0	genome.wustl.edu	37	X	100880909	100880909	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	100880909	100880909	G	T	SNP	ARMCX3	ENST00000341189	human	ensembl	74_37	+1	known	missense	c.940	p.D314Y	0.994	pfam_ARM-rpt_dom,superfamily_ARM-type_fold	pfam_ARM-rpt_dom,superfamily_ARM-type_fold,pfscan_Armadillo	-	no_errors	ARMCX3	HGNC	ENSG00000102401				53	0	0.00	62	4	6.06
ARMCX4	0	genome.wustl.edu	37	X	100746311	100746311	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	100746311	100746311	T	G	SNP	ARMCX4	ENST00000423738	human	ensembl	74_37	+1	putative	missense	c.2735	p.V912G	0.000	NULL	pfam_ARM-rpt_dom,superfamily_ARM-type_fold,pfscan_Armadillo	-	no_errors	ARMCX4	HGNC	ENSG00000196440	tier1	-	-	52	0	0.00	36	12	25.00
ARMCX4	0	genome.wustl.edu	37	X	100746311	100746311	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	100746311	100746311	T	G	SNP	ARMCX4	ENST00000423738	human	ensembl	74_37	+1	putative	missense	c.2735	p.V912G	0.000	NULL	pfam_ARM-rpt_dom,superfamily_ARM-type_fold,pfscan_Armadillo	-	no_errors	ARMCX4	HGNC	ENSG00000196440	tier1	-	-	67	0	0.00	36	12	25.00
ARMCX4	0	genome.wustl.edu	37	X	100747720	100747720	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	100747720	100747720	G	T	SNP	ARMCX4	ENST00000423738	human	ensembl	74_37	+1	putative	missense	c.4144	p.D1382Y	0.014	NULL	pfam_ARM-rpt_dom,superfamily_ARM-type_fold,pfscan_Armadillo	-	no_errors	ARMCX4	HGNC	ENSG00000196440	tier1	-	-	79	0	0.00	71	4	5.33
ARMCX4	0	genome.wustl.edu	37	X	100747720	100747720	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	100747720	100747720	G	T	SNP	ARMCX4	ENST00000423738	human	ensembl	74_37	+1	putative	missense	c.4144	p.D1382Y	0.014	NULL	pfam_ARM-rpt_dom,superfamily_ARM-type_fold,pfscan_Armadillo	-	no_errors	ARMCX4	HGNC	ENSG00000196440	tier1	-	-	94	0	0.00	71	4	5.33
ARV1	0	genome.wustl.edu	37	1	231124166	231124166	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	231124166	231124166	T	G	SNP	ARV1	ENST00000310256	human	ensembl	74_37	+1	known	missense	c.275	p.L92R	1.000	pfam_Arv1	pfam_Arv1	-	no_errors	ARV1	HGNC	ENSG00000173409	tier1	-	-	36	0	0.00	48	10	17.24
ARV1	0	genome.wustl.edu	37	1	231124166	231124166	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	231124166	231124166	T	G	SNP	ARV1	ENST00000310256	human	ensembl	74_37	+1	known	missense	c.275	p.L92R	1.000	pfam_Arv1	pfam_Arv1	-	no_errors	ARV1	HGNC	ENSG00000173409	tier1	-	-	76	0	0.00	48	10	17.24
ASCC3	0	genome.wustl.edu	37	6	100988137	100988137	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	100988137	100988137	G	T	SNP	ASCC3	ENST00000369162	human	ensembl	74_37	-1	known	missense	c.5677	p.L1893I	1.000	pfam_Sec63-dom,smart_Sec63-dom	pfam_Sec63-dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_AAA+_ATPase,smart_Helicase_C,smart_Sec63-dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ASCC3	HGNC	ENSG00000112249	tier1	-	-	71	0	0.00	61	5	7.58
ASCC3	0	genome.wustl.edu	37	6	100988137	100988137	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	100988137	100988137	G	T	SNP	ASCC3	ENST00000369162	human	ensembl	74_37	-1	known	missense	c.5677	p.L1893I	1.000	pfam_Sec63-dom,smart_Sec63-dom	pfam_Sec63-dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_AAA+_ATPase,smart_Helicase_C,smart_Sec63-dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ASCC3	HGNC	ENSG00000112249	tier1	-	-	80	0	0.00	61	5	7.58
ASH1L	0	genome.wustl.edu	37	1	155448920	155448920	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	155448920	155448920	T	C	SNP	ASH1L	ENST00000368346	human	ensembl	74_37	-1	known	silent	c.3741	p.K1247	1.000	NULL	pfam_SET_dom,pfam_BAH_dom,pfam_Bromodomain,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_AT_hook_DNA-bd_motif,smart_AWS,smart_SET_dom,smart_Bromodomain,smart_Znf_PHD,smart_BAH_dom,pfscan_AWS,pfscan_BAH_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Bromodomain	-	no_errors	ASH1L	HGNC	ENSG00000116539	tier1	-	-	30	0	0.00	13	13	50.00
ASH1L	0	genome.wustl.edu	37	1	155448920	155448920	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	155448920	155448920	T	C	SNP	ASH1L	ENST00000368346	human	ensembl	74_37	-1	known	silent	c.3741	p.K1247	1.000	NULL	pfam_SET_dom,pfam_BAH_dom,pfam_Bromodomain,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_AT_hook_DNA-bd_motif,smart_AWS,smart_SET_dom,smart_Bromodomain,smart_Znf_PHD,smart_BAH_dom,pfscan_AWS,pfscan_BAH_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Bromodomain	-	no_errors	ASH1L	HGNC	ENSG00000116539	tier1	-	-	36	0	0.00	13	13	50.00
ASPA	0	genome.wustl.edu	37	17	3397735	3397735	+	Silent	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	3397735	3397735	C	A	SNP	ASPA	ENST00000263080	human	ensembl	74_37	+1	known	silent	c.726	p.I242	0.031	pfam_Aste_AspA,pirsf_Aspartoacylase	pfam_Aste_AspA,pirsf_Aspartoacylase	-	no_errors	ASPA	HGNC	ENSG00000108381	tier1	-	-	42	0	0.00	32	4	11.11
ASPA	0	genome.wustl.edu	37	17	3397735	3397735	+	Silent	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	3397735	3397735	C	A	SNP	ASPA	ENST00000263080	human	ensembl	74_37	+1	known	silent	c.726	p.I242	0.031	pfam_Aste_AspA,pirsf_Aspartoacylase	pfam_Aste_AspA,pirsf_Aspartoacylase	-	no_errors	ASPA	HGNC	ENSG00000108381	tier1	-	-	45	0	0.00	32	4	11.11
ASPM	0	genome.wustl.edu	37	1	197065138	197065138	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	197065138	197065138	C	T	SNP	ASPM	ENST00000367409	human	ensembl	74_37	-1	known	missense	c.8977	p.E2993K	0.428	superfamily_P-loop_NTPase,superfamily_ARM-type_fold	pfam_IQ_motif_EF-hand-BS,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_CH-domain,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_CH-domain,smart_IQ_motif_EF-hand-BS,pfscan_CH-domain,pfscan_IQ_motif_EF-hand-BS	-	no_errors	ASPM	HGNC	ENSG00000066279	tier1	-	-	30	0	0.00	37	7	15.56
ASPM	0	genome.wustl.edu	37	1	197065138	197065138	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	197065138	197065138	C	T	SNP	ASPM	ENST00000367409	human	ensembl	74_37	-1	known	missense	c.8977	p.E2993K	0.428	superfamily_P-loop_NTPase,superfamily_ARM-type_fold	pfam_IQ_motif_EF-hand-BS,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_CH-domain,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_CH-domain,smart_IQ_motif_EF-hand-BS,pfscan_CH-domain,pfscan_IQ_motif_EF-hand-BS	-	no_errors	ASPM	HGNC	ENSG00000066279	tier1	-	-	47	0	0.00	37	7	15.56
ATAD2	0	genome.wustl.edu	37	8	124333404	124333404	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	124333404	124333404	T	C	SNP	ATAD2	ENST00000287394	human	ensembl	74_37	-1	known	silent	c.4143	p.Q1381	1.000	NULL	pfam_ATPase_AAA_core,pfam_Bromodomain,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_AAA+_ATPase,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	ATAD2	HGNC	ENSG00000156802				62	0	0.00	60	5	7.69
ATM	0	genome.wustl.edu	37	11	108170452	108170452	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	108170452	108170452	A	C	SNP	ATM	ENST00000278616	human	ensembl	74_37	+1	known	missense	c.5017	p.S1673R	1.000	superfamily_ARM-type_fold	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_TAN,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	ATM	HGNC	ENSG00000149311	tier1	-	-	36	0	0.00	54	5	8.33
ATM	0	genome.wustl.edu	37	11	108170452	108170452	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	108170452	108170452	A	C	SNP	ATM	ENST00000278616	human	ensembl	74_37	+1	known	missense	c.5017	p.S1673R	1.000	superfamily_ARM-type_fold	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_TAN,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	ATM	HGNC	ENSG00000149311	tier1	-	-	69	0	0.00	54	5	8.33
ATP12A	0	genome.wustl.edu	37	13	25263409	25263409	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	13	25263409	25263409	G	A	SNP	ATP12A	ENST00000218548	human	ensembl	74_37	+1	known	missense	c.442	p.G148S	1.000	tigrfam_ATPase_P-typ_Na/K_IIC	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP12A	HGNC	ENSG00000075673	tier1	-	-	71	0	0.00	43	8	15.69
ATP12A	0	genome.wustl.edu	37	13	25263409	25263409	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	13	25263409	25263409	G	A	SNP	ATP12A	ENST00000218548	human	ensembl	74_37	+1	known	missense	c.442	p.G148S	1.000	tigrfam_ATPase_P-typ_Na/K_IIC	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP12A	HGNC	ENSG00000075673	tier1	-	-	99	0	0.00	43	8	15.69
ATP6V0A2	0	genome.wustl.edu	37	12	124235717	124235717	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	124235717	124235717	G	C	SNP	ATP6V0A2	ENST00000330342	human	ensembl	74_37	+1	known	missense	c.1996	p.G666R	1.000	pfam_V-ATPase_116kDa_su	pfam_V-ATPase_116kDa_su	-	no_errors	ATP6V0A2	HGNC	ENSG00000185344	tier1	-	-	102	0	0.00	59	11	15.71
ATP6V0A2	0	genome.wustl.edu	37	12	124235717	124235717	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	124235717	124235717	G	C	SNP	ATP6V0A2	ENST00000330342	human	ensembl	74_37	+1	known	missense	c.1996	p.G666R	1.000	pfam_V-ATPase_116kDa_su	pfam_V-ATPase_116kDa_su	-	no_errors	ATP6V0A2	HGNC	ENSG00000185344	tier1	-	-	84	0	0.00	59	11	15.71
ATP8A2	0	genome.wustl.edu	37	13	26144928	26144928	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	13	26144928	26144928	G	T	SNP	ATP8A2	ENST00000381655	human	ensembl	74_37	+1	known	missense	c.1497	p.E499D	1.000	superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8A2	HGNC	ENSG00000132932				44	0	0.00	35	3	7.89
ATRX	0	genome.wustl.edu	37	X	76776325	76776325	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	76776325	76776325	C	T	SNP	ATRX	ENST00000373344	human	ensembl	74_37	-1	known	missense	c.7141	p.E2381K	1.000	NULL	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Znf_FYVE_PHD,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ATRX	HGNC	ENSG00000085224	tier1	-	-	18	0	0.00	21	6	22.22
ATRX	0	genome.wustl.edu	37	X	76776325	76776325	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	76776325	76776325	C	T	SNP	ATRX	ENST00000373344	human	ensembl	74_37	-1	known	missense	c.7141	p.E2381K	1.000	NULL	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Znf_FYVE_PHD,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ATRX	HGNC	ENSG00000085224	tier1	-	-	27	0	0.00	21	6	22.22
AVPR1A	0	genome.wustl.edu	37	12	63544255	63544255	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	63544255	63544255	T	G	SNP	AVPR1A	ENST00000299178	human	ensembl	74_37	-1	known	missense	c.362	p.D121A	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Vasoprsn_rcpt	pfam_GPCR_Rhodpsn,pfam_DUF1856,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Vprs_V1A_rcpt,prints_Vasoprsn_rcpt,prints_GPCR_Rhodpsn	-	no_errors	AVPR1A	HGNC	ENSG00000166148	tier1	-	-	34	0	0.00	28	4	12.50
AVPR1A	0	genome.wustl.edu	37	12	63544255	63544255	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	63544255	63544255	T	G	SNP	AVPR1A	ENST00000299178	human	ensembl	74_37	-1	known	missense	c.362	p.D121A	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Vasoprsn_rcpt	pfam_GPCR_Rhodpsn,pfam_DUF1856,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Vprs_V1A_rcpt,prints_Vasoprsn_rcpt,prints_GPCR_Rhodpsn	-	no_errors	AVPR1A	HGNC	ENSG00000166148	tier1	-	-	35	0	0.00	28	4	12.50
AXDND1	0	genome.wustl.edu	37	1	179380295	179380295	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	179380295	179380295	A	C	SNP	AXDND1	ENST00000367618	human	ensembl	74_37	+1	known	missense	c.1124	p.Y375S	1.000	NULL	pfam_Axonemal_dynein_light_chain	-	no_errors	AXDND1	HGNC	ENSG00000162779	tier1	-	-	143	0	0.00	81	36	30.77
AXDND1	0	genome.wustl.edu	37	1	179380295	179380295	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	179380295	179380295	A	C	SNP	AXDND1	ENST00000367618	human	ensembl	74_37	+1	known	missense	c.1124	p.Y375S	1.000	NULL	pfam_Axonemal_dynein_light_chain	-	no_errors	AXDND1	HGNC	ENSG00000162779	tier1	-	-	94	0	0.00	81	36	30.77
BACH1	0	genome.wustl.edu	37	21	30968833	30968833	+	RNA	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	21	30968833	30968833	T	C	SNP	BACH1	ENST00000462262	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.015	-	-	-	no_errors	BACH1	HGNC	ENSG00000156273	tier1	-	-	37	0	0.00	27	6	18.18
BACH1	0	genome.wustl.edu	37	21	30968833	30968833	+	RNA	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	21	30968833	30968833	T	C	SNP	BACH1	ENST00000462262	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.015	-	-	-	no_errors	BACH1	HGNC	ENSG00000156273	tier1	-	-	53	0	0.00	27	6	18.18
BBC3	0	genome.wustl.edu	37	19	47725010	47725010	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	47725010	47725010	A	G	SNP	BBC3	ENST00000449228	human	ensembl	74_37	-1	known	missense	c.734	p.L245P	0.992	NULL	NULL	-	no_errors	BBC3	HGNC	ENSG00000105327	tier1	-	-	105	0	0.00	58	7	10.61
BCAR1	0	genome.wustl.edu	37	16	75263768	75263768	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	75263768	75263768	C	T	SNP	BCAR1	ENST00000418647	human	ensembl	74_37	-1	known	missense	c.2392	p.E798K	0.999	pfam_CAS_DUF3513	pfam_CAS_DUF3513,pfam_Serine_rich,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	BCAR1	HGNC	ENSG00000050820	tier1	-	-	113	0	0.00	65	17	20.73
BCAR1	0	genome.wustl.edu	37	16	75263768	75263768	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	75263768	75263768	C	T	SNP	BCAR1	ENST00000418647	human	ensembl	74_37	-1	known	missense	c.2392	p.E798K	0.999	pfam_CAS_DUF3513	pfam_CAS_DUF3513,pfam_Serine_rich,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	BCAR1	HGNC	ENSG00000050820	tier1	-	-	121	0	0.00	65	17	20.73
BCAS3	0	genome.wustl.edu	37	17	59152324	59152324	+	Silent	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	59152324	59152324	T	G	SNP	BCAS3	ENST00000390652	human	ensembl	74_37	+1	known	silent	c.2118	p.S706	0.998	pfam_BCAS3	pfam_BCAS3,pfam_WD40_repeat	-	no_errors	BCAS3	HGNC	ENSG00000141376	tier1	-	-	116	0	0.00	84	6	6.67
BCAS3	0	genome.wustl.edu	37	17	59152324	59152324	+	Silent	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	59152324	59152324	T	G	SNP	BCAS3	ENST00000390652	human	ensembl	74_37	+1	known	silent	c.2118	p.S706	0.998	pfam_BCAS3	pfam_BCAS3,pfam_WD40_repeat	-	no_errors	BCAS3	HGNC	ENSG00000141376	tier1	-	-	72	0	0.00	84	6	6.67
BCCIP	0	genome.wustl.edu	37	10	127520054	127520054	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	127520054	127520054	G	C	SNP	BCCIP	ENST00000368759	human	ensembl	74_37	+1	known	missense	c.477	p.K159N	0.536	NULL	NULL	-	no_errors	BCCIP	HGNC	ENSG00000107949				90	0	0.00	74	4	5.13
BCKDHA	0	genome.wustl.edu	37	19	41903735	41903735	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	41903735	41903735	G	T	SNP	BCKDHA	ENST00000269980	human	ensembl	74_37	+1	known	missense	c.3	p.M1I	1.000	NULL	pfam_DH_E1,pfam_Transketolase_N	-	no_errors	BCKDHA	HGNC	ENSG00000248098	tier1	-	-	80	0	0.00	45	10	18.18
BCKDHA	0	genome.wustl.edu	37	19	41903735	41903735	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	41903735	41903735	G	T	SNP	BCKDHA	ENST00000269980	human	ensembl	74_37	+1	known	missense	c.3	p.M1I	1.000	NULL	pfam_DH_E1,pfam_Transketolase_N	-	no_errors	BCKDHA	HGNC	ENSG00000248098	tier1	-	-	97	0	0.00	45	10	18.18
BCL11B	0	genome.wustl.edu	37	14	99640661	99640661	+	Nonsense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	99640661	99640661	T	A	SNP	BCL11B	ENST00000357195	human	ensembl	74_37	-1	known	nonsense	c.2512	p.K838*	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	BCL11B	HGNC	ENSG00000127152	tier1	-	-	29	0	0.00	10	7	41.18
BCL11B	0	genome.wustl.edu	37	14	99640661	99640661	+	Nonsense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	99640661	99640661	T	A	SNP	BCL11B	ENST00000357195	human	ensembl	74_37	-1	known	nonsense	c.2512	p.K838*	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	BCL11B	HGNC	ENSG00000127152	tier1	-	-	38	0	0.00	10	7	41.18
BCLAF1	0	genome.wustl.edu	37	6	136599656	136599656	+	Silent	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	136599656	136599656	A	G	SNP	BCLAF1	ENST00000531224	human	ensembl	74_37	-1	known	silent	c.363	p.S121	1.000	NULL	NULL	-	no_errors	BCLAF1	HGNC	ENSG00000029363	tier1	-	-	110	0	0.00	76	19	20.00
BCLAF1	0	genome.wustl.edu	37	6	136599656	136599656	+	Silent	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	136599656	136599656	A	G	SNP	BCLAF1	ENST00000531224	human	ensembl	74_37	-1	known	silent	c.363	p.S121	1.000	NULL	NULL	-	no_errors	BCLAF1	HGNC	ENSG00000029363	tier1	-	-	95	0	0.00	76	19	20.00
BMP10	0	genome.wustl.edu	37	2	69093425	69093425	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	69093425	69093425	C	A	SNP	BMP10	ENST00000295379	human	ensembl	74_37	-1	known	missense	c.613	p.D205Y	0.798	pfam_TGF-b_N	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C,prints_Inhibin_asu	-	no_errors	BMP10	HGNC	ENSG00000163217	tier1	-	-	59	0	0.00	41	8	16.33
BMP10	0	genome.wustl.edu	37	2	69093425	69093425	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	69093425	69093425	C	A	SNP	BMP10	ENST00000295379	human	ensembl	74_37	-1	known	missense	c.613	p.D205Y	0.798	pfam_TGF-b_N	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C,prints_Inhibin_asu	-	no_errors	BMP10	HGNC	ENSG00000163217	tier1	-	-	67	0	0.00	41	8	16.33
BOD1L1	0	genome.wustl.edu	37	4	13605188	13605188	+	Silent	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	13605188	13605188	T	A	SNP	BOD1L1	ENST00000040738	human	ensembl	74_37	-1	known	silent	c.3336	p.T1112	0.000	NULL	NULL	-	no_errors	BOD1L1	HGNC	ENSG00000038219	tier1	-	-	46	0	0.00	26	12	31.58
BOD1L1	0	genome.wustl.edu	37	4	13605188	13605188	+	Silent	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	13605188	13605188	T	A	SNP	BOD1L1	ENST00000040738	human	ensembl	74_37	-1	known	silent	c.3336	p.T1112	0.000	NULL	NULL	-	no_errors	BOD1L1	HGNC	ENSG00000038219	tier1	-	-	61	0	0.00	26	12	31.58
BOLL	0	genome.wustl.edu	37	2	198650890	198650890	+	RNA	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	198650890	198650890	C	T	SNP	BOLL	ENST00000486206	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.992	-	-	-	no_errors	BOLL	HGNC	ENSG00000152430	tier1	-	-	26	0	0.00	12	4	25.00
BOLL	0	genome.wustl.edu	37	2	198650890	198650890	+	RNA	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	198650890	198650890	C	T	SNP	BOLL	ENST00000486206	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.992	-	-	-	no_errors	BOLL	HGNC	ENSG00000152430	tier1	-	-	40	0	0.00	12	4	25.00
BPIFC	0	genome.wustl.edu	37	22	32841868	32841868	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	22	32841868	32841868	G	C	SNP	BPIFC	ENST00000300399	human	ensembl	74_37	-1	known	missense	c.490	p.Q164E	0.998	pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N	pfam_Lipid-bd_serum_glycop_N,pfam_Lipid-bd_serum_glycop_C,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N,smart_Lipid-bd_serum_glycop_C	-	no_errors	BPIFC	HGNC	ENSG00000184459	tier1	-	-	117	0	0.00	69	37	34.91
BPTF	0	genome.wustl.edu	37	17	65907999	65907999	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	65907999	65907999	G	T	SNP	BPTF	ENST00000321892	human	ensembl	74_37	+1	known	missense	c.4377	p.K1459N	0.000	NULL	pfam_Bromodomain,pfam_DDT_dom,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_DDT_dom_subgr,smart_Znf_PHD,smart_Bromodomain,pfscan_Znf_PHD-finger,pfscan_DDT_dom_superfamily,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BPTF	HGNC	ENSG00000171634				84	0	0.00	46	3	6.12
BRDT	0	genome.wustl.edu	37	1	92447228	92447230	+	In_Frame_Del	DEL	AGC	AGC	-			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	AGC	AGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	92447228	92447230	AGC	-	DEL	BRDT	ENST00000362005	human	ensembl	74_37	+1	known	in_frame_del	c.1918_1920	p.S643in_frame_del	0.989:0.998:1.000	NULL	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRDT	HGNC	ENSG00000137948	tier1			31	0	0.00	25	3	10.71
BTBD11	0	genome.wustl.edu	37	12	107713692	107713692	+	Silent	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	107713692	107713692	G	A	SNP	BTBD11	ENST00000280758	human	ensembl	74_37	+1	known	silent	c.975	p.P325	0.000	superfamily_Histone-fold	pfam_Ankyrin_rpt,pfam_BTB_POZ,superfamily_BTB/POZ_fold,superfamily_Ankyrin_rpt-contain_dom,superfamily_Histone-fold,smart_Ankyrin_rpt,smart_BTB/POZ-like,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_BTB/POZ-like	-	no_errors	BTBD11	HGNC	ENSG00000151136				30	0	0.00	30	3	9.09
BTD	0	genome.wustl.edu	37	3	15643304	15643304	+	RNA	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	15643304	15643304	C	A	SNP	BTD	ENST00000471964	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.002	-	-	-	no_errors	BTD	HGNC	ENSG00000169814	tier1	-	-	90	0	0.00	37	7	15.91
BTD	0	genome.wustl.edu	37	3	15643304	15643304	+	RNA	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	15643304	15643304	C	A	SNP	BTD	ENST00000471964	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.002	-	-	-	no_errors	BTD	HGNC	ENSG00000169814	tier1	-	-	93	0	0.00	37	7	15.91
BZRAP1	0	genome.wustl.edu	37	17	56379792	56379792	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	56379792	56379792	G	T	SNP	BZRAP1	ENST00000355701	human	ensembl	74_37	-1	known	missense	c.5561	p.T1854K	0.000	NULL	pfam_SH3_2,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_SH3_domain	-	no_errors	BZRAP1	HGNC	ENSG00000005379	tier1	-	-	108	0	0.00	72	5	6.49
BZRAP1	0	genome.wustl.edu	37	17	56379792	56379792	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	56379792	56379792	G	T	SNP	BZRAP1	ENST00000355701	human	ensembl	74_37	-1	known	missense	c.5561	p.T1854K	0.000	NULL	pfam_SH3_2,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_SH3_domain	-	no_errors	BZRAP1	HGNC	ENSG00000005379	tier1	-	-	116	0	0.00	72	5	6.49
C15orf54	0	genome.wustl.edu	37	15	39544511	39544511	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	39544511	39544511	A	G	SNP	C15orf54	ENST00000318578	human	ensembl	74_37	+1	known	missense	c.175	p.T59A	0.000	NULL	NULL	-	no_errors	C15orf54	HGNC	ENSG00000175746	tier1	-	-	27	0	0.00	28	4	12.50
C15orf54	0	genome.wustl.edu	37	15	39544511	39544511	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	39544511	39544511	A	G	SNP	C15orf54	ENST00000318578	human	ensembl	74_37	+1	known	missense	c.175	p.T59A	0.000	NULL	NULL	-	no_errors	C15orf54	HGNC	ENSG00000175746	tier1	-	-	37	0	0.00	28	4	12.50
C1orf94	0	genome.wustl.edu	37	1	34663141	34663141	+	Nonsense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	34663141	34663141	T	A	SNP	C1orf94	ENST00000488417	human	ensembl	74_37	+1	known	nonsense	c.636	p.C212*	0.002	NULL	NULL	-	no_errors	C1orf94	HGNC	ENSG00000142698	tier1	-	-	29	0	0.00	16	5	23.81
C1orf94	0	genome.wustl.edu	37	1	34663141	34663141	+	Nonsense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	34663141	34663141	T	A	SNP	C1orf94	ENST00000488417	human	ensembl	74_37	+1	known	nonsense	c.636	p.C212*	0.002	NULL	NULL	-	no_errors	C1orf94	HGNC	ENSG00000142698	tier1	-	-	35	0	0.00	16	5	23.81
C21orf91	0	genome.wustl.edu	37	21	19168961	19168963	+	In_Frame_Del	DEL	TCT	TCT	-			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	TCT	TCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	21	19168961	19168963	TCT	-	DEL	C21orf91	ENST00000284881	human	ensembl	74_37	-1	known	in_frame_del	c.602_600	p.E201in_frame_del	0.946:0.984:0.998	pfam_EURL_prot	pfam_EURL_prot	-	no_errors	C21orf91	HGNC	ENSG00000154642	tier1			35	0	0.00	37	12	24.49
C21orf91	0	genome.wustl.edu	37	21	19168961	19168963	+	In_Frame_Del	DEL	TCT	TCT	-			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	TCT	TCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	21	19168961	19168963	TCT	-	DEL	C21orf91	ENST00000284881	human	ensembl	74_37	-1	known	in_frame_del	c.602_600	p.E201in_frame_del	0.946:0.984:0.998	pfam_EURL_prot	pfam_EURL_prot	-	no_errors	C21orf91	HGNC	ENSG00000154642	tier1			79	0	0.00	37	12	24.49
C2orf61	0	genome.wustl.edu	37	2	47314215	47314215	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	47314215	47314215	G	C	SNP	C2orf61	ENST00000445927	human	ensembl	74_37	-1	known	missense	c.679	p.P227A	0.000	NULL	NULL	-	no_errors	C2orf61	HGNC	ENSG00000239605	tier1	-	-	45	0	0.00	62	8	11.43
C2orf61	0	genome.wustl.edu	37	2	47314215	47314215	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	47314215	47314215	G	C	SNP	C2orf61	ENST00000445927	human	ensembl	74_37	-1	known	missense	c.679	p.P227A	0.000	NULL	NULL	-	no_errors	C2orf61	HGNC	ENSG00000239605	tier1	-	-	70	0	0.00	62	8	11.43
C3P1	0	genome.wustl.edu	37	19	10154379	10154379	+	RNA	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	10154379	10154379	A	G	SNP	C3P1	ENST00000495140	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.022	-	-	-	no_errors	C3P1	HGNC	ENSG00000167798	tier1	-	-	74	0	0.00	49	5	9.26
C3P1	0	genome.wustl.edu	37	19	10154379	10154379	+	RNA	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	10154379	10154379	A	G	SNP	C3P1	ENST00000495140	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.022	-	-	-	no_errors	C3P1	HGNC	ENSG00000167798	tier1	-	-	78	0	0.00	49	5	9.26
C3orf35	0	genome.wustl.edu	37	3	37458154	37458154	+	RNA	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	37458154	37458154	G	C	SNP	C3orf35	ENST00000466204	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	C3orf35	HGNC	ENSG00000198590	tier1	-	-	141	0	0.00	74	6	7.50
C3orf35	0	genome.wustl.edu	37	3	37458154	37458154	+	RNA	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	37458154	37458154	G	C	SNP	C3orf35	ENST00000466204	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	C3orf35	HGNC	ENSG00000198590	tier1	-	-	75	0	0.00	74	6	7.50
C6orf47	0	genome.wustl.edu	37	6	31626855	31626855	+	Silent	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	31626855	31626855	C	G	SNP	C6orf47	ENST00000375911	human	ensembl	74_37	-1	known	silent	c.870	p.P290	0.000	NULL	NULL	-	no_errors	C6orf47	HGNC	ENSG00000204439	tier1	-	-	75	0	0.00	51	8	13.56
C6orf47	0	genome.wustl.edu	37	6	31626855	31626855	+	Silent	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	31626855	31626855	C	G	SNP	C6orf47	ENST00000375911	human	ensembl	74_37	-1	known	silent	c.870	p.P290	0.000	NULL	NULL	-	no_errors	C6orf47	HGNC	ENSG00000204439	tier1	-	-	95	0	0.00	51	8	13.56
C9orf41	0	genome.wustl.edu	37	9	77631322	77631322	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	77631322	77631322	G	T	SNP	C9orf41	ENST00000376834	human	ensembl	74_37	-1	known	missense	c.452	p.S151Y	1.000	pfam_N2227	pfam_N2227	-	no_errors	C9orf41	HGNC	ENSG00000156017	tier1	-	-	66	0	0.00	70	4	5.41
C9orf41	0	genome.wustl.edu	37	9	77631322	77631322	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	77631322	77631322	G	T	SNP	C9orf41	ENST00000376834	human	ensembl	74_37	-1	known	missense	c.452	p.S151Y	1.000	pfam_N2227	pfam_N2227	-	no_errors	C9orf41	HGNC	ENSG00000156017	tier1	-	-	88	0	0.00	70	4	5.41
CABP1	0	genome.wustl.edu	37	12	121104685	121104685	+	Silent	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	121104685	121104685	C	G	SNP	CABP1	ENST00000316803	human	ensembl	74_37	+1	known	silent	c.1095	p.V365	0.985	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CABP1	HGNC	ENSG00000157782	tier1	-	-	78	0	0.00	36	18	33.33
CABP1	0	genome.wustl.edu	37	12	121104685	121104685	+	Silent	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	121104685	121104685	C	G	SNP	CABP1	ENST00000316803	human	ensembl	74_37	+1	known	silent	c.1095	p.V365	0.985	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CABP1	HGNC	ENSG00000157782	tier1	-	-	90	0	0.00	36	18	33.33
CACNA1F	0	genome.wustl.edu	37	X	49088266	49088266	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	49088266	49088266	C	T	SNP	CACNA1F	ENST00000376265	human	ensembl	74_37	-1	known	missense	c.149	p.R50Q	0.927	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_L_a1su	-	no_errors	CACNA1F	HGNC	ENSG00000102001	tier1	-	-	37	0	0.00	24	13	35.14
CACNA1F	0	genome.wustl.edu	37	X	49088266	49088266	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	49088266	49088266	C	T	SNP	CACNA1F	ENST00000376265	human	ensembl	74_37	-1	known	missense	c.149	p.R50Q	0.927	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_L_a1su	-	no_errors	CACNA1F	HGNC	ENSG00000102001	tier1	-	-	51	0	0.00	24	13	35.14
CAMK2B	0	genome.wustl.edu	37	7	44274000	44274000	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	44274000	44274000	G	T	SNP	CAMK2B	ENST00000395749	human	ensembl	74_37	-1	known	missense	c.1120	p.P374T	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ca/CaM-dep_prot_kinase-assoc,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CAMK2B	HGNC	ENSG00000058404	tier1	-	-	112	0	0.00	91	12	11.65
CAMK2B	0	genome.wustl.edu	37	7	44274000	44274000	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	44274000	44274000	G	T	SNP	CAMK2B	ENST00000395749	human	ensembl	74_37	-1	known	missense	c.1120	p.P374T	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ca/CaM-dep_prot_kinase-assoc,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CAMK2B	HGNC	ENSG00000058404	tier1	-	-	99	0	0.00	91	12	11.65
CAPN2	0	genome.wustl.edu	37	1	223949290	223949290	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	223949290	223949290	G	T	SNP	CAPN2	ENST00000295006	human	ensembl	74_37	+1	known	missense	c.1537	p.D513Y	0.997	superfamily_Calpain_domain_III	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,pfscan_EF_hand_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN2	HGNC	ENSG00000162909				75	0	0.00	35	3	7.89
CAPN8	0	genome.wustl.edu	37	1	223816399	223816399	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	223816399	223816399	A	T	SNP	CAPN8	ENST00000366872	human	ensembl	74_37	-1	known	missense	c.391	p.F131I	1.000	pfam_Peptidase_C2_calpain_cat,smart_Peptidase_C2_calpain_cat,pfscan_Peptidase_C2_calpain_cat	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,pfscan_EF_hand_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN8	HGNC	ENSG00000203697	tier1	-	-	114	0	0.00	66	7	9.46
CAPN8	0	genome.wustl.edu	37	1	223816399	223816399	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	223816399	223816399	A	T	SNP	CAPN8	ENST00000366872	human	ensembl	74_37	-1	known	missense	c.391	p.F131I	1.000	pfam_Peptidase_C2_calpain_cat,smart_Peptidase_C2_calpain_cat,pfscan_Peptidase_C2_calpain_cat	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,pfscan_EF_hand_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN8	HGNC	ENSG00000203697	tier1	-	-	80	0	0.00	66	7	9.46
CASP16	0	genome.wustl.edu	37	16	3197439	3197439	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	3197439	3197439	C	A	SNP	CASP16	ENST00000428155	human	ensembl	74_37	+1	known	missense	c.100	p.Q34K	0.001	pfam_Pept_C14_caspase,smart_Pept_C14A_p45_core,pfscan_Pept_C14_ICE_p20	pfam_Pept_C14_caspase,smart_Pept_C14A_p45_core,pfscan_Pept_C14_p10,pfscan_Pept_C14_ICE_p20	-	no_errors	CASP16	HGNC	ENSG00000228146	tier1	-	-	37	0	0.00	10	12	52.17
CASP16	0	genome.wustl.edu	37	16	3197439	3197439	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	3197439	3197439	C	A	SNP	CASP16	ENST00000428155	human	ensembl	74_37	+1	known	missense	c.100	p.Q34K	0.001	pfam_Pept_C14_caspase,smart_Pept_C14A_p45_core,pfscan_Pept_C14_ICE_p20	pfam_Pept_C14_caspase,smart_Pept_C14A_p45_core,pfscan_Pept_C14_p10,pfscan_Pept_C14_ICE_p20	-	no_errors	CASP16	HGNC	ENSG00000228146	tier1	-	-	41	0	0.00	10	12	52.17
CBL	0	genome.wustl.edu	37	11	119146741	119146741	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	119146741	119146741	C	G	SNP	CBL	ENST00000264033	human	ensembl	74_37	+1	known	missense	c.904	p.Q302E	1.000	pfam_Adaptor_Cbl_SH2-like	pfam_Adaptor_Cbl_N_hlx,pfam_Adaptor_Cbl_SH2-like,pfam_Adaptor_Cbl_EF_hand-like,pfam_Znf_C3HC4_RING-type,pfam_UBA/Ts_N,superfamily_Adaptor_Cbl_N_hlx,superfamily_UBA-like,smart_Znf_RING,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Znf_RING	-	no_errors	CBL	HGNC	ENSG00000110395	tier1	-	-	102	0	0.00	62	5	7.46
CBL	0	genome.wustl.edu	37	11	119146741	119146741	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	119146741	119146741	C	G	SNP	CBL	ENST00000264033	human	ensembl	74_37	+1	known	missense	c.904	p.Q302E	1.000	pfam_Adaptor_Cbl_SH2-like	pfam_Adaptor_Cbl_N_hlx,pfam_Adaptor_Cbl_SH2-like,pfam_Adaptor_Cbl_EF_hand-like,pfam_Znf_C3HC4_RING-type,pfam_UBA/Ts_N,superfamily_Adaptor_Cbl_N_hlx,superfamily_UBA-like,smart_Znf_RING,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Znf_RING	-	no_errors	CBL	HGNC	ENSG00000110395	tier1	-	-	64	0	0.00	62	5	7.46
CCDC7	0	genome.wustl.edu	37	10	32833185	32833185	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	32833185	32833185	C	T	SNP	CCDC7	ENST00000277657	human	ensembl	74_37	+1	known	missense	c.1090	p.P364S	0.000	NULL	NULL	-	no_errors	CCDC7	HGNC	ENSG00000216937				40	0	0.00	41	3	6.82
CCDC74B	0	genome.wustl.edu	37	2	130900418	130900418	+	Silent	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	130900418	130900418	G	A	SNP	CCDC74B	ENST00000392984	human	ensembl	74_37	-1	known	silent	c.138	p.S46	0.000	NULL	NULL	-	no_errors	CCDC74B	HGNC	ENSG00000152076	tier1	-	-	84	0	0.00	62	12	16.22
CCDC74B	0	genome.wustl.edu	37	2	130900418	130900418	+	Silent	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	130900418	130900418	G	A	SNP	CCDC74B	ENST00000392984	human	ensembl	74_37	-1	known	silent	c.138	p.S46	0.000	NULL	NULL	-	no_errors	CCDC74B	HGNC	ENSG00000152076	tier1	-	-	94	0	0.00	62	12	16.22
CCDC89	0	genome.wustl.edu	37	11	85396707	85396707	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	85396707	85396707	T	G	SNP	CCDC89	ENST00000316398	human	ensembl	74_37	-1	known	missense	c.467	p.K156T	0.996	NULL	NULL	-	no_errors	CCDC89	HGNC	ENSG00000179071	tier1	-	-	34	0	0.00	23	5	17.86
CCDC89	0	genome.wustl.edu	37	11	85396707	85396707	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	85396707	85396707	T	G	SNP	CCDC89	ENST00000316398	human	ensembl	74_37	-1	known	missense	c.467	p.K156T	0.996	NULL	NULL	-	no_errors	CCDC89	HGNC	ENSG00000179071	tier1	-	-	45	0	0.00	23	5	17.86
CCDC93	0	genome.wustl.edu	37	2	118693100	118693100	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	118693100	118693100	C	A	SNP	CCDC93	ENST00000376300	human	ensembl	74_37	-1	known	missense	c.1699	p.V567L	1.000	NULL	pfam_DUF2037	-	no_errors	CCDC93	HGNC	ENSG00000125633	tier1	-	-	34	0	0.00	26	5	16.13
CCL4L2	0	genome.wustl.edu	37	17	34641385	34641385	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	34641385	34641385	G	T	SNP	CCL4L2	ENST00000394463	human	ensembl	74_37	+1	known	missense	c.245	p.R82M	0.000	smart_Chemokine_IL8-like_dom	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	-	no_errors	CCL4L2	HGNC	ENSG00000197262	tier1	-	-	55	0	0.00	36	4	10.00
CCL4L2	0	genome.wustl.edu	37	17	34641385	34641385	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	34641385	34641385	G	T	SNP	CCL4L2	ENST00000394463	human	ensembl	74_37	+1	known	missense	c.245	p.R82M	0.000	smart_Chemokine_IL8-like_dom	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	-	no_errors	CCL4L2	HGNC	ENSG00000197262	tier1	-	-	57	0	0.00	36	4	10.00
CCNJL	0	genome.wustl.edu	37	5	159682680	159682680	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	159682680	159682680	C	T	SNP	CCNJL	ENST00000393977	human	ensembl	74_37	-1	known	missense	c.763	p.A255T	1.000	pfam_Cyclin_C-dom,superfamily_Cyclin-like,smart_Cyclin-like	pfam_Cyclin_C-dom,pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	CCNJL	HGNC	ENSG00000135083	tier1	-	-	39	0	0.00	14	7	33.33
CD53	0	genome.wustl.edu	37	1	111442367	111442367	+	RNA	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	111442367	111442367	T	A	SNP	CD53	ENST00000497404	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CD53	HGNC	ENSG00000143119	tier1	-	-	55	0	0.00	48	13	21.31
CD53	0	genome.wustl.edu	37	1	111442367	111442367	+	RNA	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	111442367	111442367	T	A	SNP	CD53	ENST00000497404	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CD53	HGNC	ENSG00000143119	tier1	-	-	72	0	0.00	48	13	21.31
CDC42EP4	0	genome.wustl.edu	37	17	71282691	71282691	+	RNA	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	71282691	71282691	G	T	SNP	CDC42EP4	ENST00000581045	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.002	-	-	-	no_errors	CDC42EP4	HGNC	ENSG00000179604	tier1	-	-	49	0	0.00	20	3	13.04
CDC42EP4	0	genome.wustl.edu	37	17	71282691	71282691	+	RNA	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	71282691	71282691	G	T	SNP	CDC42EP4	ENST00000581045	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.002	-	-	-	no_errors	CDC42EP4	HGNC	ENSG00000179604	tier1	-	-	63	0	0.00	20	3	13.04
CDH11	0	genome.wustl.edu	37	16	65005896	65005896	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	65005896	65005896	A	C	SNP	CDH11	ENST00000268603	human	ensembl	74_37	-1	known	missense	c.1462	p.F488V	1.000	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH11	HGNC	ENSG00000140937	tier1	-	-	75	0	0.00	73	7	8.75
CDH11	0	genome.wustl.edu	37	16	65005896	65005896	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	65005896	65005896	A	C	SNP	CDH11	ENST00000268603	human	ensembl	74_37	-1	known	missense	c.1462	p.F488V	1.000	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH11	HGNC	ENSG00000140937	tier1	-	-	82	0	0.00	73	7	8.75
CDK12	0	genome.wustl.edu	37	17	37657541	37657541	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	37657541	37657541	T	A	SNP	CDK12	ENST00000447079	human	ensembl	74_37	+1	known	missense	c.2458	p.L820I	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK12	HGNC	ENSG00000167258	tier1	-	-	104	0	0.00	207	29	12.29
CDK12	0	genome.wustl.edu	37	17	37657541	37657541	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	37657541	37657541	T	A	SNP	CDK12	ENST00000447079	human	ensembl	74_37	+1	known	missense	c.2458	p.L820I	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK12	HGNC	ENSG00000167258	tier1	-	-	125	0	0.00	207	29	12.29
CELSR2	0	genome.wustl.edu	37	1	109813595	109813597	+	In_Frame_Del	DEL	CTG	CTG	-			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	CTG	CTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	109813595	109813597	CTG	-	DEL	CELSR2	ENST00000271332	human	ensembl	74_37	+1	known	in_frame_del	c.7530_7532	p.C2511in_frame_del	1.000:1.000:1.000	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_Cadherin,pfam_DUF3497,pfam_Laminin_G,pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR2	HGNC	ENSG00000143126	tier1			70	0	0.00	27	8	22.86
CELSR2	0	genome.wustl.edu	37	1	109813595	109813597	+	In_Frame_Del	DEL	CTG	CTG	-			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	CTG	CTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	109813595	109813597	CTG	-	DEL	CELSR2	ENST00000271332	human	ensembl	74_37	+1	known	in_frame_del	c.7530_7532	p.C2511in_frame_del	1.000:1.000:1.000	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_Cadherin,pfam_DUF3497,pfam_Laminin_G,pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR2	HGNC	ENSG00000143126	tier1			72	0	0.00	27	8	22.86
CEP170B	0	genome.wustl.edu	37	14	105359959	105359959	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	105359959	105359959	G	T	SNP	CEP170B	ENST00000453495	human	ensembl	74_37	+1	known	nonsense	c.4246	p.E1416*	0.024	NULL	pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	CEP170B	HGNC	ENSG00000099814				110	0	0.00	75	4	5.06
CEP170P1	0	genome.wustl.edu	37	4	119461452	119461452	+	RNA	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	119461452	119461452	A	C	SNP	CEP170P1	ENST00000412784	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CEP170P1	HGNC	ENSG00000154608				128	0	0.00	69	6	8.00
CEP350	0	genome.wustl.edu	37	1	180059910	180059910	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	180059910	180059910	G	C	SNP	CEP350	ENST00000367607	human	ensembl	74_37	+1	known	missense	c.6487	p.E2163Q	1.000	NULL	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,pfscan_CAP-Gly_domain	-	no_errors	CEP350	HGNC	ENSG00000135837	tier1	-	-	143	0	0.00	95	8	7.77
CEP350	0	genome.wustl.edu	37	1	180059910	180059910	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	180059910	180059910	G	C	SNP	CEP350	ENST00000367607	human	ensembl	74_37	+1	known	missense	c.6487	p.E2163Q	1.000	NULL	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,pfscan_CAP-Gly_domain	-	no_errors	CEP350	HGNC	ENSG00000135837	tier1	-	-	95	0	0.00	95	8	7.77
CEP72	0	genome.wustl.edu	37	5	644475	644475	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	644475	644475	T	C	SNP	CEP72	ENST00000264935	human	ensembl	74_37	+1	known	missense	c.1601	p.L534S	0.898	NULL	smart_Leu-rich_rpt_typical-subtyp,smart_U2A'_phosphoprotein32A_C	-	no_errors	CEP72	HGNC	ENSG00000112877				71	0	0.00	56	5	8.20
CEP85	0	genome.wustl.edu	37	1	26603650	26603650	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	26603650	26603650	G	T	SNP	CEP85	ENST00000252992	human	ensembl	74_37	+1	known	missense	c.2155	p.D719Y	0.999	NULL	NULL	-	no_errors	CEP85	HGNC	ENSG00000130695				50	0	0.00	30	2	6.25
CEP85L	0	genome.wustl.edu	37	6	118786715	118786715	+	Silent	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	118786715	118786715	A	C	SNP	CEP85L	ENST00000368488	human	ensembl	74_37	-1	known	silent	c.2280	p.A760	1.000	NULL	NULL	-	no_errors	CEP85L	HGNC	ENSG00000111860	tier1	-	-	42	0	0.00	24	14	36.84
CEP85L	0	genome.wustl.edu	37	6	118786715	118786715	+	Silent	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	118786715	118786715	A	C	SNP	CEP85L	ENST00000368488	human	ensembl	74_37	-1	known	silent	c.2280	p.A760	1.000	NULL	NULL	-	no_errors	CEP85L	HGNC	ENSG00000111860	tier1	-	-	49	0	0.00	24	14	36.84
CFHR3	0	genome.wustl.edu	37	1	196757426	196757426	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	196757426	196757426	A	T	SNP	CFHR3	ENST00000367425	human	ensembl	74_37	+1	known	missense	c.511	p.I171L	0.001	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CFHR3	HGNC	ENSG00000116785				59	0	0.00	63	4	5.97
CFTR	0	genome.wustl.edu	37	7	117305556	117305556	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	117305556	117305556	G	T	SNP	CFTR	ENST00000003084	human	ensembl	74_37	+1	known	missense	c.4180	p.D1394Y	0.661	superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,tigrfam_cAMP_cl_channel	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,prints_CysFib_conduc_TM,tigrfam_cAMP_cl_channel	-	no_errors	CFTR	HGNC	ENSG00000001626	tier1	-	-	24	0	0.00	21	4	16.00
CHAMP1	0	genome.wustl.edu	37	13	115091142	115091142	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	13	115091142	115091142	G	T	SNP	CHAMP1	ENST00000361283	human	ensembl	74_37	+1	known	nonsense	c.1825	p.E609*	0.994	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	CHAMP1	HGNC	ENSG00000198824				61	0	0.00	31	2	6.06
CHAT	0	genome.wustl.edu	37	10	50870765	50870765	+	Silent	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	50870765	50870765	G	T	SNP	CHAT	ENST00000337653	human	ensembl	74_37	+1	known	silent	c.1914	p.L638	0.998	pfam_Carn_acyl_trans	pfam_Carn_acyl_trans	-	no_errors	CHAT	HGNC	ENSG00000070748	tier1	-	-	55	0	0.00	38	4	9.52
CHAT	0	genome.wustl.edu	37	10	50870765	50870765	+	Silent	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	50870765	50870765	G	T	SNP	CHAT	ENST00000337653	human	ensembl	74_37	+1	known	silent	c.1914	p.L638	0.998	pfam_Carn_acyl_trans	pfam_Carn_acyl_trans	-	no_errors	CHAT	HGNC	ENSG00000070748	tier1	-	-	59	0	0.00	38	4	9.52
CHP2	0	genome.wustl.edu	37	16	23768870	23768870	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	23768870	23768870	T	G	SNP	CHP2	ENST00000300113	human	ensembl	74_37	+1	known	missense	c.557	p.V186G	0.986	pfscan_EF_hand_dom	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CHP2	HGNC	ENSG00000166869	tier1	-	-	106	0	0.00	76	22	22.45
CHP2	0	genome.wustl.edu	37	16	23768870	23768870	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	23768870	23768870	T	G	SNP	CHP2	ENST00000300113	human	ensembl	74_37	+1	known	missense	c.557	p.V186G	0.986	pfscan_EF_hand_dom	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CHP2	HGNC	ENSG00000166869	tier1	-	-	95	0	0.00	76	22	22.45
CHSY3	0	genome.wustl.edu	37	5	129520423	129520423	+	Frame_Shift_Del	DEL	A	A	-			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	129520423	129520423	A	-	DEL	CHSY3	ENST00000305031	human	ensembl	74_37	+1	known	frame_shift_del	c.1588	p.N530fs	0.984	pfam_Chond_GalNAc	pfam_Chond_GalNAc,pfam_Fringe-like	-	no_errors	CHSY3	HGNC	ENSG00000198108	tier1			98	0	0.00	46	18	28.12
CLEC2B	0	genome.wustl.edu	37	12	10010204	10010204	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	10010204	10010204	G	T	SNP	CLEC2B	ENST00000228438	human	ensembl	74_37	-1	known	missense	c.106	p.P36T	0.424	pfam_Herpes_UL45-like,superfamily_C-type_lectin_fold,smart_C-type_lectin	pfam_C-type_lectin,pfam_Herpes_UL45-like,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	CLEC2B	HGNC	ENSG00000110852	tier1	-	-	35	0	0.00	56	14	20.00
CLEC2B	0	genome.wustl.edu	37	12	10010204	10010204	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	10010204	10010204	G	T	SNP	CLEC2B	ENST00000228438	human	ensembl	74_37	-1	known	missense	c.106	p.P36T	0.424	pfam_Herpes_UL45-like,superfamily_C-type_lectin_fold,smart_C-type_lectin	pfam_C-type_lectin,pfam_Herpes_UL45-like,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	CLEC2B	HGNC	ENSG00000110852	tier1	-	-	71	0	0.00	56	14	20.00
CLPSL2	0	genome.wustl.edu	37	6	35745305	35745305	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	35745305	35745305	G	T	SNP	CLPSL2	ENST00000360454	human	ensembl	74_37	+1	known	missense	c.154	p.G52C	0.000	NULL	NULL	-	no_errors	CLPSL2	HGNC	ENSG00000196748	tier1	-	-	62	0	0.00	27	19	41.30
CLPSL2	0	genome.wustl.edu	37	6	35745305	35745305	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	35745305	35745305	G	T	SNP	CLPSL2	ENST00000360454	human	ensembl	74_37	+1	known	missense	c.154	p.G52C	0.000	NULL	NULL	-	no_errors	CLPSL2	HGNC	ENSG00000196748	tier1	-	-	63	0	0.00	27	19	41.30
CLSPN	0	genome.wustl.edu	37	1	36230905	36230905	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	36230905	36230905	G	T	SNP	CLSPN	ENST00000318121	human	ensembl	74_37	-1	known	missense	c.47	p.P16Q	0.441	NULL	NULL	-	no_errors	CLSPN	HGNC	ENSG00000092853				82	0	0.00	48	4	7.69
CNDP2	0	genome.wustl.edu	37	18	72178185	72178185	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	18	72178185	72178185	G	T	SNP	CNDP2	ENST00000324262	human	ensembl	74_37	+1	known	missense	c.594	p.W198C	1.000	pfam_Peptidase_M20,pirsf_GSH_degradosome_DUG1	pfam_Peptidase_M20,pfam_Peptidase_M20_dimer,superfamily_Peptidase_M20_dimer,pirsf_GSH_degradosome_DUG1	-	no_errors	CNDP2	HGNC	ENSG00000133313	tier1	-	-	86	0	0.00	63	4	5.97
CNNM2	0	genome.wustl.edu	37	10	104814134	104814134	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	104814134	104814134	A	G	SNP	CNNM2	ENST00000369878	human	ensembl	74_37	+1	known	missense	c.1814	p.D605G	1.000	superfamily_cNMP-bd-like	pfam_DUF21,superfamily_cNMP-bd-like	-	no_errors	CNNM2	HGNC	ENSG00000148842	tier1	-	-	57	0	0.00	44	6	11.76
CNNM2	0	genome.wustl.edu	37	10	104814134	104814134	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	104814134	104814134	A	G	SNP	CNNM2	ENST00000369878	human	ensembl	74_37	+1	known	missense	c.1814	p.D605G	1.000	superfamily_cNMP-bd-like	pfam_DUF21,superfamily_cNMP-bd-like	-	no_errors	CNNM2	HGNC	ENSG00000148842	tier1	-	-	74	0	0.00	44	6	11.76
CNNM4	0	genome.wustl.edu	37	2	97462821	97462821	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	97462821	97462821	G	T	SNP	CNNM4	ENST00000377075	human	ensembl	74_37	+1	known	missense	c.1475	p.G492V	1.000	pfam_CBS_dom	pfam_DUF21,pfam_CBS_dom,superfamily_cNMP-bd-like,pfscan_cNMP-bd_dom	-	no_errors	CNNM4	HGNC	ENSG00000158158				89	0	0.00	61	4	6.15
CNPY1	0	genome.wustl.edu	37	7	155301718	155301718	+	Silent	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	155301718	155301718	C	T	SNP	CNPY1	ENST00000321736	human	ensembl	74_37	-1	putative	silent	c.15	p.K5	0.993	pfam_DUF3456	pfam_DUF3456	-	no_errors	CNPY1	HGNC	ENSG00000146910	tier1	-	-	52	0	0.00	25	26	50.98
CNPY1	0	genome.wustl.edu	37	7	155301718	155301718	+	Silent	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	155301718	155301718	C	T	SNP	CNPY1	ENST00000321736	human	ensembl	74_37	-1	putative	silent	c.15	p.K5	0.993	pfam_DUF3456	pfam_DUF3456	-	no_errors	CNPY1	HGNC	ENSG00000146910	tier1	-	-	81	0	0.00	25	26	50.98
CNTLN	0	genome.wustl.edu	37	9	17309171	17309171	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	17309171	17309171	A	C	SNP	CNTLN	ENST00000380647	human	ensembl	74_37	+1	known	missense	c.1262	p.K421T	1.000	NULL	superfamily_Prefoldin	-	no_errors	CNTLN	HGNC	ENSG00000044459	tier1	-	-	39	0	0.00	27	8	22.86
CNTLN	0	genome.wustl.edu	37	9	17309171	17309171	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	17309171	17309171	A	C	SNP	CNTLN	ENST00000380647	human	ensembl	74_37	+1	known	missense	c.1262	p.K421T	1.000	NULL	superfamily_Prefoldin	-	no_errors	CNTLN	HGNC	ENSG00000044459	tier1	-	-	69	0	0.00	27	8	22.86
CNTN1	0	genome.wustl.edu	37	12	41327555	41327555	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	41327555	41327555	A	T	SNP	CNTN1	ENST00000347616	human	ensembl	74_37	+1	known	missense	c.860	p.E287V	1.000	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN1	HGNC	ENSG00000018236	tier1	-	-	45	0	0.00	53	4	7.02
CNTN1	0	genome.wustl.edu	37	12	41327555	41327555	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	41327555	41327555	A	T	SNP	CNTN1	ENST00000347616	human	ensembl	74_37	+1	known	missense	c.860	p.E287V	1.000	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN1	HGNC	ENSG00000018236	tier1	-	-	46	0	0.00	53	4	7.02
CNTNAP1	0	genome.wustl.edu	37	17	40847736	40847736	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	40847736	40847736	C	G	SNP	CNTNAP1	ENST00000264638	human	ensembl	74_37	+1	known	missense	c.3190	p.R1064G	0.050	superfamily_ConA-like_lec_gl_sf,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP1	HGNC	ENSG00000108797				55	0	0.00	51	3	5.56
CNTNAP2	0	genome.wustl.edu	37	7	147675066	147675066	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	147675066	147675066	C	T	SNP	CNTNAP2	ENST00000361727	human	ensembl	74_37	+1	known	missense	c.2368	p.R790C	1.000	NULL	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,pfam_EG-like_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP2	HGNC	ENSG00000174469	tier1	rs200089329	-	51	0	0.00	29	17	36.96
CNTNAP2	0	genome.wustl.edu	37	7	147675066	147675066	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	147675066	147675066	C	T	SNP	CNTNAP2	ENST00000361727	human	ensembl	74_37	+1	known	missense	c.2368	p.R790C	1.000	NULL	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,pfam_EG-like_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP2	HGNC	ENSG00000174469	tier1	rs200089329	-	69	0	0.00	29	17	36.96
COL14A1	0	genome.wustl.edu	37	8	121301870	121301870	+	Silent	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	121301870	121301870	T	G	SNP	COL14A1	ENST00000297848	human	ensembl	74_37	+1	known	silent	c.4101	p.T1367	0.394	superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	pfam_VWF_A,pfam_Fibronectin_type3,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL14A1	HGNC	ENSG00000187955	tier1	-	-	100	0	0.00	109	8	6.84
COL14A1	0	genome.wustl.edu	37	8	121301870	121301870	+	Silent	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	121301870	121301870	T	G	SNP	COL14A1	ENST00000297848	human	ensembl	74_37	+1	known	silent	c.4101	p.T1367	0.394	superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	pfam_VWF_A,pfam_Fibronectin_type3,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL14A1	HGNC	ENSG00000187955	tier1	-	-	102	0	0.00	109	8	6.84
COL24A1	0	genome.wustl.edu	37	1	86362043	86362043	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	86362043	86362043	G	T	SNP	COL24A1	ENST00000370571	human	ensembl	74_37	-1	known	missense	c.2828	p.A943D	0.850	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL24A1	HGNC	ENSG00000171502	tier1	-	-	101	0	0.00	63	4	5.97
COL24A1	0	genome.wustl.edu	37	1	86362043	86362043	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	86362043	86362043	G	T	SNP	COL24A1	ENST00000370571	human	ensembl	74_37	-1	known	missense	c.2828	p.A943D	0.850	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL24A1	HGNC	ENSG00000171502	tier1	-	-	58	0	0.00	63	4	5.97
COL24A1	0	genome.wustl.edu	37	1	86249802	86249802	+	Silent	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	86249802	86249802	G	T	SNP	COL24A1	ENST00000370571	human	ensembl	74_37	-1	known	silent	c.4215	p.G1405	0.741	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL24A1	HGNC	ENSG00000171502				83	0	0.00	51	3	5.56
COL6A4P1	0	genome.wustl.edu	37	3	15219144	15219144	+	RNA	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	15219144	15219144	T	G	SNP	COL6A4P1	ENST00000446690	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	COL6A4P1	HGNC	ENSG00000230524	tier1	-	-	41	0	0.00	24	4	14.29
COL6A4P1	0	genome.wustl.edu	37	3	15219144	15219144	+	RNA	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	15219144	15219144	T	G	SNP	COL6A4P1	ENST00000446690	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	COL6A4P1	HGNC	ENSG00000230524	tier1	-	-	43	0	0.00	24	4	14.29
COL6A5	0	genome.wustl.edu	37	3	130114047	130114047	+	Silent	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	130114047	130114047	A	C	SNP	COL6A5	ENST00000265379	human	ensembl	74_37	+1	known	silent	c.3307	p.R1103	0.186	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A5	HGNC	ENSG00000172752	tier1	-	-	74	0	0.00	62	9	12.68
COL6A5	0	genome.wustl.edu	37	3	130114047	130114047	+	Silent	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	130114047	130114047	A	C	SNP	COL6A5	ENST00000265379	human	ensembl	74_37	+1	known	silent	c.3307	p.R1103	0.186	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A5	HGNC	ENSG00000172752	tier1	-	-	84	0	0.00	62	9	12.68
COL6A5	0	genome.wustl.edu	37	3	130114055	130114055	+	Silent	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	130114055	130114055	T	A	SNP	COL6A5	ENST00000265379	human	ensembl	74_37	+1	known	silent	c.3315	p.A1105	0.383	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A5	HGNC	ENSG00000172752	tier1	-	-	72	0	0.00	55	11	16.67
COL6A5	0	genome.wustl.edu	37	3	130114055	130114055	+	Silent	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	130114055	130114055	T	A	SNP	COL6A5	ENST00000265379	human	ensembl	74_37	+1	known	silent	c.3315	p.A1105	0.383	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A5	HGNC	ENSG00000172752	tier1	-	-	85	0	0.00	55	11	16.67
COL6A6	0	genome.wustl.edu	37	3	130300658	130300658	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	130300658	130300658	T	A	SNP	COL6A6	ENST00000358511	human	ensembl	74_37	+1	known	missense	c.3801	p.D1267E	0.000	smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A6	HGNC	ENSG00000206384	tier1	-	-	32	0	0.00	37	9	19.57
COL6A6	0	genome.wustl.edu	37	3	130300658	130300658	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	130300658	130300658	T	A	SNP	COL6A6	ENST00000358511	human	ensembl	74_37	+1	known	missense	c.3801	p.D1267E	0.000	smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A6	HGNC	ENSG00000206384	tier1	-	-	51	0	0.00	37	9	19.57
COLQ	0	genome.wustl.edu	37	3	15512148	15512148	+	Silent	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	15512148	15512148	G	A	SNP	COLQ	ENST00000435459	human	ensembl	74_37	-1	known	silent	c.582	p.L194	0.010	NULL	pfam_Collagen,tigrfam_Myxo_disulph_rpt	-	no_errors	COLQ	HGNC	ENSG00000206561	tier1	-	-	137	0	0.00	41	9	18.00
COLQ	0	genome.wustl.edu	37	3	15512148	15512148	+	Silent	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	15512148	15512148	G	A	SNP	COLQ	ENST00000435459	human	ensembl	74_37	-1	known	silent	c.582	p.L194	0.010	NULL	pfam_Collagen,tigrfam_Myxo_disulph_rpt	-	no_errors	COLQ	HGNC	ENSG00000206561	tier1	-	-	80	0	0.00	41	9	18.00
CORO7-PAM16	0	genome.wustl.edu	37	16	4412009	4412009	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	4412009	4412009	C	T	SNP	CORO7-PAM16	ENST00000572467	human	ensembl	74_37	-1	known	missense	c.1555	p.G519R	1.000	NULL	pfam_DUF1900,pfam_WD40_repeat,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	CORO7-PAM16	HGNC	ENSG00000103426	tier1	-	-	49	0	0.00	16	11	40.74
CORO7-PAM16	0	genome.wustl.edu	37	16	4412009	4412009	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	4412009	4412009	C	T	SNP	CORO7-PAM16	ENST00000572467	human	ensembl	74_37	-1	known	missense	c.1555	p.G519R	1.000	NULL	pfam_DUF1900,pfam_WD40_repeat,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	CORO7-PAM16	HGNC	ENSG00000103426	tier1	-	-	59	0	0.00	16	11	40.74
CP	0	genome.wustl.edu	37	3	148897347	148897347	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	148897347	148897347	A	C	SNP	CP	ENST00000264613	human	ensembl	74_37	-1	known	missense	c.2657	p.V886G	1.000	pfam_Cu-oxidase_3,superfamily_Cupredoxin	pfam_Cu-oxidase_2,pfam_Cu-oxidase_3,pfam_Cu-oxidase,superfamily_Cupredoxin	-	no_errors	CP	HGNC	ENSG00000047457	tier1	-	-	58	0	0.00	49	9	15.25
CRIM1	0	genome.wustl.edu	37	2	36706789	36706789	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	36706789	36706789	T	C	SNP	CRIM1	ENST00000280527	human	ensembl	74_37	+1	known	missense	c.1324	p.C442R	1.000	pfam_VWF_C,smart_VWC_out,smart_VWF_C,pfscan_VWF_C	pfam_VWF_C,pfam_Antistasin-like,superfamily_Hirudin/antistatin,smart_IGFBP-like,smart_VWC_out,smart_VWF_C,pfscan_VWF_C	-	no_errors	CRIM1	HGNC	ENSG00000150938				89	0	0.00	73	4	5.19
CRISP3	0	genome.wustl.edu	37	6	49698876	49698876	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	49698876	49698876	T	A	SNP	CRISP3	ENST00000433368	human	ensembl	74_37	-1	known	missense	c.679	p.T227S	1.000	pfam_Cysteine_rich_secretory	pfam_CAP_domain,pfam_Cysteine_rich_secretory,superfamily_CAP_domain,smart_Allrgn_V5/Tpx1,prints_Allrgn_V5/Tpx1	-	no_errors	CRISP3	HGNC	ENSG00000096006				65	0	0.00	42	4	8.70
CRNKL1	0	genome.wustl.edu	37	20	20020401	20020401	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	20	20020401	20020401	T	G	SNP	CRNKL1	ENST00000377340	human	ensembl	74_37	-1	known	missense	c.1880	p.K627T	1.000	smart_HAT	pfam_HAT,pfam_Suf,smart_HAT,pfscan_TPR-contain_dom	-	no_errors	CRNKL1	HGNC	ENSG00000101343	tier1	-	-	115	0	0.00	90	5	5.26
CRNKL1	0	genome.wustl.edu	37	20	20020401	20020401	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	20	20020401	20020401	T	G	SNP	CRNKL1	ENST00000377340	human	ensembl	74_37	-1	known	missense	c.1880	p.K627T	1.000	smart_HAT	pfam_HAT,pfam_Suf,smart_HAT,pfscan_TPR-contain_dom	-	no_errors	CRNKL1	HGNC	ENSG00000101343	tier1	-	-	97	0	0.00	90	5	5.26
CSF1R	0	genome.wustl.edu	37	5	149441411	149441411	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	149441411	149441411	T	G	SNP	CSF1R	ENST00000286301	human	ensembl	74_37	-1	known	missense	c.1628	p.K543T	1.000	pirsf_Tyr_kinase_CSF1/PDGF_rcpt	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	CSF1R	HGNC	ENSG00000182578				49	0	0.00	32	2	5.88
CSGALNACT1	0	genome.wustl.edu	37	8	19362935	19362935	+	Silent	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	19362935	19362935	G	T	SNP	CSGALNACT1	ENST00000311540	human	ensembl	74_37	-1	known	silent	c.411	p.V137	0.987	NULL	pfam_Chond_GalNAc	-	no_errors	CSGALNACT1	HGNC	ENSG00000147408	tier1	-	-	22	0	0.00	3	7	70.00
CSGALNACT1	0	genome.wustl.edu	37	8	19362935	19362935	+	Silent	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	19362935	19362935	G	T	SNP	CSGALNACT1	ENST00000311540	human	ensembl	74_37	-1	known	silent	c.411	p.V137	0.987	NULL	pfam_Chond_GalNAc	-	no_errors	CSGALNACT1	HGNC	ENSG00000147408	tier1	-	-	27	0	0.00	3	7	70.00
CSMD2	0	genome.wustl.edu	37	1	34011676	34011676	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	34011676	34011676	C	G	SNP	CSMD2	ENST00000373381	human	ensembl	74_37	-1	known	missense	c.9061	p.A3021P	0.700	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD2	HGNC	ENSG00000121904	tier1	-	-	45	0	0.00	22	8	26.67
CSMD2	0	genome.wustl.edu	37	1	34011676	34011676	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	34011676	34011676	C	G	SNP	CSMD2	ENST00000373381	human	ensembl	74_37	-1	known	missense	c.9061	p.A3021P	0.700	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD2	HGNC	ENSG00000121904	tier1	-	-	52	0	0.00	22	8	26.67
CSMD3	0	genome.wustl.edu	37	8	113318414	113318414	+	Silent	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	113318414	113318414	G	T	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	silent	c.7893	p.S2631	1.000	superfamily_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796	tier1	-	-	31	0	0.00	47	4	7.84
CSMD3	0	genome.wustl.edu	37	8	113318414	113318414	+	Silent	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	113318414	113318414	G	T	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	silent	c.7893	p.S2631	1.000	superfamily_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796	tier1	-	-	52	0	0.00	47	4	7.84
CSMD3	0	genome.wustl.edu	37	8	114448977	114448977	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	114448977	114448977	T	G	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	missense	c.107	p.K36T	1.000	NULL	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796	tier1	-	-	76	0	0.00	51	9	15.00
CSMD3	0	genome.wustl.edu	37	8	114448977	114448977	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	114448977	114448977	T	G	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	missense	c.107	p.K36T	1.000	NULL	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796	tier1	-	-	78	0	0.00	51	9	15.00
CTBP1-AS2	0	genome.wustl.edu	37	4	1244302	1244302	+	RNA	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	1244302	1244302	G	T	SNP	CTBP1-AS2	ENST00000578730	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	CTBP1-AS2	HGNC	ENSG00000196810	tier1	-	-	61	0	0.00	43	4	8.51
CTBP1-AS2	0	genome.wustl.edu	37	4	1244302	1244302	+	RNA	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	1244302	1244302	G	T	SNP	CTBP1-AS2	ENST00000578730	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	CTBP1-AS2	HGNC	ENSG00000196810	tier1	-	-	79	0	0.00	43	4	8.51
CTBS	0	genome.wustl.edu	37	1	85036366	85036366	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	85036366	85036366	G	T	SNP	CTBS	ENST00000370630	human	ensembl	74_37	-1	known	missense	c.215	p.S72Y	0.927	superfamily_Glycoside_hydrolase_SF,smart_Chitinase_II	pfam_Glyco_hydro18cat,superfamily_Glycoside_hydrolase_SF,smart_Chitinase_II	-	no_errors	CTBS	HGNC	ENSG00000117151				80	0	0.00	36	2	5.26
CTSH	0	genome.wustl.edu	37	15	79221834	79221834	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	79221834	79221834	C	A	SNP	CTSH	ENST00000220166	human	ensembl	74_37	-1	known	missense	c.550	p.G184C	1.000	pfam_Peptidase_C1A_C,smart_Peptidase_C1A_C	pfam_Peptidase_C1A_C,pfam_Prot_inhib_I29,smart_Prot_inhib_I29,smart_Peptidase_C1A_C,prints_Peptidase_C1A_C	-	no_errors	CTSH	HGNC	ENSG00000103811	tier1	-	-	110	0	0.00	42	12	21.82
CTSH	0	genome.wustl.edu	37	15	79221834	79221834	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	79221834	79221834	C	A	SNP	CTSH	ENST00000220166	human	ensembl	74_37	-1	known	missense	c.550	p.G184C	1.000	pfam_Peptidase_C1A_C,smart_Peptidase_C1A_C	pfam_Peptidase_C1A_C,pfam_Prot_inhib_I29,smart_Prot_inhib_I29,smart_Peptidase_C1A_C,prints_Peptidase_C1A_C	-	no_errors	CTSH	HGNC	ENSG00000103811	tier1	-	-	118	0	0.00	42	12	21.82
CUBN	0	genome.wustl.edu	37	10	16970209	16970209	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	16970209	16970209	A	T	SNP	CUBN	ENST00000377833	human	ensembl	74_37	-1	known	missense	c.6218	p.F2073Y	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	CUBN	HGNC	ENSG00000107611	tier1	-	-	76	0	0.00	68	5	6.85
CUBN	0	genome.wustl.edu	37	10	16970209	16970209	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	16970209	16970209	A	T	SNP	CUBN	ENST00000377833	human	ensembl	74_37	-1	known	missense	c.6218	p.F2073Y	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	CUBN	HGNC	ENSG00000107611	tier1	-	-	92	0	0.00	68	5	6.85
CUBN	0	genome.wustl.edu	37	10	17171223	17171223	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	17171223	17171223	T	G	SNP	CUBN	ENST00000377833	human	ensembl	74_37	-1	known	missense	c.149	p.N50T	0.999	NULL	pfam_CUB_dom,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	CUBN	HGNC	ENSG00000107611	tier1	-	-	47	0	0.00	46	15	24.59
CUBN	0	genome.wustl.edu	37	10	17171223	17171223	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	17171223	17171223	T	G	SNP	CUBN	ENST00000377833	human	ensembl	74_37	-1	known	missense	c.149	p.N50T	0.999	NULL	pfam_CUB_dom,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	CUBN	HGNC	ENSG00000107611	tier1	-	-	77	0	0.00	46	15	24.59
CUL9	0	genome.wustl.edu	37	6	43160940	43160940	+	Silent	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	43160940	43160940	G	T	SNP	CUL9	ENST00000252050	human	ensembl	74_37	+1	known	silent	c.2382	p.G794	0.831	superfamily_ARM-type_fold	pfam_Cullin_N,pfam_CPH_domain,pfam_Znf_C6HC,pfam_APC_su10/DOC_dom,superfamily_Galactose-bd-like,superfamily_Cullin_homology,superfamily_ARM-type_fold,superfamily_UBA-like,smart_Cullin_neddylation_domain,smart_Znf_C6HC,pfscan_Znf_RING,pfscan_Cullin_homology	-	no_errors	CUL9	HGNC	ENSG00000112659	tier1	-	-	31	0	0.00	27	4	12.90
CYFIP1	0	genome.wustl.edu	37	15	22945048	22945048	+	Silent	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	22945048	22945048	G	T	SNP	CYFIP1	ENST00000313077	human	ensembl	74_37	+1	known	silent	c.1119	p.T373	0.132	pirsf_Cytoplasmic_FMR1-int_sub	pfam_Cytoplasmic_FMR1-int,pirsf_Cytoplasmic_FMR1-int_sub,prints_Cytoplasmic_FMR1-int	-	no_errors	CYFIP1	HGNC	ENSG00000068793	tier1	-	-	32	0	0.00	21	4	16.00
CYFIP1	0	genome.wustl.edu	37	15	22945048	22945048	+	Silent	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	22945048	22945048	G	T	SNP	CYFIP1	ENST00000313077	human	ensembl	74_37	+1	known	silent	c.1119	p.T373	0.132	pirsf_Cytoplasmic_FMR1-int_sub	pfam_Cytoplasmic_FMR1-int,pirsf_Cytoplasmic_FMR1-int_sub,prints_Cytoplasmic_FMR1-int	-	no_errors	CYFIP1	HGNC	ENSG00000068793	tier1	-	-	45	0	0.00	21	4	16.00
CYP4F22	0	genome.wustl.edu	37	19	15648359	15648359	+	Silent	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	15648359	15648359	G	A	SNP	CYP4F22	ENST00000269703	human	ensembl	74_37	+1	known	silent	c.435	p.L145	1.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_E_grp-II	-	no_errors	CYP4F22	HGNC	ENSG00000171954				67	0	0.00	43	4	8.51
CYP8B1	0	genome.wustl.edu	37	3	42916054	42916054	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	42916054	42916054	A	G	SNP	CYP8B1	ENST00000316161	human	ensembl	74_37	-1	known	missense	c.1255	p.F419L	1.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I	-	no_errors	CYP8B1	HGNC	ENSG00000180432	tier1	-	-	66	0	0.00	53	11	17.19
CYP8B1	0	genome.wustl.edu	37	3	42916054	42916054	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	42916054	42916054	A	G	SNP	CYP8B1	ENST00000316161	human	ensembl	74_37	-1	known	missense	c.1255	p.F419L	1.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I	-	no_errors	CYP8B1	HGNC	ENSG00000180432	tier1	-	-	80	0	0.00	53	11	17.19
DCC	0	genome.wustl.edu	37	18	51025732	51025732	+	Silent	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	18	51025732	51025732	T	A	SNP	DCC	ENST00000442544	human	ensembl	74_37	+1	known	silent	c.3963	p.S1321	0.993	pfam_Neogenin_C	pfam_Neogenin_C,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DCC	HGNC	ENSG00000187323	tier1	-	-	107	0	0.00	34	16	32.00
DCC	0	genome.wustl.edu	37	18	51025732	51025732	+	Silent	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	18	51025732	51025732	T	A	SNP	DCC	ENST00000442544	human	ensembl	74_37	+1	known	silent	c.3963	p.S1321	0.993	pfam_Neogenin_C	pfam_Neogenin_C,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DCC	HGNC	ENSG00000187323	tier1	-	-	125	0	0.00	34	16	32.00
DCDC1	0	genome.wustl.edu	37	11	30915886	30915886	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	30915886	30915886	T	A	SNP	DCDC1	ENST00000406071	human	ensembl	74_37	-1	known	missense	c.1016	p.K339M	0.007	NULL	NULL	-	no_errors	DCDC1	HGNC	ENSG00000170959	tier1	-	-	105	0	0.00	54	14	20.59
DCDC1	0	genome.wustl.edu	37	11	30915886	30915886	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	30915886	30915886	T	A	SNP	DCDC1	ENST00000406071	human	ensembl	74_37	-1	known	missense	c.1016	p.K339M	0.007	NULL	NULL	-	no_errors	DCDC1	HGNC	ENSG00000170959	tier1	-	-	82	0	0.00	54	14	20.59
DCDC1	0	genome.wustl.edu	37	11	30915917	30915917	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	30915917	30915917	C	A	SNP	DCDC1	ENST00000406071	human	ensembl	74_37	-1	known	missense	c.985	p.A329S	0.271	NULL	NULL	-	no_errors	DCDC1	HGNC	ENSG00000170959	tier1	-	-	73	0	0.00	49	10	16.95
DCDC1	0	genome.wustl.edu	37	11	30915917	30915917	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	30915917	30915917	C	A	SNP	DCDC1	ENST00000406071	human	ensembl	74_37	-1	known	missense	c.985	p.A329S	0.271	NULL	NULL	-	no_errors	DCDC1	HGNC	ENSG00000170959	tier1	-	-	87	0	0.00	49	10	16.95
DCSTAMP	0	genome.wustl.edu	37	8	105361786	105361786	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	105361786	105361786	G	A	SNP	DCSTAMP	ENST00000297581	human	ensembl	74_37	+1	known	missense	c.1006	p.V336I	0.993	pfam_DC_STAMP-like,superfamily_ABC1_TM_dom	pfam_DC_STAMP-like,superfamily_ABC1_TM_dom	-	no_errors	DCSTAMP	HGNC	ENSG00000164935	tier1	-	-	69	0	0.00	52	7	11.86
DCSTAMP	0	genome.wustl.edu	37	8	105361786	105361786	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	105361786	105361786	G	A	SNP	DCSTAMP	ENST00000297581	human	ensembl	74_37	+1	known	missense	c.1006	p.V336I	0.993	pfam_DC_STAMP-like,superfamily_ABC1_TM_dom	pfam_DC_STAMP-like,superfamily_ABC1_TM_dom	-	no_errors	DCSTAMP	HGNC	ENSG00000164935	tier1	-	-	95	0	0.00	52	7	11.86
DEFB110	0	genome.wustl.edu	37	6	49986804	49986804	+	Silent	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	49986804	49986804	G	A	SNP	DEFB110	ENST00000371148	human	ensembl	74_37	-1	known	silent	c.90	p.D30	0.654	NULL	NULL	-	no_errors	DEFB110	HGNC	ENSG00000203970	tier1	-	-	49	0	0.00	36	28	43.75
DEFB110	0	genome.wustl.edu	37	6	49986804	49986804	+	Silent	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	49986804	49986804	G	A	SNP	DEFB110	ENST00000371148	human	ensembl	74_37	-1	known	silent	c.90	p.D30	0.654	NULL	NULL	-	no_errors	DEFB110	HGNC	ENSG00000203970	tier1	-	-	71	0	0.00	36	28	43.75
DEFB124	0	genome.wustl.edu	37	20	30053340	30053340	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	20	30053340	30053340	G	A	SNP	DEFB124	ENST00000317676	human	ensembl	74_37	-1	known	missense	c.185	p.P62L	0.066	NULL	NULL	-	no_errors	DEFB124	HGNC	ENSG00000180383	tier1	-	-	74	0	0.00	96	13	11.93
DEFB124	0	genome.wustl.edu	37	20	30053340	30053340	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	20	30053340	30053340	G	A	SNP	DEFB124	ENST00000317676	human	ensembl	74_37	-1	known	missense	c.185	p.P62L	0.066	NULL	NULL	-	no_errors	DEFB124	HGNC	ENSG00000180383	tier1	-	-	98	0	0.00	96	13	11.93
DENND3	0	genome.wustl.edu	37	8	142148124	142148124	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	142148124	142148124	G	T	SNP	DENND3	ENST00000262585	human	ensembl	74_37	+1	known	missense	c.149	p.G50V	0.992	pfam_uDENN_dom,pfscan_uDENN_dom	pfam_DENN_dom,pfam_dDENN_dom,pfam_WD40_repeat,pfam_uDENN_dom,superfamily_WD40_repeat_dom,smart_DENN_dom,smart_dDENN_dom,smart_WD40_repeat,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom,pfscan_WD40_repeat_dom	-	no_errors	DENND3	HGNC	ENSG00000105339	tier1	-	-	79	0	0.00	88	5	5.38
DENND3	0	genome.wustl.edu	37	8	142148124	142148124	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	142148124	142148124	G	T	SNP	DENND3	ENST00000262585	human	ensembl	74_37	+1	known	missense	c.149	p.G50V	0.992	pfam_uDENN_dom,pfscan_uDENN_dom	pfam_DENN_dom,pfam_dDENN_dom,pfam_WD40_repeat,pfam_uDENN_dom,superfamily_WD40_repeat_dom,smart_DENN_dom,smart_dDENN_dom,smart_WD40_repeat,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom,pfscan_WD40_repeat_dom	-	no_errors	DENND3	HGNC	ENSG00000105339	tier1	-	-	93	0	0.00	88	5	5.38
DENND4B	0	genome.wustl.edu	37	1	153913489	153913489	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	153913489	153913489	C	T	SNP	DENND4B	ENST00000361217	human	ensembl	74_37	-1	known	missense	c.1217	p.G406D	1.000	pfam_DENN_dom,smart_DENN_dom,pfscan_DENN_dom	pfam_DENN_dom,pfam_dDENN_dom,pfam_uDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND4B	HGNC	ENSG00000198837	tier1	-	-	29	0	0.00	31	8	20.51
DENND4B	0	genome.wustl.edu	37	1	153913489	153913489	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	153913489	153913489	C	T	SNP	DENND4B	ENST00000361217	human	ensembl	74_37	-1	known	missense	c.1217	p.G406D	1.000	pfam_DENN_dom,smart_DENN_dom,pfscan_DENN_dom	pfam_DENN_dom,pfam_dDENN_dom,pfam_uDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND4B	HGNC	ENSG00000198837	tier1	-	-	45	0	0.00	31	8	20.51
DGKB	0	genome.wustl.edu	37	7	14797303	14797303	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	14797303	14797303	G	A	SNP	DGKB	ENST00000258767	human	ensembl	74_37	-1	known	missense	c.124	p.L42F	1.000	NULL	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_EF_hand_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,pfscan_EF_hand_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DGKB	HGNC	ENSG00000136267	tier1	-	-	150	0	0.00	144	10	6.49
DGKB	0	genome.wustl.edu	37	7	14797303	14797303	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	14797303	14797303	G	A	SNP	DGKB	ENST00000258767	human	ensembl	74_37	-1	known	missense	c.124	p.L42F	1.000	NULL	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_EF_hand_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,pfscan_EF_hand_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DGKB	HGNC	ENSG00000136267	tier1	-	-	99	0	0.00	144	10	6.49
DHX32	0	genome.wustl.edu	37	10	127527584	127527584	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	127527584	127527584	C	A	SNP	DHX32	ENST00000284690	human	ensembl	74_37	-1	known	missense	c.1867	p.G623C	0.999	pfam_DUF1605	pfam_Helicase-assoc_dom,pfam_DUF1605,superfamily_P-loop_NTPase,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd	-	no_errors	DHX32	HGNC	ENSG00000089876				86	0	0.00	47	3	6.00
DIP2B	0	genome.wustl.edu	37	12	51138500	51138500	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	51138500	51138500	G	A	SNP	DIP2B	ENST00000301180	human	ensembl	74_37	+1	known	missense	c.4609	p.V1537M	1.000	NULL	pfam_AMP-dep_Synth/Lig,pfam_DMAP1-bd	-	no_errors	DIP2B	HGNC	ENSG00000066084	tier1	-	-	48	0	0.00	23	13	36.11
DIP2B	0	genome.wustl.edu	37	12	51138500	51138500	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	51138500	51138500	G	A	SNP	DIP2B	ENST00000301180	human	ensembl	74_37	+1	known	missense	c.4609	p.V1537M	1.000	NULL	pfam_AMP-dep_Synth/Lig,pfam_DMAP1-bd	-	no_errors	DIP2B	HGNC	ENSG00000066084	tier1	-	-	53	0	0.00	23	13	36.11
DLD	0	genome.wustl.edu	37	7	107542800	107542800	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	107542800	107542800	G	T	SNP	DLD	ENST00000205402	human	ensembl	74_37	+1	known	missense	c.229	p.G77C	1.000	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_FAD_bind_dom,pfam_GIDA-rel,tigrfam_Lipoamide_DH	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_Pyr_nucl-diS_OxRdtase_dimer,pfam_Pyr_OxRdtase_NAD-bd_dom,pfam_FAD_bind_dom,pfam_GIDA-rel,superfamily_FAD/NAD-linked_Rdtase_dimer,prints_FAD_pyr_nucl-diS_OxRdtase,prints_Hg_reductase,prints_Pyridine_nuc-diS_OxRdtase_2,tigrfam_Lipoamide_DH	-	no_errors	DLD	HGNC	ENSG00000091140	tier1	-	-	69	0	0.00	65	6	8.45
DLGAP1	0	genome.wustl.edu	37	18	3534291	3534291	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	18	3534291	3534291	G	T	SNP	DLGAP1	ENST00000315677	human	ensembl	74_37	-1	known	missense	c.2380	p.H794N	1.000	pfam_GKAP	pfam_GKAP	-	no_errors	DLGAP1	HGNC	ENSG00000170579	tier1	-	-	42	0	0.00	34	4	10.53
DLGAP1	0	genome.wustl.edu	37	18	3534291	3534291	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	18	3534291	3534291	G	T	SNP	DLGAP1	ENST00000315677	human	ensembl	74_37	-1	known	missense	c.2380	p.H794N	1.000	pfam_GKAP	pfam_GKAP	-	no_errors	DLGAP1	HGNC	ENSG00000170579	tier1	-	-	64	0	0.00	34	4	10.53
DMBT1	0	genome.wustl.edu	37	10	124390531	124390531	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	124390531	124390531	G	A	SNP	DMBT1	ENST00000338354	human	ensembl	74_37	+1	known	missense	c.5693	p.R1898H	0.994	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR	pfam_SRCR,pfam_CUB_dom,pfam_ZP_dom,superfamily_Srcr_rcpt-rel,superfamily_CUB_dom,smart_Srcr_rcpt-rel,smart_CUB_dom,smart_ZP_dom,pfscan_CUB_dom,pfscan_SRCR,pfscan_ZP_dom,prints_SRCR	-	no_errors	DMBT1	HGNC	ENSG00000187908	tier1	-	-	127	0	0.00	73	27	27.00
DMBT1	0	genome.wustl.edu	37	10	124390531	124390531	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	124390531	124390531	G	A	SNP	DMBT1	ENST00000338354	human	ensembl	74_37	+1	known	missense	c.5693	p.R1898H	0.994	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR	pfam_SRCR,pfam_CUB_dom,pfam_ZP_dom,superfamily_Srcr_rcpt-rel,superfamily_CUB_dom,smart_Srcr_rcpt-rel,smart_CUB_dom,smart_ZP_dom,pfscan_CUB_dom,pfscan_SRCR,pfscan_ZP_dom,prints_SRCR	-	no_errors	DMBT1	HGNC	ENSG00000187908	tier1	-	-	137	0	0.00	73	27	27.00
DMD	0	genome.wustl.edu	37	X	32328222	32328222	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	32328222	32328222	A	C	SNP	DMD	ENST00000357033	human	ensembl	74_37	-1	known	missense	c.6094	p.F2032V	0.997	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin,pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947	tier1	-	-	28	0	0.00	36	15	29.41
DMD	0	genome.wustl.edu	37	X	32328222	32328222	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	32328222	32328222	A	C	SNP	DMD	ENST00000357033	human	ensembl	74_37	-1	known	missense	c.6094	p.F2032V	0.997	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin,pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947	tier1	-	-	43	0	0.00	36	15	29.41
DMGDH	0	genome.wustl.edu	37	5	78324364	78324364	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	78324364	78324364	G	T	SNP	DMGDH	ENST00000255189	human	ensembl	74_37	-1	known	missense	c.1924	p.Q642K	0.998	pfam_GCV_T_N,pfam_SoxG	pfam_FAD-dep_OxRdtase,pfam_GCV_T_N,pfam_GCV_T_C,pfam_SoxG	-	no_errors	DMGDH	HGNC	ENSG00000132837				72	0	0.00	42	3	6.67
DNAH10	0	genome.wustl.edu	37	12	124350580	124350580	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	124350580	124350580	G	T	SNP	DNAH10	ENST00000409039	human	ensembl	74_37	+1	known	missense	c.6773	p.R2258L	0.017	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_PyrdxlP-dep_Trfase,smart_AAA+_ATPase	-	no_errors	DNAH10	HGNC	ENSG00000197653	tier1	-	-	68	0	0.00	68	4	5.56
DNAH10	0	genome.wustl.edu	37	12	124350580	124350580	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	124350580	124350580	G	T	SNP	DNAH10	ENST00000409039	human	ensembl	74_37	+1	known	missense	c.6773	p.R2258L	0.017	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_PyrdxlP-dep_Trfase,smart_AAA+_ATPase	-	no_errors	DNAH10	HGNC	ENSG00000197653	tier1	-	-	89	0	0.00	68	4	5.56
DNAH10OS	0	genome.wustl.edu	37	12	124418874	124418874	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	124418874	124418874	A	C	SNP	DNAH10OS	ENST00000514254	human	ensembl	74_37	-1	novel	missense	c.257	p.L86R	0.000	NULL	NULL	-	no_errors	DNAH10OS	HGNC	ENSG00000250091	tier1	-	-	47	0	0.00	19	5	20.83
DNAH10OS	0	genome.wustl.edu	37	12	124418874	124418874	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	124418874	124418874	A	C	SNP	DNAH10OS	ENST00000514254	human	ensembl	74_37	-1	novel	missense	c.257	p.L86R	0.000	NULL	NULL	-	no_errors	DNAH10OS	HGNC	ENSG00000250091	tier1	-	-	54	0	0.00	19	5	20.83
DNAH14	0	genome.wustl.edu	37	1	225569205	225569206	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	225569205	225569206	GA	-	DEL	DNAH14	ENST00000430092	human	ensembl	74_37	+1	known	frame_shift_del	c.12695_12696	p.E4233fs	0.995:0.460	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,superfamily_P-loop_NTPase,superfamily_Tautomerase/MIF_sf,smart_AAA+_ATPase	-	no_errors	DNAH14	HGNC	ENSG00000185842	tier1			102	0	0.00	87	12	12.12
DNAH14	0	genome.wustl.edu	37	1	225569205	225569206	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	225569205	225569206	GA	-	DEL	DNAH14	ENST00000430092	human	ensembl	74_37	+1	known	frame_shift_del	c.12695_12696	p.E4233fs	0.995:0.460	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,superfamily_P-loop_NTPase,superfamily_Tautomerase/MIF_sf,smart_AAA+_ATPase	-	no_errors	DNAH14	HGNC	ENSG00000185842	tier1			60	0	0.00	87	12	12.12
DNAH5	0	genome.wustl.edu	37	5	13769199	13769199	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	13769199	13769199	T	G	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	missense	c.9767	p.K3256T	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139	tier1	-	-	39	0	0.00	28	4	12.50
DNAH5	0	genome.wustl.edu	37	5	13769199	13769199	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	13769199	13769199	T	G	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	missense	c.9767	p.K3256T	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139	tier1	-	-	61	0	0.00	28	4	12.50
DNAH7	0	genome.wustl.edu	37	2	196801481	196801481	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	196801481	196801481	T	A	SNP	DNAH7	ENST00000312428	human	ensembl	74_37	-1	known	missense	c.3114	p.R1038S	0.023	pfam_Dynein_heavy_dom-2	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,superfamily_P-loop_NTPase,superfamily_Signal_recog_particle_SRP9/14,smart_AAA+_ATPase,pfscan_EF_hand_dom	-	no_errors	DNAH7	HGNC	ENSG00000118997	tier1	-	-	44	0	0.00	53	9	14.52
DNAH7	0	genome.wustl.edu	37	2	196801481	196801481	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	196801481	196801481	T	A	SNP	DNAH7	ENST00000312428	human	ensembl	74_37	-1	known	missense	c.3114	p.R1038S	0.023	pfam_Dynein_heavy_dom-2	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,superfamily_P-loop_NTPase,superfamily_Signal_recog_particle_SRP9/14,smart_AAA+_ATPase,pfscan_EF_hand_dom	-	no_errors	DNAH7	HGNC	ENSG00000118997	tier1	-	-	59	0	0.00	53	9	14.52
DNAH9	0	genome.wustl.edu	37	17	11511558	11511558	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	11511558	11511558	T	A	SNP	DNAH9	ENST00000262442	human	ensembl	74_37	+1	known	missense	c.530	p.L177H	0.763	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH9	HGNC	ENSG00000007174	tier1	-	-	53	0	0.00	40	10	20.00
DNAH9	0	genome.wustl.edu	37	17	11511558	11511558	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	11511558	11511558	T	A	SNP	DNAH9	ENST00000262442	human	ensembl	74_37	+1	known	missense	c.530	p.L177H	0.763	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH9	HGNC	ENSG00000007174	tier1	-	-	69	0	0.00	40	10	20.00
DNAJC8	0	genome.wustl.edu	37	1	28535044	28535045	+	RNA	INS	-	-	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	28535044	28535045	-	A	INS	DNAJC8	ENST00000470967	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	DNAJC8	HGNC	ENSG00000126698	tier1			15	0	0.00	15	4	21.05
DNER	0	genome.wustl.edu	37	2	230456533	230456535	+	In_Frame_Del	DEL	GCT	GCT	-			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	GCT	GCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	230456533	230456535	GCT	-	DEL	DNER	ENST00000341772	human	ensembl	74_37	-1	known	in_frame_del	c.348_346	p.S116in_frame_del	0.003:0.004:0.006	pfam_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_EGF_extracell,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	DNER	HGNC	ENSG00000187957	tier1			47	0	0.00	35	4	10.26
DOCK3	0	genome.wustl.edu	37	3	51112836	51112836	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	51112836	51112836	T	A	SNP	DOCK3	ENST00000266037	human	ensembl	74_37	+1	known	missense	c.514	p.S172T	1.000	NULL	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK3	HGNC	ENSG00000088538	tier1	-	-	105	0	0.00	57	27	31.76
DOCK3	0	genome.wustl.edu	37	3	51112836	51112836	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	51112836	51112836	T	A	SNP	DOCK3	ENST00000266037	human	ensembl	74_37	+1	known	missense	c.514	p.S172T	1.000	NULL	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK3	HGNC	ENSG00000088538	tier1	-	-	119	0	0.00	57	27	31.76
DOK3	0	genome.wustl.edu	37	5	176936846	176936846	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	176936846	176936846	C	G	SNP	DOK3	ENST00000357198	human	ensembl	74_37	-1	known	missense	c.8	p.R3P	0.296	NULL	pfam_Insln_rcpt_S1,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,pfscan_Insln_rcpt_S1	-	no_errors	DOK3	HGNC	ENSG00000146094	tier1	-	-	12	0	0.00	4	5	55.56
DOLK	0	genome.wustl.edu	37	9	131709253	131709253	+	Silent	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	131709253	131709253	A	G	SNP	DOLK	ENST00000372586	human	ensembl	74_37	-1	known	silent	c.330	p.F110	0.998	NULL	NULL	-	no_errors	DOLK	HGNC	ENSG00000175283	tier1	-	-	83	0	0.00	54	10	15.62
DOLK	0	genome.wustl.edu	37	9	131709253	131709253	+	Silent	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	131709253	131709253	A	G	SNP	DOLK	ENST00000372586	human	ensembl	74_37	-1	known	silent	c.330	p.F110	0.998	NULL	NULL	-	no_errors	DOLK	HGNC	ENSG00000175283	tier1	-	-	98	0	0.00	54	10	15.62
DOLK	0	genome.wustl.edu	37	9	131709261	131709261	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	131709261	131709261	C	G	SNP	DOLK	ENST00000372586	human	ensembl	74_37	-1	known	missense	c.322	p.E108Q	1.000	NULL	NULL	-	no_errors	DOLK	HGNC	ENSG00000175283	tier1	-	-	108	0	0.00	59	9	13.24
DOLK	0	genome.wustl.edu	37	9	131709261	131709261	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	131709261	131709261	C	G	SNP	DOLK	ENST00000372586	human	ensembl	74_37	-1	known	missense	c.322	p.E108Q	1.000	NULL	NULL	-	no_errors	DOLK	HGNC	ENSG00000175283	tier1	-	-	87	0	0.00	59	9	13.24
DPF3	0	genome.wustl.edu	37	14	73137841	73137841	+	RNA	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	73137841	73137841	G	T	SNP	DPF3	ENST00000557704	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	DPF3	HGNC	ENSG00000205683	tier1	-	-	88	0	0.00	65	4	5.80
DPF3	0	genome.wustl.edu	37	14	73137841	73137841	+	RNA	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	73137841	73137841	G	T	SNP	DPF3	ENST00000557704	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	DPF3	HGNC	ENSG00000205683	tier1	-	-	94	0	0.00	65	4	5.80
DPP10	0	genome.wustl.edu	37	2	116510750	116510750	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	116510750	116510750	A	C	SNP	DPP10	ENST00000393147	human	ensembl	74_37	+1	known	missense	c.963	p.R321S	1.000	pfam_Peptidase_S9B	pfam_Peptidase_S9B,pfam_Peptidase_S9	-	no_errors	DPP10	HGNC	ENSG00000175497	tier1	-	-	110	0	0.00	44	47	51.65
DPP10	0	genome.wustl.edu	37	2	116510750	116510750	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	116510750	116510750	A	C	SNP	DPP10	ENST00000393147	human	ensembl	74_37	+1	known	missense	c.963	p.R321S	1.000	pfam_Peptidase_S9B	pfam_Peptidase_S9B,pfam_Peptidase_S9	-	no_errors	DPP10	HGNC	ENSG00000175497	tier1	-	-	84	0	0.00	44	47	51.65
DPP10	0	genome.wustl.edu	37	2	116593762	116593762	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	116593762	116593762	C	G	SNP	DPP10	ENST00000393147	human	ensembl	74_37	+1	known	missense	c.1992	p.I664M	1.000	pfam_Peptidase_S9	pfam_Peptidase_S9B,pfam_Peptidase_S9	-	no_errors	DPP10	HGNC	ENSG00000175497				68	0	0.00	44	3	6.38
DPY19L1	0	genome.wustl.edu	37	7	34994389	34994389	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	34994389	34994389	A	C	SNP	DPY19L1	ENST00000310974	human	ensembl	74_37	-1	known	missense	c.1022	p.V341G	1.000	pfam_Dpy-19	pfam_Dpy-19	-	no_errors	DPY19L1	HGNC	ENSG00000173852	tier1	-	-	102	0	0.00	112	10	8.20
DPY19L1	0	genome.wustl.edu	37	7	34994389	34994389	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	34994389	34994389	A	C	SNP	DPY19L1	ENST00000310974	human	ensembl	74_37	-1	known	missense	c.1022	p.V341G	1.000	pfam_Dpy-19	pfam_Dpy-19	-	no_errors	DPY19L1	HGNC	ENSG00000173852	tier1	-	-	66	0	0.00	112	10	8.20
DPY19L2P1	0	genome.wustl.edu	37	7	35142549	35142549	+	RNA	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	35142549	35142549	A	G	SNP	DPY19L2P1	ENST00000458672	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.990	-	-	-	no_errors	DPY19L2P1	HGNC	ENSG00000189212	tier1	-	-	103	0	0.00	169	10	5.59
DPY19L2P1	0	genome.wustl.edu	37	7	35142549	35142549	+	RNA	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	35142549	35142549	A	G	SNP	DPY19L2P1	ENST00000458672	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.990	-	-	-	no_errors	DPY19L2P1	HGNC	ENSG00000189212	tier1	-	-	145	0	0.00	169	10	5.59
DST	0	genome.wustl.edu	37	6	56437847	56437847	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	56437847	56437847	T	C	SNP	DST	ENST00000370754	human	ensembl	74_37	-1	known	missense	c.13159	p.I4387V	1.000	superfamily_ABC1_TM_dom,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	DST	HGNC	ENSG00000151914	tier1	-	-	34	0	0.00	31	21	40.38
DST	0	genome.wustl.edu	37	6	56437847	56437847	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	56437847	56437847	T	C	SNP	DST	ENST00000370754	human	ensembl	74_37	-1	known	missense	c.13159	p.I4387V	1.000	superfamily_ABC1_TM_dom,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	DST	HGNC	ENSG00000151914	tier1	-	-	39	0	0.00	31	21	40.38
DST	0	genome.wustl.edu	37	6	56507454	56507454	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	56507454	56507454	T	C	SNP	DST	ENST00000446842	human	ensembl	74_37	-1	known	missense	c.133	p.I45V	1.000	NULL	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_GAS2_dom,superfamily_GAS2_dom,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_EF_hand_dom	-	no_errors	DST	HGNC	ENSG00000151914	tier1	-	-	33	0	0.00	53	4	7.02
DST	0	genome.wustl.edu	37	6	56507454	56507454	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	56507454	56507454	T	C	SNP	DST	ENST00000446842	human	ensembl	74_37	-1	known	missense	c.133	p.I45V	1.000	NULL	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_GAS2_dom,superfamily_GAS2_dom,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_EF_hand_dom	-	no_errors	DST	HGNC	ENSG00000151914	tier1	-	-	61	0	0.00	53	4	7.02
DSTYK	0	genome.wustl.edu	37	1	205138757	205138757	+	Silent	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	205138757	205138757	C	A	SNP	DSTYK	ENST00000367162	human	ensembl	74_37	-1	known	silent	c.858	p.S286	0.011	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	DSTYK	HGNC	ENSG00000133059	tier1	-	-	43	0	0.00	63	4	5.97
DSTYK	0	genome.wustl.edu	37	1	205138757	205138757	+	Silent	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	205138757	205138757	C	A	SNP	DSTYK	ENST00000367162	human	ensembl	74_37	-1	known	silent	c.858	p.S286	0.011	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	DSTYK	HGNC	ENSG00000133059	tier1	-	-	72	0	0.00	63	4	5.97
DUOX2	0	genome.wustl.edu	37	15	45396414	45396414	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	45396414	45396414	G	T	SNP	DUOX2	ENST00000389039	human	ensembl	74_37	-1	known	missense	c.2484	p.F828L	1.000	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	pfam_Haem_peroxidase_animal,pfam_Fe_red_NAD-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,pfam_EF_hand_dom,superfamily_Haem_peroxidase,superfamily_Riboflavin_synthase-like_b-brl,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr,prints_Recoverin	-	no_errors	DUOX2	HGNC	ENSG00000140279				111	0	0.00	75	4	5.06
DUSP19	0	genome.wustl.edu	37	2	183960176	183960176	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	183960176	183960176	T	C	SNP	DUSP19	ENST00000354221	human	ensembl	74_37	+1	known	silent	c.444	p.V148	0.994	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_Atypical_DUSP	-	no_errors	DUSP19	HGNC	ENSG00000162999				55	0	0.00	50	4	7.41
DYNC2H1	0	genome.wustl.edu	37	11	103041643	103041643	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	103041643	103041643	T	C	SNP	DYNC2H1	ENST00000398093	human	ensembl	74_37	+1	known	missense	c.5180	p.I1727T	1.000	superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DYNC2H1	HGNC	ENSG00000187240	tier1	-	-	58	0	0.00	44	9	16.98
DYNC2H1	0	genome.wustl.edu	37	11	103041643	103041643	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	103041643	103041643	T	C	SNP	DYNC2H1	ENST00000398093	human	ensembl	74_37	+1	known	missense	c.5180	p.I1727T	1.000	superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DYNC2H1	HGNC	ENSG00000187240	tier1	-	-	97	0	0.00	44	9	16.98
DYNC2H1	0	genome.wustl.edu	37	11	103044834	103044834	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	103044834	103044834	A	C	SNP	DYNC2H1	ENST00000398093	human	ensembl	74_37	+1	known	missense	c.5609	p.K1870T	1.000	superfamily_P-loop_NTPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DYNC2H1	HGNC	ENSG00000187240	tier1	-	-	105	0	0.00	75	20	21.05
DYNC2H1	0	genome.wustl.edu	37	11	103044834	103044834	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	103044834	103044834	A	C	SNP	DYNC2H1	ENST00000398093	human	ensembl	74_37	+1	known	missense	c.5609	p.K1870T	1.000	superfamily_P-loop_NTPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DYNC2H1	HGNC	ENSG00000187240	tier1	-	-	88	0	0.00	75	20	21.05
DYNC2H1	0	genome.wustl.edu	37	11	103092848	103092848	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	103092848	103092848	T	G	SNP	DYNC2H1	ENST00000398093	human	ensembl	74_37	+1	known	missense	c.9197	p.L3066R	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DYNC2H1	HGNC	ENSG00000187240	tier1	-	-	163	0	0.00	83	29	25.89
DYNC2H1	0	genome.wustl.edu	37	11	103092848	103092848	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	103092848	103092848	T	G	SNP	DYNC2H1	ENST00000398093	human	ensembl	74_37	+1	known	missense	c.9197	p.L3066R	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DYNC2H1	HGNC	ENSG00000187240	tier1	-	-	96	0	0.00	83	29	25.89
ECE2	0	genome.wustl.edu	37	3	183976133	183976133	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	183976133	183976133	C	A	SNP	ECE2	ENST00000324557	human	ensembl	74_37	+1	known	missense	c.538	p.H180N	1.000	NULL	pfam_Methyltransf_11,pfam_Methyltransf_12	-	no_errors	ECE2	HGNC	ENSG00000145194				95	0	0.00	53	3	5.36
EDNRA	0	genome.wustl.edu	37	4	148406992	148406992	+	Silent	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	148406992	148406992	A	G	SNP	EDNRA	ENST00000324300	human	ensembl	74_37	+1	known	silent	c.159	p.Q53	0.299	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_ETA_rcpt,prints_Endthln_rcpt,prints_GPCR_Rhodpsn	-	no_errors	EDNRA	HGNC	ENSG00000151617	tier1	-	-	113	0	0.00	37	15	28.85
EDNRA	0	genome.wustl.edu	37	4	148406992	148406992	+	Silent	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	148406992	148406992	A	G	SNP	EDNRA	ENST00000324300	human	ensembl	74_37	+1	known	silent	c.159	p.Q53	0.299	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_ETA_rcpt,prints_Endthln_rcpt,prints_GPCR_Rhodpsn	-	no_errors	EDNRA	HGNC	ENSG00000151617	tier1	-	-	68	0	0.00	37	15	28.85
EDNRA	0	genome.wustl.edu	37	4	148464965	148464965	+	RNA	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	148464965	148464965	G	T	SNP	EDNRA	ENST00000503721	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	EDNRA	HGNC	ENSG00000151617	tier1	-	-	53	0	0.00	43	13	23.21
EDNRA	0	genome.wustl.edu	37	4	148464965	148464965	+	RNA	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	148464965	148464965	G	T	SNP	EDNRA	ENST00000503721	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	EDNRA	HGNC	ENSG00000151617	tier1	-	-	78	0	0.00	43	13	23.21
EFR3B	0	genome.wustl.edu	37	2	25367891	25367891	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	25367891	25367891	G	C	SNP	EFR3B	ENST00000403714	human	ensembl	74_37	+1	known	missense	c.2113	p.E705Q	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	EFR3B	HGNC	ENSG00000084710	tier1	-	-	55	0	0.00	59	8	11.94
EFR3B	0	genome.wustl.edu	37	2	25367891	25367891	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	25367891	25367891	G	C	SNP	EFR3B	ENST00000403714	human	ensembl	74_37	+1	known	missense	c.2113	p.E705Q	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	EFR3B	HGNC	ENSG00000084710	tier1	-	-	92	0	0.00	59	8	11.94
EFR3B	0	genome.wustl.edu	37	2	25377167	25377167	+	Silent	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	25377167	25377167	C	T	SNP	EFR3B	ENST00000403714	human	ensembl	74_37	+1	known	silent	c.2412	p.I804	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	EFR3B	HGNC	ENSG00000084710	tier1	-	-	105	0	0.00	53	11	17.19
EFR3B	0	genome.wustl.edu	37	2	25377167	25377167	+	Silent	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	25377167	25377167	C	T	SNP	EFR3B	ENST00000403714	human	ensembl	74_37	+1	known	silent	c.2412	p.I804	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	EFR3B	HGNC	ENSG00000084710	tier1	-	-	63	0	0.00	53	11	17.19
EHD4	0	genome.wustl.edu	37	15	42264525	42264525	+	Silent	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	42264525	42264525	G	A	SNP	EHD4	ENST00000220325	human	ensembl	74_37	-1	known	silent	c.168	p.A56	0.993	superfamily_P-loop_NTPase	pfam_Dynamin_GTPase,superfamily_P-loop_NTPase,smart_EPS15_homology,pfscan_EF_hand_dom,pfscan_EPS15_homology	-	no_errors	EHD4	HGNC	ENSG00000103966	tier1	-	-	109	0	0.00	54	8	12.90
EHD4	0	genome.wustl.edu	37	15	42264525	42264525	+	Silent	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	42264525	42264525	G	A	SNP	EHD4	ENST00000220325	human	ensembl	74_37	-1	known	silent	c.168	p.A56	0.993	superfamily_P-loop_NTPase	pfam_Dynamin_GTPase,superfamily_P-loop_NTPase,smart_EPS15_homology,pfscan_EF_hand_dom,pfscan_EPS15_homology	-	no_errors	EHD4	HGNC	ENSG00000103966	tier1	-	-	117	0	0.00	54	8	12.90
EIF3B	0	genome.wustl.edu	37	7	2418336	2418336	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	2418336	2418336	G	T	SNP	EIF3B	ENST00000360876	human	ensembl	74_37	+1	known	missense	c.2167	p.D723Y	1.000	pirsf_EIF3B	pfam_TIF_beta_prop-like,pfam_RRM_dom,smart_RRM_dom,pirsf_EIF3B,pfscan_RRM_dom	-	no_errors	EIF3B	HGNC	ENSG00000106263				69	0	0.00	61	4	6.15
EIF6	0	genome.wustl.edu	37	20	33867427	33867427	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	20	33867427	33867427	G	T	SNP	EIF6	ENST00000374436	human	ensembl	74_37	-1	known	missense	c.670	p.L224M	1.000	pirsf_eIF6,tigrfam_eIF6	pfam_eIF6,smart_eIF6,pirsf_eIF6,tigrfam_eIF6	-	no_errors	EIF6	HGNC	ENSG00000242372	tier1	-	-	57	0	0.00	51	4	7.14
EIF6	0	genome.wustl.edu	37	20	33867427	33867427	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	20	33867427	33867427	G	T	SNP	EIF6	ENST00000374436	human	ensembl	74_37	-1	known	missense	c.670	p.L224M	1.000	pirsf_eIF6,tigrfam_eIF6	pfam_eIF6,smart_eIF6,pirsf_eIF6,tigrfam_eIF6	-	no_errors	EIF6	HGNC	ENSG00000242372	tier1	-	-	59	0	0.00	51	4	7.14
ELK1	0	genome.wustl.edu	37	X	47498581	47498581	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	47498581	47498581	G	A	SNP	ELK1	ENST00000247161	human	ensembl	74_37	-1	known	missense	c.367	p.P123S	0.014	NULL	pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	ELK1	HGNC	ENSG00000126767	tier1	-	-	56	0	0.00	54	7	11.48
ELK1	0	genome.wustl.edu	37	X	47498581	47498581	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	47498581	47498581	G	A	SNP	ELK1	ENST00000247161	human	ensembl	74_37	-1	known	missense	c.367	p.P123S	0.014	NULL	pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	ELK1	HGNC	ENSG00000126767	tier1	-	-	74	0	0.00	54	7	11.48
ELMSAN1	0	genome.wustl.edu	37	14	74206049	74206049	+	Silent	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	74206049	74206049	G	A	SNP	ELMSAN1	ENST00000286523	human	ensembl	74_37	-1	known	silent	c.663	p.F221	0.995	NULL	pfam_ELM2_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_ELM2_dom	-	no_errors	ELMSAN1	HGNC	ENSG00000156030	tier1	-	-	139	0	0.00	113	14	11.02
ELMSAN1	0	genome.wustl.edu	37	14	74206049	74206049	+	Silent	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	74206049	74206049	G	A	SNP	ELMSAN1	ENST00000286523	human	ensembl	74_37	-1	known	silent	c.663	p.F221	0.995	NULL	pfam_ELM2_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_ELM2_dom	-	no_errors	ELMSAN1	HGNC	ENSG00000156030	tier1	-	-	154	0	0.00	113	14	11.02
EMC9	0	genome.wustl.edu	37	14	24610321	24610321	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	24610321	24610321	T	G	SNP	EMC9	ENST00000216799	human	ensembl	74_37	-1	known	missense	c.193	p.N65H	1.000	pfam_UPF0172	pfam_UPF0172	-	no_errors	EMC9	HGNC	ENSG00000100908	tier1	-	-	76	0	0.00	63	6	8.70
EMC9	0	genome.wustl.edu	37	14	24610321	24610321	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	24610321	24610321	T	G	SNP	EMC9	ENST00000216799	human	ensembl	74_37	-1	known	missense	c.193	p.N65H	1.000	pfam_UPF0172	pfam_UPF0172	-	no_errors	EMC9	HGNC	ENSG00000100908	tier1	-	-	83	0	0.00	63	6	8.70
EMR3	0	genome.wustl.edu	37	19	14752277	14752277	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	14752277	14752277	A	T	SNP	EMR3	ENST00000253673	human	ensembl	74_37	-1	known	missense	c.1202	p.L401Q	1.000	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_EMR1_rcpt,prints_GPCR_2_secretin-like,prints_GPCR_2_CD97	-	no_errors	EMR3	HGNC	ENSG00000131355	tier1	-	-	82	0	0.00	40	10	20.00
EMR3	0	genome.wustl.edu	37	19	14752277	14752277	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	14752277	14752277	A	T	SNP	EMR3	ENST00000253673	human	ensembl	74_37	-1	known	missense	c.1202	p.L401Q	1.000	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_EMR1_rcpt,prints_GPCR_2_secretin-like,prints_GPCR_2_CD97	-	no_errors	EMR3	HGNC	ENSG00000131355	tier1	-	-	84	0	0.00	40	10	20.00
ENO4	0	genome.wustl.edu	37	10	118628208	118628208	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	118628208	118628208	A	T	SNP	ENO4	ENST00000341276	human	ensembl	74_37	+1	known	missense	c.1047	p.K349N	0.998	NULL	pfam_Enolase_C,pfam_Enolase_N	-	no_errors	ENO4	HGNC	ENSG00000188316	tier1	-	-	107	0	0.00	42	10	19.23
ENO4	0	genome.wustl.edu	37	10	118628208	118628208	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	118628208	118628208	A	T	SNP	ENO4	ENST00000341276	human	ensembl	74_37	+1	known	missense	c.1047	p.K349N	0.998	NULL	pfam_Enolase_C,pfam_Enolase_N	-	no_errors	ENO4	HGNC	ENSG00000188316	tier1	-	-	40	0	0.00	42	10	19.23
ENSG00000213971	0	genome.wustl.edu	37	19	23444889	23444889	+	RNA	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	23444889	23444889	G	A	SNP	ENSG00000213971	ENST00000397094	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.064	-	-	-	no_errors	RP11-15H20.6	Clone_based_vega_gene	ENSG00000213971	tier1	-	-	46	0	0.00	54	13	19.40
ENSG00000213971	0	genome.wustl.edu	37	19	23444889	23444889	+	RNA	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	23444889	23444889	G	A	SNP	ENSG00000213971	ENST00000397094	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.064	-	-	-	no_errors	RP11-15H20.6	Clone_based_vega_gene	ENSG00000213971	tier1	-	-	75	0	0.00	54	13	19.40
ENSG00000222482	0	genome.wustl.edu	37	7	99817694	99817694	+	RNA	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	99817694	99817694	T	C	SNP	ENSG00000222482	ENST00000410550	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors	AC005071.1	Clone_based_ensembl_gene	ENSG00000222482	tier1	-	-	73	0	0.00	189	16	7.58
ENSG00000222482	0	genome.wustl.edu	37	7	99817694	99817694	+	RNA	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	99817694	99817694	T	C	SNP	ENSG00000222482	ENST00000410550	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors	AC005071.1	Clone_based_ensembl_gene	ENSG00000222482	tier1	-	-	92	0	0.00	189	16	7.58
ENSG00000223579	0	genome.wustl.edu	37	22	20640900	20640900	+	RNA	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	22	20640900	20640900	G	A	SNP	ENSG00000223579	ENST00000428139	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.030	-	-	-	no_errors	AC011718.2	Clone_based_vega_gene	ENSG00000223579	tier1	-	-	571	0	0.00	351	33	8.59
ENSG00000224631	0	genome.wustl.edu	37	16	61089349	61089349	+	RNA	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	61089349	61089349	T	G	SNP	ENSG00000224631	ENST00000591758	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.825	-	-	-	no_errors	RP11-51O6.1	Clone_based_vega_gene	ENSG00000224631	tier1	-	-	17	0	0.00	15	8	34.78
ENSG00000224631	0	genome.wustl.edu	37	16	61089349	61089349	+	RNA	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	61089349	61089349	T	G	SNP	ENSG00000224631	ENST00000591758	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.825	-	-	-	no_errors	RP11-51O6.1	Clone_based_vega_gene	ENSG00000224631	tier1	-	-	35	0	0.00	15	8	34.78
ENSG00000226917	0	genome.wustl.edu	37	6	41487171	41487171	+	RNA	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	41487171	41487171	C	G	SNP	ENSG00000226917	ENST00000416951	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-328M4.3	Clone_based_vega_gene	ENSG00000226917	tier1	-	-	43	0	0.00	27	4	12.90
ENSG00000226917	0	genome.wustl.edu	37	6	41487171	41487171	+	RNA	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	41487171	41487171	C	G	SNP	ENSG00000226917	ENST00000416951	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-328M4.3	Clone_based_vega_gene	ENSG00000226917	tier1	-	-	63	0	0.00	27	4	12.90
ENSG00000231817	0	genome.wustl.edu	37	13	47040009	47040009	+	RNA	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	13	47040009	47040009	A	C	SNP	ENSG00000231817	ENST00000594428	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.233	-	-	-	no_errors	RP11-189B4.6	Clone_based_vega_gene	ENSG00000231817	tier1	-	-	50	0	0.00	32	9	21.95
ENSG00000231817	0	genome.wustl.edu	37	13	47040009	47040009	+	RNA	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	13	47040009	47040009	A	C	SNP	ENSG00000231817	ENST00000594428	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.233	-	-	-	no_errors	RP11-189B4.6	Clone_based_vega_gene	ENSG00000231817	tier1	-	-	63	0	0.00	32	9	21.95
ENSG00000233836	0	genome.wustl.edu	37	19	24014655	24014655	+	RNA	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	24014655	24014655	C	A	SNP	ENSG00000233836	ENST00000471224	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.134	-	-	-	no_errors	RP11-255H23.2	Clone_based_vega_gene	ENSG00000233836	tier1	-	-	38	0	0.00	31	7	17.95
ENSG00000233836	0	genome.wustl.edu	37	19	24014655	24014655	+	RNA	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	24014655	24014655	C	A	SNP	ENSG00000233836	ENST00000471224	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.134	-	-	-	no_errors	RP11-255H23.2	Clone_based_vega_gene	ENSG00000233836	tier1	-	-	53	0	0.00	31	7	17.95
ENSG00000242048	0	genome.wustl.edu	37	7	151504030	151504031	+	RNA	INS	-	-	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	151504030	151504031	-	A	INS	ENSG00000242048	ENST00000462083	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.004	-	-	-	no_errors	RP13-452N2.1	Clone_based_vega_gene	ENSG00000242048	tier1			55	0	0.00	24	3	11.11
ENSG00000243655	0	genome.wustl.edu	37	17	22024359	22024359	+	RNA	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	22024359	22024359	T	G	SNP	ENSG00000243655	ENST00000483901	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.297	-	-	-	no_errors	RP11-846F4.12	Clone_based_vega_gene	ENSG00000243655	tier1	-	-	51	0	0.00	42	6	12.50
ENSG00000243655	0	genome.wustl.edu	37	17	22024359	22024359	+	RNA	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	22024359	22024359	T	G	SNP	ENSG00000243655	ENST00000483901	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.297	-	-	-	no_errors	RP11-846F4.12	Clone_based_vega_gene	ENSG00000243655	tier1	-	-	57	0	0.00	42	6	12.50
ENSG00000244306	0	genome.wustl.edu	37	14	19856879	19856879	+	RNA	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	19856879	19856879	T	G	SNP	ENSG00000244306	ENST00000551334	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CTD-2314B22.3	Clone_based_vega_gene	ENSG00000244306	tier1	-	-	172	0	0.00	196	20	9.26
ENSG00000244306	0	genome.wustl.edu	37	14	19856879	19856879	+	RNA	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	19856879	19856879	T	G	SNP	ENSG00000244306	ENST00000551334	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CTD-2314B22.3	Clone_based_vega_gene	ENSG00000244306	tier1	-	-	298	0	0.00	196	20	9.26
ENSG00000248801	0	genome.wustl.edu	37	8	69243593	69243593	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	69243593	69243593	G	A	SNP	ENSG00000248801	ENST00000512294	human	ensembl	74_37	-1	putative	missense	c.130	p.L44F	0.000	NULL	NULL	-	no_errors	RP11-664D7.4	Clone_based_vega_gene	ENSG00000248801				65	0	0.00	51	3	5.56
ENSG00000250685	0	genome.wustl.edu	37	16	84228661	84228661	+	RNA	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	84228661	84228661	T	A	SNP	ENSG00000250685	ENST00000536986	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	RP11-486L19.2	Clone_based_vega_gene	ENSG00000250685	tier1	-	-	116	0	0.00	50	9	15.25
ENSG00000250685	0	genome.wustl.edu	37	16	84228661	84228661	+	RNA	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	84228661	84228661	T	A	SNP	ENSG00000250685	ENST00000536986	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	RP11-486L19.2	Clone_based_vega_gene	ENSG00000250685	tier1	-	-	143	0	0.00	50	9	15.25
ENSG00000252176	0	genome.wustl.edu	37	8	39418521	39418522	+	RNA	DEL	AC	AC	-			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	39418521	39418522	AC	-	DEL	ENSG00000252176	ENST00000516367	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	AC123767.1	Clone_based_ensembl_gene	ENSG00000252176	tier1			20	0	0.00	8	3	27.27
ENSG00000255390	0	genome.wustl.edu	37	11	6642704	6642704	+	RNA	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	6642704	6642704	A	T	SNP	ENSG00000255390	ENST00000526456	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-732A19.5	Clone_based_vega_gene	ENSG00000255390	tier1	-	-	55	0	0.00	35	6	14.63
ENSG00000255390	0	genome.wustl.edu	37	11	6642704	6642704	+	RNA	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	6642704	6642704	A	T	SNP	ENSG00000255390	ENST00000526456	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-732A19.5	Clone_based_vega_gene	ENSG00000255390	tier1	-	-	62	0	0.00	35	6	14.63
ENSG00000256616	0	genome.wustl.edu	37	18	12076569	12076570	+	RNA	INS	-	-	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	18	12076569	12076570	-	G	INS	ENSG00000256616	ENST00000591780	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.996:0.995	-	-	-	no_errors	RP11-815J4.6	Clone_based_vega_gene	ENSG00000256616	tier1			20	0	0.00	12	3	20.00
ENSG00000257057	0	genome.wustl.edu	37	11	94261248	94261248	+	Splice_Site	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	94261248	94261248	A	G	SNP	ENSG00000257057	ENST00000542198	human	ensembl	74_37	+1	known	splice_site	c.NULL	NULL	1.000	-	-	-	no_errors	RP11-867G2.2	Clone_based_vega_gene	ENSG00000257057	tier1	-	-	125	0	0.00	86	7	7.53
ENSG00000257057	0	genome.wustl.edu	37	11	94261248	94261248	+	Splice_Site	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	94261248	94261248	A	G	SNP	ENSG00000257057	ENST00000542198	human	ensembl	74_37	+1	known	splice_site	c.NULL	NULL	1.000	-	-	-	no_errors	RP11-867G2.2	Clone_based_vega_gene	ENSG00000257057	tier1	-	-	171	0	0.00	86	7	7.53
ENSG00000257434	0	genome.wustl.edu	37	12	75435986	75435987	+	RNA	INS	-	-	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	75435986	75435987	-	T	INS	ENSG00000257434	ENST00000547040	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003:0.005	-	-	-	no_errors	RP11-81K13.1	Clone_based_vega_gene	ENSG00000257434	tier1			22	0	0.00	21	4	16.00
ENSG00000260628	0	genome.wustl.edu	37	16	31993268	31993268	+	RNA	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	31993268	31993268	G	A	SNP	ENSG00000260628	ENST00000568570	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-1166P10.1	Clone_based_vega_gene	ENSG00000260628	tier1	-	-	105	0	0.00	60	20	25.00
ENSG00000260628	0	genome.wustl.edu	37	16	31993268	31993268	+	RNA	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	31993268	31993268	G	A	SNP	ENSG00000260628	ENST00000568570	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-1166P10.1	Clone_based_vega_gene	ENSG00000260628	tier1	-	-	109	0	0.00	60	20	25.00
ENSG00000263369	0	genome.wustl.edu	37	17	30434424	30434424	+	RNA	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	30434424	30434424	T	A	SNP	ENSG00000263369	ENST00000580412	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.920	-	-	-	no_errors	RP11-640N20.9	Clone_based_vega_gene	ENSG00000263369	tier1	-	-	129	0	0.00	131	7	5.07
ENSG00000263369	0	genome.wustl.edu	37	17	30434424	30434424	+	RNA	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	30434424	30434424	T	A	SNP	ENSG00000263369	ENST00000580412	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.920	-	-	-	no_errors	RP11-640N20.9	Clone_based_vega_gene	ENSG00000263369	tier1	-	-	158	0	0.00	131	7	5.07
ENSG00000264057	0	genome.wustl.edu	37	17	62923869	62923869	+	RNA	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	62923869	62923869	C	A	SNP	ENSG00000264057	ENST00000585187	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-583F2.1	Clone_based_vega_gene	ENSG00000264057	tier1	-	-	139	0	0.00	112	15	11.81
ENSG00000264057	0	genome.wustl.edu	37	17	62923869	62923869	+	RNA	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	62923869	62923869	C	A	SNP	ENSG00000264057	ENST00000585187	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-583F2.1	Clone_based_vega_gene	ENSG00000264057	tier1	-	-	192	0	0.00	112	15	11.81
ENSG00000264222	0	genome.wustl.edu	37	18	14251963	14251963	+	Splice_Site	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	18	14251963	14251963	A	C	SNP	ENSG00000264222	ENST00000580200	human	ensembl	74_37	+1	known	splice_site	c.NULL	NULL	0.387	-	-	-	no_errors	RP11-757O6.1	Clone_based_vega_gene	ENSG00000264222	tier1	-	-	13	0	0.00	12	7	36.84
ENSG00000264222	0	genome.wustl.edu	37	18	14251963	14251963	+	Splice_Site	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	18	14251963	14251963	A	C	SNP	ENSG00000264222	ENST00000580200	human	ensembl	74_37	+1	known	splice_site	c.NULL	NULL	0.387	-	-	-	no_errors	RP11-757O6.1	Clone_based_vega_gene	ENSG00000264222	tier1	-	-	16	0	0.00	12	7	36.84
EPB41L3	0	genome.wustl.edu	37	18	5630574	5630574	+	RNA	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	18	5630574	5630574	C	T	SNP	EPB41L3	ENST00000578431	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.240	-	-	-	no_errors	EPB41L3	HGNC	ENSG00000082397	tier1	-	-	49	0	0.00	30	13	30.23
EPB41L3	0	genome.wustl.edu	37	18	5630574	5630574	+	RNA	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	18	5630574	5630574	C	T	SNP	EPB41L3	ENST00000578431	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.240	-	-	-	no_errors	EPB41L3	HGNC	ENSG00000082397	tier1	-	-	56	0	0.00	30	13	30.23
EPHB1	0	genome.wustl.edu	37	3	134911630	134911630	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	134911630	134911630	T	G	SNP	EPHB1	ENST00000398015	human	ensembl	74_37	+1	known	missense	c.2095	p.F699V	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHB1	HGNC	ENSG00000154928	tier1	-	-	68	0	0.00	66	6	8.33
EPHB1	0	genome.wustl.edu	37	3	134911630	134911630	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	134911630	134911630	T	G	SNP	EPHB1	ENST00000398015	human	ensembl	74_37	+1	known	missense	c.2095	p.F699V	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHB1	HGNC	ENSG00000154928	tier1	-	-	81	0	0.00	66	6	8.33
EPHB1	0	genome.wustl.edu	37	3	134960052	134960052	+	Silent	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	134960052	134960052	A	G	SNP	EPHB1	ENST00000398015	human	ensembl	74_37	+1	known	silent	c.2409	p.S803	0.413	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHB1	HGNC	ENSG00000154928	tier1	-	-	83	0	0.00	65	5	7.14
EPHB1	0	genome.wustl.edu	37	3	134960052	134960052	+	Silent	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	134960052	134960052	A	G	SNP	EPHB1	ENST00000398015	human	ensembl	74_37	+1	known	silent	c.2409	p.S803	0.413	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHB1	HGNC	ENSG00000154928	tier1	-	-	88	0	0.00	65	5	7.14
EPPK1	0	genome.wustl.edu	37	8	144942164	144942164	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	144942164	144942164	C	T	SNP	EPPK1	ENST00000525985	human	ensembl	74_37	-1	known	missense	c.5258	p.G1753D	1.000	smart_Plectin_repeat	pfam_Plectin_repeat,smart_Plectin_repeat	-	no_errors	EPPK1	HGNC	ENSG00000227184	tier1	-	-	119	0	0.00	93	11	10.58
EPPK1	0	genome.wustl.edu	37	8	144942164	144942164	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	144942164	144942164	C	T	SNP	EPPK1	ENST00000525985	human	ensembl	74_37	-1	known	missense	c.5258	p.G1753D	1.000	smart_Plectin_repeat	pfam_Plectin_repeat,smart_Plectin_repeat	-	no_errors	EPPK1	HGNC	ENSG00000227184	tier1	-	-	123	0	0.00	93	11	10.58
ERBB4	0	genome.wustl.edu	37	2	212566835	212566835	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	212566835	212566835	G	T	SNP	ERBB4	ENST00000342788	human	ensembl	74_37	-1	known	missense	c.1346	p.S449Y	1.000	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_EGF_rcpt_L	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ERBB4	HGNC	ENSG00000178568	tier1	-	-	45	0	0.00	40	10	20.00
ERBB4	0	genome.wustl.edu	37	2	212566835	212566835	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	212566835	212566835	G	T	SNP	ERBB4	ENST00000342788	human	ensembl	74_37	-1	known	missense	c.1346	p.S449Y	1.000	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_EGF_rcpt_L	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ERBB4	HGNC	ENSG00000178568	tier1	-	-	87	0	0.00	40	10	20.00
ERMARD	0	genome.wustl.edu	37	6	170176094	170176094	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	170176094	170176094	G	A	SNP	ERMARD	ENST00000366773	human	ensembl	74_37	+1	known	missense	c.1453	p.E485K	0.280	NULL	NULL	-	no_errors	ERMARD	HGNC	ENSG00000130023	tier1	-	-	30	0	0.00	12	9	42.86
ERMARD	0	genome.wustl.edu	37	6	170176094	170176094	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	170176094	170176094	G	A	SNP	ERMARD	ENST00000366773	human	ensembl	74_37	+1	known	missense	c.1453	p.E485K	0.280	NULL	NULL	-	no_errors	ERMARD	HGNC	ENSG00000130023	tier1	-	-	43	0	0.00	12	9	42.86
ERV3-1	0	genome.wustl.edu	37	7	64452676	64452676	+	Silent	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	64452676	64452676	A	C	SNP	ERV3-1	ENST00000394323	human	ensembl	74_37	-1	known	silent	c.729	p.T243	0.633	NULL	NULL	-	no_errors	ERV3-1	HGNC	ENSG00000213462	tier1	-	-	35	0	0.00	20	9	31.03
ERV3-1	0	genome.wustl.edu	37	7	64452676	64452676	+	Silent	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	64452676	64452676	A	C	SNP	ERV3-1	ENST00000394323	human	ensembl	74_37	-1	known	silent	c.729	p.T243	0.633	NULL	NULL	-	no_errors	ERV3-1	HGNC	ENSG00000213462	tier1	-	-	36	0	0.00	20	9	31.03
EVA1A	0	genome.wustl.edu	37	2	75745265	75745265	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	75745265	75745265	A	G	SNP	EVA1A	ENST00000233712	human	ensembl	74_37	-1	known	missense	c.2	p.M1T	0.041	NULL	NULL	-	no_errors	EVA1A	HGNC	ENSG00000115363	tier1	-	-	64	0	0.00	26	26	50.00
EVA1A	0	genome.wustl.edu	37	2	75745265	75745265	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	75745265	75745265	A	G	SNP	EVA1A	ENST00000233712	human	ensembl	74_37	-1	known	missense	c.2	p.M1T	0.041	NULL	NULL	-	no_errors	EVA1A	HGNC	ENSG00000115363	tier1	-	-	71	0	0.00	26	26	50.00
EYA1	0	genome.wustl.edu	37	8	72234487	72234487	+	Silent	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	72234487	72234487	A	G	SNP	EYA1	ENST00000340726	human	ensembl	74_37	-1	known	silent	c.219	p.S73	1.000	NULL	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_EYA	-	no_errors	EYA1	HGNC	ENSG00000104313	tier1	-	-	59	0	0.00	18	34	65.38
FA2H	0	genome.wustl.edu	37	16	74753017	74753017	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	74753017	74753017	A	G	SNP	FA2H	ENST00000219368	human	ensembl	74_37	-1	known	missense	c.655	p.F219L	1.000	pfam_Fatty_acid_hydroxylase,pirsf_Ino-phos-ceramide-B_Hydrxlase	pfam_Fatty_acid_hydroxylase,pfam_Cyt_B5-like_heme/steroid-bd,superfamily_Cyt_B5-like_heme/steroid-bd,pirsf_Ino-phos-ceramide-B_Hydrxlase,pfscan_Cyt_B5-like_heme/steroid-bd,prints_Cyt_B5-like_heme/steroid-bd	-	no_errors	FA2H	HGNC	ENSG00000103089				52	0	0.00	21	2	8.70
FAF1	0	genome.wustl.edu	37	1	51001111	51001111	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	51001111	51001111	T	A	SNP	FAF1	ENST00000371778	human	ensembl	74_37	-1	known	missense	c.1424	p.E475V	1.000	smart_UAS	pfam_UBX,superfamily_UBA-like,smart_UAS,smart_UBX,pfscan_UBX	-	no_errors	FAF1	HGNC	ENSG00000185104	tier1	-	-	110	0	0.00	41	23	35.94
FAF1	0	genome.wustl.edu	37	1	51001111	51001111	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	51001111	51001111	T	A	SNP	FAF1	ENST00000371778	human	ensembl	74_37	-1	known	missense	c.1424	p.E475V	1.000	smart_UAS	pfam_UBX,superfamily_UBA-like,smart_UAS,smart_UBX,pfscan_UBX	-	no_errors	FAF1	HGNC	ENSG00000185104	tier1	-	-	66	0	0.00	41	23	35.94
FAM131A	0	genome.wustl.edu	37	3	184056194	184056194	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	184056194	184056194	G	A	SNP	FAM131A	ENST00000383847	human	ensembl	74_37	+1	known	nonsense	c.108	p.W36*	1.000	NULL	NULL	-	no_errors	FAM131A	HGNC	ENSG00000175182	tier1	-	-	65	0	0.00	51	4	7.14
FAM131A	0	genome.wustl.edu	37	3	184056194	184056194	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	184056194	184056194	G	A	SNP	FAM131A	ENST00000383847	human	ensembl	74_37	+1	known	nonsense	c.108	p.W36*	1.000	NULL	NULL	-	no_errors	FAM131A	HGNC	ENSG00000175182	tier1	-	-	82	0	0.00	51	4	7.14
FAM160A2	0	genome.wustl.edu	37	11	6243800	6243800	+	Nonsense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	6243800	6243800	C	A	SNP	FAM160A2	ENST00000265978	human	ensembl	74_37	-1	known	nonsense	c.1063	p.E355*	1.000	pfam_RetinoicA-induced_16-like	pfam_RetinoicA-induced_16-like	-	no_errors	FAM160A2	HGNC	ENSG00000051009	tier1	-	-	77	0	0.00	47	13	21.67
FAM160A2	0	genome.wustl.edu	37	11	6243800	6243800	+	Nonsense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	6243800	6243800	C	A	SNP	FAM160A2	ENST00000265978	human	ensembl	74_37	-1	known	nonsense	c.1063	p.E355*	1.000	pfam_RetinoicA-induced_16-like	pfam_RetinoicA-induced_16-like	-	no_errors	FAM160A2	HGNC	ENSG00000051009	tier1	-	-	79	0	0.00	47	13	21.67
FAM189A1	0	genome.wustl.edu	37	15	29415829	29415829	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	29415829	29415829	A	G	SNP	FAM189A1	ENST00000261275	human	ensembl	74_37	-1	known	missense	c.1333	p.C445R	0.978	NULL	pfam_CD20-like	-	no_errors	FAM189A1	HGNC	ENSG00000104059	tier1	-	-	69	0	0.00	33	9	21.43
FAM189A1	0	genome.wustl.edu	37	15	29415829	29415829	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	29415829	29415829	A	G	SNP	FAM189A1	ENST00000261275	human	ensembl	74_37	-1	known	missense	c.1333	p.C445R	0.978	NULL	pfam_CD20-like	-	no_errors	FAM189A1	HGNC	ENSG00000104059	tier1	-	-	83	0	0.00	33	9	21.43
FAM212B	0	genome.wustl.edu	37	1	112281959	112281959	+	RNA	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	112281959	112281959	C	A	SNP	FAM212B	ENST00000527570	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.074	-	-	-	no_errors	FAM212B	HGNC	ENSG00000197852	tier1	-	-	22	0	0.00	10	4	28.57
FAM212B	0	genome.wustl.edu	37	1	112281959	112281959	+	RNA	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	112281959	112281959	C	A	SNP	FAM212B	ENST00000527570	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.074	-	-	-	no_errors	FAM212B	HGNC	ENSG00000197852	tier1	-	-	23	0	0.00	10	4	28.57
FAM230A	0	genome.wustl.edu	37	22	20710061	20710061	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	22	20710061	20710061	G	C	SNP	FAM230A	ENST00000434783	human	ensembl	74_37	+1	known	missense	c.1793	p.R598T	0.106	superfamily_Kinase-like_dom	pfam_Ret-finger_pr-like_3_antisense,superfamily_Kinase-like_dom	-	no_errors	FAM230A	HGNC	ENSG00000188280	tier1	-	-	113	0	0.00	85	14	14.14
FAM230A	0	genome.wustl.edu	37	22	20710061	20710061	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	22	20710061	20710061	G	C	SNP	FAM230A	ENST00000434783	human	ensembl	74_37	+1	known	missense	c.1793	p.R598T	0.106	superfamily_Kinase-like_dom	pfam_Ret-finger_pr-like_3_antisense,superfamily_Kinase-like_dom	-	no_errors	FAM230A	HGNC	ENSG00000188280	tier1	-	-	123	0	0.00	85	14	14.14
FAM65B	0	genome.wustl.edu	37	6	24839446	24839446	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	24839446	24839446	T	C	SNP	FAM65B	ENST00000259698	human	ensembl	74_37	-1	known	missense	c.1975	p.S659G	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	FAM65B	HGNC	ENSG00000111913	tier1	-	-	55	0	0.00	23	13	36.11
FAM65B	0	genome.wustl.edu	37	6	24839446	24839446	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	24839446	24839446	T	C	SNP	FAM65B	ENST00000259698	human	ensembl	74_37	-1	known	missense	c.1975	p.S659G	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	FAM65B	HGNC	ENSG00000111913	tier1	-	-	81	0	0.00	23	13	36.11
FAM65C	0	genome.wustl.edu	37	20	49203726	49203727	+	RNA	INS	-	-	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	20	49203726	49203727	-	A	INS	FAM65C	ENST00000462842	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	FAM65C	HGNC	ENSG00000042062	tier1			24	0	0.00	24	2	7.69
FAM65C	0	genome.wustl.edu	37	20	49203726	49203727	+	RNA	INS	-	-	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	20	49203726	49203727	-	A	INS	FAM65C	ENST00000462842	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	FAM65C	HGNC	ENSG00000042062	tier1			33	0	0.00	24	2	7.69
FAM71F2	0	genome.wustl.edu	37	7	128320107	128320107	+	Frame_Shift_Del	DEL	C	C	-			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	128320107	128320107	C	-	DEL	FAM71F2	ENST00000480462	human	ensembl	74_37	+1	known	frame_shift_del	c.638	p.Q215fs	0.232	NULL	pfam_DUF3699	-	no_errors	FAM71F2	HGNC	ENSG00000205085	tier1			61	0	0.00	37	2	5.13
FAM71F2	0	genome.wustl.edu	37	7	128320107	128320107	+	Frame_Shift_Del	DEL	C	C	-			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	128320107	128320107	C	-	DEL	FAM71F2	ENST00000480462	human	ensembl	74_37	+1	known	frame_shift_del	c.638	p.Q215fs	0.232	NULL	pfam_DUF3699	-	no_errors	FAM71F2	HGNC	ENSG00000205085	tier1			71	0	0.00	37	2	5.13
FAM81A	0	genome.wustl.edu	37	15	59799504	59799504	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	59799504	59799504	T	G	SNP	FAM81A	ENST00000288228	human	ensembl	74_37	+1	known	missense	c.506	p.L169R	0.815	NULL	superfamily_Ferritin-like_SF	-	no_errors	FAM81A	HGNC	ENSG00000157470	tier1	-	-	46	0	0.00	35	4	10.26
FAM81A	0	genome.wustl.edu	37	15	59799504	59799504	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	59799504	59799504	T	G	SNP	FAM81A	ENST00000288228	human	ensembl	74_37	+1	known	missense	c.506	p.L169R	0.815	NULL	superfamily_Ferritin-like_SF	-	no_errors	FAM81A	HGNC	ENSG00000157470	tier1	-	-	76	0	0.00	35	4	10.26
FANCM	0	genome.wustl.edu	37	14	45628400	45628400	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	45628400	45628400	C	T	SNP	FANCM	ENST00000267430	human	ensembl	74_37	+1	known	nonsense	c.1498	p.Q500*	0.999	superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Restrct_endonuc-II-like,superfamily_RuvA_2-like,smart_Helicase_ATP-bd,smart_Helicase_C,smart_ERCC4_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	FANCM	HGNC	ENSG00000187790	tier1	-	-	111	0	0.00	78	22	22.00
FANCM	0	genome.wustl.edu	37	14	45628400	45628400	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	45628400	45628400	C	T	SNP	FANCM	ENST00000267430	human	ensembl	74_37	+1	known	nonsense	c.1498	p.Q500*	0.999	superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Restrct_endonuc-II-like,superfamily_RuvA_2-like,smart_Helicase_ATP-bd,smart_Helicase_C,smart_ERCC4_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	FANCM	HGNC	ENSG00000187790	tier1	-	-	150	0	0.00	78	22	22.00
FARP2	0	genome.wustl.edu	37	2	242343251	242343251	+	Silent	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	242343251	242343251	C	T	SNP	FARP2	ENST00000264042	human	ensembl	74_37	+1	known	silent	c.192	p.C64	0.000	pfam_FERM_N,smart_Band_41_domain,pfscan_FERM_domain,prints_Ez/rad/moesin_like	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_FERM_PH-like_C,pfam_FERM_N,pfam_FERM_central,pfam_FERM-adjacent,superfamily_DH-domain,superfamily_FERM_central,smart_Band_41_domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_FERM_domain,pfscan_Pleckstrin_homology,pfscan_DH-domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	FARP2	HGNC	ENSG00000006607				116	0	0.00	55	3	5.17
FAT1	0	genome.wustl.edu	37	4	187541074	187541074	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	187541074	187541074	G	C	SNP	FAT1	ENST00000441802	human	ensembl	74_37	-1	known	missense	c.6666	p.D2222E	0.858	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT1	HGNC	ENSG00000083857	tier1	-	-	39	0	0.00	30	7	18.92
FAT1	0	genome.wustl.edu	37	4	187541074	187541074	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	187541074	187541074	G	C	SNP	FAT1	ENST00000441802	human	ensembl	74_37	-1	known	missense	c.6666	p.D2222E	0.858	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT1	HGNC	ENSG00000083857	tier1	-	-	46	0	0.00	30	7	18.92
FAT2	0	genome.wustl.edu	37	5	150922227	150922227	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	150922227	150922227	C	A	SNP	FAT2	ENST00000261800	human	ensembl	74_37	-1	known	missense	c.8461	p.A2821S	0.988	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT2	HGNC	ENSG00000086570	tier1	-	-	23	0	0.00	12	3	20.00
FAT2	0	genome.wustl.edu	37	5	150922227	150922227	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	150922227	150922227	C	A	SNP	FAT2	ENST00000261800	human	ensembl	74_37	-1	known	missense	c.8461	p.A2821S	0.988	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT2	HGNC	ENSG00000086570	tier1	-	-	24	0	0.00	12	3	20.00
FAT3	0	genome.wustl.edu	37	11	92570848	92570848	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	92570848	92570848	T	G	SNP	FAT3	ENST00000298047	human	ensembl	74_37	+1	known	missense	c.10244	p.L3415R	0.787	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323	tier1	-	-	63	0	0.00	44	7	13.73
FAT3	0	genome.wustl.edu	37	11	92570848	92570848	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	92570848	92570848	T	G	SNP	FAT3	ENST00000298047	human	ensembl	74_37	+1	known	missense	c.10244	p.L3415R	0.787	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323	tier1	-	-	72	0	0.00	44	7	13.73
FBRSL1	0	genome.wustl.edu	37	12	133151044	133151044	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	133151044	133151044	C	T	SNP	FBRSL1	ENST00000434748	human	ensembl	74_37	+1	known	missense	c.1724	p.A575V	0.000	NULL	prints_AUTS2	-	no_errors	FBRSL1	HGNC	ENSG00000112787	tier1	-	-	51	0	0.00	36	7	16.28
FBRSL1	0	genome.wustl.edu	37	12	133151044	133151044	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	133151044	133151044	C	T	SNP	FBRSL1	ENST00000434748	human	ensembl	74_37	+1	known	missense	c.1724	p.A575V	0.000	NULL	prints_AUTS2	-	no_errors	FBRSL1	HGNC	ENSG00000112787	tier1	-	-	66	0	0.00	36	7	16.28
FBXL17	0	genome.wustl.edu	37	5	107703648	107703648	+	Frame_Shift_Del	DEL	A	A	-			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	107703648	107703648	A	-	DEL	FBXL17	ENST00000542267	human	ensembl	74_37	-1	known	frame_shift_del	c.1000	p.S334fs	1.000	pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom	pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_F-box_dom	-	no_errors	FBXL17	HGNC	ENSG00000145743	tier1			75	0	0.00	33	6	15.38
FBXO15	0	genome.wustl.edu	37	18	71740727	71740727	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	18	71740727	71740727	T	A	SNP	FBXO15	ENST00000419743	human	ensembl	74_37	-1	known	missense	c.1502	p.K501I	0.873	NULL	pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO15	HGNC	ENSG00000141665	tier1	-	-	63	0	0.00	20	24	54.55
FBXO15	0	genome.wustl.edu	37	18	71740727	71740727	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	18	71740727	71740727	T	A	SNP	FBXO15	ENST00000419743	human	ensembl	74_37	-1	known	missense	c.1502	p.K501I	0.873	NULL	pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO15	HGNC	ENSG00000141665	tier1	-	-	82	0	0.00	20	24	54.55
FCGBP	0	genome.wustl.edu	37	19	40357618	40357618	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	40357618	40357618	C	T	SNP	FCGBP	ENST00000221347	human	ensembl	74_37	-1	known	missense	c.15695	p.R5232H	0.000	smart_VWC_out,smart_Fol_N,smart_VWF_type-D	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_Fol_N,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,smart_VWF_C,smart_VWC_out	-	no_errors	FCGBP	HGNC	ENSG00000090920				47	0	0.00	30	3	9.09
FEM1B	0	genome.wustl.edu	37	15	68582040	68582040	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	68582040	68582040	A	G	SNP	FEM1B	ENST00000306917	human	ensembl	74_37	+1	known	missense	c.344	p.N115S	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	FEM1B	HGNC	ENSG00000169018	tier1	-	-	51	0	0.00	35	15	30.00
FEM1B	0	genome.wustl.edu	37	15	68582040	68582040	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	68582040	68582040	A	G	SNP	FEM1B	ENST00000306917	human	ensembl	74_37	+1	known	missense	c.344	p.N115S	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	FEM1B	HGNC	ENSG00000169018	tier1	-	-	94	0	0.00	35	15	30.00
FHIT	0	genome.wustl.edu	37	3	59999794	59999794	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	59999794	59999794	T	C	SNP	FHIT	ENST00000341848	human	ensembl	74_37	-1	known	missense	c.188	p.Q63R	1.000	pfam_Histidine_triad_HIT,superfamily_HIT-like,pfscan_HIT-like	pfam_Histidine_triad_HIT,superfamily_HIT-like,pfscan_HIT-like	-	no_errors	FHIT	HGNC	ENSG00000189283				55	0	0.00	24	3	11.11
FHL5	0	genome.wustl.edu	37	6	97058456	97058456	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	97058456	97058456	T	C	SNP	FHL5	ENST00000326771	human	ensembl	74_37	+1	known	silent	c.513	p.T171	0.866	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	FHL5	HGNC	ENSG00000112214				95	0	0.00	51	3	5.56
FIGN	0	genome.wustl.edu	37	2	164467610	164467610	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	164467610	164467610	A	C	SNP	FIGN	ENST00000333129	human	ensembl	74_37	-1	known	missense	c.732	p.S244R	1.000	NULL	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	FIGN	HGNC	ENSG00000182263	tier1	-	-	48	0	0.00	32	18	35.29
FIGN	0	genome.wustl.edu	37	2	164467610	164467610	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	164467610	164467610	A	C	SNP	FIGN	ENST00000333129	human	ensembl	74_37	-1	known	missense	c.732	p.S244R	1.000	NULL	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	FIGN	HGNC	ENSG00000182263	tier1	-	-	69	0	0.00	32	18	35.29
FLG	0	genome.wustl.edu	37	1	152283719	152283719	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	152283719	152283719	T	G	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	missense	c.3643	p.S1215R	0.001	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631	tier1	-	-	194	0	0.00	115	22	16.06
FLG	0	genome.wustl.edu	37	1	152286751	152286751	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	152286751	152286751	A	C	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	missense	c.611	p.L204R	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631	tier1	-	-	28	0	0.00	35	8	18.18
FLG	0	genome.wustl.edu	37	1	152286751	152286751	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	152286751	152286751	A	C	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	missense	c.611	p.L204R	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631	tier1	-	-	56	0	0.00	35	8	18.18
FLG2	0	genome.wustl.edu	37	1	152329678	152329678	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	152329678	152329678	T	C	SNP	FLG2	ENST00000388718	human	ensembl	74_37	-1	known	missense	c.584	p.D195G	0.022	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG2	HGNC	ENSG00000143520	tier1	-	-	41	0	0.00	44	6	12.00
FLG2	0	genome.wustl.edu	37	1	152329678	152329678	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	152329678	152329678	T	C	SNP	FLG2	ENST00000388718	human	ensembl	74_37	-1	known	missense	c.584	p.D195G	0.022	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG2	HGNC	ENSG00000143520	tier1	-	-	43	0	0.00	44	6	12.00
FLJ33360	0	genome.wustl.edu	37	5	6312630	6312630	+	RNA	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	6312630	6312630	C	T	SNP	FLJ33360	ENST00000507444	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTD-2324F15.2	Clone_based_vega_gene	ENSG00000250490	tier1	-	-	35	0	0.00	25	5	16.67
FLJ33360	0	genome.wustl.edu	37	5	6312630	6312630	+	RNA	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	6312630	6312630	C	T	SNP	FLJ33360	ENST00000507444	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTD-2324F15.2	Clone_based_vega_gene	ENSG00000250490	tier1	-	-	43	0	0.00	25	5	16.67
FMO2	0	genome.wustl.edu	37	1	171178126	171178126	+	RNA	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	171178126	171178126	G	T	SNP	FMO2	ENST00000529935	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	FMO2	HGNC	ENSG00000094963	tier1	-	-	78	0	0.00	38	4	9.52
FMO2	0	genome.wustl.edu	37	1	171178126	171178126	+	RNA	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	171178126	171178126	G	T	SNP	FMO2	ENST00000529935	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	FMO2	HGNC	ENSG00000094963	tier1	-	-	80	0	0.00	38	4	9.52
FNDC1	0	genome.wustl.edu	37	6	159660639	159660639	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	159660639	159660639	A	C	SNP	FNDC1	ENST00000297267	human	ensembl	74_37	+1	known	missense	c.4271	p.K1424T	0.987	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	FNDC1	HGNC	ENSG00000164694	tier1	-	-	131	0	0.00	108	10	8.47
FNDC1	0	genome.wustl.edu	37	6	159660639	159660639	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	159660639	159660639	A	C	SNP	FNDC1	ENST00000297267	human	ensembl	74_37	+1	known	missense	c.4271	p.K1424T	0.987	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	FNDC1	HGNC	ENSG00000164694	tier1	-	-	170	0	0.00	108	10	8.47
FOLH1	0	genome.wustl.edu	37	11	49227684	49227684	+	Silent	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	49227684	49227684	A	G	SNP	FOLH1	ENST00000256999	human	ensembl	74_37	-1	known	silent	c.159	p.T53	0.007	NULL	pfam_TFR-like_dimer_dom,pfam_Protease-assoc_domain,pfam_Peptidase_M28,superfamily_TFR-like_dimer_dom	-	no_errors	FOLH1	HGNC	ENSG00000086205	tier1	-	-	119	0	0.00	71	28	28.28
FOLH1	0	genome.wustl.edu	37	11	49227684	49227684	+	Silent	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	49227684	49227684	A	G	SNP	FOLH1	ENST00000256999	human	ensembl	74_37	-1	known	silent	c.159	p.T53	0.007	NULL	pfam_TFR-like_dimer_dom,pfam_Protease-assoc_domain,pfam_Peptidase_M28,superfamily_TFR-like_dimer_dom	-	no_errors	FOLH1	HGNC	ENSG00000086205	tier1	-	-	69	0	0.00	71	28	28.28
FOXF2	0	genome.wustl.edu	37	6	1390986	1390986	+	Silent	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	1390986	1390986	C	T	SNP	FOXF2	ENST00000259806	human	ensembl	74_37	+1	known	silent	c.804	p.H268	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXF2	HGNC	ENSG00000137273	tier1	-	-	10	0	0.00	2	4	66.67
FOXG1	0	genome.wustl.edu	37	14	29237018	29237018	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	29237018	29237018	A	C	SNP	FOXG1	ENST00000313071	human	ensembl	74_37	+1	known	missense	c.533	p.K178T	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXG1	HGNC	ENSG00000176165	tier1	-	-	45	0	0.00	16	9	34.62
FOXG1	0	genome.wustl.edu	37	14	29237018	29237018	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	29237018	29237018	A	C	SNP	FOXG1	ENST00000313071	human	ensembl	74_37	+1	known	missense	c.533	p.K178T	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXG1	HGNC	ENSG00000176165	tier1	-	-	54	0	0.00	16	9	34.62
FPGT	0	genome.wustl.edu	37	1	74671035	74671035	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	74671035	74671035	T	G	SNP	FPGT	ENST00000370898	human	ensembl	74_37	+1	known	missense	c.1343	p.I448S	1.000	pfam_Fucokinase,superfamily_Trimer_LpxA-like,pirsf_Fucose-1-phosphate_GuaTrfase	pfam_Fucokinase,superfamily_Trimer_LpxA-like,pirsf_Fucose-1-phosphate_GuaTrfase	-	no_errors	FPGT	HGNC	ENSG00000254685	tier1	-	-	105	0	0.00	75	7	8.54
FPGT	0	genome.wustl.edu	37	1	74671035	74671035	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	74671035	74671035	T	G	SNP	FPGT	ENST00000370898	human	ensembl	74_37	+1	known	missense	c.1343	p.I448S	1.000	pfam_Fucokinase,superfamily_Trimer_LpxA-like,pirsf_Fucose-1-phosphate_GuaTrfase	pfam_Fucokinase,superfamily_Trimer_LpxA-like,pirsf_Fucose-1-phosphate_GuaTrfase	-	no_errors	FPGT	HGNC	ENSG00000254685	tier1	-	-	140	0	0.00	75	7	8.54
FSCB	0	genome.wustl.edu	37	14	44974872	44974872	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	44974872	44974872	A	C	SNP	FSCB	ENST00000340446	human	ensembl	74_37	-1	known	missense	c.1319	p.L440R	0.000	NULL	NULL	-	no_errors	FSCB	HGNC	ENSG00000189139	tier1	-	-	49	0	0.00	25	8	24.24
FSCB	0	genome.wustl.edu	37	14	44974872	44974872	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	44974872	44974872	A	C	SNP	FSCB	ENST00000340446	human	ensembl	74_37	-1	known	missense	c.1319	p.L440R	0.000	NULL	NULL	-	no_errors	FSCB	HGNC	ENSG00000189139	tier1	-	-	54	0	0.00	25	8	24.24
FSTL5	0	genome.wustl.edu	37	4	162697055	162697055	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	162697055	162697055	A	G	SNP	FSTL5	ENST00000306100	human	ensembl	74_37	-1	known	missense	c.581	p.L194P	1.000	pfscan_EF_hand_dom	pfam_Ig_I-set,pfam_Kazal_dom,pfam_Ig_V-set,smart_Kazal_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_EF_hand_dom,pfscan_Ig-like_dom	-	no_errors	FSTL5	HGNC	ENSG00000168843	tier1	-	-	24	0	0.00	13	8	38.10
FSTL5	0	genome.wustl.edu	37	4	162697055	162697055	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	162697055	162697055	A	G	SNP	FSTL5	ENST00000306100	human	ensembl	74_37	-1	known	missense	c.581	p.L194P	1.000	pfscan_EF_hand_dom	pfam_Ig_I-set,pfam_Kazal_dom,pfam_Ig_V-set,smart_Kazal_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_EF_hand_dom,pfscan_Ig-like_dom	-	no_errors	FSTL5	HGNC	ENSG00000168843	tier1	-	-	42	0	0.00	13	8	38.10
FZD5	0	genome.wustl.edu	37	2	208632693	208632693	+	Silent	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	208632693	208632693	G	A	SNP	FZD5	ENST00000295417	human	ensembl	74_37	-1	known	silent	c.771	p.F257	1.000	pfam_Frizzled,pfscan_GPCR_2-like,prints_Frizzled	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD5	HGNC	ENSG00000163251	tier1	-	-	52	0	0.00	44	6	12.00
FZD5	0	genome.wustl.edu	37	2	208632693	208632693	+	Silent	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	208632693	208632693	G	A	SNP	FZD5	ENST00000295417	human	ensembl	74_37	-1	known	silent	c.771	p.F257	1.000	pfam_Frizzled,pfscan_GPCR_2-like,prints_Frizzled	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD5	HGNC	ENSG00000163251	tier1	-	-	66	0	0.00	44	6	12.00
G3BP2	0	genome.wustl.edu	37	4	76572306	76572306	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	76572306	76572306	G	A	SNP	G3BP2	ENST00000359707	human	ensembl	74_37	-1	known	missense	c.964	p.R322C	1.000	NULL	pfam_NTF2,pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,pfscan_Nuclear_transport_factor_2_euk	-	no_errors	G3BP2	HGNC	ENSG00000138757	tier1	-	-	15	0	0.00	8	5	38.46
G3BP2	0	genome.wustl.edu	37	4	76572306	76572306	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	76572306	76572306	G	A	SNP	G3BP2	ENST00000359707	human	ensembl	74_37	-1	known	missense	c.964	p.R322C	1.000	NULL	pfam_NTF2,pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,pfscan_Nuclear_transport_factor_2_euk	-	no_errors	G3BP2	HGNC	ENSG00000138757	tier1	-	-	29	0	0.00	8	5	38.46
GABRA1	0	genome.wustl.edu	37	5	161300296	161300296	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	161300296	161300296	C	A	SNP	GABRA1	ENST00000023897	human	ensembl	74_37	+1	known	missense	c.429	p.N143K	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAa_rcpt,prints_GABAA_rcpt,prints_GABBAa1_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRA1	HGNC	ENSG00000022355	tier1	-	-	67	0	0.00	57	19	25.00
GABRA1	0	genome.wustl.edu	37	5	161300296	161300296	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	161300296	161300296	C	A	SNP	GABRA1	ENST00000023897	human	ensembl	74_37	+1	known	missense	c.429	p.N143K	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAa_rcpt,prints_GABAA_rcpt,prints_GABBAa1_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRA1	HGNC	ENSG00000022355	tier1	-	-	89	0	0.00	57	19	25.00
GABRB3	0	genome.wustl.edu	37	15	26812796	26812796	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	26812796	26812796	A	T	SNP	GABRB3	ENST00000299267	human	ensembl	74_37	-1	known	missense	c.767	p.L256Q	1.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,prints_GABAAb_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRB3	HGNC	ENSG00000166206	tier1	-	-	42	0	0.00	30	5	14.29
GABRB3	0	genome.wustl.edu	37	15	26812796	26812796	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	26812796	26812796	A	T	SNP	GABRB3	ENST00000299267	human	ensembl	74_37	-1	known	missense	c.767	p.L256Q	1.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,prints_GABAAb_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRB3	HGNC	ENSG00000166206	tier1	-	-	55	0	0.00	30	5	14.29
GATA1	0	genome.wustl.edu	37	X	48652484	48652484	+	Silent	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	48652484	48652484	C	G	SNP	GATA1	ENST00000376670	human	ensembl	74_37	+1	known	silent	c.1155	p.P385	0.001	pirsf_TF_GATA-1/2/3	pfam_Znf_GATA,smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	GATA1	HGNC	ENSG00000102145	tier1	-	-	35	0	0.00	30	5	14.29
GATA1	0	genome.wustl.edu	37	X	48652484	48652484	+	Silent	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	48652484	48652484	C	G	SNP	GATA1	ENST00000376670	human	ensembl	74_37	+1	known	silent	c.1155	p.P385	0.001	pirsf_TF_GATA-1/2/3	pfam_Znf_GATA,smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	GATA1	HGNC	ENSG00000102145	tier1	-	-	45	0	0.00	30	5	14.29
GBP7	0	genome.wustl.edu	37	1	89597890	89597890	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	89597890	89597890	T	G	SNP	GBP7	ENST00000294671	human	ensembl	74_37	-1	known	missense	c.1859	p.K620T	0.000	NULL	pfam_Guanylate-bd_N,pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C,superfamily_P-loop_NTPase	-	no_errors	GBP7	HGNC	ENSG00000213512				85	0	0.00	62	4	6.06
GCM2	0	genome.wustl.edu	37	6	10874965	10874965	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	10874965	10874965	A	T	SNP	GCM2	ENST00000379491	human	ensembl	74_37	-1	known	missense	c.784	p.S262T	0.970	NULL	pfam_Tscrpt_reg_GCM_motif,superfamily_Tscrpt_reg_GCM_motif,pfscan_Tscrpt_reg_GCM_motif	-	no_errors	GCM2	HGNC	ENSG00000124827				100	0	0.00	71	5	6.58
GDPD1	0	genome.wustl.edu	37	17	57344462	57344462	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	57344462	57344462	T	G	SNP	GDPD1	ENST00000284116	human	ensembl	74_37	+1	known	missense	c.637	p.F213V	1.000	pfam_GlyceroP-diester-Pdiesterase,superfamily_PLC-like_Pdiesterase_TIM-brl	pfam_GlyceroP-diester-Pdiesterase,superfamily_PLC-like_Pdiesterase_TIM-brl	-	no_errors	GDPD1	HGNC	ENSG00000153982	tier1	-	-	100	0	0.00	70	17	19.54
GDPD1	0	genome.wustl.edu	37	17	57344462	57344462	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	57344462	57344462	T	G	SNP	GDPD1	ENST00000284116	human	ensembl	74_37	+1	known	missense	c.637	p.F213V	1.000	pfam_GlyceroP-diester-Pdiesterase,superfamily_PLC-like_Pdiesterase_TIM-brl	pfam_GlyceroP-diester-Pdiesterase,superfamily_PLC-like_Pdiesterase_TIM-brl	-	no_errors	GDPD1	HGNC	ENSG00000153982	tier1	-	-	47	0	0.00	70	17	19.54
GFRA3	0	genome.wustl.edu	37	5	137593388	137593388	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	137593388	137593388	G	A	SNP	GFRA3	ENST00000274721	human	ensembl	74_37	-1	known	missense	c.725	p.P242L	0.714	NULL	pfam_GDNF/GAS1,smart_GDNF/GAS1,prints_GDNF_rcpt,prints_GDNF_rcpt_A3	-	no_errors	GFRA3	HGNC	ENSG00000146013	tier1	-	-	32	0	0.00	20	9	31.03
GJA5	0	genome.wustl.edu	37	1	147230937	147230937	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	147230937	147230937	T	C	SNP	GJA5	ENST00000271348	human	ensembl	74_37	-1	known	missense	c.410	p.E137G	1.000	NULL	pfam_Connexin_N,pfam_Connexin_CCC,smart_Connexin_N,prints_Connexin,prints_Connexin40	-	no_errors	GJA5	HGNC	ENSG00000143140				40	0	0.00	18	3	14.29
GLMN	0	genome.wustl.edu	37	1	92730170	92730170	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	92730170	92730170	A	T	SNP	GLMN	ENST00000370360	human	ensembl	74_37	-1	known	missense	c.1240	p.S414T	1.000	pfam_YAP-bd/Alf4/glomulin	pfam_YAP-bd/Alf4/glomulin	-	no_errors	GLMN	HGNC	ENSG00000174842	tier1	-	-	39	0	0.00	48	9	15.79
GLMN	0	genome.wustl.edu	37	1	92730170	92730170	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	92730170	92730170	A	T	SNP	GLMN	ENST00000370360	human	ensembl	74_37	-1	known	missense	c.1240	p.S414T	1.000	pfam_YAP-bd/Alf4/glomulin	pfam_YAP-bd/Alf4/glomulin	-	no_errors	GLMN	HGNC	ENSG00000174842	tier1	-	-	82	0	0.00	48	9	15.79
GLRB	0	genome.wustl.edu	37	4	158091619	158091619	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	158091619	158091619	T	C	SNP	GLRB	ENST00000512619	human	ensembl	74_37	+1	putative	missense	c.158	p.L53P	0.044	NULL	NULL	-	no_errors	GLRB	HGNC	ENSG00000109738				50	0	0.00	42	3	6.52
GMEB1	0	genome.wustl.edu	37	1	29041385	29041386	+	RNA	INS	-	-	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	29041385	29041386	-	A	INS	GMEB1	ENST00000480454	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.437:0.252	-	-	-	no_errors	GMEB1	HGNC	ENSG00000162419	tier1			48	0	0.00	55	5	8.33
GNAI3	0	genome.wustl.edu	37	1	110128893	110128893	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	110128893	110128893	G	A	SNP	GNAI3	ENST00000369851	human	ensembl	74_37	+1	known	missense	c.646	p.E216K	1.000	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su,prints_Gprotein_alpha_I,prints_Fungi_Gprotein_alpha	-	no_errors	GNAI3	HGNC	ENSG00000065135	tier1	-	-	45	0	0.00	37	5	11.90
GNAI3	0	genome.wustl.edu	37	1	110128893	110128893	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	110128893	110128893	G	A	SNP	GNAI3	ENST00000369851	human	ensembl	74_37	+1	known	missense	c.646	p.E216K	1.000	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su,prints_Gprotein_alpha_I,prints_Fungi_Gprotein_alpha	-	no_errors	GNAI3	HGNC	ENSG00000065135	tier1	-	-	83	0	0.00	37	5	11.90
GNN	0	genome.wustl.edu	37	12	104283377	104283377	+	RNA	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	104283377	104283377	G	T	SNP	GNN	ENST00000548520	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.806	-	-	-	no_errors	RP11-642P15.1	Clone_based_vega_gene	ENSG00000214198	tier1	-	-	34	0	0.00	21	4	16.00
GPAA1	0	genome.wustl.edu	37	8	145139755	145139755	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	145139755	145139755	T	C	SNP	GPAA1	ENST00000355091	human	ensembl	74_37	+1	known	silent	c.1141	p.L381	1.000	pfam_Gaa1,pirsf_GPI_prot_transamidse_cplx_GAA1	pfam_Gaa1,pirsf_GPI_prot_transamidse_cplx_GAA1	-	no_errors	GPAA1	HGNC	ENSG00000197858	tier1	-	-	41	0	0.00	22	15	40.54
GPAA1	0	genome.wustl.edu	37	8	145139755	145139755	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	145139755	145139755	T	C	SNP	GPAA1	ENST00000355091	human	ensembl	74_37	+1	known	silent	c.1141	p.L381	1.000	pfam_Gaa1,pirsf_GPI_prot_transamidse_cplx_GAA1	pfam_Gaa1,pirsf_GPI_prot_transamidse_cplx_GAA1	-	no_errors	GPAA1	HGNC	ENSG00000197858	tier1	-	-	46	0	0.00	22	15	40.54
GPR34	0	genome.wustl.edu	37	X	41555683	41555683	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	41555683	41555683	G	A	SNP	GPR34	ENST00000378138	human	ensembl	74_37	+1	known	missense	c.797	p.R266H	0.970	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR34	HGNC	ENSG00000171659	tier1	-	-	25	0	0.00	8	21	72.41
GPR34	0	genome.wustl.edu	37	X	41555683	41555683	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	41555683	41555683	G	A	SNP	GPR34	ENST00000378138	human	ensembl	74_37	+1	known	missense	c.797	p.R266H	0.970	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR34	HGNC	ENSG00000171659	tier1	-	-	33	0	0.00	8	21	72.41
GPR37	0	genome.wustl.edu	37	7	124404500	124404500	+	Silent	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	124404500	124404500	G	A	SNP	GPR37	ENST00000303921	human	ensembl	74_37	-1	known	silent	c.531	p.S177	0.005	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPR37_orph,prints_GPCR_Rhodpsn	-	no_errors	GPR37	HGNC	ENSG00000170775				121	0	0.00	68	4	5.56
GPR55	0	genome.wustl.edu	37	2	231775283	231775283	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	231775283	231775283	A	G	SNP	GPR55	ENST00000392039	human	ensembl	74_37	-1	known	missense	c.395	p.L132P	0.991	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	GPR55	HGNC	ENSG00000135898	tier1	-	-	53	0	0.00	32	12	27.27
GPR55	0	genome.wustl.edu	37	2	231775283	231775283	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	231775283	231775283	A	G	SNP	GPR55	ENST00000392039	human	ensembl	74_37	-1	known	missense	c.395	p.L132P	0.991	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	GPR55	HGNC	ENSG00000135898	tier1	-	-	59	0	0.00	32	12	27.27
GRIA4	0	genome.wustl.edu	37	11	105795332	105795332	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	105795332	105795332	T	G	SNP	GRIA4	ENST00000282499	human	ensembl	74_37	+1	known	missense	c.1684	p.L562V	1.000	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIA4	HGNC	ENSG00000152578	tier1	-	-	32	0	0.00	22	7	24.14
GRIA4	0	genome.wustl.edu	37	11	105795332	105795332	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	105795332	105795332	T	G	SNP	GRIA4	ENST00000282499	human	ensembl	74_37	+1	known	missense	c.1684	p.L562V	1.000	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIA4	HGNC	ENSG00000152578	tier1	-	-	39	0	0.00	22	7	24.14
GRID2	0	genome.wustl.edu	37	4	94343959	94343959	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	94343959	94343959	G	A	SNP	GRID2	ENST00000282020	human	ensembl	74_37	+1	known	missense	c.1385	p.G462D	1.000	pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd	pfam_Iontro_glu_rcpt,pfam_ANF_lig-bd_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRID2	HGNC	ENSG00000152208	tier1	-	-	112	0	0.00	63	18	22.22
GRID2	0	genome.wustl.edu	37	4	94343959	94343959	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	94343959	94343959	G	A	SNP	GRID2	ENST00000282020	human	ensembl	74_37	+1	known	missense	c.1385	p.G462D	1.000	pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd	pfam_Iontro_glu_rcpt,pfam_ANF_lig-bd_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRID2	HGNC	ENSG00000152208	tier1	-	-	58	0	0.00	63	18	22.22
GRIP2	0	genome.wustl.edu	37	3	14530733	14530733	+	RNA	DEL	T	T	-			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	14530733	14530733	T	-	DEL	GRIP2	ENST00000273083	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GRIP2	HGNC	ENSG00000144596	tier1			33	0	0.00	36	10	21.74
GRIP2	0	genome.wustl.edu	37	3	14530733	14530733	+	RNA	DEL	T	T	-			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	14530733	14530733	T	-	DEL	GRIP2	ENST00000273083	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GRIP2	HGNC	ENSG00000144596	tier1			68	0	0.00	36	10	21.74
GTF2IRD2P1	0	genome.wustl.edu	37	7	72663998	72663998	+	RNA	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	72663998	72663998	T	G	SNP	GTF2IRD2P1	ENST00000425256	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	GTF2IRD2P1	HGNC	ENSG00000214544	tier1	-	-	54	0	0.00	42	4	8.70
GTF2IRD2P1	0	genome.wustl.edu	37	7	72664015	72664016	+	RNA	INS	-	-	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	72664015	72664016	-	G	INS	GTF2IRD2P1	ENST00000425256	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.912:0.964	-	-	-	no_errors	GTF2IRD2P1	HGNC	ENSG00000214544	tier1			17	0	0.00	20	4	16.67
GUCA1C	0	genome.wustl.edu	37	3	108626976	108626976	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	108626976	108626976	A	C	SNP	GUCA1C	ENST00000261047	human	ensembl	74_37	-1	known	missense	c.523	p.F175V	0.220	NULL	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	-	no_errors	GUCA1C	HGNC	ENSG00000138472	tier1	-	-	55	0	0.00	40	27	40.30
GUCA1C	0	genome.wustl.edu	37	3	108626976	108626976	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	108626976	108626976	A	C	SNP	GUCA1C	ENST00000261047	human	ensembl	74_37	-1	known	missense	c.523	p.F175V	0.220	NULL	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	-	no_errors	GUCA1C	HGNC	ENSG00000138472	tier1	-	-	63	0	0.00	40	27	40.30
GUSBP5	0	genome.wustl.edu	37	4	144481247	144481247	+	RNA	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	144481247	144481247	A	G	SNP	GUSBP5	ENST00000509369	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.027	-	-	-	no_errors	GUSBP5	HGNC	ENSG00000236296	tier1	-	-	52	0	0.00	36	7	16.28
GUSBP5	0	genome.wustl.edu	37	4	144481247	144481247	+	RNA	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	144481247	144481247	A	G	SNP	GUSBP5	ENST00000509369	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.027	-	-	-	no_errors	GUSBP5	HGNC	ENSG00000236296	tier1	-	-	54	0	0.00	36	7	16.28
HCN1	0	genome.wustl.edu	37	5	45262548	45262548	+	Silent	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	45262548	45262548	A	T	SNP	HCN1	ENST00000303230	human	ensembl	74_37	-1	known	silent	c.2148	p.T716	1.000	NULL	pfam_Ion_trans_N,pfam_cNMP-bd_dom,pfam_Ion_trans_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG	-	no_errors	HCN1	HGNC	ENSG00000164588	tier1	-	-	70	0	0.00	50	5	9.09
HCN1	0	genome.wustl.edu	37	5	45262548	45262548	+	Silent	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	45262548	45262548	A	T	SNP	HCN1	ENST00000303230	human	ensembl	74_37	-1	known	silent	c.2148	p.T716	1.000	NULL	pfam_Ion_trans_N,pfam_cNMP-bd_dom,pfam_Ion_trans_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG	-	no_errors	HCN1	HGNC	ENSG00000164588	tier1	-	-	73	0	0.00	50	5	9.09
HDGFRP3	0	genome.wustl.edu	37	15	83826671	83826671	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	83826671	83826671	T	G	SNP	HDGFRP3	ENST00000299633	human	ensembl	74_37	-1	known	missense	c.284	p.K95T	1.000	NULL	pfam_PWWP_dom,smart_PWWP_dom,pfscan_PWWP_dom	-	no_errors	HDGFRP3	Uniprot_gn	ENSG00000166503	tier1	-	-	42	0	0.00	39	8	17.02
HDGFRP3	0	genome.wustl.edu	37	15	83826671	83826671	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	83826671	83826671	T	G	SNP	HDGFRP3	ENST00000299633	human	ensembl	74_37	-1	known	missense	c.284	p.K95T	1.000	NULL	pfam_PWWP_dom,smart_PWWP_dom,pfscan_PWWP_dom	-	no_errors	HDGFRP3	Uniprot_gn	ENSG00000166503	tier1	-	-	48	0	0.00	39	8	17.02
HDLBP	0	genome.wustl.edu	37	2	242186238	242186238	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	242186238	242186238	T	A	SNP	HDLBP	ENST00000310931	human	ensembl	74_37	-1	known	missense	c.1879	p.I627F	0.998	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	HDLBP	HGNC	ENSG00000115677	tier1	-	-	51	0	0.00	40	14	25.93
HDLBP	0	genome.wustl.edu	37	2	242186238	242186238	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	242186238	242186238	T	A	SNP	HDLBP	ENST00000310931	human	ensembl	74_37	-1	known	missense	c.1879	p.I627F	0.998	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	HDLBP	HGNC	ENSG00000115677	tier1	-	-	72	0	0.00	40	14	25.93
HEATR5B	0	genome.wustl.edu	37	2	37295884	37295884	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	37295884	37295884	C	A	SNP	HEATR5B	ENST00000233099	human	ensembl	74_37	-1	known	missense	c.1117	p.A373S	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	HEATR5B	HGNC	ENSG00000008869	tier1	-	-	75	0	0.00	67	18	20.93
HEATR5B	0	genome.wustl.edu	37	2	37295884	37295884	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	37295884	37295884	C	A	SNP	HEATR5B	ENST00000233099	human	ensembl	74_37	-1	known	missense	c.1117	p.A373S	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	HEATR5B	HGNC	ENSG00000008869	tier1	-	-	95	0	0.00	67	18	20.93
HECTD4	0	genome.wustl.edu	37	12	112672926	112672926	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	112672926	112672926	T	C	SNP	HECTD4	ENST00000377560	human	ensembl	74_37	-1	known	missense	c.5354	p.K1785R	1.000	NULL	pfam_HECT,superfamily_HECT,superfamily_ConA-like_lec_gl_sf,smart_HECT,pfscan_HECT	-	no_errors	HECTD4	HGNC	ENSG00000173064	tier1	-	-	67	0	0.00	64	7	9.86
HECTD4	0	genome.wustl.edu	37	12	112672926	112672926	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	112672926	112672926	T	C	SNP	HECTD4	ENST00000377560	human	ensembl	74_37	-1	known	missense	c.5354	p.K1785R	1.000	NULL	pfam_HECT,superfamily_HECT,superfamily_ConA-like_lec_gl_sf,smart_HECT,pfscan_HECT	-	no_errors	HECTD4	HGNC	ENSG00000173064	tier1	-	-	89	0	0.00	64	7	9.86
HECTD4	0	genome.wustl.edu	37	12	112690287	112690287	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	112690287	112690287	G	T	SNP	HECTD4	ENST00000377560	human	ensembl	74_37	-1	known	missense	c.2977	p.R993S	1.000	NULL	pfam_HECT,superfamily_HECT,superfamily_ConA-like_lec_gl_sf,smart_HECT,pfscan_HECT	-	no_errors	HECTD4	HGNC	ENSG00000173064				65	0	0.00	41	3	6.82
HERC1	0	genome.wustl.edu	37	15	64005604	64005604	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	64005604	64005604	G	A	SNP	HERC1	ENST00000443617	human	ensembl	74_37	-1	known	nonsense	c.4411	p.Q1471*	1.000	NULL	pfam_Reg_chr_condens,pfam_HECT,pfam_WD40_repeat,pfam_SPRY_rcpt,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_WD40_repeat_dom,superfamily_ConA-like_lec_gl_sf,superfamily_UBA-like,superfamily_ARM-type_fold,smart_SPla/RYanodine_receptor_subgr,smart_WD40_repeat,smart_HECT,pfscan_B30.2/SPRY,pfscan_HECT,pfscan_Reg_chr_condens,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Reg_chr_condens	-	no_errors	HERC1	HGNC	ENSG00000103657	tier1	-	-	44	0	0.00	26	6	18.18
HERC1	0	genome.wustl.edu	37	15	64005604	64005604	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	64005604	64005604	G	A	SNP	HERC1	ENST00000443617	human	ensembl	74_37	-1	known	nonsense	c.4411	p.Q1471*	1.000	NULL	pfam_Reg_chr_condens,pfam_HECT,pfam_WD40_repeat,pfam_SPRY_rcpt,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_WD40_repeat_dom,superfamily_ConA-like_lec_gl_sf,superfamily_UBA-like,superfamily_ARM-type_fold,smart_SPla/RYanodine_receptor_subgr,smart_WD40_repeat,smart_HECT,pfscan_B30.2/SPRY,pfscan_HECT,pfscan_Reg_chr_condens,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Reg_chr_condens	-	no_errors	HERC1	HGNC	ENSG00000103657	tier1	-	-	54	0	0.00	26	6	18.18
HERC2P4	0	genome.wustl.edu	37	16	32186860	32186860	+	RNA	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	32186860	32186860	G	T	SNP	HERC2P4	ENST00000566591	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HERC2P4	HGNC	ENSG00000230267	tier1	-	-	127	0	0.00	76	18	19.15
HERC2P4	0	genome.wustl.edu	37	16	32186860	32186860	+	RNA	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	32186860	32186860	G	T	SNP	HERC2P4	ENST00000566591	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HERC2P4	HGNC	ENSG00000230267	tier1	-	-	178	0	0.00	76	18	19.15
HFE2	0	genome.wustl.edu	37	1	145415834	145415834	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	145415834	145415834	G	A	SNP	HFE2	ENST00000336751	human	ensembl	74_37	+1	known	missense	c.653	p.R218Q	0.982	pfam_RGM_N	pfam_RGM_N,pfam_RGM_C	-	no_errors	HFE2	HGNC	ENSG00000168509	tier1	-	-	21	0	0.00	15	10	40.00
HFE2	0	genome.wustl.edu	37	1	145415834	145415834	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	145415834	145415834	G	A	SNP	HFE2	ENST00000336751	human	ensembl	74_37	+1	known	missense	c.653	p.R218Q	0.982	pfam_RGM_N	pfam_RGM_N,pfam_RGM_C	-	no_errors	HFE2	HGNC	ENSG00000168509	tier1	-	-	22	0	0.00	15	10	40.00
HFM1	0	genome.wustl.edu	37	1	91816414	91816414	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	91816414	91816414	A	C	SNP	HFM1	ENST00000370425	human	ensembl	74_37	-1	known	missense	c.2087	p.L696R	1.000	pfscan_Helicase_C	pfam_Sec63-dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Sec63-dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	HFM1	HGNC	ENSG00000162669	tier1	-	-	29	0	0.00	21	5	19.23
HFM1	0	genome.wustl.edu	37	1	91816414	91816414	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	91816414	91816414	A	C	SNP	HFM1	ENST00000370425	human	ensembl	74_37	-1	known	missense	c.2087	p.L696R	1.000	pfscan_Helicase_C	pfam_Sec63-dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Sec63-dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	HFM1	HGNC	ENSG00000162669	tier1	-	-	54	0	0.00	21	5	19.23
HIC2	0	genome.wustl.edu	37	22	21800741	21800741	+	Silent	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	22	21800741	21800741	G	T	SNP	HIC2	ENST00000407464	human	ensembl	74_37	+1	known	silent	c.1557	p.T519	0.281	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	HIC2	HGNC	ENSG00000169635	tier1	-	-	105	0	0.00	45	12	21.05
HIC2	0	genome.wustl.edu	37	22	21800741	21800741	+	Silent	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	22	21800741	21800741	G	T	SNP	HIC2	ENST00000407464	human	ensembl	74_37	+1	known	silent	c.1557	p.T519	0.281	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	HIC2	HGNC	ENSG00000169635	tier1	-	-	123	0	0.00	45	12	21.05
HIST1H2BI	0	genome.wustl.edu	37	6	26273373	26273373	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	26273373	26273373	C	G	SNP	HIST1H2BI	ENST00000377733	human	ensembl	74_37	+1	known	missense	c.170	p.S57C	1.000	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	-	no_errors	HIST1H2BI	HGNC	ENSG00000168242	tier1	-	-	153	0	0.00	145	47	24.35
HIST1H2BI	0	genome.wustl.edu	37	6	26273373	26273373	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	26273373	26273373	C	G	SNP	HIST1H2BI	ENST00000377733	human	ensembl	74_37	+1	known	missense	c.170	p.S57C	1.000	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	-	no_errors	HIST1H2BI	HGNC	ENSG00000168242	tier1	-	-	186	0	0.00	145	47	24.35
HLA-DQA2	0	genome.wustl.edu	37	6	32713088	32713088	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	32713088	32713088	A	C	SNP	HLA-DQA2	ENST00000374940	human	ensembl	74_37	+1	known	missense	c.235	p.S79R	0.001	pfam_MHC_II_a_N,superfamily_MHC_I/II-like_Ag-recog,smart_MHC_II_a_N	pfam_MHC_II_a_N,pfam_Ig_C1-set,pfam_CD80_C2-set,superfamily_MHC_I/II-like_Ag-recog,smart_MHC_II_a_N,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	HLA-DQA2	HGNC	ENSG00000237541	tier1	-	-	102	0	0.00	49	5	9.26
HLA-DQA2	0	genome.wustl.edu	37	6	32713088	32713088	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	32713088	32713088	A	C	SNP	HLA-DQA2	ENST00000374940	human	ensembl	74_37	+1	known	missense	c.235	p.S79R	0.001	pfam_MHC_II_a_N,superfamily_MHC_I/II-like_Ag-recog,smart_MHC_II_a_N	pfam_MHC_II_a_N,pfam_Ig_C1-set,pfam_CD80_C2-set,superfamily_MHC_I/II-like_Ag-recog,smart_MHC_II_a_N,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	HLA-DQA2	HGNC	ENSG00000237541	tier1	-	-	91	0	0.00	49	5	9.26
HMCN1	0	genome.wustl.edu	37	1	185988735	185988735	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	185988735	185988735	G	A	SNP	HMCN1	ENST00000271588	human	ensembl	74_37	+1	known	missense	c.5533	p.A1845T	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	HMCN1	HGNC	ENSG00000143341	tier1	-	-	48	0	0.00	32	23	41.82
HMCN1	0	genome.wustl.edu	37	1	185988735	185988735	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	185988735	185988735	G	A	SNP	HMCN1	ENST00000271588	human	ensembl	74_37	+1	known	missense	c.5533	p.A1845T	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	HMCN1	HGNC	ENSG00000143341	tier1	-	-	65	0	0.00	32	23	41.82
HMCN1	0	genome.wustl.edu	37	1	186083996	186083996	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	186083996	186083996	T	C	SNP	HMCN1	ENST00000271588	human	ensembl	74_37	+1	known	silent	c.11322	p.H3774	0.784	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	HMCN1	HGNC	ENSG00000143341	tier1	-	-	59	0	0.00	75	5	6.25
HMCN1	0	genome.wustl.edu	37	1	186083996	186083996	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	186083996	186083996	T	C	SNP	HMCN1	ENST00000271588	human	ensembl	74_37	+1	known	silent	c.11322	p.H3774	0.784	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	HMCN1	HGNC	ENSG00000143341	tier1	-	-	77	0	0.00	75	5	6.25
HNRNPUL1	0	genome.wustl.edu	37	19	41777994	41777994	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	41777994	41777994	G	T	SNP	HNRNPUL1	ENST00000392006	human	ensembl	74_37	+1	known	missense	c.426	p.K142N	1.000	NULL	pfam_SPRY_rcpt,pfam_SAP_dom,superfamily_ConA-like_lec_gl_sf,superfamily_P-loop_NTPase,smart_SAP_dom,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_SAP_dom	-	no_errors	HNRNPUL1	HGNC	ENSG00000105323	tier1	-	-	58	0	0.00	56	4	6.67
HNRNPUL1	0	genome.wustl.edu	37	19	41777994	41777994	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	41777994	41777994	G	T	SNP	HNRNPUL1	ENST00000392006	human	ensembl	74_37	+1	known	missense	c.426	p.K142N	1.000	NULL	pfam_SPRY_rcpt,pfam_SAP_dom,superfamily_ConA-like_lec_gl_sf,superfamily_P-loop_NTPase,smart_SAP_dom,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_SAP_dom	-	no_errors	HNRNPUL1	HGNC	ENSG00000105323	tier1	-	-	78	0	0.00	56	4	6.67
HORMAD1	0	genome.wustl.edu	37	1	150691959	150691959	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	150691959	150691959	C	G	SNP	HORMAD1	ENST00000361824	human	ensembl	74_37	-1	known	missense	c.23	p.R8T	1.000	NULL	pfam_HORMA_DNA-bd,superfamily_HORMA_DNA-bd,pfscan_HORMA_DNA-bd	-	no_errors	HORMAD1	HGNC	ENSG00000143452	tier1	-	-	53	0	0.00	31	15	32.61
HORMAD1	0	genome.wustl.edu	37	1	150691959	150691959	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	150691959	150691959	C	G	SNP	HORMAD1	ENST00000361824	human	ensembl	74_37	-1	known	missense	c.23	p.R8T	1.000	NULL	pfam_HORMA_DNA-bd,superfamily_HORMA_DNA-bd,pfscan_HORMA_DNA-bd	-	no_errors	HORMAD1	HGNC	ENSG00000143452	tier1	-	-	64	0	0.00	31	15	32.61
HOXB2	0	genome.wustl.edu	37	17	46622245	46622245	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	46622245	46622245	C	T	SNP	HOXB2	ENST00000330070	human	ensembl	74_37	-1	known	missense	c.29	p.G10E	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXB2	HGNC	ENSG00000173917	tier1	-	-	251	0	0.00	132	30	18.52
HOXB2	0	genome.wustl.edu	37	17	46622245	46622245	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	46622245	46622245	C	T	SNP	HOXB2	ENST00000330070	human	ensembl	74_37	-1	known	missense	c.29	p.G10E	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXB2	HGNC	ENSG00000173917	tier1	-	-	266	0	0.00	132	30	18.52
HRNR	0	genome.wustl.edu	37	1	152191663	152191663	+	Silent	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	152191663	152191663	A	C	SNP	HRNR	ENST00000368801	human	ensembl	74_37	-1	known	silent	c.2442	p.A814	0.008	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom	-	no_errors	HRNR	HGNC	ENSG00000197915	tier1	-	-	126	0	0.00	92	5	5.15
HRNR	0	genome.wustl.edu	37	1	152191663	152191663	+	Silent	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	152191663	152191663	A	C	SNP	HRNR	ENST00000368801	human	ensembl	74_37	-1	known	silent	c.2442	p.A814	0.008	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom	-	no_errors	HRNR	HGNC	ENSG00000197915	tier1	-	-	93	0	0.00	92	5	5.15
HSD17B14	0	genome.wustl.edu	37	19	49335011	49335011	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	49335011	49335011	G	T	SNP	HSD17B14	ENST00000263278	human	ensembl	74_37	-1	known	missense	c.283	p.P95T	0.017	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,pfam_Epimerase_deHydtase	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,pfam_Epimerase_deHydtase,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR,prints_DHB_DH	-	no_errors	HSD17B14	HGNC	ENSG00000087076				79	0	0.00	62	4	6.06
HYDIN	0	genome.wustl.edu	37	16	70993683	70993683	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	70993683	70993683	T	G	SNP	HYDIN	ENST00000393567	human	ensembl	74_37	-1	putative	missense	c.6009	p.E2003D	0.990	NULL	superfamily_P-loop_NTPase,superfamily_PapD-like	-	no_errors	HYDIN	HGNC	ENSG00000157423	tier1	-	-	33	0	0.00	20	5	20.00
HYDIN	0	genome.wustl.edu	37	16	70993683	70993683	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	70993683	70993683	T	G	SNP	HYDIN	ENST00000393567	human	ensembl	74_37	-1	putative	missense	c.6009	p.E2003D	0.990	NULL	superfamily_P-loop_NTPase,superfamily_PapD-like	-	no_errors	HYDIN	HGNC	ENSG00000157423	tier1	-	-	39	0	0.00	20	5	20.00
HYOU1	0	genome.wustl.edu	37	11	118922539	118922539	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	118922539	118922539	G	A	SNP	HYOU1	ENST00000404233	human	ensembl	74_37	-1	known	missense	c.1330	p.P444S	1.000	pfam_Hsp_70_fam	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HYOU1	HGNC	ENSG00000149428	tier1	-	-	72	0	0.00	26	17	39.53
HYOU1	0	genome.wustl.edu	37	11	118922539	118922539	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	118922539	118922539	G	A	SNP	HYOU1	ENST00000404233	human	ensembl	74_37	-1	known	missense	c.1330	p.P444S	1.000	pfam_Hsp_70_fam	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HYOU1	HGNC	ENSG00000149428	tier1	-	-	79	0	0.00	26	17	39.53
IBSP	0	genome.wustl.edu	37	4	88731763	88731763	+	Silent	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	88731763	88731763	T	G	SNP	IBSP	ENST00000226284	human	ensembl	74_37	+1	known	silent	c.252	p.T84	1.000	pfam_BSP_II	pfam_BSP_II	-	no_errors	IBSP	HGNC	ENSG00000029559	tier1	-	-	100	0	0.00	57	25	30.49
IBSP	0	genome.wustl.edu	37	4	88731763	88731763	+	Silent	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	88731763	88731763	T	G	SNP	IBSP	ENST00000226284	human	ensembl	74_37	+1	known	silent	c.252	p.T84	1.000	pfam_BSP_II	pfam_BSP_II	-	no_errors	IBSP	HGNC	ENSG00000029559	tier1	-	-	79	0	0.00	57	25	30.49
IGSF1	0	genome.wustl.edu	37	X	130417080	130417080	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	130417080	130417080	T	G	SNP	IGSF1	ENST00000370903	human	ensembl	74_37	-1	known	missense	c.826	p.K276Q	0.576	smart_Ig_sub	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	IGSF1	HGNC	ENSG00000147255	tier1	-	-	37	0	0.00	13	30	69.77
IGSF1	0	genome.wustl.edu	37	X	130417080	130417080	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	130417080	130417080	T	G	SNP	IGSF1	ENST00000370903	human	ensembl	74_37	-1	known	missense	c.826	p.K276Q	0.576	smart_Ig_sub	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	IGSF1	HGNC	ENSG00000147255	tier1	-	-	63	0	0.00	13	30	69.77
IGSF10	0	genome.wustl.edu	37	3	151165478	151165478	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	151165478	151165478	T	G	SNP	IGSF10	ENST00000282466	human	ensembl	74_37	-1	known	missense	c.2291	p.K764T	1.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	IGSF10	HGNC	ENSG00000152580	tier1	-	-	53	0	0.00	41	7	14.58
IGSF10	0	genome.wustl.edu	37	3	151165478	151165478	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	151165478	151165478	T	G	SNP	IGSF10	ENST00000282466	human	ensembl	74_37	-1	known	missense	c.2291	p.K764T	1.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	IGSF10	HGNC	ENSG00000152580	tier1	-	-	61	0	0.00	41	7	14.58
IL1RL1	0	genome.wustl.edu	37	2	102959851	102959851	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	102959851	102959851	G	A	SNP	IL1RL1	ENST00000233954	human	ensembl	74_37	+1	known	missense	c.946	p.V316I	0.000	smart_Ig_sub,pfscan_Ig-like_dom	pfam_TIR_dom,pfam_Ig_I-set,superfamily_TIR_dom,smart_Ig_sub,smart_Ig_sub2,smart_TIR_dom,prints_IL-1_rcpt_I/II-typ,pfscan_TIR_dom,pfscan_Ig-like_dom	-	no_errors	IL1RL1	HGNC	ENSG00000115602	tier1	-	-	41	0	0.00	38	9	19.15
INCENP	0	genome.wustl.edu	37	11	61896307	61896307	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	61896307	61896307	G	A	SNP	INCENP	ENST00000394818	human	ensembl	74_37	+1	known	missense	c.206	p.R69K	0.994	NULL	pfam_INCENP_N,pfam_Inner_centromere_prot_ARK-bd	-	no_errors	INCENP	HGNC	ENSG00000149503	tier1	-	-	70	0	0.00	47	13	21.67
INCENP	0	genome.wustl.edu	37	11	61896307	61896307	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	61896307	61896307	G	A	SNP	INCENP	ENST00000394818	human	ensembl	74_37	+1	known	missense	c.206	p.R69K	0.994	NULL	pfam_INCENP_N,pfam_Inner_centromere_prot_ARK-bd	-	no_errors	INCENP	HGNC	ENSG00000149503	tier1	-	-	89	0	0.00	47	13	21.67
INPP5F	0	genome.wustl.edu	37	10	121557109	121557109	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	121557109	121557109	C	A	SNP	INPP5F	ENST00000361976	human	ensembl	74_37	+1	known	missense	c.1005	p.S335R	1.000	pfam_Syja_N,pfscan_Syja_N	pfam_Syja_N,pfam_Inositol_phosphatase,pfscan_Syja_N	-	no_errors	INPP5F	HGNC	ENSG00000198825	tier1	-	-	42	0	0.00	32	18	36.00
INPP5F	0	genome.wustl.edu	37	10	121557109	121557109	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	121557109	121557109	C	A	SNP	INPP5F	ENST00000361976	human	ensembl	74_37	+1	known	missense	c.1005	p.S335R	1.000	pfam_Syja_N,pfscan_Syja_N	pfam_Syja_N,pfam_Inositol_phosphatase,pfscan_Syja_N	-	no_errors	INPP5F	HGNC	ENSG00000198825	tier1	-	-	66	0	0.00	32	18	36.00
INSIG1	0	genome.wustl.edu	37	7	155090010	155090010	+	Silent	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	155090010	155090010	C	T	SNP	INSIG1	ENST00000340368	human	ensembl	74_37	+1	known	silent	c.15	p.H5	1.000	NULL	pfam_INSIG_fam	-	no_errors	INSIG1	HGNC	ENSG00000186480	tier1	-	-	110	0	0.00	50	6	10.71
IRGQ	0	genome.wustl.edu	37	19	44099419	44099419	+	Silent	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	44099419	44099419	G	A	SNP	IRGQ	ENST00000422989	human	ensembl	74_37	-1	known	silent	c.72	p.I24	0.009	superfamily_P-loop_NTPase	superfamily_P-loop_NTPase	-	no_errors	IRGQ	HGNC	ENSG00000167378	tier1	-	-	138	0	0.00	63	26	28.89
IRGQ	0	genome.wustl.edu	37	19	44099419	44099419	+	Silent	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	44099419	44099419	G	A	SNP	IRGQ	ENST00000422989	human	ensembl	74_37	-1	known	silent	c.72	p.I24	0.009	superfamily_P-loop_NTPase	superfamily_P-loop_NTPase	-	no_errors	IRGQ	HGNC	ENSG00000167378	tier1	-	-	145	0	0.00	63	26	28.89
ISLR	0	genome.wustl.edu	37	15	74467812	74467812	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	74467812	74467812	C	A	SNP	ISLR	ENST00000249842	human	ensembl	74_37	+1	known	missense	c.613	p.Q205K	0.052	smart_Cys-rich_flank_reg_C	pfam_Leu-rich_rpt,pfam_Ig_I-set,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	ISLR	HGNC	ENSG00000129009	tier1	-	-	46	0	0.00	26	9	25.71
ISLR	0	genome.wustl.edu	37	15	74467812	74467812	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	74467812	74467812	C	A	SNP	ISLR	ENST00000249842	human	ensembl	74_37	+1	known	missense	c.613	p.Q205K	0.052	smart_Cys-rich_flank_reg_C	pfam_Leu-rich_rpt,pfam_Ig_I-set,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	ISLR	HGNC	ENSG00000129009	tier1	-	-	70	0	0.00	26	9	25.71
ITPKC	0	genome.wustl.edu	37	19	41223895	41223895	+	Silent	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	41223895	41223895	C	A	SNP	ITPKC	ENST00000263370	human	ensembl	74_37	+1	known	silent	c.855	p.S285	0.038	NULL	pfam_IPK	-	no_errors	ITPKC	HGNC	ENSG00000086544				145	0	0.00	82	5	5.75
ITPR1	0	genome.wustl.edu	37	3	4704812	4704812	+	Silent	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	4704812	4704812	A	G	SNP	ITPR1	ENST00000302640	human	ensembl	74_37	+1	known	silent	c.1431	p.Q477	1.000	pfam_Ca-rel_channel	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR1	HGNC	ENSG00000150995	tier1	-	-	120	0	0.00	71	7	8.97
ITPR1	0	genome.wustl.edu	37	3	4704812	4704812	+	Silent	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	4704812	4704812	A	G	SNP	ITPR1	ENST00000302640	human	ensembl	74_37	+1	known	silent	c.1431	p.Q477	1.000	pfam_Ca-rel_channel	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR1	HGNC	ENSG00000150995	tier1	-	-	71	0	0.00	71	7	8.97
ITSN1	0	genome.wustl.edu	37	21	35195800	35195800	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	21	35195800	35195800	C	T	SNP	ITSN1	ENST00000381285	human	ensembl	74_37	+1	known	missense	c.3026	p.A1009V	1.000	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_SH3_domain,pfam_SH3_2,pfam_DH-domain,pfam_C2_dom,superfamily_DH-domain,superfamily_C2_dom,superfamily_SH3_domain,superfamily_P-loop_NTPase,smart_EPS15_homology,smart_EF_hand_dom,smart_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,smart_C2_dom,pfscan_EF_hand_dom,pfscan_EPS15_homology,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain,prints_SH3_domain,prints_p67phox	-	no_errors	ITSN1	HGNC	ENSG00000205726	tier1	-	-	82	0	0.00	44	31	40.79
ITSN1	0	genome.wustl.edu	37	21	35229051	35229051	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	21	35229051	35229051	T	A	SNP	ITSN1	ENST00000381285	human	ensembl	74_37	+1	known	missense	c.3673	p.L1225I	0.998	superfamily_DH-domain	pfam_SH3_domain,pfam_SH3_2,pfam_DH-domain,pfam_C2_dom,superfamily_DH-domain,superfamily_C2_dom,superfamily_SH3_domain,superfamily_P-loop_NTPase,smart_EPS15_homology,smart_EF_hand_dom,smart_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,smart_C2_dom,pfscan_EF_hand_dom,pfscan_EPS15_homology,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain,prints_SH3_domain,prints_p67phox	-	no_errors	ITSN1	HGNC	ENSG00000205726	tier1	-	-	108	0	0.00	73	6	7.59
ITSN1	0	genome.wustl.edu	37	21	35229051	35229051	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	21	35229051	35229051	T	A	SNP	ITSN1	ENST00000381285	human	ensembl	74_37	+1	known	missense	c.3673	p.L1225I	0.998	superfamily_DH-domain	pfam_SH3_domain,pfam_SH3_2,pfam_DH-domain,pfam_C2_dom,superfamily_DH-domain,superfamily_C2_dom,superfamily_SH3_domain,superfamily_P-loop_NTPase,smart_EPS15_homology,smart_EF_hand_dom,smart_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,smart_C2_dom,pfscan_EF_hand_dom,pfscan_EPS15_homology,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain,prints_SH3_domain,prints_p67phox	-	no_errors	ITSN1	HGNC	ENSG00000205726	tier1	-	-	113	0	0.00	73	6	7.59
IYD	0	genome.wustl.edu	37	6	150716745	150716745	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	150716745	150716745	T	G	SNP	IYD	ENST00000500320	human	ensembl	74_37	+1	known	missense	c.842	p.F281C	0.991	NULL	pfam_Nitroreductase-like,superfamily_Nitroreductase-like	-	no_errors	IYD	HGNC	ENSG00000009765	tier1	-	-	22	0	0.00	9	14	60.87
IYD	0	genome.wustl.edu	37	6	150716745	150716745	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	150716745	150716745	T	G	SNP	IYD	ENST00000500320	human	ensembl	74_37	+1	known	missense	c.842	p.F281C	0.991	NULL	pfam_Nitroreductase-like,superfamily_Nitroreductase-like	-	no_errors	IYD	HGNC	ENSG00000009765	tier1	-	-	35	0	0.00	9	14	60.87
JAG2	0	genome.wustl.edu	37	14	105609380	105609380	+	Silent	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	105609380	105609380	G	A	SNP	JAG2	ENST00000331782	human	ensembl	74_37	-1	known	silent	c.3369	p.S1123	0.340	NULL	pfam_EG-like_dom,pfam_Notch_ligand_N,pfam_DSL,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,smart_DSL,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_VWC_out,smart_VWF_C,pfscan_DSL,pfscan_EG-like_dom,pfscan_VWF_C	-	no_errors	JAG2	HGNC	ENSG00000184916	tier1	rs138204105	-	11	0	0.00	6	4	40.00
JAG2	0	genome.wustl.edu	37	14	105609380	105609380	+	Silent	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	105609380	105609380	G	A	SNP	JAG2	ENST00000331782	human	ensembl	74_37	-1	known	silent	c.3369	p.S1123	0.340	NULL	pfam_EG-like_dom,pfam_Notch_ligand_N,pfam_DSL,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,smart_DSL,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_VWC_out,smart_VWF_C,pfscan_DSL,pfscan_EG-like_dom,pfscan_VWF_C	-	no_errors	JAG2	HGNC	ENSG00000184916	tier1	rs138204105	-	13	0	0.00	6	4	40.00
JAK3	0	genome.wustl.edu	37	19	17942140	17942140	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	17942140	17942140	T	G	SNP	JAK3	ENST00000458235	human	ensembl	74_37	-1	known	missense	c.2875	p.S959R	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_FERM_central,smart_Band_41_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,pfscan_FERM_domain,pfscan_Prot_kinase_dom,prints_Tyr_kinase_non-rcpt_Jak/Tyk2,prints_Tyr_kinase_non-rcpt_Jak3,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	JAK3	HGNC	ENSG00000105639	tier1	-	-	117	0	0.00	87	9	9.38
JAK3	0	genome.wustl.edu	37	19	17942140	17942140	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	17942140	17942140	T	G	SNP	JAK3	ENST00000458235	human	ensembl	74_37	-1	known	missense	c.2875	p.S959R	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_FERM_central,smart_Band_41_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,pfscan_FERM_domain,pfscan_Prot_kinase_dom,prints_Tyr_kinase_non-rcpt_Jak/Tyk2,prints_Tyr_kinase_non-rcpt_Jak3,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	JAK3	HGNC	ENSG00000105639	tier1	-	-	139	0	0.00	87	9	9.38
KANK1	0	genome.wustl.edu	37	9	732475	732477	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	732475	732477	GAG	-	DEL	KANK1	ENST00000382297	human	ensembl	74_37	+1	known	in_frame_del	c.3103_3105	p.E1038in_frame_del	1.000:1.000:1.000	NULL	pfam_Ankyrin_rpt,pfam_KN_motif,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	KANK1	HGNC	ENSG00000107104	tier1			65	0	0.00	35	5	12.50
KANK1	0	genome.wustl.edu	37	9	732475	732477	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	732475	732477	GAG	-	DEL	KANK1	ENST00000382297	human	ensembl	74_37	+1	known	in_frame_del	c.3103_3105	p.E1038in_frame_del	1.000:1.000:1.000	NULL	pfam_Ankyrin_rpt,pfam_KN_motif,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	KANK1	HGNC	ENSG00000107104	tier1			73	0	0.00	35	5	12.50
KATNAL2	0	genome.wustl.edu	37	18	44585961	44585961	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	18	44585961	44585961	A	C	SNP	KATNAL2	ENST00000245121	human	ensembl	74_37	+1	known	missense	c.269	p.N90T	0.987	NULL	pfam_ATPase_AAA_core,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	KATNAL2	HGNC	ENSG00000167216	tier1	-	-	100	0	0.00	42	4	8.70
KATNAL2	0	genome.wustl.edu	37	18	44585961	44585961	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	18	44585961	44585961	A	C	SNP	KATNAL2	ENST00000245121	human	ensembl	74_37	+1	known	missense	c.269	p.N90T	0.987	NULL	pfam_ATPase_AAA_core,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	KATNAL2	HGNC	ENSG00000167216	tier1	-	-	78	0	0.00	42	4	8.70
KCNH7	0	genome.wustl.edu	37	2	163374290	163374290	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	163374290	163374290	C	A	SNP	KCNH7	ENST00000332142	human	ensembl	74_37	-1	known	missense	c.842	p.G281V	1.000	NULL	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,pfam_2pore_dom_K_chnl_dom,pfam_PAS_fold_3,superfamily_cNMP-bd-like,superfamily_PAS,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,tigrfam_PAS	-	no_errors	KCNH7	HGNC	ENSG00000184611				36	0	0.00	31	4	11.43
KCNQ3	0	genome.wustl.edu	37	8	133192504	133192504	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	133192504	133192504	A	G	SNP	KCNQ3	ENST00000388996	human	ensembl	74_37	-1	known	missense	c.677	p.L226P	1.000	pfam_Ion_trans_dom	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ankyrin-G_BS,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_volt-dep_KCNQ3,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ3	HGNC	ENSG00000184156				30	0	0.00	32	4	11.11
KCNRG	0	genome.wustl.edu	37	13	50589912	50589912	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	13	50589912	50589912	G	T	SNP	KCNRG	ENST00000312942	human	ensembl	74_37	+1	known	missense	c.283	p.V95F	1.000	superfamily_BTB/POZ_fold,smart_BTB/POZ-like	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	-	no_errors	KCNRG	HGNC	ENSG00000198553				41	0	0.00	53	5	8.62
KCNS3	0	genome.wustl.edu	37	2	18112861	18112861	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	18112861	18112861	C	A	SNP	KCNS3	ENST00000304101	human	ensembl	74_37	+1	known	missense	c.586	p.L196M	1.000	prints_K_chnl,prints_K_chnl_volt-dep_Kv9	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv2	-	no_errors	KCNS3	HGNC	ENSG00000170745	tier1	-	-	42	0	0.00	26	6	18.75
KCNS3	0	genome.wustl.edu	37	2	18112861	18112861	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	18112861	18112861	C	A	SNP	KCNS3	ENST00000304101	human	ensembl	74_37	+1	known	missense	c.586	p.L196M	1.000	prints_K_chnl,prints_K_chnl_volt-dep_Kv9	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv2	-	no_errors	KCNS3	HGNC	ENSG00000170745	tier1	-	-	74	0	0.00	26	6	18.75
KCNT2	0	genome.wustl.edu	37	1	196300370	196300370	+	Silent	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	196300370	196300370	A	C	SNP	KCNT2	ENST00000294725	human	ensembl	74_37	-1	known	silent	c.2019	p.P673	0.634	NULL	pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom	-	no_errors	KCNT2	HGNC	ENSG00000162687				88	0	0.00	70	4	5.41
KDM3B	0	genome.wustl.edu	37	5	137727387	137727387	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	137727387	137727387	A	C	SNP	KDM3B	ENST00000314358	human	ensembl	74_37	+1	known	missense	c.2066	p.K689T	1.000	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	KDM3B	HGNC	ENSG00000120733	tier1	-	-	35	0	0.00	21	8	27.59
KDM3B	0	genome.wustl.edu	37	5	137727387	137727387	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	137727387	137727387	A	C	SNP	KDM3B	ENST00000314358	human	ensembl	74_37	+1	known	missense	c.2066	p.K689T	1.000	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	KDM3B	HGNC	ENSG00000120733	tier1	-	-	37	0	0.00	21	8	27.59
KIAA0895	0	genome.wustl.edu	37	7	36373542	36373542	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	36373542	36373542	C	A	SNP	KIAA0895	ENST00000297063	human	ensembl	74_37	-1	known	missense	c.1229	p.R410M	0.975	pfam_DUF1704	pfam_DUF1704	-	no_errors	KIAA0895	HGNC	ENSG00000164542	tier1	-	-	126	0	0.00	129	16	11.03
KIAA0895	0	genome.wustl.edu	37	7	36373542	36373542	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	36373542	36373542	C	A	SNP	KIAA0895	ENST00000297063	human	ensembl	74_37	-1	known	missense	c.1229	p.R410M	0.975	pfam_DUF1704	pfam_DUF1704	-	no_errors	KIAA0895	HGNC	ENSG00000164542	tier1	-	-	133	0	0.00	129	16	11.03
KIAA0947	0	genome.wustl.edu	37	5	5464788	5464788	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	5464788	5464788	G	A	SNP	KIAA0947	ENST00000296564	human	ensembl	74_37	+1	known	missense	c.5341	p.A1781T	0.015	NULL	superfamily_Vitellinogen_superhlx	-	no_errors	KIAA0947	HGNC	ENSG00000164151	tier1	-	-	81	0	0.00	43	4	8.51
KIAA0947	0	genome.wustl.edu	37	5	5464788	5464788	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	5464788	5464788	G	A	SNP	KIAA0947	ENST00000296564	human	ensembl	74_37	+1	known	missense	c.5341	p.A1781T	0.015	NULL	superfamily_Vitellinogen_superhlx	-	no_errors	KIAA0947	HGNC	ENSG00000164151	tier1	-	-	85	0	0.00	43	4	8.51
KIAA1107	0	genome.wustl.edu	37	1	92642532	92642532	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	92642532	92642532	T	C	SNP	KIAA1107	ENST00000409154	human	ensembl	74_37	+1	known	silent	c.633	p.N211	0.560	NULL	NULL	-	no_errors	KIAA1107	HGNC	ENSG00000069712	tier1	-	-	106	0	0.00	65	4	5.80
KIAA1107	0	genome.wustl.edu	37	1	92642532	92642532	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	92642532	92642532	T	C	SNP	KIAA1107	ENST00000409154	human	ensembl	74_37	+1	known	silent	c.633	p.N211	0.560	NULL	NULL	-	no_errors	KIAA1107	HGNC	ENSG00000069712	tier1	-	-	60	0	0.00	65	4	5.80
KIAA1109	0	genome.wustl.edu	37	4	123188104	123188104	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	123188104	123188104	G	A	SNP	KIAA1109	ENST00000264501	human	ensembl	74_37	+1	known	missense	c.7484	p.R2495K	1.000	NULL	pfam_Fragile_site-assoc_C	-	no_errors	KIAA1109	HGNC	ENSG00000138688	tier1	-	-	39	0	0.00	42	17	28.81
KIAA1109	0	genome.wustl.edu	37	4	123188104	123188104	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	123188104	123188104	G	A	SNP	KIAA1109	ENST00000264501	human	ensembl	74_37	+1	known	missense	c.7484	p.R2495K	1.000	NULL	pfam_Fragile_site-assoc_C	-	no_errors	KIAA1109	HGNC	ENSG00000138688	tier1	-	-	50	0	0.00	42	17	28.81
KIAA1755	0	genome.wustl.edu	37	20	36869850	36869850	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	20	36869850	36869850	A	T	SNP	KIAA1755	ENST00000279024	human	ensembl	74_37	-1	known	missense	c.683	p.L228H	0.051	NULL	superfamily_CRAL-TRIO_dom	-	no_errors	KIAA1755	HGNC	ENSG00000149633	tier1	-	-	62	0	0.00	59	51	45.95
KIAA1755	0	genome.wustl.edu	37	20	36869850	36869850	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	20	36869850	36869850	A	T	SNP	KIAA1755	ENST00000279024	human	ensembl	74_37	-1	known	missense	c.683	p.L228H	0.051	NULL	superfamily_CRAL-TRIO_dom	-	no_errors	KIAA1755	HGNC	ENSG00000149633	tier1	-	-	71	0	0.00	59	51	45.95
KIF24	0	genome.wustl.edu	37	9	34311339	34311339	+	Silent	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	34311339	34311339	T	A	SNP	KIF24	ENST00000379166	human	ensembl	74_37	-1	known	silent	c.6	p.A2	0.998	superfamily_SAM/pointed,pfscan_SAM	pfam_Kinesin_motor_dom,pfam_SAM_type1,superfamily_P-loop_NTPase,superfamily_SAM/pointed,smart_Kinesin_motor_dom,pfscan_SAM,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF24	HGNC	ENSG00000186638	tier1	-	-	82	0	0.00	48	4	7.69
KIF9	0	genome.wustl.edu	37	3	47287002	47287002	+	Splice_Site	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	47287002	47287002	C	T	SNP	KIF9	ENST00000265529	human	ensembl	74_37	-1	known	splice_site	c.1290-1	e13-1	1.000	-	-	-	no_errors	KIF9	HGNC	ENSG00000088727	tier1	-	-	76	0	0.00	42	5	10.42
KIF9	0	genome.wustl.edu	37	3	47287002	47287002	+	Splice_Site	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	47287002	47287002	C	T	SNP	KIF9	ENST00000265529	human	ensembl	74_37	-1	known	splice_site	c.1290-1	e13-1	1.000	-	-	-	no_errors	KIF9	HGNC	ENSG00000088727	tier1	-	-	77	0	0.00	42	5	10.42
KLK3	0	genome.wustl.edu	37	19	51362846	51362846	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	51362846	51362846	C	A	SNP	KLK3	ENST00000360617	human	ensembl	74_37	+1	known	missense	c.691	p.L231I	0.190	NULL	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	KLK3	HGNC	ENSG00000142515	tier1	-	-	60	0	0.00	34	4	10.53
KLK3	0	genome.wustl.edu	37	19	51362846	51362846	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	51362846	51362846	C	A	SNP	KLK3	ENST00000360617	human	ensembl	74_37	+1	known	missense	c.691	p.L231I	0.190	NULL	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	KLK3	HGNC	ENSG00000142515	tier1	-	-	74	0	0.00	34	4	10.53
KNG1	0	genome.wustl.edu	37	3	186440291	186440291	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	186440291	186440291	G	T	SNP	KNG1	ENST00000265023	human	ensembl	74_37	+1	known	missense	c.372	p.Q124H	1.000	smart_Prot_inh_cystat	pfam_Prot_inh_cystat,smart_Prot_inh_cystat,prints_Kininogen	-	no_errors	KNG1	HGNC	ENSG00000113889	tier1	-	-	102	0	0.00	77	5	6.02
KNG1	0	genome.wustl.edu	37	3	186440291	186440291	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	186440291	186440291	G	T	SNP	KNG1	ENST00000265023	human	ensembl	74_37	+1	known	missense	c.372	p.Q124H	1.000	smart_Prot_inh_cystat	pfam_Prot_inh_cystat,smart_Prot_inh_cystat,prints_Kininogen	-	no_errors	KNG1	HGNC	ENSG00000113889	tier1	-	-	119	0	0.00	77	5	6.02
KRAS	0	genome.wustl.edu	37	12	25380275	25380275	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	25380275	25380275	T	G	SNP	KRAS	ENST00000256078	human	ensembl	74_37	-1	known	missense	c.183	p.Q61H	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	KRAS	HGNC	ENSG00000133703	tier1	rs17851045	-	64	0	0.00	46	4	7.84
KRAS	0	genome.wustl.edu	37	12	25380275	25380275	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	25380275	25380275	T	G	SNP	KRAS	ENST00000256078	human	ensembl	74_37	-1	known	missense	c.183	p.Q61H	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	KRAS	HGNC	ENSG00000133703	tier1	rs17851045	-	74	0	0.00	46	4	7.84
KREMEN1	0	genome.wustl.edu	37	22	29533335	29533335	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	22	29533335	29533335	G	T	SNP	KREMEN1	ENST00000327813	human	ensembl	74_37	+1	known	missense	c.637	p.V213L	0.211	pirsf_Kremen	pirsf_Kremen,pfam_Kringle,pfam_WSC_carb-bd,pfam_CUB_dom,superfamily_Kringle-like,superfamily_CUB_dom,superfamily_Scorpion_toxin-like,smart_Kringle,smart_WSC_carb-bd_subgr,smart_CUB_dom,pfscan_CUB_dom,pfscan_Kringle,pfscan_WSC_carb-bd	-	no_errors	KREMEN1	HGNC	ENSG00000183762	tier1	-	-	54	0	0.00	21	3	12.50
KRIT1	0	genome.wustl.edu	37	7	91842564	91842564	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	91842564	91842564	G	A	SNP	KRIT1	ENST00000340022	human	ensembl	74_37	-1	known	missense	c.1970	p.P657L	1.000	pfscan_FERM_domain	pfam_FERM_central,superfamily_Ankyrin_rpt-contain_dom,superfamily_FERM_central,smart_Ankyrin_rpt,smart_Band_41_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_FERM_domain	-	no_errors	KRIT1	HGNC	ENSG00000001631	tier1	-	-	32	0	0.00	392	22	5.29
KRIT1	0	genome.wustl.edu	37	7	91842564	91842564	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	91842564	91842564	G	A	SNP	KRIT1	ENST00000340022	human	ensembl	74_37	-1	known	missense	c.1970	p.P657L	1.000	pfscan_FERM_domain	pfam_FERM_central,superfamily_Ankyrin_rpt-contain_dom,superfamily_FERM_central,smart_Ankyrin_rpt,smart_Band_41_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_FERM_domain	-	no_errors	KRIT1	HGNC	ENSG00000001631	tier1	-	-	72	0	0.00	392	22	5.29
KRT24	0	genome.wustl.edu	37	17	38859476	38859476	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	38859476	38859476	T	G	SNP	KRT24	ENST00000264651	human	ensembl	74_37	-1	known	missense	c.470	p.K157T	1.000	pfam_IF	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT24	HGNC	ENSG00000167916	tier1	-	-	60	0	0.00	118	11	8.53
KRT26	0	genome.wustl.edu	37	17	38928284	38928284	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	38928284	38928284	A	C	SNP	KRT26	ENST00000335552	human	ensembl	74_37	-1	known	missense	c.82	p.F28V	0.277	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT26	HGNC	ENSG00000186393	tier1	-	-	102	0	0.00	98	11	10.00
KRT26	0	genome.wustl.edu	37	17	38928284	38928284	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	38928284	38928284	A	C	SNP	KRT26	ENST00000335552	human	ensembl	74_37	-1	known	missense	c.82	p.F28V	0.277	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT26	HGNC	ENSG00000186393	tier1	-	-	70	0	0.00	98	11	10.00
KRT27	0	genome.wustl.edu	37	17	38938665	38938665	+	Silent	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	38938665	38938665	T	G	SNP	KRT27	ENST00000301656	human	ensembl	74_37	-1	known	silent	c.81	p.G27	0.009	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT27	HGNC	ENSG00000171446	tier1	-	-	55	0	0.00	81	6	6.82
KRT27	0	genome.wustl.edu	37	17	38938665	38938665	+	Silent	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	38938665	38938665	T	G	SNP	KRT27	ENST00000301656	human	ensembl	74_37	-1	known	silent	c.81	p.G27	0.009	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT27	HGNC	ENSG00000171446	tier1	-	-	69	0	0.00	81	6	6.82
KRT4	0	genome.wustl.edu	37	12	53202111	53202111	+	Silent	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	53202111	53202111	C	T	SNP	KRT4	ENST00000293774	human	ensembl	74_37	-1	known	silent	c.1314	p.R438	0.998	pfam_IF,superfamily_Prefoldin	pfam_IF,superfamily_Prefoldin,prints_Keratin_II,prints_Keratin_I	-	no_errors	KRT4	HGNC	ENSG00000170477	tier1	-	-	30	0	0.00	43	6	12.24
KRT4	0	genome.wustl.edu	37	12	53202111	53202111	+	Silent	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	53202111	53202111	C	T	SNP	KRT4	ENST00000293774	human	ensembl	74_37	-1	known	silent	c.1314	p.R438	0.998	pfam_IF,superfamily_Prefoldin	pfam_IF,superfamily_Prefoldin,prints_Keratin_II,prints_Keratin_I	-	no_errors	KRT4	HGNC	ENSG00000170477	tier1	-	-	41	0	0.00	43	6	12.24
KRT76	0	genome.wustl.edu	37	12	53162830	53162830	+	Silent	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	53162830	53162830	C	A	SNP	KRT76	ENST00000332411	human	ensembl	74_37	-1	known	silent	c.1584	p.G528	0.140	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_II,prints_Keratin_I	-	no_errors	KRT76	HGNC	ENSG00000185069	tier1	-	-	64	0	0.00	42	5	10.64
KRT76	0	genome.wustl.edu	37	12	53162830	53162830	+	Silent	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	53162830	53162830	C	A	SNP	KRT76	ENST00000332411	human	ensembl	74_37	-1	known	silent	c.1584	p.G528	0.140	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_II,prints_Keratin_I	-	no_errors	KRT76	HGNC	ENSG00000185069	tier1	-	-	75	0	0.00	42	5	10.64
KRT84	0	genome.wustl.edu	37	12	52777380	52777380	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	52777380	52777380	T	A	SNP	KRT84	ENST00000257951	human	ensembl	74_37	-1	known	missense	c.749	p.K250M	1.000	pfam_IF,prints_Keratin_II,prints_Keratin_I	pfam_IF,superfamily_Prefoldin,prints_Keratin_II,prints_Keratin_I	-	no_errors	KRT84	HGNC	ENSG00000161849	tier1	-	-	48	0	0.00	25	4	13.79
KRT84	0	genome.wustl.edu	37	12	52777380	52777380	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	52777380	52777380	T	A	SNP	KRT84	ENST00000257951	human	ensembl	74_37	-1	known	missense	c.749	p.K250M	1.000	pfam_IF,prints_Keratin_II,prints_Keratin_I	pfam_IF,superfamily_Prefoldin,prints_Keratin_II,prints_Keratin_I	-	no_errors	KRT84	HGNC	ENSG00000161849	tier1	-	-	51	0	0.00	25	4	13.79
KRT85	0	genome.wustl.edu	37	12	52756165	52756165	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	52756165	52756165	C	A	SNP	KRT85	ENST00000257901	human	ensembl	74_37	-1	known	missense	c.1168	p.G390C	0.999	pfam_IF,superfamily_Prefoldin	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT85	HGNC	ENSG00000135443	tier1	-	-	52	0	0.00	31	4	11.43
KRT85	0	genome.wustl.edu	37	12	52756165	52756165	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	52756165	52756165	C	A	SNP	KRT85	ENST00000257901	human	ensembl	74_37	-1	known	missense	c.1168	p.G390C	0.999	pfam_IF,superfamily_Prefoldin	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT85	HGNC	ENSG00000135443	tier1	-	-	56	0	0.00	31	4	11.43
KTN1	0	genome.wustl.edu	37	14	56113725	56113725	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	56113725	56113725	G	T	SNP	KTN1	ENST00000395309	human	ensembl	74_37	+1	known	missense	c.2207	p.C736F	1.000	NULL	NULL	-	no_errors	KTN1	HGNC	ENSG00000126777				79	0	0.00	54	4	6.90
L3MBTL4	0	genome.wustl.edu	37	18	6171845	6171845	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	18	6171845	6171845	G	A	SNP	L3MBTL4	ENST00000284898	human	ensembl	74_37	-1	known	missense	c.1078	p.P360S	1.000	pfam_Mbt,smart_Mbt,pfscan_Mbt	pfam_Mbt,pfam_SAM_type1,pfam_Znf_C2HC,pfam_SAM_2,superfamily_SAM/pointed,smart_Mbt,smart_SAM,pfscan_Mbt,pfscan_SAM	-	no_errors	L3MBTL4	HGNC	ENSG00000154655	tier1	-	-	60	0	0.00	36	17	32.08
L3MBTL4	0	genome.wustl.edu	37	18	6171845	6171845	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	18	6171845	6171845	G	A	SNP	L3MBTL4	ENST00000284898	human	ensembl	74_37	-1	known	missense	c.1078	p.P360S	1.000	pfam_Mbt,smart_Mbt,pfscan_Mbt	pfam_Mbt,pfam_SAM_type1,pfam_Znf_C2HC,pfam_SAM_2,superfamily_SAM/pointed,smart_Mbt,smart_SAM,pfscan_Mbt,pfscan_SAM	-	no_errors	L3MBTL4	HGNC	ENSG00000154655	tier1	-	-	81	0	0.00	36	17	32.08
LAMA1	0	genome.wustl.edu	37	18	6985297	6985297	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	18	6985297	6985297	G	C	SNP	LAMA1	ENST00000389658	human	ensembl	74_37	-1	known	missense	c.5599	p.L1867V	0.906	NULL	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_B_type_IV,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA1	HGNC	ENSG00000101680	tier1	-	-	51	0	0.00	32	4	11.11
LAMA1	0	genome.wustl.edu	37	18	6985297	6985297	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	18	6985297	6985297	G	C	SNP	LAMA1	ENST00000389658	human	ensembl	74_37	-1	known	missense	c.5599	p.L1867V	0.906	NULL	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_B_type_IV,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA1	HGNC	ENSG00000101680	tier1	-	-	67	0	0.00	32	4	11.11
LAMA1	0	genome.wustl.edu	37	18	7037696	7037696	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	18	7037696	7037696	G	T	SNP	LAMA1	ENST00000389658	human	ensembl	74_37	-1	known	missense	c.1618	p.P540T	0.029	pfscan_Laminin_B_type_IV	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_B_type_IV,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA1	HGNC	ENSG00000101680	tier1	-	-	34	0	0.00	20	4	16.67
LAMA1	0	genome.wustl.edu	37	18	7037696	7037696	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	18	7037696	7037696	G	T	SNP	LAMA1	ENST00000389658	human	ensembl	74_37	-1	known	missense	c.1618	p.P540T	0.029	pfscan_Laminin_B_type_IV	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_B_type_IV,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA1	HGNC	ENSG00000101680	tier1	-	-	59	0	0.00	20	4	16.67
LAMA2	0	genome.wustl.edu	37	6	129475657	129475657	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	129475657	129475657	T	G	SNP	LAMA2	ENST00000421865	human	ensembl	74_37	+1	known	missense	c.1035	p.N345K	1.000	pfam_EGF_laminin,smart_EGF_laminin	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_B_type_IV,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,superfamily_t-SNARE,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA2	HGNC	ENSG00000196569	tier1	-	-	56	0	0.00	57	6	9.52
LAMA2	0	genome.wustl.edu	37	6	129475657	129475657	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	129475657	129475657	T	G	SNP	LAMA2	ENST00000421865	human	ensembl	74_37	+1	known	missense	c.1035	p.N345K	1.000	pfam_EGF_laminin,smart_EGF_laminin	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_B_type_IV,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,superfamily_t-SNARE,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA2	HGNC	ENSG00000196569	tier1	-	-	81	0	0.00	57	6	9.52
LAMB4	0	genome.wustl.edu	37	7	107696117	107696117	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	107696117	107696117	C	G	SNP	LAMB4	ENST00000205386	human	ensembl	74_37	-1	known	missense	c.3715	p.G1239R	0.970	NULL	pfam_EGF_laminin,pfam_Laminin_N,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,pfscan_Laminin_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB4	HGNC	ENSG00000091128	tier1	-	-	108	0	0.00	60	18	23.08
LAMB4	0	genome.wustl.edu	37	7	107696117	107696117	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	107696117	107696117	C	G	SNP	LAMB4	ENST00000205386	human	ensembl	74_37	-1	known	missense	c.3715	p.G1239R	0.970	NULL	pfam_EGF_laminin,pfam_Laminin_N,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,pfscan_Laminin_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB4	HGNC	ENSG00000091128	tier1	-	-	92	0	0.00	60	18	23.08
LCE1E	0	genome.wustl.edu	37	1	152760062	152760062	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	152760062	152760062	G	T	SNP	LCE1E	ENST00000368770	human	ensembl	74_37	+1	known	missense	c.287	p.C96F	0.997	NULL	NULL	-	no_errors	LCE1E	HGNC	ENSG00000186226	tier1	-	-	75	0	0.00	49	5	9.26
LCE1E	0	genome.wustl.edu	37	1	152760062	152760062	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	152760062	152760062	G	T	SNP	LCE1E	ENST00000368770	human	ensembl	74_37	+1	known	missense	c.287	p.C96F	0.997	NULL	NULL	-	no_errors	LCE1E	HGNC	ENSG00000186226	tier1	-	-	76	0	0.00	49	5	9.26
LCT	0	genome.wustl.edu	37	2	136581559	136581559	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	136581559	136581559	T	G	SNP	LCT	ENST00000264162	human	ensembl	74_37	-1	known	missense	c.819	p.K273N	1.000	NULL	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_1	-	no_errors	LCT	HGNC	ENSG00000115850	tier1	-	-	46	0	0.00	51	4	7.27
LCT	0	genome.wustl.edu	37	2	136581559	136581559	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	136581559	136581559	T	G	SNP	LCT	ENST00000264162	human	ensembl	74_37	-1	known	missense	c.819	p.K273N	1.000	NULL	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_1	-	no_errors	LCT	HGNC	ENSG00000115850	tier1	-	-	73	0	0.00	51	4	7.27
LEF1	0	genome.wustl.edu	37	4	109004508	109004508	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	109004508	109004508	T	C	SNP	LEF1	ENST00000512172	human	ensembl	74_37	-1	putative	silent	c.438	p.*146	1.000	NULL	pfam_CTNNB1-bd_N	-	no_errors	LEF1	HGNC	ENSG00000138795	tier1	-	-	86	0	0.00	63	21	25.00
LEF1	0	genome.wustl.edu	37	4	109004508	109004508	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	109004508	109004508	T	C	SNP	LEF1	ENST00000512172	human	ensembl	74_37	-1	putative	silent	c.438	p.*146	1.000	NULL	pfam_CTNNB1-bd_N	-	no_errors	LEF1	HGNC	ENSG00000138795	tier1	-	-	92	0	0.00	63	21	25.00
LIFR	0	genome.wustl.edu	37	5	38510727	38510727	+	Frame_Shift_Del	DEL	A	A	-			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	38510727	38510727	A	-	DEL	LIFR	ENST00000263409	human	ensembl	74_37	-1	known	frame_shift_del	c.830	p.V277fs	0.351	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	LIFR	HGNC	ENSG00000113594	tier1			128	0	0.00	64	7	9.86
LIFR	0	genome.wustl.edu	37	5	38510727	38510727	+	Frame_Shift_Del	DEL	A	A	-			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	38510727	38510727	A	-	DEL	LIFR	ENST00000263409	human	ensembl	74_37	-1	known	frame_shift_del	c.830	p.V277fs	0.351	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	LIFR	HGNC	ENSG00000113594	tier1			73	0	0.00	64	7	9.86
LIFR	0	genome.wustl.edu	37	5	38510729	38510729	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	38510729	38510729	T	C	SNP	LIFR	ENST00000263409	human	ensembl	74_37	-1	known	silent	c.828	p.K276	0.108	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	LIFR	HGNC	ENSG00000113594	tier1	-	-	122	0	0.00	65	7	9.72
LIFR	0	genome.wustl.edu	37	5	38510729	38510729	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	38510729	38510729	T	C	SNP	LIFR	ENST00000263409	human	ensembl	74_37	-1	known	silent	c.828	p.K276	0.108	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	LIFR	HGNC	ENSG00000113594	tier1	-	-	72	0	0.00	65	7	9.72
LIFR	0	genome.wustl.edu	37	5	38510735	38510735	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	38510735	38510735	T	C	SNP	LIFR	ENST00000263409	human	ensembl	74_37	-1	known	silent	c.822	p.Q274	0.255	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	LIFR	HGNC	ENSG00000113594	tier1	-	-	126	0	0.00	59	7	10.61
LIFR	0	genome.wustl.edu	37	5	38510735	38510735	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	38510735	38510735	T	C	SNP	LIFR	ENST00000263409	human	ensembl	74_37	-1	known	silent	c.822	p.Q274	0.255	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	LIFR	HGNC	ENSG00000113594	tier1	-	-	71	0	0.00	59	7	10.61
LIMCH1	0	genome.wustl.edu	37	4	41652620	41652620	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	41652620	41652620	C	T	SNP	LIMCH1	ENST00000503057	human	ensembl	74_37	+1	known	missense	c.3031	p.L1011F	0.002	NULL	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	LIMCH1	HGNC	ENSG00000064042	tier1	-	-	41	0	0.00	15	7	31.82
LIMCH1	0	genome.wustl.edu	37	4	41652620	41652620	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	41652620	41652620	C	T	SNP	LIMCH1	ENST00000503057	human	ensembl	74_37	+1	known	missense	c.3031	p.L1011F	0.002	NULL	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	LIMCH1	HGNC	ENSG00000064042	tier1	-	-	47	0	0.00	15	7	31.82
LINC00200	0	genome.wustl.edu	37	10	1208488	1208488	+	RNA	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	1208488	1208488	G	T	SNP	LINC00200	ENST00000425630	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LINC00200	HGNC	ENSG00000229205	tier1	-	-	41	0	0.00	34	4	10.53
LINC00200	0	genome.wustl.edu	37	10	1208488	1208488	+	RNA	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	1208488	1208488	G	T	SNP	LINC00200	ENST00000425630	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LINC00200	HGNC	ENSG00000229205	tier1	-	-	58	0	0.00	34	4	10.53
LINC00301	0	genome.wustl.edu	37	11	60388573	60388573	+	RNA	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	60388573	60388573	A	C	SNP	LINC00301	ENST00000320202	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.035	-	-	-	no_errors	LINC00301	HGNC	ENSG00000181995	tier1	-	-	106	0	0.00	61	5	7.46
LINC00301	0	genome.wustl.edu	37	11	60388573	60388573	+	RNA	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	60388573	60388573	A	C	SNP	LINC00301	ENST00000320202	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.035	-	-	-	no_errors	LINC00301	HGNC	ENSG00000181995	tier1	-	-	60	0	0.00	61	5	7.46
LINC00599	0	genome.wustl.edu	37	8	9760910	9760910	+	RNA	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	9760910	9760910	T	G	SNP	LINC00599	ENST00000385275	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	LINC00599	HGNC	ENSG00000253230	tier1	-	-	102	0	0.00	51	12	19.05
LINC00599	0	genome.wustl.edu	37	8	9760910	9760910	+	RNA	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	9760910	9760910	T	G	SNP	LINC00599	ENST00000385275	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	LINC00599	HGNC	ENSG00000253230	tier1	-	-	96	0	0.00	51	12	19.05
LIPI	0	genome.wustl.edu	37	21	15517060	15517060	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	21	15517060	15517060	G	C	SNP	LIPI	ENST00000344577	human	ensembl	74_37	-1	known	missense	c.1242	p.D414E	0.178	pirsf_Lipoprotein_lipase_LIPH	pfam_Lipase_N,pirsf_Lipoprotein_lipase_LIPH,prints_Lipase	-	no_errors	LIPI	HGNC	ENSG00000188992	tier1	-	-	100	0	0.00	75	4	5.06
LIPI	0	genome.wustl.edu	37	21	15517060	15517060	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	21	15517060	15517060	G	C	SNP	LIPI	ENST00000344577	human	ensembl	74_37	-1	known	missense	c.1242	p.D414E	0.178	pirsf_Lipoprotein_lipase_LIPH	pfam_Lipase_N,pirsf_Lipoprotein_lipase_LIPH,prints_Lipase	-	no_errors	LIPI	HGNC	ENSG00000188992	tier1	-	-	73	0	0.00	75	4	5.06
LIX1	0	genome.wustl.edu	37	5	96430719	96430719	+	Silent	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	96430719	96430719	A	G	SNP	LIX1	ENST00000274382	human	ensembl	74_37	-1	known	silent	c.582	p.S194	1.000	NULL	NULL	-	no_errors	LIX1	HGNC	ENSG00000145721	tier1	-	-	43	0	0.00	23	5	17.86
LMOD1	0	genome.wustl.edu	37	1	201869082	201869082	+	Silent	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	201869082	201869082	C	T	SNP	LMOD1	ENST00000367288	human	ensembl	74_37	-1	known	silent	c.1059	p.E353	1.000	NULL	pfam_Tropomodulin,pfam_WH2_dom,smart_WH2_dom,pfscan_WH2_dom	-	no_errors	LMOD1	HGNC	ENSG00000163431	tier1	-	-	40	0	0.00	26	20	43.48
LMOD1	0	genome.wustl.edu	37	1	201869082	201869082	+	Silent	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	201869082	201869082	C	T	SNP	LMOD1	ENST00000367288	human	ensembl	74_37	-1	known	silent	c.1059	p.E353	1.000	NULL	pfam_Tropomodulin,pfam_WH2_dom,smart_WH2_dom,pfscan_WH2_dom	-	no_errors	LMOD1	HGNC	ENSG00000163431	tier1	-	-	51	0	0.00	26	20	43.48
LOC100128317	0	genome.wustl.edu	37	7	81207855	81207855	+	RNA	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	81207855	81207855	T	C	SNP	LOC100128317	ENST00000413944	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC010091.1	Clone_based_vega_gene	ENSG00000233491	tier1	-	-	58	0	0.00	57	27	32.14
LOC100128317	0	genome.wustl.edu	37	7	81207855	81207855	+	RNA	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	81207855	81207855	T	C	SNP	LOC100128317	ENST00000413944	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC010091.1	Clone_based_vega_gene	ENSG00000233491	tier1	-	-	71	0	0.00	57	27	32.14
LOC100631378	0	genome.wustl.edu	37	19	38315139	38315139	+	RNA	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	38315139	38315139	A	G	SNP	LOC100631378	ENST00000592640	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC016582.2	Clone_based_vega_gene	ENSG00000225868	tier1	-	-	71	0	0.00	74	4	5.13
LOC101927091	0	genome.wustl.edu	37	15	94304129	94304129	+	RNA	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	94304129	94304129	A	C	SNP	LOC101927091	ENST00000557481	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.013	-	-	-	no_errors	CTD-3049M7.1	Clone_based_vega_gene	ENSG00000258754	tier1	-	-	45	0	0.00	28	5	15.15
LOC101927648	0	genome.wustl.edu	37	1	143400965	143400965	+	RNA	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	143400965	143400965	G	T	SNP	LOC101927648	ENST00000443766	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.023	-	-	-	no_errors	RP11-435B5.4	Clone_based_vega_gene	ENSG00000185044	tier1	-	-	346	0	0.00	231	15	6.10
LOC101927648	0	genome.wustl.edu	37	1	143400966	143400966	+	RNA	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	143400966	143400966	G	T	SNP	LOC101927648	ENST00000443766	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.026	-	-	-	no_errors	RP11-435B5.4	Clone_based_vega_gene	ENSG00000185044	tier1	-	-	346	0	0.00	232	15	6.07
LOC101927648	0	genome.wustl.edu	37	1	143400966	143400966	+	RNA	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	143400966	143400966	G	T	SNP	LOC101927648	ENST00000443766	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.026	-	-	-	no_errors	RP11-435B5.4	Clone_based_vega_gene	ENSG00000185044	tier1	-	-	365	0	0.00	232	15	6.07
LOC149134	0	genome.wustl.edu	37	1	246939869	246939869	+	RNA	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	246939869	246939869	A	G	SNP	LOC149134	ENST00000421003	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-439E19.3	Clone_based_vega_gene	ENSG00000227953	tier1	-	-	34	0	0.00	37	7	15.91
LOC149134	0	genome.wustl.edu	37	1	246939869	246939869	+	RNA	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	246939869	246939869	A	G	SNP	LOC149134	ENST00000421003	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-439E19.3	Clone_based_vega_gene	ENSG00000227953	tier1	-	-	54	0	0.00	37	7	15.91
LOC644145	0	genome.wustl.edu	37	4	56697559	56697559	+	RNA	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	56697559	56697559	G	T	SNP	LOC644145	ENST00000504250	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-345F18.1	Clone_based_vega_gene	ENSG00000250821	tier1	-	-	42	0	0.00	54	6	10.00
LOC644145	0	genome.wustl.edu	37	4	56697559	56697559	+	RNA	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	56697559	56697559	G	T	SNP	LOC644145	ENST00000504250	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-345F18.1	Clone_based_vega_gene	ENSG00000250821	tier1	-	-	58	0	0.00	54	6	10.00
LPCAT4	0	genome.wustl.edu	37	15	34651894	34651894	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	34651894	34651894	C	G	SNP	LPCAT4	ENST00000314891	human	ensembl	74_37	-1	known	missense	c.1295	p.G432A	1.000	NULL	pfam_Plipid/glycerol_acylTrfase,smart_Plipid/glycerol_acylTrfase	-	no_errors	LPCAT4	HGNC	ENSG00000176454	tier1	-	-	110	0	0.00	75	4	5.06
LPCAT4	0	genome.wustl.edu	37	15	34651894	34651894	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	34651894	34651894	C	G	SNP	LPCAT4	ENST00000314891	human	ensembl	74_37	-1	known	missense	c.1295	p.G432A	1.000	NULL	pfam_Plipid/glycerol_acylTrfase,smart_Plipid/glycerol_acylTrfase	-	no_errors	LPCAT4	HGNC	ENSG00000176454	tier1	-	-	113	0	0.00	75	4	5.06
LPPR4	0	genome.wustl.edu	37	1	99771718	99771718	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	99771718	99771718	A	G	SNP	LPPR4	ENST00000370185	human	ensembl	74_37	+1	known	missense	c.1444	p.S482G	1.000	NULL	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	LPPR4	Uniprot_gn	ENSG00000117600	tier1	-	-	36	0	0.00	20	10	33.33
LPPR4	0	genome.wustl.edu	37	1	99771718	99771718	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	99771718	99771718	A	G	SNP	LPPR4	ENST00000370185	human	ensembl	74_37	+1	known	missense	c.1444	p.S482G	1.000	NULL	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	LPPR4	Uniprot_gn	ENSG00000117600	tier1	-	-	59	0	0.00	20	10	33.33
LRIG1	0	genome.wustl.edu	37	3	66434524	66434524	+	Silent	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	66434524	66434524	G	A	SNP	LRIG1	ENST00000273261	human	ensembl	74_37	-1	known	silent	c.1962	p.D654	0.896	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Cys-rich_flank_reg_C,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRIG1	HGNC	ENSG00000144749	tier1	-	-	45	0	0.00	29	6	17.14
LRIG1	0	genome.wustl.edu	37	3	66434524	66434524	+	Silent	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	66434524	66434524	G	A	SNP	LRIG1	ENST00000273261	human	ensembl	74_37	-1	known	silent	c.1962	p.D654	0.896	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Cys-rich_flank_reg_C,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRIG1	HGNC	ENSG00000144749	tier1	-	-	56	0	0.00	29	6	17.14
LRIG2	0	genome.wustl.edu	37	1	113666539	113666539	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	113666539	113666539	G	T	SNP	LRIG2	ENST00000361127	human	ensembl	74_37	+1	known	missense	c.3014	p.G1005V	0.577	NULL	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Immunoglobulin,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRIG2	HGNC	ENSG00000198799	tier1	-	-	47	0	0.00	36	4	10.00
LRIG2	0	genome.wustl.edu	37	1	113666539	113666539	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	113666539	113666539	G	T	SNP	LRIG2	ENST00000361127	human	ensembl	74_37	+1	known	missense	c.3014	p.G1005V	0.577	NULL	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Immunoglobulin,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRIG2	HGNC	ENSG00000198799	tier1	-	-	57	0	0.00	36	4	10.00
LRP12	0	genome.wustl.edu	37	8	105502452	105502452	+	RNA	DEL	T	T	-			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	105502452	105502452	T	-	DEL	LRP12	ENST00000518375	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	LRP12	HGNC	ENSG00000147650	tier1			66	0	0.00	49	25	33.78
LRP12	0	genome.wustl.edu	37	8	105509676	105509676	+	Silent	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	105509676	105509676	A	C	SNP	LRP12	ENST00000424843	human	ensembl	74_37	-1	known	silent	c.1047	p.T349	0.998	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_LDrepeatLR_classA_rpt,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_LDrepeatLR_classA_rpt,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP12	HGNC	ENSG00000147650	tier1	-	-	54	0	0.00	14	30	68.18
LRP12	0	genome.wustl.edu	37	8	105509676	105509676	+	Silent	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	105509676	105509676	A	C	SNP	LRP12	ENST00000424843	human	ensembl	74_37	-1	known	silent	c.1047	p.T349	0.998	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_LDrepeatLR_classA_rpt,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_LDrepeatLR_classA_rpt,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP12	HGNC	ENSG00000147650	tier1	-	-	87	0	0.00	14	30	68.18
LRP1B	0	genome.wustl.edu	37	2	141986843	141986843	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	141986843	141986843	T	C	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	silent	c.759	p.R253	1.000	superfamily_Growth_fac_rcpt_N_dom,smart_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	tier1	-	-	42	0	0.00	51	24	32.00
LRP1B	0	genome.wustl.edu	37	2	141986843	141986843	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	141986843	141986843	T	C	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	silent	c.759	p.R253	1.000	superfamily_Growth_fac_rcpt_N_dom,smart_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	tier1	-	-	62	0	0.00	51	24	32.00
LRP1B	0	genome.wustl.edu	37	2	142012179	142012179	+	Silent	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	142012179	142012179	A	G	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	silent	c.375	p.C125	1.000	superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	tier1	-	-	23	0	0.00	30	7	18.92
LRP1B	0	genome.wustl.edu	37	2	142012179	142012179	+	Silent	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	142012179	142012179	A	G	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	silent	c.375	p.C125	1.000	superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	tier1	-	-	31	0	0.00	30	7	18.92
LRRC14	0	genome.wustl.edu	37	8	145746747	145746747	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	145746747	145746747	A	G	SNP	LRRC14	ENST00000292524	human	ensembl	74_37	+1	known	missense	c.1367	p.K456R	1.000	NULL	NULL	-	no_errors	LRRC14	HGNC	ENSG00000160959	tier1	-	-	36	0	0.00	32	4	11.11
LRRC14	0	genome.wustl.edu	37	8	145746747	145746747	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	145746747	145746747	A	G	SNP	LRRC14	ENST00000292524	human	ensembl	74_37	+1	known	missense	c.1367	p.K456R	1.000	NULL	NULL	-	no_errors	LRRC14	HGNC	ENSG00000160959	tier1	-	-	39	0	0.00	32	4	11.11
LRRC30	0	genome.wustl.edu	37	18	7231776	7231776	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	18	7231776	7231776	T	A	SNP	LRRC30	ENST00000383467	human	ensembl	74_37	+1	known	missense	c.640	p.F214I	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC30	HGNC	ENSG00000206422	tier1	-	-	54	0	0.00	22	12	35.29
LRRC30	0	genome.wustl.edu	37	18	7231776	7231776	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	18	7231776	7231776	T	A	SNP	LRRC30	ENST00000383467	human	ensembl	74_37	+1	known	missense	c.640	p.F214I	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC30	HGNC	ENSG00000206422	tier1	-	-	72	0	0.00	22	12	35.29
LRRC37A11P	0	genome.wustl.edu	37	17	37186234	37186234	+	RNA	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	37186234	37186234	C	T	SNP	LRRC37A11P	ENST00000425901	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.008	-	-	-	no_errors	LRRC37A11P	HGNC	ENSG00000214553	tier1	-	-	105	0	0.00	200	14	6.51
LRRC37A11P	0	genome.wustl.edu	37	17	37186234	37186234	+	RNA	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	37186234	37186234	C	T	SNP	LRRC37A11P	ENST00000425901	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.008	-	-	-	no_errors	LRRC37A11P	HGNC	ENSG00000214553	tier1	-	-	108	0	0.00	200	14	6.51
LRRC8A	0	genome.wustl.edu	37	9	131669999	131669999	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	131669999	131669999	G	T	SNP	LRRC8A	ENST00000259324	human	ensembl	74_37	+1	known	missense	c.556	p.A186S	0.906	NULL	pfam_LRR_protein-8_N,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC8A	HGNC	ENSG00000136802				37	0	0.00	23	3	11.54
LRTM1	0	genome.wustl.edu	37	3	54952519	54952519	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	54952519	54952519	T	G	SNP	LRTM1	ENST00000273286	human	ensembl	74_37	-1	known	missense	c.1005	p.E335D	0.784	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	LRTM1	HGNC	ENSG00000144771	tier1	-	-	38	0	0.00	12	4	25.00
LUM	0	genome.wustl.edu	37	12	91502123	91502123	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	91502123	91502123	A	C	SNP	LUM	ENST00000266718	human	ensembl	74_37	-1	known	missense	c.634	p.L212V	0.998	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LUM	HGNC	ENSG00000139329	tier1	-	-	32	0	0.00	40	8	16.67
LUM	0	genome.wustl.edu	37	12	91502123	91502123	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	91502123	91502123	A	C	SNP	LUM	ENST00000266718	human	ensembl	74_37	-1	known	missense	c.634	p.L212V	0.998	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LUM	HGNC	ENSG00000139329	tier1	-	-	52	0	0.00	40	8	16.67
LZTR1	0	genome.wustl.edu	37	22	21346611	21346611	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	22	21346611	21346611	G	C	SNP	LZTR1	ENST00000215739	human	ensembl	74_37	+1	known	missense	c.1102	p.D368H	1.000	NULL	pfam_Kelch_1,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_Kelch_1,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	LZTR1	HGNC	ENSG00000099949	tier1	-	-	57	0	0.00	36	4	10.00
LZTR1	0	genome.wustl.edu	37	22	21346611	21346611	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	22	21346611	21346611	G	C	SNP	LZTR1	ENST00000215739	human	ensembl	74_37	+1	known	missense	c.1102	p.D368H	1.000	NULL	pfam_Kelch_1,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_Kelch_1,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	LZTR1	HGNC	ENSG00000099949	tier1	-	-	62	0	0.00	36	4	10.00
MAGEA4	0	genome.wustl.edu	37	X	151092794	151092794	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	151092794	151092794	G	C	SNP	MAGEA4	ENST00000276344	human	ensembl	74_37	+1	known	missense	c.658	p.E220Q	0.025	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEA4	HGNC	ENSG00000147381	tier1	-	-	57	0	0.00	41	15	26.79
MAGEA4	0	genome.wustl.edu	37	X	151092794	151092794	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	151092794	151092794	G	C	SNP	MAGEA4	ENST00000276344	human	ensembl	74_37	+1	known	missense	c.658	p.E220Q	0.025	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEA4	HGNC	ENSG00000147381	tier1	-	-	61	0	0.00	41	15	26.79
MAGEA8	0	genome.wustl.edu	37	X	149013830	149013830	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	149013830	149013830	C	T	SNP	MAGEA8	ENST00000286482	human	ensembl	74_37	+1	known	missense	c.784	p.R262C	0.134	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEA8	HGNC	ENSG00000156009	tier1	-	-	84	0	0.00	40	32	43.84
MAGEA8	0	genome.wustl.edu	37	X	149013830	149013830	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	149013830	149013830	C	T	SNP	MAGEA8	ENST00000286482	human	ensembl	74_37	+1	known	missense	c.784	p.R262C	0.134	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEA8	HGNC	ENSG00000156009	tier1	-	-	86	0	0.00	40	32	43.84
MAGEL2	0	genome.wustl.edu	37	15	23889690	23889690	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	23889690	23889690	T	C	SNP	MAGEL2	ENST00000532292	human	ensembl	74_37	-1	known	missense	c.1391	p.N464S	0.003	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEL2	HGNC	ENSG00000254585	tier1	-	-	48	0	0.00	26	9	25.71
MAGEL2	0	genome.wustl.edu	37	15	23889690	23889690	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	23889690	23889690	T	C	SNP	MAGEL2	ENST00000532292	human	ensembl	74_37	-1	known	missense	c.1391	p.N464S	0.003	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEL2	HGNC	ENSG00000254585	tier1	-	-	55	0	0.00	26	9	25.71
MALAT1	0	genome.wustl.edu	37	11	65269897	65269898	+	RNA	INS	-	-	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	65269897	65269898	-	T	INS	MALAT1	ENST00000534336	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.985:0.013	-	-	-	no_errors	MALAT1	HGNC	ENSG00000251562	tier1			41	0	0.00	33	3	8.33
MALAT1	0	genome.wustl.edu	37	11	65269897	65269898	+	RNA	INS	-	-	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	65269897	65269898	-	T	INS	MALAT1	ENST00000534336	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.985:0.013	-	-	-	no_errors	MALAT1	HGNC	ENSG00000251562	tier1			59	0	0.00	33	3	8.33
MAN1A1	0	genome.wustl.edu	37	6	119522431	119522431	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	119522431	119522431	G	T	SNP	MAN1A1	ENST00000368468	human	ensembl	74_37	-1	known	missense	c.1198	p.Q400K	1.000	pfam_Glyco_hydro_47,superfamily_Glyco_hydro_47	pfam_Glyco_hydro_47,superfamily_Glyco_hydro_47,prints_Glyco_hydro_47	-	no_errors	MAN1A1	HGNC	ENSG00000111885	tier1	-	-	77	0	0.00	54	4	6.90
MAN1A1	0	genome.wustl.edu	37	6	119522431	119522431	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	119522431	119522431	G	T	SNP	MAN1A1	ENST00000368468	human	ensembl	74_37	-1	known	missense	c.1198	p.Q400K	1.000	pfam_Glyco_hydro_47,superfamily_Glyco_hydro_47	pfam_Glyco_hydro_47,superfamily_Glyco_hydro_47,prints_Glyco_hydro_47	-	no_errors	MAN1A1	HGNC	ENSG00000111885	tier1	-	-	85	0	0.00	54	4	6.90
MAP3K14	0	genome.wustl.edu	37	17	43348297	43348297	+	RNA	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	43348297	43348297	G	T	SNP	MAP3K14	ENST00000376926	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.336	-	-	-	no_errors	MAP3K14	HGNC	ENSG00000006062	tier1	-	-	21	0	0.00	7	6	46.15
MAP3K14	0	genome.wustl.edu	37	17	43348297	43348297	+	RNA	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	43348297	43348297	G	T	SNP	MAP3K14	ENST00000376926	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.336	-	-	-	no_errors	MAP3K14	HGNC	ENSG00000006062	tier1	-	-	28	0	0.00	7	6	46.15
MAP3K2	0	genome.wustl.edu	37	2	128075781	128075781	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	128075781	128075781	T	G	SNP	MAP3K2	ENST00000344908	human	ensembl	74_37	-1	known	missense	c.1158	p.Q386H	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_OPR_PB1,superfamily_Kinase-like_dom,smart_OPR_PB1,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K2	HGNC	ENSG00000169967	tier1	-	-	76	0	0.00	73	5	6.41
MAP3K2	0	genome.wustl.edu	37	2	128075781	128075781	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	128075781	128075781	T	G	SNP	MAP3K2	ENST00000344908	human	ensembl	74_37	-1	known	missense	c.1158	p.Q386H	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_OPR_PB1,superfamily_Kinase-like_dom,smart_OPR_PB1,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K2	HGNC	ENSG00000169967	tier1	-	-	96	0	0.00	73	5	6.41
MAP3K4	0	genome.wustl.edu	37	6	161470381	161470381	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	161470381	161470381	G	T	SNP	MAP3K4	ENST00000392142	human	ensembl	74_37	+1	known	missense	c.1077	p.E359D	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K4	HGNC	ENSG00000085511	tier1	-	-	46	0	0.00	47	4	7.84
MAP3K4	0	genome.wustl.edu	37	6	161470381	161470381	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	161470381	161470381	G	T	SNP	MAP3K4	ENST00000392142	human	ensembl	74_37	+1	known	missense	c.1077	p.E359D	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K4	HGNC	ENSG00000085511	tier1	-	-	91	0	0.00	47	4	7.84
MAPKAPK5	0	genome.wustl.edu	37	12	112321523	112321523	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	112321523	112321523	G	T	SNP	MAPKAPK5	ENST00000551404	human	ensembl	74_37	+1	known	nonsense	c.799	p.E267*	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAPKAPK5	HGNC	ENSG00000089022				106	0	0.00	52	3	5.45
MARC2	0	genome.wustl.edu	37	1	220953534	220953534	+	Silent	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	220953534	220953534	A	G	SNP	MARC2	ENST00000366913	human	ensembl	74_37	+1	known	silent	c.837	p.P279	0.917	pfam_MoCF_Sase_C,superfamily_Pyrv_Knase-like_insert_dom	pfam_MOSC_N,pfam_MoCF_Sase_C,superfamily_Pyrv_Knase-like_insert_dom	-	no_errors	MARC2	HGNC	ENSG00000117791				93	0	0.00	71	4	5.33
MBD6	0	genome.wustl.edu	37	12	57920760	57920760	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	57920760	57920760	T	G	SNP	MBD6	ENST00000355673	human	ensembl	74_37	+1	known	missense	c.1832	p.L611R	0.701	NULL	superfamily_DNA-bd_dom,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd	-	no_errors	MBD6	HGNC	ENSG00000166987				72	0	0.00	40	6	13.04
MCF2L2	0	genome.wustl.edu	37	3	183097179	183097179	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	183097179	183097179	C	T	SNP	MCF2L2	ENST00000328913	human	ensembl	74_37	-1	known	missense	c.181	p.A61T	0.997	superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom	pfam_DH-domain,superfamily_DH-domain,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,pfscan_CRAL-TRIO_dom,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	MCF2L2	HGNC	ENSG00000053524	tier1	-	-	89	0	0.00	53	21	27.63
MCF2L2	0	genome.wustl.edu	37	3	183097179	183097179	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	183097179	183097179	C	T	SNP	MCF2L2	ENST00000328913	human	ensembl	74_37	-1	known	missense	c.181	p.A61T	0.997	superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom	pfam_DH-domain,superfamily_DH-domain,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,pfscan_CRAL-TRIO_dom,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	MCF2L2	HGNC	ENSG00000053524	tier1	-	-	91	0	0.00	53	21	27.63
MCM4	0	genome.wustl.edu	37	8	48882478	48882478	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	48882478	48882478	T	G	SNP	MCM4	ENST00000262105	human	ensembl	74_37	+1	known	missense	c.1295	p.L432R	0.989	smart_MCM_DNA-dep_ATPase	pfam_MCM_DNA-dep_ATPase,pfam_Mg_chelatse_chII,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_NA-bd_OB-fold,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,pfscan_MCM_DNA-dep_ATPase,prints_MCM_4,prints_MCM_DNA-dep_ATPase	-	no_errors	MCM4	HGNC	ENSG00000104738	tier1	-	-	126	0	0.00	81	11	11.96
MCM4	0	genome.wustl.edu	37	8	48882478	48882478	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	48882478	48882478	T	G	SNP	MCM4	ENST00000262105	human	ensembl	74_37	+1	known	missense	c.1295	p.L432R	0.989	smart_MCM_DNA-dep_ATPase	pfam_MCM_DNA-dep_ATPase,pfam_Mg_chelatse_chII,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_NA-bd_OB-fold,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,pfscan_MCM_DNA-dep_ATPase,prints_MCM_4,prints_MCM_DNA-dep_ATPase	-	no_errors	MCM4	HGNC	ENSG00000104738	tier1	-	-	86	0	0.00	81	11	11.96
MECP2	0	genome.wustl.edu	37	X	153296571	153296571	+	Silent	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	153296571	153296571	C	A	SNP	MECP2	ENST00000303391	human	ensembl	74_37	-1	known	silent	c.708	p.G236	0.730	superfamily_Ig_E-set,pirsf_Me_CpG-bd_MeCP2	pfam_Methyl_CpG_DNA-bd,superfamily_DNA-bd_dom,superfamily_Ig_E-set,smart_Methyl_CpG_DNA-bd,pirsf_Me_CpG-bd_MeCP2,pfscan_Methyl_CpG_DNA-bd	-	no_errors	MECP2	HGNC	ENSG00000169057	tier1	-	-	68	0	0.00	63	17	21.25
MECP2	0	genome.wustl.edu	37	X	153296571	153296571	+	Silent	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	153296571	153296571	C	A	SNP	MECP2	ENST00000303391	human	ensembl	74_37	-1	known	silent	c.708	p.G236	0.730	superfamily_Ig_E-set,pirsf_Me_CpG-bd_MeCP2	pfam_Methyl_CpG_DNA-bd,superfamily_DNA-bd_dom,superfamily_Ig_E-set,smart_Methyl_CpG_DNA-bd,pirsf_Me_CpG-bd_MeCP2,pfscan_Methyl_CpG_DNA-bd	-	no_errors	MECP2	HGNC	ENSG00000169057	tier1	-	-	75	0	0.00	63	17	21.25
MED12L	0	genome.wustl.edu	37	3	151082990	151082990	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	151082990	151082990	G	A	SNP	MED12L	ENST00000474524	human	ensembl	74_37	+1	known	missense	c.3076	p.G1026S	0.996	NULL	pfam_Mediator_Med12_LCEWAV,pfam_Mediator_Med12,pfam_Mediator_Med12_catenin-bd	-	no_errors	MED12L	HGNC	ENSG00000144893				30	0	0.00	22	3	12.00
MED14	0	genome.wustl.edu	37	X	40523690	40523690	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	40523690	40523690	G	A	SNP	MED14	ENST00000324817	human	ensembl	74_37	-1	known	missense	c.3317	p.A1106V	1.000	NULL	pfam_Mediator_Med14	-	no_errors	MED14	HGNC	ENSG00000180182	tier1	-	-	36	0	0.00	26	19	42.22
MEI1	0	genome.wustl.edu	37	22	42180705	42180705	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	22	42180705	42180705	C	A	SNP	MEI1	ENST00000401548	human	ensembl	74_37	+1	known	missense	c.3263	p.A1088D	0.001	NULL	superfamily_ARM-type_fold	-	no_errors	MEI1	HGNC	ENSG00000167077	tier1	-	-	60	0	0.00	28	6	17.65
MEI1	0	genome.wustl.edu	37	22	42180705	42180705	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	22	42180705	42180705	C	A	SNP	MEI1	ENST00000401548	human	ensembl	74_37	+1	known	missense	c.3263	p.A1088D	0.001	NULL	superfamily_ARM-type_fold	-	no_errors	MEI1	HGNC	ENSG00000167077	tier1	-	-	72	0	0.00	28	6	17.65
MET	0	genome.wustl.edu	37	7	116422132	116422132	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	116422132	116422132	T	C	SNP	MET	ENST00000318493	human	ensembl	74_37	+1	known	silent	c.3667	p.L1223	1.000	pirsf_Tyr_kinase_HGF/MSP_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_HGF/MSP_rcpt,pfam_Semap_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Kinase-like_dom,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Semap_dom,pfscan_Prot_kinase_dom	-	no_errors	MET	HGNC	ENSG00000105976	tier1	-	-	29	0	0.00	47	4	7.84
MET	0	genome.wustl.edu	37	7	116422132	116422132	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	116422132	116422132	T	C	SNP	MET	ENST00000318493	human	ensembl	74_37	+1	known	silent	c.3667	p.L1223	1.000	pirsf_Tyr_kinase_HGF/MSP_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_HGF/MSP_rcpt,pfam_Semap_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Kinase-like_dom,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Semap_dom,pfscan_Prot_kinase_dom	-	no_errors	MET	HGNC	ENSG00000105976	tier1	-	-	46	0	0.00	47	4	7.84
METTL13	0	genome.wustl.edu	37	1	171763613	171763613	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	171763613	171763613	G	T	SNP	METTL13	ENST00000361735	human	ensembl	74_37	+1	known	missense	c.1771	p.A591S	1.000	pfam_Spermidine/spermine_synthase	pfam_Methyltransf_11,pfam_Spermidine/spermine_synthase	-	no_errors	METTL13	HGNC	ENSG00000010165	tier1	-	-	75	0	0.00	68	4	5.56
METTL13	0	genome.wustl.edu	37	1	171763613	171763613	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	171763613	171763613	G	T	SNP	METTL13	ENST00000361735	human	ensembl	74_37	+1	known	missense	c.1771	p.A591S	1.000	pfam_Spermidine/spermine_synthase	pfam_Methyltransf_11,pfam_Spermidine/spermine_synthase	-	no_errors	METTL13	HGNC	ENSG00000010165	tier1	-	-	80	0	0.00	68	4	5.56
MFI2	0	genome.wustl.edu	37	3	196753571	196753571	+	Silent	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	196753571	196753571	C	T	SNP	MFI2	ENST00000296350	human	ensembl	74_37	-1	known	silent	c.264	p.E88	0.012	pfam_Transferrin_fam,smart_Transferrin_fam,pirsf_Transferrin	pfam_Transferrin_fam,smart_Transferrin_fam,pirsf_Transferrin,prints_Transferrin_fam	-	no_errors	MFI2	HGNC	ENSG00000163975	tier1	-	-	44	0	0.00	22	9	29.03
MFI2	0	genome.wustl.edu	37	3	196753571	196753571	+	Silent	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	196753571	196753571	C	T	SNP	MFI2	ENST00000296350	human	ensembl	74_37	-1	known	silent	c.264	p.E88	0.012	pfam_Transferrin_fam,smart_Transferrin_fam,pirsf_Transferrin	pfam_Transferrin_fam,smart_Transferrin_fam,pirsf_Transferrin,prints_Transferrin_fam	-	no_errors	MFI2	HGNC	ENSG00000163975	tier1	-	-	62	0	0.00	22	9	29.03
MFSD8	0	genome.wustl.edu	37	4	128886250	128886250	+	Silent	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	128886250	128886250	G	C	SNP	MFSD8	ENST00000296468	human	ensembl	74_37	-1	known	silent	c.39	p.L13	0.007	NULL	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	MFSD8	HGNC	ENSG00000164073	tier1	-	-	118	0	0.00	60	5	7.69
MFSD8	0	genome.wustl.edu	37	4	128886250	128886250	+	Silent	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	128886250	128886250	G	C	SNP	MFSD8	ENST00000296468	human	ensembl	74_37	-1	known	silent	c.39	p.L13	0.007	NULL	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	MFSD8	HGNC	ENSG00000164073	tier1	-	-	127	0	0.00	60	5	7.69
MIA3	0	genome.wustl.edu	37	1	222803001	222803001	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	222803001	222803001	A	C	SNP	MIA3	ENST00000344441	human	ensembl	74_37	+1	known	missense	c.2439	p.E813D	0.000	NULL	pfam_SH3_2,superfamily_SH3_domain	-	no_errors	MIA3	HGNC	ENSG00000154305	tier1	-	-	54	0	0.00	49	5	9.26
MIA3	0	genome.wustl.edu	37	1	222803001	222803001	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	222803001	222803001	A	C	SNP	MIA3	ENST00000344441	human	ensembl	74_37	+1	known	missense	c.2439	p.E813D	0.000	NULL	pfam_SH3_2,superfamily_SH3_domain	-	no_errors	MIA3	HGNC	ENSG00000154305	tier1	-	-	62	0	0.00	49	5	9.26
MICAL2	0	genome.wustl.edu	37	11	12247834	12247834	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	12247834	12247834	C	T	SNP	MICAL2	ENST00000256194	human	ensembl	74_37	+1	known	missense	c.1805	p.A602V	0.023	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pfam_CH-domain,pfam_CAMSAP_CH,pfam_Znf_LIM,pfam_mOase_FAD-bd,pfam_FAD_bind_dom,superfamily_CH-domain,smart_CH-domain,smart_Znf_LIM,pfscan_CH-domain,pfscan_Znf_LIM,prints_Rng_hydrolase-like	-	no_errors	MICAL2	HGNC	ENSG00000133816	tier1	-	-	53	0	0.00	45	4	8.16
MICAL2	0	genome.wustl.edu	37	11	12247834	12247834	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	12247834	12247834	C	T	SNP	MICAL2	ENST00000256194	human	ensembl	74_37	+1	known	missense	c.1805	p.A602V	0.023	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pfam_CH-domain,pfam_CAMSAP_CH,pfam_Znf_LIM,pfam_mOase_FAD-bd,pfam_FAD_bind_dom,superfamily_CH-domain,smart_CH-domain,smart_Znf_LIM,pfscan_CH-domain,pfscan_Znf_LIM,prints_Rng_hydrolase-like	-	no_errors	MICAL2	HGNC	ENSG00000133816	tier1	-	-	73	0	0.00	45	4	8.16
MIER2	0	genome.wustl.edu	37	19	308609	308609	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	308609	308609	G	A	SNP	MIER2	ENST00000264819	human	ensembl	74_37	-1	known	missense	c.1166	p.P389L	0.020	NULL	pfam_ELM2_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_ELM2_dom	-	no_errors	MIER2	HGNC	ENSG00000105556	tier1	-	-	130	0	0.00	82	5	5.75
MIER2	0	genome.wustl.edu	37	19	308609	308609	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	308609	308609	G	A	SNP	MIER2	ENST00000264819	human	ensembl	74_37	-1	known	missense	c.1166	p.P389L	0.020	NULL	pfam_ELM2_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_ELM2_dom	-	no_errors	MIER2	HGNC	ENSG00000105556	tier1	-	-	141	0	0.00	82	5	5.75
MIR516A1	0	genome.wustl.edu	37	19	54259997	54259997	+	RNA	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	54259997	54259997	T	C	SNP	MIR516A1	ENST00000385033	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.149	-	-	-	no_errors	MIR516A1	HGNC	ENSG00000207767	tier1	-	-	116	0	0.00	59	30	33.71
MIR516A1	0	genome.wustl.edu	37	19	54259997	54259997	+	RNA	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	54259997	54259997	T	C	SNP	MIR516A1	ENST00000385033	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.149	-	-	-	no_errors	MIR516A1	HGNC	ENSG00000207767	tier1	-	-	150	0	0.00	59	30	33.71
MIR548X	0	genome.wustl.edu	37	21	20058469	20058469	+	RNA	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	21	20058469	20058469	T	G	SNP	MIR548X	ENST00000580069	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.014	-	-	-	no_errors	MIR548X	HGNC	ENSG00000265841	tier1	-	-	40	0	0.00	47	21	30.88
MIR548X	0	genome.wustl.edu	37	21	20058469	20058469	+	RNA	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	21	20058469	20058469	T	G	SNP	MIR548X	ENST00000580069	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.014	-	-	-	no_errors	MIR548X	HGNC	ENSG00000265841	tier1	-	-	52	0	0.00	47	21	30.88
MLF1	0	genome.wustl.edu	37	3	158288991	158288991	+	RNA	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	158288991	158288991	C	T	SNP	MLF1	ENST00000497004	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.617	-	-	-	no_errors	MLF1	HGNC	ENSG00000178053	tier1	-	-	38	0	0.00	35	5	12.20
MMRN2	0	genome.wustl.edu	37	10	88717281	88717281	+	Silent	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	88717281	88717281	C	T	SNP	MMRN2	ENST00000372027	human	ensembl	74_37	-1	known	silent	c.18	p.L6	0.532	NULL	pfam_C1q,pfam_EMI_domain,superfamily_Tumour_necrosis_fac-like_dom,superfamily_tRNA-bd_arm,smart_C1q,prints_C1q,pfscan_C1q,pfscan_EMI_domain	-	no_errors	MMRN2	HGNC	ENSG00000173269	tier1	-	-	36	0	0.00	27	7	20.59
MMRN2	0	genome.wustl.edu	37	10	88717281	88717281	+	Silent	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	88717281	88717281	C	T	SNP	MMRN2	ENST00000372027	human	ensembl	74_37	-1	known	silent	c.18	p.L6	0.532	NULL	pfam_C1q,pfam_EMI_domain,superfamily_Tumour_necrosis_fac-like_dom,superfamily_tRNA-bd_arm,smart_C1q,prints_C1q,pfscan_C1q,pfscan_EMI_domain	-	no_errors	MMRN2	HGNC	ENSG00000173269	tier1	-	-	42	0	0.00	27	7	20.59
MMS19	0	genome.wustl.edu	37	10	99225566	99225566	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	99225566	99225566	G	T	SNP	MMS19	ENST00000370782	human	ensembl	74_37	-1	known	missense	c.1752	p.N584K	1.000	superfamily_ARM-type_fold	pfam_Tscrpt_C,superfamily_ARM-type_fold	-	no_errors	MMS19	HGNC	ENSG00000155229	tier1	-	-	47	0	0.00	45	4	8.16
MMS19	0	genome.wustl.edu	37	10	99225566	99225566	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	99225566	99225566	G	T	SNP	MMS19	ENST00000370782	human	ensembl	74_37	-1	known	missense	c.1752	p.N584K	1.000	superfamily_ARM-type_fold	pfam_Tscrpt_C,superfamily_ARM-type_fold	-	no_errors	MMS19	HGNC	ENSG00000155229	tier1	-	-	55	0	0.00	45	4	8.16
MMS19	0	genome.wustl.edu	37	10	99225902	99225902	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	99225902	99225902	A	T	SNP	MMS19	ENST00000370782	human	ensembl	74_37	-1	known	missense	c.1520	p.L507Q	1.000	superfamily_ARM-type_fold	pfam_Tscrpt_C,superfamily_ARM-type_fold	-	no_errors	MMS19	HGNC	ENSG00000155229	tier1	-	-	21	0	0.00	11	4	26.67
MMS19	0	genome.wustl.edu	37	10	99225902	99225902	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	99225902	99225902	A	T	SNP	MMS19	ENST00000370782	human	ensembl	74_37	-1	known	missense	c.1520	p.L507Q	1.000	superfamily_ARM-type_fold	pfam_Tscrpt_C,superfamily_ARM-type_fold	-	no_errors	MMS19	HGNC	ENSG00000155229	tier1	-	-	25	0	0.00	11	4	26.67
MOAP1	0	genome.wustl.edu	37	14	93650010	93650010	+	Frame_Shift_Del	DEL	T	T	-			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	93650010	93650010	T	-	DEL	MOAP1	ENST00000298894	human	ensembl	74_37	-1	known	frame_shift_del	c.578	p.K193fs	0.127	NULL	NULL	-	no_errors	MOAP1	HGNC	ENSG00000165943	tier1			46	0	0.00	11	2	15.38
MOXD1	0	genome.wustl.edu	37	6	132618392	132618392	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	132618392	132618392	C	A	SNP	MOXD1	ENST00000367963	human	ensembl	74_37	-1	known	missense	c.1742	p.C581F	0.923	NULL	pfam_Cu2_ascorb_mOase_N,pfam_DOMON_domain,superfamily_PHM/PNGase_F_dom,smart_DOMON_domain,pfscan_DOMON_domain,prints_Dopamine_b_mOase	-	no_errors	MOXD1	HGNC	ENSG00000079931	tier1	-	-	103	0	0.00	59	6	9.23
MOXD1	0	genome.wustl.edu	37	6	132618392	132618392	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	132618392	132618392	C	A	SNP	MOXD1	ENST00000367963	human	ensembl	74_37	-1	known	missense	c.1742	p.C581F	0.923	NULL	pfam_Cu2_ascorb_mOase_N,pfam_DOMON_domain,superfamily_PHM/PNGase_F_dom,smart_DOMON_domain,pfscan_DOMON_domain,prints_Dopamine_b_mOase	-	no_errors	MOXD1	HGNC	ENSG00000079931	tier1	-	-	82	0	0.00	59	6	9.23
MPDZ	0	genome.wustl.edu	37	9	13219624	13219624	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	13219624	13219624	T	G	SNP	MPDZ	ENST00000319217	human	ensembl	74_37	-1	known	missense	c.1020	p.E340D	0.669	NULL	pfam_PDZ,pfam_L27_2,superfamily_PDZ,smart_PDZ,pfscan_L27,pfscan_PDZ	-	no_errors	MPDZ	HGNC	ENSG00000107186	tier1	-	-	81	0	0.00	41	26	38.81
MPDZ	0	genome.wustl.edu	37	9	13219624	13219624	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	13219624	13219624	T	G	SNP	MPDZ	ENST00000319217	human	ensembl	74_37	-1	known	missense	c.1020	p.E340D	0.669	NULL	pfam_PDZ,pfam_L27_2,superfamily_PDZ,smart_PDZ,pfscan_L27,pfscan_PDZ	-	no_errors	MPDZ	HGNC	ENSG00000107186	tier1	-	-	94	0	0.00	41	26	38.81
MROH6	0	genome.wustl.edu	37	8	144654593	144654593	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	144654593	144654593	G	A	SNP	MROH6	ENST00000398882	human	ensembl	74_37	-1	known	nonsense	c.292	p.Q98*	0.668	NULL	superfamily_ARM-type_fold	-	no_errors	MROH6	HGNC	ENSG00000204839	tier1	-	-	150	0	0.00	56	74	56.92
MROH6	0	genome.wustl.edu	37	8	144654593	144654593	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	144654593	144654593	G	A	SNP	MROH6	ENST00000398882	human	ensembl	74_37	-1	known	nonsense	c.292	p.Q98*	0.668	NULL	superfamily_ARM-type_fold	-	no_errors	MROH6	HGNC	ENSG00000204839	tier1	-	-	208	0	0.00	56	74	56.92
MS4A14	0	genome.wustl.edu	37	11	60183454	60183454	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	60183454	60183454	A	C	SNP	MS4A14	ENST00000300187	human	ensembl	74_37	+1	known	missense	c.1013	p.K338T	0.000	NULL	pfam_CD20-like	-	no_errors	MS4A14	HGNC	ENSG00000166928				39	0	0.00	34	4	10.53
MSH4	0	genome.wustl.edu	37	1	76288110	76288110	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	76288110	76288110	T	C	SNP	MSH4	ENST00000263187	human	ensembl	74_37	+1	known	missense	c.1006	p.F336L	1.000	pfam_DNA_mismatch_repair_MutS_core,superfamily_DNA_mismatch_repair_MutS_core,smart_DNA_mismatch_repair_MutS_core	pfam_DNA_mismatch_repair_MutS_C,pfam_DNA_mismatch_repair_MutS_core,pfam_DNA_mmatch_repair_MutS_con_dom,pfam_DNA_mismatch_repair_MutS_clamp,superfamily_DNA_mismatch_repair_MutS_core,superfamily_P-loop_NTPase,superfamily_DNA_mmatch_repair_MutS_con_dom,smart_DNA_mismatch_repair_MutS_core,smart_DNA_mismatch_repair_MutS_C	-	no_errors	MSH4	HGNC	ENSG00000057468				85	0	0.00	46	4	8.00
MTPAP	0	genome.wustl.edu	37	10	30662712	30662712	+	RNA	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	30662712	30662712	C	G	SNP	MTPAP	ENST00000471055	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.013	-	-	-	no_errors	MTPAP	HGNC	ENSG00000107951	tier1	-	-	33	0	0.00	20	4	16.67
MTPAP	0	genome.wustl.edu	37	10	30662712	30662712	+	RNA	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	30662712	30662712	C	G	SNP	MTPAP	ENST00000471055	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.013	-	-	-	no_errors	MTPAP	HGNC	ENSG00000107951	tier1	-	-	34	0	0.00	20	4	16.67
MUC12	0	genome.wustl.edu	37	7	100634420	100634420	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	100634420	100634420	A	C	SNP	MUC12	ENST00000536621	human	ensembl	74_37	+1	known	missense	c.576	p.E192D	0.001	NULL	pfam_SEA_dom	-	no_errors	MUC12	HGNC	ENSG00000205277	tier1	-	-	157	0	0.00	296	46	13.45
MUC12	0	genome.wustl.edu	37	7	100634420	100634420	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	100634420	100634420	A	C	SNP	MUC12	ENST00000536621	human	ensembl	74_37	+1	known	missense	c.576	p.E192D	0.001	NULL	pfam_SEA_dom	-	no_errors	MUC12	HGNC	ENSG00000205277	tier1	-	-	184	0	0.00	296	46	13.45
MUC16	0	genome.wustl.edu	37	19	9046663	9046663	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	9046663	9046663	T	C	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	silent	c.34968	p.P11656	0.011	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	204	0	0.00	49	5	9.26
MUC16	0	genome.wustl.edu	37	19	9046663	9046663	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	9046663	9046663	T	C	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	silent	c.34968	p.P11656	0.011	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	238	0	0.00	49	5	9.26
MUC16	0	genome.wustl.edu	37	19	9073947	9073947	+	Frame_Shift_Del	DEL	C	C	-			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	9073947	9073947	C	-	DEL	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	frame_shift_del	c.13499	p.S4500fs	0.024	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1			52	0	0.00	44	7	13.73
MUC16	0	genome.wustl.edu	37	19	9073947	9073947	+	Frame_Shift_Del	DEL	C	C	-			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	9073947	9073947	C	-	DEL	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	frame_shift_del	c.13499	p.S4500fs	0.024	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1			59	0	0.00	44	7	13.73
MUC16	0	genome.wustl.edu	37	19	9075129	9075129	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	9075129	9075129	C	G	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.12317	p.S4106T	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	35	0	0.00	41	10	19.61
MUC16	0	genome.wustl.edu	37	19	9075129	9075129	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	9075129	9075129	C	G	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.12317	p.S4106T	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	72	0	0.00	41	10	19.61
MUC16	0	genome.wustl.edu	37	19	9083064	9083064	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	9083064	9083064	A	C	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.8751	p.I2917M	0.004	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				58	0	0.00	35	4	10.26
MUC16	0	genome.wustl.edu	37	19	9089101	9089101	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	9089101	9089101	G	T	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.2714	p.P905H	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				72	0	0.00	43	3	6.52
MUC5B	0	genome.wustl.edu	37	11	1274134	1274134	+	Silent	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	1274134	1274134	C	T	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	silent	c.15150	p.V5050	0.006	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983	tier1	-	-	77	0	0.00	37	18	32.73
MUC5B	0	genome.wustl.edu	37	11	1274134	1274134	+	Silent	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	1274134	1274134	C	T	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	silent	c.15150	p.V5050	0.006	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983	tier1	-	-	87	0	0.00	37	18	32.73
MXRA5	0	genome.wustl.edu	37	X	3240213	3240213	+	Silent	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	3240213	3240213	G	T	SNP	MXRA5	ENST00000217939	human	ensembl	74_37	-1	known	silent	c.3513	p.P1171	0.000	NULL	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	MXRA5	HGNC	ENSG00000101825	tier1	-	-	20	0	0.00	34	6	15.00
MXRA5	0	genome.wustl.edu	37	X	3240213	3240213	+	Silent	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	3240213	3240213	G	T	SNP	MXRA5	ENST00000217939	human	ensembl	74_37	-1	known	silent	c.3513	p.P1171	0.000	NULL	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	MXRA5	HGNC	ENSG00000101825	tier1	-	-	35	0	0.00	34	6	15.00
MXRA5	0	genome.wustl.edu	37	X	3240217	3240217	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	3240217	3240217	G	T	SNP	MXRA5	ENST00000217939	human	ensembl	74_37	-1	known	missense	c.3509	p.P1170Q	0.000	NULL	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	MXRA5	HGNC	ENSG00000101825	tier1	-	-	24	0	0.00	34	7	17.07
MXRA5	0	genome.wustl.edu	37	X	3240217	3240217	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	3240217	3240217	G	T	SNP	MXRA5	ENST00000217939	human	ensembl	74_37	-1	known	missense	c.3509	p.P1170Q	0.000	NULL	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	MXRA5	HGNC	ENSG00000101825	tier1	-	-	37	0	0.00	34	7	17.07
MYBPC3	0	genome.wustl.edu	37	11	47364601	47364601	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	47364601	47364601	T	C	SNP	MYBPC3	ENST00000399249	human	ensembl	74_37	-1	known	missense	c.1322	p.E441G	1.000	smart_Ig_sub,smart_Ig_sub2	pfam_Ig_I-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYBPC3	HGNC	ENSG00000134571	tier1	-	-	78	0	0.00	32	9	21.95
MYBPC3	0	genome.wustl.edu	37	11	47364601	47364601	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	47364601	47364601	T	C	SNP	MYBPC3	ENST00000399249	human	ensembl	74_37	-1	known	missense	c.1322	p.E441G	1.000	smart_Ig_sub,smart_Ig_sub2	pfam_Ig_I-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYBPC3	HGNC	ENSG00000134571	tier1	-	-	86	0	0.00	32	9	21.95
MYH1	0	genome.wustl.edu	37	17	10399820	10399820	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	10399820	10399820	T	G	SNP	MYH1	ENST00000226207	human	ensembl	74_37	-1	known	missense	c.4703	p.E1568A	1.000	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH1	HGNC	ENSG00000109061	tier1	-	-	52	0	0.00	53	13	19.70
MYH1	0	genome.wustl.edu	37	17	10399820	10399820	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	10399820	10399820	T	G	SNP	MYH1	ENST00000226207	human	ensembl	74_37	-1	known	missense	c.4703	p.E1568A	1.000	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH1	HGNC	ENSG00000109061	tier1	-	-	74	0	0.00	53	13	19.70
MYH7	0	genome.wustl.edu	37	14	23885406	23885406	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	23885406	23885406	T	G	SNP	MYH7	ENST00000355349	human	ensembl	74_37	-1	known	missense	c.4760	p.K1587T	1.000	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH7	HGNC	ENSG00000092054	tier1	-	-	53	0	0.00	16	10	38.46
MYH7	0	genome.wustl.edu	37	14	23885406	23885406	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	23885406	23885406	T	G	SNP	MYH7	ENST00000355349	human	ensembl	74_37	-1	known	missense	c.4760	p.K1587T	1.000	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH7	HGNC	ENSG00000092054	tier1	-	-	55	0	0.00	16	10	38.46
MYO3A	0	genome.wustl.edu	37	10	26462760	26462760	+	Frame_Shift_Del	DEL	A	A	-			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	26462760	26462760	A	-	DEL	MYO3A	ENST00000265944	human	ensembl	74_37	+1	known	frame_shift_del	c.3567	p.M1192fs	0.509	superfamily_P-loop_NTPase	pfam_Myosin_head_motor_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,pfscan_Prot_kinase_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO3A	HGNC	ENSG00000095777	tier1			42	0	0.00	46	20	30.30
MYO3A	0	genome.wustl.edu	37	10	26462760	26462760	+	Frame_Shift_Del	DEL	A	A	-			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	26462760	26462760	A	-	DEL	MYO3A	ENST00000265944	human	ensembl	74_37	+1	known	frame_shift_del	c.3567	p.M1192fs	0.509	superfamily_P-loop_NTPase	pfam_Myosin_head_motor_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,pfscan_Prot_kinase_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO3A	HGNC	ENSG00000095777	tier1			67	0	0.00	46	20	30.30
NAA16	0	genome.wustl.edu	37	13	41949637	41949637	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	13	41949637	41949637	C	T	SNP	NAA16	ENST00000379406	human	ensembl	74_37	+1	known	missense	c.2494	p.P832S	1.000	NULL	pfam_TPR_2,pfam_NatA_aux_su,pfam_TPR_1,smart_TPR_repeat,pirsf_NatA_aux_su,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	NAA16	HGNC	ENSG00000172766	tier1	-	-	54	0	0.00	59	4	6.25
NAA16	0	genome.wustl.edu	37	13	41949637	41949637	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	13	41949637	41949637	C	T	SNP	NAA16	ENST00000379406	human	ensembl	74_37	+1	known	missense	c.2494	p.P832S	1.000	NULL	pfam_TPR_2,pfam_NatA_aux_su,pfam_TPR_1,smart_TPR_repeat,pirsf_NatA_aux_su,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	NAA16	HGNC	ENSG00000172766	tier1	-	-	79	0	0.00	59	4	6.25
NAV2	0	genome.wustl.edu	37	11	20005691	20005691	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	20005691	20005691	T	G	SNP	NAV2	ENST00000396087	human	ensembl	74_37	+1	known	missense	c.2735	p.L912R	1.000	NULL	pfam_CH-domain,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV2	HGNC	ENSG00000166833	tier1	-	-	85	0	0.00	28	13	31.71
NAV2	0	genome.wustl.edu	37	11	20005691	20005691	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	20005691	20005691	T	G	SNP	NAV2	ENST00000396087	human	ensembl	74_37	+1	known	missense	c.2735	p.L912R	1.000	NULL	pfam_CH-domain,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV2	HGNC	ENSG00000166833	tier1	-	-	99	0	0.00	28	13	31.71
NBAS	0	genome.wustl.edu	37	2	15615819	15615819	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	15615819	15615819	T	A	SNP	NBAS	ENST00000281513	human	ensembl	74_37	-1	known	missense	c.1333	p.S445C	1.000	NULL	pfam_Sec39,superfamily_Quino_amine_DH_bsu	-	no_errors	NBAS	HGNC	ENSG00000151779	tier1	-	-	113	0	0.00	63	16	20.25
NBAS	0	genome.wustl.edu	37	2	15615819	15615819	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	15615819	15615819	T	A	SNP	NBAS	ENST00000281513	human	ensembl	74_37	-1	known	missense	c.1333	p.S445C	1.000	NULL	pfam_Sec39,superfamily_Quino_amine_DH_bsu	-	no_errors	NBAS	HGNC	ENSG00000151779	tier1	-	-	80	0	0.00	63	16	20.25
NBN	0	genome.wustl.edu	37	8	90983510	90983510	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	90983510	90983510	G	T	SNP	NBN	ENST00000265433	human	ensembl	74_37	-1	known	missense	c.593	p.P198Q	1.000	pirsf_Nibrin_met	pfam_DNA-repair_Nbs1_C,pfam_FHA_dom,superfamily_SMAD_FHA_domain,superfamily_BRCT_dom,smart_FHA_dom,pirsf_Nibrin_met,pfscan_FHA_dom	-	no_errors	NBN	HGNC	ENSG00000104320	tier1	-	-	59	0	0.00	86	5	5.49
NBPF10	0	genome.wustl.edu	37	1	145354324	145354324	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	145354324	145354324	G	A	SNP	NBPF10	ENST00000342960	human	ensembl	74_37	+1	known	missense	c.8252	p.G2751E	0.022	pfam_NBPF_dom	pfam_NBPF_dom	-	no_errors	NBPF10	HGNC	ENSG00000163386	tier1	-	-	11	0	0.00	16	6	27.27
NCKAP1L	0	genome.wustl.edu	37	12	54910699	54910699	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	54910699	54910699	C	T	SNP	NCKAP1L	ENST00000293373	human	ensembl	74_37	+1	known	missense	c.1018	p.R340W	1.000	pfam_Nck-associated_protein-1	pfam_Nck-associated_protein-1,superfamily_Nucl_hormone_rcpt_ligand-bd	-	no_errors	NCKAP1L	HGNC	ENSG00000123338	tier1	-	-	124	0	0.00	73	26	26.26
NDST3	0	genome.wustl.edu	37	4	119036076	119036076	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	119036076	119036076	T	C	SNP	NDST3	ENST00000296499	human	ensembl	74_37	+1	known	silent	c.1185	p.S395	0.138	pfam_Heparan_SO4_deacetylase	pfam_Heparan_SO4_deacetylase,pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	NDST3	HGNC	ENSG00000164100	tier1	-	-	216	0	0.00	141	40	22.10
NDST3	0	genome.wustl.edu	37	4	119036076	119036076	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	119036076	119036076	T	C	SNP	NDST3	ENST00000296499	human	ensembl	74_37	+1	known	silent	c.1185	p.S395	0.138	pfam_Heparan_SO4_deacetylase	pfam_Heparan_SO4_deacetylase,pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	NDST3	HGNC	ENSG00000164100	tier1	-	-	294	0	0.00	141	40	22.10
NELL1	0	genome.wustl.edu	37	11	20948936	20948936	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	20948936	20948936	G	T	SNP	NELL1	ENST00000357134	human	ensembl	74_37	+1	known	missense	c.842	p.R281L	1.000	pfam_VWF_C,smart_VWC_out,smart_VWF_C,pfscan_VWF_C	pfam_EGF-like_Ca-bd_dom,pfam_VWF_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_VWC_out,smart_VWF_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_VWF_C	-	no_errors	NELL1	HGNC	ENSG00000165973				88	0	0.00	72	4	5.26
NEO1	0	genome.wustl.edu	37	15	73566202	73566202	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	73566202	73566202	G	A	SNP	NEO1	ENST00000261908	human	ensembl	74_37	+1	known	missense	c.3016	p.V1006I	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Neogenin_C,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	NEO1	HGNC	ENSG00000067141	tier1	-	-	45	0	0.00	35	9	20.45
NEO1	0	genome.wustl.edu	37	15	73566202	73566202	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	73566202	73566202	G	A	SNP	NEO1	ENST00000261908	human	ensembl	74_37	+1	known	missense	c.3016	p.V1006I	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Neogenin_C,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	NEO1	HGNC	ENSG00000067141	tier1	-	-	68	0	0.00	35	9	20.45
NEO1	0	genome.wustl.edu	37	15	73580673	73580673	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	73580673	73580673	T	A	SNP	NEO1	ENST00000261908	human	ensembl	74_37	+1	known	missense	c.3430	p.S1144T	1.000	pfam_Neogenin_C	pfam_Neogenin_C,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	NEO1	HGNC	ENSG00000067141	tier1	-	-	94	0	0.00	42	9	17.65
NEO1	0	genome.wustl.edu	37	15	73580673	73580673	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	73580673	73580673	T	A	SNP	NEO1	ENST00000261908	human	ensembl	74_37	+1	known	missense	c.3430	p.S1144T	1.000	pfam_Neogenin_C	pfam_Neogenin_C,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	NEO1	HGNC	ENSG00000067141	tier1	-	-	95	0	0.00	42	9	17.65
NEUROD4	0	genome.wustl.edu	37	12	55420233	55420233	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	55420233	55420233	A	C	SNP	NEUROD4	ENST00000242994	human	ensembl	74_37	+1	known	missense	c.10	p.T4P	0.166	pirsf_TF_bHLH_NeuroD	pfam_Neurogenic_DUF,pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pirsf_TF_bHLH_NeuroD,pfscan_bHLH_dom	-	no_errors	NEUROD4	HGNC	ENSG00000123307	tier1	-	-	123	0	0.00	79	28	26.17
NEUROD4	0	genome.wustl.edu	37	12	55420233	55420233	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	55420233	55420233	A	C	SNP	NEUROD4	ENST00000242994	human	ensembl	74_37	+1	known	missense	c.10	p.T4P	0.166	pirsf_TF_bHLH_NeuroD	pfam_Neurogenic_DUF,pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pirsf_TF_bHLH_NeuroD,pfscan_bHLH_dom	-	no_errors	NEUROD4	HGNC	ENSG00000123307	tier1	-	-	77	0	0.00	79	28	26.17
NFIB	0	genome.wustl.edu	37	9	14125636	14125636	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	14125636	14125636	T	A	SNP	NFIB	ENST00000397581	human	ensembl	74_37	-1	known	missense	c.1055	p.H352L	1.000	pfam_CTF/NFI	pfam_CTF/NFI,pfam_CTF/NFI_DNA-bd_N,pfam_MAD_homology1_Dwarfin-type,smart_MAD_homology1_Dwarfin-type,pfscan_CTF/NFI_DNA-bd-dom	-	no_errors	NFIB	HGNC	ENSG00000147862	tier1	-	-	146	0	0.00	63	4	5.97
NFIB	0	genome.wustl.edu	37	9	14125636	14125636	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	14125636	14125636	T	A	SNP	NFIB	ENST00000397581	human	ensembl	74_37	-1	known	missense	c.1055	p.H352L	1.000	pfam_CTF/NFI	pfam_CTF/NFI,pfam_CTF/NFI_DNA-bd_N,pfam_MAD_homology1_Dwarfin-type,smart_MAD_homology1_Dwarfin-type,pfscan_CTF/NFI_DNA-bd-dom	-	no_errors	NFIB	HGNC	ENSG00000147862	tier1	-	-	89	0	0.00	63	4	5.97
NFXL1	0	genome.wustl.edu	37	4	47857176	47857176	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	47857176	47857176	G	T	SNP	NFXL1	ENST00000381538	human	ensembl	74_37	-1	known	missense	c.2321	p.P774H	1.000	NULL	pfam_Znf_NFX1,smart_Znf_NFX1,pfscan_Znf_RING	-	no_errors	NFXL1	HGNC	ENSG00000170448	tier1	-	-	36	0	0.00	49	4	7.55
NHS	0	genome.wustl.edu	37	X	17746822	17746822	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	17746822	17746822	G	T	SNP	NHS	ENST00000380060	human	ensembl	74_37	+1	known	missense	c.4213	p.A1405S	0.994	NULL	NULL	-	no_errors	NHS	HGNC	ENSG00000188158	tier1	-	-	42	0	0.00	33	4	10.81
NHSL2	0	genome.wustl.edu	37	X	71363114	71363114	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	71363114	71363114	A	C	SNP	NHSL2	ENST00000540800	human	ensembl	74_37	+1	known	missense	c.3368	p.K1123T	1.000	NULL	NULL	-	no_errors	NHSL2	HGNC	ENSG00000204131				67	0	0.00	67	4	5.63
NIPAL2	0	genome.wustl.edu	37	8	99205159	99205159	+	RNA	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	99205159	99205159	A	T	SNP	NIPAL2	ENST00000520545	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.825	-	-	-	no_errors	NIPAL2	HGNC	ENSG00000104361	tier1	-	-	58	0	0.00	51	6	10.53
NIPAL2	0	genome.wustl.edu	37	8	99205159	99205159	+	RNA	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	99205159	99205159	A	T	SNP	NIPAL2	ENST00000520545	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.825	-	-	-	no_errors	NIPAL2	HGNC	ENSG00000104361	tier1	-	-	89	0	0.00	51	6	10.53
NIPBL	0	genome.wustl.edu	37	5	37006532	37006532	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	37006532	37006532	C	T	SNP	NIPBL	ENST00000282516	human	ensembl	74_37	+1	known	missense	c.3929	p.A1310V	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	NIPBL	HGNC	ENSG00000164190	tier1	-	-	53	0	0.00	52	4	7.14
NIPBL	0	genome.wustl.edu	37	5	37006532	37006532	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	37006532	37006532	C	T	SNP	NIPBL	ENST00000282516	human	ensembl	74_37	+1	known	missense	c.3929	p.A1310V	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	NIPBL	HGNC	ENSG00000164190	tier1	-	-	96	0	0.00	52	4	7.14
NKX3-2	0	genome.wustl.edu	37	4	13544075	13544075	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	13544075	13544075	C	T	SNP	NKX3-2	ENST00000382438	human	ensembl	74_37	-1	known	missense	c.544	p.G182S	0.015	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	NKX3-2	HGNC	ENSG00000109705	tier1	-	-	37	0	0.00	18	14	43.75
NKX3-2	0	genome.wustl.edu	37	4	13544075	13544075	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	13544075	13544075	C	T	SNP	NKX3-2	ENST00000382438	human	ensembl	74_37	-1	known	missense	c.544	p.G182S	0.015	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	NKX3-2	HGNC	ENSG00000109705	tier1	-	-	45	0	0.00	18	14	43.75
NLRP13	0	genome.wustl.edu	37	19	56443411	56443411	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	56443411	56443411	G	T	SNP	NLRP13	ENST00000342929	human	ensembl	74_37	-1	known	missense	c.267	p.F89L	0.000	pfam_DAPIN,superfamily_DEATH-like_dom,pfscan_DAPIN	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP13	HGNC	ENSG00000173572				58	0	0.00	35	2	5.41
NME8	0	genome.wustl.edu	37	7	37890011	37890011	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	37890011	37890011	A	T	SNP	NME8	ENST00000199447	human	ensembl	74_37	+1	known	missense	c.65	p.E22V	1.000	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	pfam_Nucleoside_diP_kinase,pfam_Thioredoxin_domain,superfamily_Nucleoside_diP_kinase,superfamily_Thioredoxin-like_fold,smart_Nucleoside_diP_kinase	-	no_errors	NME8	HGNC	ENSG00000086288	tier1	-	-	80	0	0.00	58	29	32.95
NME8	0	genome.wustl.edu	37	7	37890011	37890011	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	37890011	37890011	A	T	SNP	NME8	ENST00000199447	human	ensembl	74_37	+1	known	missense	c.65	p.E22V	1.000	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	pfam_Nucleoside_diP_kinase,pfam_Thioredoxin_domain,superfamily_Nucleoside_diP_kinase,superfamily_Thioredoxin-like_fold,smart_Nucleoside_diP_kinase	-	no_errors	NME8	HGNC	ENSG00000086288	tier1	-	-	97	0	0.00	58	29	32.95
NOMO2	0	genome.wustl.edu	37	16	18549921	18549921	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	18549921	18549921	G	T	SNP	NOMO2	ENST00000381474	human	ensembl	74_37	-1	known	missense	c.1147	p.H383N	1.000	pfam_DUF2012,superfamily_Carb-bd-like_fold	pfam_DUF2012,superfamily_Carb-bd-like_fold,superfamily_CarboxyPept-like_regulatory,superfamily_Collagen-bd_Cna_B-typ_dom	-	no_errors	NOMO2	HGNC	ENSG00000185164				162	0	0.00	91	8	8.00
NOP16	0	genome.wustl.edu	37	5	175813851	175813851	+	Nonsense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	175813851	175813851	A	T	SNP	NOP16	ENST00000389158	human	ensembl	74_37	-1	known	nonsense	c.276	p.Y92*	1.000	pfam_Ribosome_biogenesis_Nop16	pfam_Ribosome_biogenesis_Nop16	-	no_errors	NOP16	HGNC	ENSG00000048162	tier1	-	-	120	0	0.00	35	15	30.00
NOP16	0	genome.wustl.edu	37	5	175813851	175813851	+	Nonsense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	175813851	175813851	A	T	SNP	NOP16	ENST00000389158	human	ensembl	74_37	-1	known	nonsense	c.276	p.Y92*	1.000	pfam_Ribosome_biogenesis_Nop16	pfam_Ribosome_biogenesis_Nop16	-	no_errors	NOP16	HGNC	ENSG00000048162	tier1	-	-	75	0	0.00	35	15	30.00
NOSTRIN	0	genome.wustl.edu	37	2	169707381	169707381	+	Silent	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	169707381	169707381	C	G	SNP	NOSTRIN	ENST00000444448	human	ensembl	74_37	+1	known	silent	c.666	p.V222	0.001	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_FCH_dom,superfamily_SH3_domain,superfamily_HR1_rho-bd,smart_SH3_domain,pfscan_FCH_dom,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	NOSTRIN	HGNC	ENSG00000163072	tier1	-	-	37	0	0.00	37	6	13.95
NOSTRIN	0	genome.wustl.edu	37	2	169707381	169707381	+	Silent	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	169707381	169707381	C	G	SNP	NOSTRIN	ENST00000444448	human	ensembl	74_37	+1	known	silent	c.666	p.V222	0.001	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_FCH_dom,superfamily_SH3_domain,superfamily_HR1_rho-bd,smart_SH3_domain,pfscan_FCH_dom,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	NOSTRIN	HGNC	ENSG00000163072	tier1	-	-	46	0	0.00	37	6	13.95
NOTO	0	genome.wustl.edu	37	2	73435556	73435556	+	Silent	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	73435556	73435556	C	A	SNP	NOTO	ENST00000398468	human	ensembl	74_37	+1	known	silent	c.411	p.L137	0.027	superfamily_Homeodomain-like	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	NOTO	HGNC	ENSG00000214513	tier1	-	-	69	0	0.00	43	10	18.87
NPL	0	genome.wustl.edu	37	1	182787987	182787987	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	182787987	182787987	G	T	SNP	NPL	ENST00000258317	human	ensembl	74_37	+1	known	missense	c.646	p.V216L	1.000	pfam_DapA-like	pfam_DapA-like,prints_DapA-like	-	no_errors	NPL	HGNC	ENSG00000135838	tier1	-	-	28	0	0.00	44	4	8.33
NPL	0	genome.wustl.edu	37	1	182787987	182787987	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	182787987	182787987	G	T	SNP	NPL	ENST00000258317	human	ensembl	74_37	+1	known	missense	c.646	p.V216L	1.000	pfam_DapA-like	pfam_DapA-like,prints_DapA-like	-	no_errors	NPL	HGNC	ENSG00000135838	tier1	-	-	60	0	0.00	44	4	8.33
NR4A3	0	genome.wustl.edu	37	9	102625911	102625911	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	102625911	102625911	G	T	SNP	NR4A3	ENST00000330847	human	ensembl	74_37	+1	known	missense	c.1676	p.G559V	1.000	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_Retinoic_acid_rcpt	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_NOR1_rcpt,prints_Nuc_orph_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Retinoic_acid_rcpt	-	no_errors	NR4A3	HGNC	ENSG00000119508	tier1	-	-	41	0	0.00	27	3	10.00
NR4A3	0	genome.wustl.edu	37	9	102625911	102625911	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	102625911	102625911	G	T	SNP	NR4A3	ENST00000330847	human	ensembl	74_37	+1	known	missense	c.1676	p.G559V	1.000	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_Retinoic_acid_rcpt	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_NOR1_rcpt,prints_Nuc_orph_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Retinoic_acid_rcpt	-	no_errors	NR4A3	HGNC	ENSG00000119508	tier1	-	-	54	0	0.00	27	3	10.00
NRXN1	0	genome.wustl.edu	37	2	50779946	50779946	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	50779946	50779946	G	C	SNP	NRXN1	ENST00000402717	human	ensembl	74_37	-1	known	missense	c.1514	p.P505R	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN1	HGNC	ENSG00000179915	tier1	-	-	46	0	0.00	42	4	8.70
NRXN1	0	genome.wustl.edu	37	2	50779946	50779946	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	50779946	50779946	G	C	SNP	NRXN1	ENST00000402717	human	ensembl	74_37	-1	known	missense	c.1514	p.P505R	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN1	HGNC	ENSG00000179915	tier1	-	-	57	0	0.00	42	4	8.70
NSA2	0	genome.wustl.edu	37	5	74065074	74065074	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	74065074	74065074	A	G	SNP	NSA2	ENST00000296802	human	ensembl	74_37	+1	known	missense	c.227	p.K76R	1.000	pfam_Ribosomal_S8e/biogenesis_NSA2	pfam_Ribosomal_S8e/biogenesis_NSA2	-	no_errors	NSA2	HGNC	ENSG00000164346	tier1	-	-	32	0	0.00	44	10	18.52
NSA2	0	genome.wustl.edu	37	5	74065074	74065074	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	74065074	74065074	A	G	SNP	NSA2	ENST00000296802	human	ensembl	74_37	+1	known	missense	c.227	p.K76R	1.000	pfam_Ribosomal_S8e/biogenesis_NSA2	pfam_Ribosomal_S8e/biogenesis_NSA2	-	no_errors	NSA2	HGNC	ENSG00000164346	tier1	-	-	57	0	0.00	44	10	18.52
NUP210	0	genome.wustl.edu	37	3	13363225	13363225	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	13363225	13363225	A	C	SNP	NUP210	ENST00000254508	human	ensembl	74_37	-1	known	missense	c.5026	p.F1676V	0.606	NULL	pfam_Big_2,superfamily_Invasin/intimin_cell_adhesion,superfamily_Cadherin-like,smart_Big_2	-	no_errors	NUP210	HGNC	ENSG00000132182	tier1	-	-	36	0	0.00	30	11	26.83
NUP210	0	genome.wustl.edu	37	3	13363225	13363225	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	13363225	13363225	A	C	SNP	NUP210	ENST00000254508	human	ensembl	74_37	-1	known	missense	c.5026	p.F1676V	0.606	NULL	pfam_Big_2,superfamily_Invasin/intimin_cell_adhesion,superfamily_Cadherin-like,smart_Big_2	-	no_errors	NUP210	HGNC	ENSG00000132182	tier1	-	-	52	0	0.00	30	11	26.83
NUP98	0	genome.wustl.edu	37	11	3744539	3744539	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	3744539	3744539	T	C	SNP	NUP98	ENST00000324932	human	ensembl	74_37	-1	known	missense	c.1994	p.N665S	0.016	NULL	pfam_Nup96,pfam_Peptidase_S59,superfamily_Peptidase_S59	-	no_errors	NUP98	HGNC	ENSG00000110713	tier1	-	-	102	0	0.00	42	8	16.00
NUP98	0	genome.wustl.edu	37	11	3744539	3744539	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	3744539	3744539	T	C	SNP	NUP98	ENST00000324932	human	ensembl	74_37	-1	known	missense	c.1994	p.N665S	0.016	NULL	pfam_Nup96,pfam_Peptidase_S59,superfamily_Peptidase_S59	-	no_errors	NUP98	HGNC	ENSG00000110713	tier1	-	-	59	0	0.00	42	8	16.00
NUSAP1	0	genome.wustl.edu	37	15	41625228	41625228	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	41625228	41625228	G	T	SNP	NUSAP1	ENST00000559596	human	ensembl	74_37	+1	known	missense	c.73	p.G25C	1.000	NULL	NULL	-	no_errors	NUSAP1	HGNC	ENSG00000137804				79	0	0.00	62	4	6.06
OAS1	0	genome.wustl.edu	37	12	113354384	113354384	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	113354384	113354384	G	C	SNP	OAS1	ENST00000445409	human	ensembl	74_37	+1	known	missense	c.725	p.R242P	0.000	pfam_2-5-oligoAdlate_synth_1_dom2/C	pfam_2-5-oligoAdlate_synth_1_dom2/C,pfam_Nucleotidyltransferase,pfscan_2-5-oligoadenylate_synth_N	-	no_errors	OAS1	HGNC	ENSG00000089127	tier1	-	-	108	0	0.00	61	21	25.61
OAS1	0	genome.wustl.edu	37	12	113354384	113354384	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	113354384	113354384	G	C	SNP	OAS1	ENST00000445409	human	ensembl	74_37	+1	known	missense	c.725	p.R242P	0.000	pfam_2-5-oligoAdlate_synth_1_dom2/C	pfam_2-5-oligoAdlate_synth_1_dom2/C,pfam_Nucleotidyltransferase,pfscan_2-5-oligoadenylate_synth_N	-	no_errors	OAS1	HGNC	ENSG00000089127	tier1	-	-	87	0	0.00	61	21	25.61
OAT	0	genome.wustl.edu	37	10	126094007	126094007	+	Nonsense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	126094007	126094007	C	A	SNP	OAT	ENST00000368845	human	ensembl	74_37	-1	known	nonsense	c.646	p.E216*	1.000	pfam_Aminotrans_3,superfamily_PyrdxlP-dep_Trfase,tigrfam_Orn_aminotrans	pfam_Aminotrans_3,superfamily_PyrdxlP-dep_Trfase,tigrfam_Orn_aminotrans	-	no_errors	OAT	HGNC	ENSG00000065154	tier1	-	-	62	0	0.00	56	4	6.67
OAT	0	genome.wustl.edu	37	10	126094007	126094007	+	Nonsense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	126094007	126094007	C	A	SNP	OAT	ENST00000368845	human	ensembl	74_37	-1	known	nonsense	c.646	p.E216*	1.000	pfam_Aminotrans_3,superfamily_PyrdxlP-dep_Trfase,tigrfam_Orn_aminotrans	pfam_Aminotrans_3,superfamily_PyrdxlP-dep_Trfase,tigrfam_Orn_aminotrans	-	no_errors	OAT	HGNC	ENSG00000065154	tier1	-	-	91	0	0.00	56	4	6.67
OCLN	0	genome.wustl.edu	37	5	68849595	68849595	+	RNA	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	68849595	68849595	A	T	SNP	OCLN	ENST00000514370	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	OCLN	HGNC	ENSG00000197822	tier1	-	-	122	0	0.00	84	10	10.64
OCLN	0	genome.wustl.edu	37	5	68849595	68849595	+	RNA	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	68849595	68849595	A	T	SNP	OCLN	ENST00000514370	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	OCLN	HGNC	ENSG00000197822	tier1	-	-	90	0	0.00	84	10	10.64
OLFM1	0	genome.wustl.edu	37	9	138011558	138011558	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	138011558	138011558	T	A	SNP	OLFM1	ENST00000371793	human	ensembl	74_37	+1	known	missense	c.992	p.L331H	1.000	pfam_Olfac-like,superfamily_Quinonprotein_ADH-like_supfam,smart_Olfac-like,pfscan_Olfac-like	pfam_Olfac-like,pfam_Noelin-1,superfamily_Quinonprotein_ADH-like_supfam,smart_Olfac-like,pfscan_Olfac-like	-	no_errors	OLFM1	HGNC	ENSG00000130558	tier1	-	-	41	0	0.00	30	9	23.08
OLFM1	0	genome.wustl.edu	37	9	138011558	138011558	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	138011558	138011558	T	A	SNP	OLFM1	ENST00000371793	human	ensembl	74_37	+1	known	missense	c.992	p.L331H	1.000	pfam_Olfac-like,superfamily_Quinonprotein_ADH-like_supfam,smart_Olfac-like,pfscan_Olfac-like	pfam_Olfac-like,pfam_Noelin-1,superfamily_Quinonprotein_ADH-like_supfam,smart_Olfac-like,pfscan_Olfac-like	-	no_errors	OLFM1	HGNC	ENSG00000130558	tier1	-	-	52	0	0.00	30	9	23.08
OLFM3	0	genome.wustl.edu	37	1	102269549	102269549	+	RNA	DEL	T	T	-			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	102269549	102269549	T	-	DEL	OLFM3	ENST00000462354	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.475	-	-	-	no_errors	OLFM3	HGNC	ENSG00000118733	tier1			10	0	0.00	19	8	29.63
OPTN	0	genome.wustl.edu	37	10	13161018	13161018	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	13161018	13161018	G	A	SNP	OPTN	ENST00000263036	human	ensembl	74_37	+1	known	missense	c.757	p.A253T	0.222	NULL	pfam_NEMO_N	-	no_errors	OPTN	HGNC	ENSG00000123240	tier1	-	-	78	0	0.00	72	4	5.26
OPTN	0	genome.wustl.edu	37	10	13161018	13161018	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	13161018	13161018	G	A	SNP	OPTN	ENST00000263036	human	ensembl	74_37	+1	known	missense	c.757	p.A253T	0.222	NULL	pfam_NEMO_N	-	no_errors	OPTN	HGNC	ENSG00000123240	tier1	-	-	87	0	0.00	72	4	5.26
OR10J3	0	genome.wustl.edu	37	1	159284376	159284376	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	159284376	159284376	T	C	SNP	OR10J3	ENST00000332217	human	ensembl	74_37	-1	known	missense	c.74	p.K25R	0.062	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10J3	HGNC	ENSG00000196266	tier1	-	-	60	0	0.00	43	9	17.31
OR14A2	0	genome.wustl.edu	37	1	247886430	247886430	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	247886430	247886430	T	C	SNP	OR14A2	ENST00000366485	human	ensembl	74_37	-1	known	missense	c.916	p.T306A	0.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR14A2	HGNC	ENSG00000241128	tier1	-	-	67	0	0.00	69	5	6.76
OR14A2	0	genome.wustl.edu	37	1	247886430	247886430	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	247886430	247886430	T	C	SNP	OR14A2	ENST00000366485	human	ensembl	74_37	-1	known	missense	c.916	p.T306A	0.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR14A2	HGNC	ENSG00000241128	tier1	-	-	97	0	0.00	69	5	6.76
OR2J3	0	genome.wustl.edu	37	6	29080488	29080488	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	29080488	29080488	G	A	SNP	OR2J3	ENST00000377169	human	ensembl	74_37	+1	known	missense	c.821	p.G274D	0.014	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2J3	HGNC	ENSG00000204701	tier1	-	-	25	0	0.00	35	6	14.63
OR2J3	0	genome.wustl.edu	37	6	29080488	29080488	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	29080488	29080488	G	A	SNP	OR2J3	ENST00000377169	human	ensembl	74_37	+1	known	missense	c.821	p.G274D	0.014	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2J3	HGNC	ENSG00000204701	tier1	-	-	32	0	0.00	35	6	14.63
OR2K2	0	genome.wustl.edu	37	9	114090461	114090461	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	114090461	114090461	A	C	SNP	OR2K2	ENST00000374428	human	ensembl	74_37	-1	known	missense	c.340	p.L114V	0.982	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2K2	HGNC	ENSG00000171133	tier1	-	-	23	0	0.00	30	8	21.05
OR2K2	0	genome.wustl.edu	37	9	114090461	114090461	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	114090461	114090461	A	C	SNP	OR2K2	ENST00000374428	human	ensembl	74_37	-1	known	missense	c.340	p.L114V	0.982	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2K2	HGNC	ENSG00000171133	tier1	-	-	47	0	0.00	30	8	21.05
OR2M2	0	genome.wustl.edu	37	1	248344067	248344067	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	248344067	248344067	A	G	SNP	OR2M2	ENST00000359682	human	ensembl	74_37	+1	known	missense	c.780	p.I260M	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2M2	HGNC	ENSG00000198601	tier1	-	-	120	0	0.00	97	16	14.16
OR2T4	0	genome.wustl.edu	37	1	248525601	248525601	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	248525601	248525601	T	A	SNP	OR2T4	ENST00000366475	human	ensembl	74_37	+1	known	missense	c.719	p.L240H	0.082	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T4	HGNC	ENSG00000196944	tier1	-	-	170	0	0.00	69	52	42.98
OR2T4	0	genome.wustl.edu	37	1	248525601	248525601	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	248525601	248525601	T	A	SNP	OR2T4	ENST00000366475	human	ensembl	74_37	+1	known	missense	c.719	p.L240H	0.082	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T4	HGNC	ENSG00000196944	tier1	-	-	179	0	0.00	69	52	42.98
OR2Z1	0	genome.wustl.edu	37	19	8841919	8841919	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	8841919	8841919	T	G	SNP	OR2Z1	ENST00000324060	human	ensembl	74_37	+1	known	missense	c.529	p.F177V	0.996	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2Z1	HGNC	ENSG00000181733	tier1	-	-	35	0	0.00	13	15	53.57
OR2Z1	0	genome.wustl.edu	37	19	8841919	8841919	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	8841919	8841919	T	G	SNP	OR2Z1	ENST00000324060	human	ensembl	74_37	+1	known	missense	c.529	p.F177V	0.996	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2Z1	HGNC	ENSG00000181733	tier1	-	-	62	0	0.00	13	15	53.57
OR4D6	0	genome.wustl.edu	37	11	59224556	59224556	+	Silent	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	59224556	59224556	A	G	SNP	OR4D6	ENST00000300127	human	ensembl	74_37	+1	known	silent	c.123	p.G41	0.274	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4D6	HGNC	ENSG00000166884	tier1	-	-	48	0	0.00	46	4	8.00
OR4D6	0	genome.wustl.edu	37	11	59224556	59224556	+	Silent	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	59224556	59224556	A	G	SNP	OR4D6	ENST00000300127	human	ensembl	74_37	+1	known	silent	c.123	p.G41	0.274	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4D6	HGNC	ENSG00000166884	tier1	-	-	86	0	0.00	46	4	8.00
OR4S2	0	genome.wustl.edu	37	11	55418905	55418905	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	55418905	55418905	T	A	SNP	OR4S2	ENST00000312422	human	ensembl	74_37	+1	known	missense	c.526	p.F176I	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4S2	HGNC	ENSG00000174982	tier1	-	-	34	0	0.00	28	8	22.22
OR4S2	0	genome.wustl.edu	37	11	55418905	55418905	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	55418905	55418905	T	A	SNP	OR4S2	ENST00000312422	human	ensembl	74_37	+1	known	missense	c.526	p.F176I	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4S2	HGNC	ENSG00000174982	tier1	-	-	41	0	0.00	28	8	22.22
OR52K1	0	genome.wustl.edu	37	11	4510950	4510950	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	4510950	4510950	G	T	SNP	OR52K1	ENST00000307632	human	ensembl	74_37	+1	known	missense	c.820	p.V274F	0.005	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52K1	HGNC	ENSG00000196778	tier1	-	-	47	0	0.00	28	11	28.21
OR5T2	0	genome.wustl.edu	37	11	56000497	56000497	+	Silent	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	56000497	56000497	G	T	SNP	OR5T2	ENST00000313264	human	ensembl	74_37	-1	known	silent	c.165	p.G55	0.464	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5T2	HGNC	ENSG00000181718				43	0	0.00	23	2	8.00
OR8H3	0	genome.wustl.edu	37	11	55890329	55890329	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	55890329	55890329	G	C	SNP	OR8H3	ENST00000313472	human	ensembl	74_37	+1	known	missense	c.481	p.V161L	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8H3	HGNC	ENSG00000181761	tier1	-	-	40	0	0.00	34	5	12.82
OR8H3	0	genome.wustl.edu	37	11	55890329	55890329	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	55890329	55890329	G	C	SNP	OR8H3	ENST00000313472	human	ensembl	74_37	+1	known	missense	c.481	p.V161L	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8H3	HGNC	ENSG00000181761	tier1	-	-	42	0	0.00	34	5	12.82
OR8J1	0	genome.wustl.edu	37	11	56128335	56128335	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	56128335	56128335	A	C	SNP	OR8J1	ENST00000303039	human	ensembl	74_37	+1	known	missense	c.613	p.T205P	0.677	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8J1	HGNC	ENSG00000172487	tier1	-	-	38	0	0.00	46	14	23.33
OR8J1	0	genome.wustl.edu	37	11	56128335	56128335	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	56128335	56128335	A	C	SNP	OR8J1	ENST00000303039	human	ensembl	74_37	+1	known	missense	c.613	p.T205P	0.677	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8J1	HGNC	ENSG00000172487	tier1	-	-	60	0	0.00	46	14	23.33
OSBPL6	0	genome.wustl.edu	37	2	179259041	179259041	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	179259041	179259041	T	G	SNP	OSBPL6	ENST00000315022	human	ensembl	74_37	+1	known	missense	c.2587	p.F863V	1.000	pfam_Oxysterol-bd	pfam_Oxysterol-bd,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBPL6	HGNC	ENSG00000079156	tier1	-	-	52	0	0.00	45	8	15.09
OSBPL6	0	genome.wustl.edu	37	2	179259041	179259041	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	179259041	179259041	T	G	SNP	OSBPL6	ENST00000315022	human	ensembl	74_37	+1	known	missense	c.2587	p.F863V	1.000	pfam_Oxysterol-bd	pfam_Oxysterol-bd,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBPL6	HGNC	ENSG00000079156	tier1	-	-	85	0	0.00	45	8	15.09
P2RY1	0	genome.wustl.edu	37	3	152554205	152554205	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	152554205	152554205	C	T	SNP	P2RY1	ENST00000305097	human	ensembl	74_37	+1	known	nonsense	c.634	p.R212*	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_P2Y1_rcpt,prints_GPCR_Rhodpsn	-	no_errors	P2RY1	HGNC	ENSG00000169860				55	0	0.00	35	2	5.41
PAN3	0	genome.wustl.edu	37	13	28840936	28840936	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	13	28840936	28840936	A	C	SNP	PAN3	ENST00000380958	human	ensembl	74_37	+1	known	missense	c.1496	p.N499T	1.000	superfamily_Kinase-like_dom,pfscan_Prot_kinase_dom	superfamily_Kinase-like_dom,smart_Znf_CCCH,pfscan_Prot_kinase_dom	-	no_errors	PAN3	HGNC	ENSG00000152520	tier1	-	-	59	0	0.00	58	9	13.43
PAN3	0	genome.wustl.edu	37	13	28840936	28840936	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	13	28840936	28840936	A	C	SNP	PAN3	ENST00000380958	human	ensembl	74_37	+1	known	missense	c.1496	p.N499T	1.000	superfamily_Kinase-like_dom,pfscan_Prot_kinase_dom	superfamily_Kinase-like_dom,smart_Znf_CCCH,pfscan_Prot_kinase_dom	-	no_errors	PAN3	HGNC	ENSG00000152520	tier1	-	-	64	0	0.00	58	9	13.43
PAQR5	0	genome.wustl.edu	37	15	69692375	69692375	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	69692375	69692375	G	A	SNP	PAQR5	ENST00000340965	human	ensembl	74_37	+1	known	missense	c.672	p.M224I	0.201	pfam_HlyIII-related	pfam_HlyIII-related	-	no_errors	PAQR5	HGNC	ENSG00000137819	tier1	-	-	42	0	0.00	26	5	16.13
PAQR5	0	genome.wustl.edu	37	15	69692375	69692375	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	69692375	69692375	G	A	SNP	PAQR5	ENST00000340965	human	ensembl	74_37	+1	known	missense	c.672	p.M224I	0.201	pfam_HlyIII-related	pfam_HlyIII-related	-	no_errors	PAQR5	HGNC	ENSG00000137819	tier1	-	-	58	0	0.00	26	5	16.13
PARD3	0	genome.wustl.edu	37	10	34601286	34601286	+	Silent	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	34601286	34601286	C	T	SNP	PARD3	ENST00000340077	human	ensembl	74_37	-1	known	silent	c.3090	p.K1030	1.000	NULL	pfam_DUF3534,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PARD3	HGNC	ENSG00000148498	tier1	-	-	124	0	0.00	92	14	13.21
PARD3	0	genome.wustl.edu	37	10	34601286	34601286	+	Silent	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	34601286	34601286	C	T	SNP	PARD3	ENST00000340077	human	ensembl	74_37	-1	known	silent	c.3090	p.K1030	1.000	NULL	pfam_DUF3534,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PARD3	HGNC	ENSG00000148498	tier1	-	-	94	0	0.00	92	14	13.21
PARP10	0	genome.wustl.edu	37	8	145059731	145059731	+	Silent	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	145059731	145059731	C	T	SNP	PARP10	ENST00000313028	human	ensembl	74_37	-1	known	silent	c.522	p.A174	0.000	NULL	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	PARP10	HGNC	ENSG00000178685	tier1	rs147869775	-	25	0	0.00	22	4	15.38
PARP8	0	genome.wustl.edu	37	5	50093060	50093060	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	50093060	50093060	T	G	SNP	PARP8	ENST00000281631	human	ensembl	74_37	+1	known	missense	c.1568	p.M523R	1.000	NULL	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	PARP8	HGNC	ENSG00000151883	tier1	-	-	47	0	0.00	30	5	13.89
PARP8	0	genome.wustl.edu	37	5	50093060	50093060	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	50093060	50093060	T	G	SNP	PARP8	ENST00000281631	human	ensembl	74_37	+1	known	missense	c.1568	p.M523R	1.000	NULL	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	PARP8	HGNC	ENSG00000151883	tier1	-	-	56	0	0.00	30	5	13.89
PAXBP1	0	genome.wustl.edu	37	21	34134584	34134584	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	21	34134584	34134584	G	T	SNP	PAXBP1	ENST00000331923	human	ensembl	74_37	-1	known	missense	c.694	p.R232S	1.000	NULL	pfam_GCFC_dom	-	no_errors	PAXBP1	HGNC	ENSG00000159086	tier1	-	-	44	0	0.00	42	4	8.70
PCDH15	0	genome.wustl.edu	37	10	55582821	55582821	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	55582821	55582821	T	C	SNP	PCDH15	ENST00000320301	human	ensembl	74_37	-1	known	silent	c.4665	p.K1555	0.059	NULL	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH15	HGNC	ENSG00000150275	tier1	-	-	41	0	0.00	27	16	37.21
PCDH15	0	genome.wustl.edu	37	10	55582821	55582821	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	55582821	55582821	T	C	SNP	PCDH15	ENST00000320301	human	ensembl	74_37	-1	known	silent	c.4665	p.K1555	0.059	NULL	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH15	HGNC	ENSG00000150275	tier1	-	-	54	0	0.00	27	16	37.21
PCDH15	0	genome.wustl.edu	37	10	55955475	55955475	+	Silent	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	55955475	55955475	T	G	SNP	PCDH15	ENST00000320301	human	ensembl	74_37	-1	known	silent	c.1273	p.R425	1.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH15	HGNC	ENSG00000150275	tier1	-	-	51	0	0.00	42	26	38.24
PCDH15	0	genome.wustl.edu	37	10	55955475	55955475	+	Silent	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	55955475	55955475	T	G	SNP	PCDH15	ENST00000320301	human	ensembl	74_37	-1	known	silent	c.1273	p.R425	1.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH15	HGNC	ENSG00000150275	tier1	-	-	80	0	0.00	42	26	38.24
PCDH20	0	genome.wustl.edu	37	13	61986873	61986873	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	13	61986873	61986873	A	C	SNP	PCDH20	ENST00000409186	human	ensembl	74_37	-1	known	missense	c.1359	p.F453L	1.000	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH20	HGNC	ENSG00000197991	tier1	-	-	36	0	0.00	31	5	13.89
PCDH20	0	genome.wustl.edu	37	13	61986873	61986873	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	13	61986873	61986873	A	C	SNP	PCDH20	ENST00000409186	human	ensembl	74_37	-1	known	missense	c.1359	p.F453L	1.000	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH20	HGNC	ENSG00000197991	tier1	-	-	43	0	0.00	31	5	13.89
PCDHA13	0	genome.wustl.edu	37	5	140264110	140264110	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	140264110	140264110	C	G	SNP	PCDHA13	ENST00000289272	human	ensembl	74_37	+1	known	missense	c.2257	p.Q753E	1.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA13	HGNC	ENSG00000239389	tier1	-	-	66	0	0.00	28	15	34.88
PCDHA13	0	genome.wustl.edu	37	5	140264110	140264110	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	140264110	140264110	C	G	SNP	PCDHA13	ENST00000289272	human	ensembl	74_37	+1	known	missense	c.2257	p.Q753E	1.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA13	HGNC	ENSG00000239389	tier1	-	-	86	0	0.00	28	15	34.88
PCDHB11	0	genome.wustl.edu	37	5	140581066	140581066	+	Silent	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	140581066	140581066	C	T	SNP	PCDHB11	ENST00000354757	human	ensembl	74_37	+1	known	silent	c.1719	p.T573	0.036	superfamily_Cadherin-like	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHB11	HGNC	ENSG00000197479	tier1	-	-	72	0	0.00	32	7	17.95
PCDHB11	0	genome.wustl.edu	37	5	140581066	140581066	+	Silent	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	140581066	140581066	C	T	SNP	PCDHB11	ENST00000354757	human	ensembl	74_37	+1	known	silent	c.1719	p.T573	0.036	superfamily_Cadherin-like	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHB11	HGNC	ENSG00000197479	tier1	-	-	80	0	0.00	32	7	17.95
PCDHB8	0	genome.wustl.edu	37	5	140559227	140559227	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	140559227	140559227	G	A	SNP	PCDHB8	ENST00000239444	human	ensembl	74_37	+1	known	missense	c.1612	p.G538S	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB8	HGNC	ENSG00000120322	tier1	-	-	433	0	0.00	242	46	15.97
PCDHGA8	0	genome.wustl.edu	37	5	140772817	140772817	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	140772817	140772817	C	T	SNP	PCDHGA8	ENST00000398604	human	ensembl	74_37	+1	known	missense	c.437	p.A146V	0.684	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA8	HGNC	ENSG00000253767				92	0	0.00	50	3	5.66
PCLO	0	genome.wustl.edu	37	7	82545247	82545247	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	82545247	82545247	T	C	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	missense	c.12055	p.S4019G	1.000	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472	tier1	-	-	36	0	0.00	32	19	37.25
PCLO	0	genome.wustl.edu	37	7	82545247	82545247	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	82545247	82545247	T	C	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	missense	c.12055	p.S4019G	1.000	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472	tier1	-	-	48	0	0.00	32	19	37.25
PCLO	0	genome.wustl.edu	37	7	82581924	82581924	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	82581924	82581924	G	T	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	nonsense	c.8345	p.S2782*	0.004	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472	tier1	-	-	39	0	0.00	64	4	5.88
PCLO	0	genome.wustl.edu	37	7	82581924	82581924	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	82581924	82581924	G	T	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	nonsense	c.8345	p.S2782*	0.004	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472	tier1	-	-	63	0	0.00	64	4	5.88
PCLO	0	genome.wustl.edu	37	7	82585562	82585562	+	Silent	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	82585562	82585562	A	C	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	silent	c.4707	p.A1569	0.936	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472	tier1	-	-	32	0	0.00	44	18	29.03
PCLO	0	genome.wustl.edu	37	7	82585562	82585562	+	Silent	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	82585562	82585562	A	C	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	silent	c.4707	p.A1569	0.936	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472	tier1	-	-	69	0	0.00	44	18	29.03
PCNT	0	genome.wustl.edu	37	21	47783564	47783564	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	21	47783564	47783564	G	C	SNP	PCNT	ENST00000359568	human	ensembl	74_37	+1	known	missense	c.2324	p.R775T	0.028	NULL	pfam_PACT_domain	-	no_errors	PCNT	HGNC	ENSG00000160299				84	0	0.00	54	4	6.90
PCNX	0	genome.wustl.edu	37	14	71413732	71413732	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	71413732	71413732	T	G	SNP	PCNX	ENST00000304743	human	ensembl	74_37	+1	known	missense	c.254	p.L85R	0.974	NULL	pfam_Pecanex	-	no_errors	PCNX	HGNC	ENSG00000100731	tier1	-	-	45	0	0.00	47	5	9.62
PCNX	0	genome.wustl.edu	37	14	71413732	71413732	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	71413732	71413732	T	G	SNP	PCNX	ENST00000304743	human	ensembl	74_37	+1	known	missense	c.254	p.L85R	0.974	NULL	pfam_Pecanex	-	no_errors	PCNX	HGNC	ENSG00000100731	tier1	-	-	72	0	0.00	47	5	9.62
PDCD1LG2	0	genome.wustl.edu	37	9	5549493	5549493	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	5549493	5549493	T	A	SNP	PDCD1LG2	ENST00000397747	human	ensembl	74_37	+1	known	missense	c.520	p.Y174N	1.000	pfam_CD80_C2-set,pfscan_Ig-like_dom	pfam_CD80_C2-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	PDCD1LG2	HGNC	ENSG00000197646	tier1	-	-	112	0	0.00	42	5	10.64
PDCD1LG2	0	genome.wustl.edu	37	9	5549493	5549493	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	5549493	5549493	T	A	SNP	PDCD1LG2	ENST00000397747	human	ensembl	74_37	+1	known	missense	c.520	p.Y174N	1.000	pfam_CD80_C2-set,pfscan_Ig-like_dom	pfam_CD80_C2-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	PDCD1LG2	HGNC	ENSG00000197646	tier1	-	-	91	0	0.00	42	5	10.64
PDE4DIP	0	genome.wustl.edu	37	1	144931675	144931675	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	144931675	144931675	G	T	SNP	PDE4DIP	ENST00000313431	human	ensembl	74_37	-1	known	missense	c.34	p.L12M	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	PDE4DIP	HGNC	ENSG00000178104				108	0	0.00	69	4	5.48
PDZD2	0	genome.wustl.edu	37	5	31983269	31983269	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	31983269	31983269	C	A	SNP	PDZD2	ENST00000282493	human	ensembl	74_37	+1	known	missense	c.485	p.A162D	1.000	superfamily_PDZ,smart_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD2	HGNC	ENSG00000133401	tier1	-	-	107	0	0.00	45	11	19.64
PDZD2	0	genome.wustl.edu	37	5	31983269	31983269	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	31983269	31983269	C	A	SNP	PDZD2	ENST00000282493	human	ensembl	74_37	+1	known	missense	c.485	p.A162D	1.000	superfamily_PDZ,smart_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD2	HGNC	ENSG00000133401	tier1	-	-	84	0	0.00	45	11	19.64
PDZRN3	0	genome.wustl.edu	37	3	73673724	73673724	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	73673724	73673724	C	T	SNP	PDZRN3	ENST00000263666	human	ensembl	74_37	-1	known	missense	c.253	p.A85T	1.000	superfamily_TRAF-like	pfam_PDZ,pfam_Znf_C3HC4_RING-type,superfamily_PDZ,superfamily_TRAF-like,smart_Znf_RING,smart_PDZ,pfscan_PDZ,pfscan_Znf_RING,pfscan_Znf_TRAF	-	no_errors	PDZRN3	HGNC	ENSG00000121440	tier1	-	-	59	0	0.00	29	14	32.56
PDZRN3	0	genome.wustl.edu	37	3	73673724	73673724	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	73673724	73673724	C	T	SNP	PDZRN3	ENST00000263666	human	ensembl	74_37	-1	known	missense	c.253	p.A85T	1.000	superfamily_TRAF-like	pfam_PDZ,pfam_Znf_C3HC4_RING-type,superfamily_PDZ,superfamily_TRAF-like,smart_Znf_RING,smart_PDZ,pfscan_PDZ,pfscan_Znf_RING,pfscan_Znf_TRAF	-	no_errors	PDZRN3	HGNC	ENSG00000121440	tier1	-	-	73	0	0.00	29	14	32.56
PELP1	0	genome.wustl.edu	37	17	4578413	4578413	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	4578413	4578413	C	T	SNP	PELP1	ENST00000301396	human	ensembl	74_37	-1	known	missense	c.1667	p.G556D	0.959	NULL	pfam_Uncharacterised_NUC202,superfamily_ARM-type_fold	-	no_errors	PELP1	HGNC	ENSG00000141456	tier1	-	-	123	0	0.00	73	5	6.41
PGBD1	0	genome.wustl.edu	37	6	28269577	28269577	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	28269577	28269577	C	G	SNP	PGBD1	ENST00000259883	human	ensembl	74_37	+1	known	missense	c.1946	p.T649R	0.855	NULL	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,pfscan_SRCR,pfscan_Tscrpt_reg_SCAN	-	no_errors	PGBD1	HGNC	ENSG00000137338				61	0	0.00	53	3	5.36
PGLYRP2	0	genome.wustl.edu	37	19	15586453	15586453	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	15586453	15586453	A	G	SNP	PGLYRP2	ENST00000292609	human	ensembl	74_37	-1	known	missense	c.1028	p.L343P	0.952	NULL	pfam_Amidase_domain,superfamily_Amidase_domain,smart_PGRP_domain_met/bac,smart_Amidase_domain	-	no_errors	PGLYRP2	HGNC	ENSG00000161031	tier1	-	-	51	0	0.00	35	15	30.00
PGLYRP2	0	genome.wustl.edu	37	19	15586453	15586453	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	15586453	15586453	A	G	SNP	PGLYRP2	ENST00000292609	human	ensembl	74_37	-1	known	missense	c.1028	p.L343P	0.952	NULL	pfam_Amidase_domain,superfamily_Amidase_domain,smart_PGRP_domain_met/bac,smart_Amidase_domain	-	no_errors	PGLYRP2	HGNC	ENSG00000161031	tier1	-	-	58	0	0.00	35	15	30.00
PHACTR4	0	genome.wustl.edu	37	1	28802646	28802646	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	28802646	28802646	A	C	SNP	PHACTR4	ENST00000373836	human	ensembl	74_37	+1	known	missense	c.1479	p.Q493H	0.000	NULL	pfam_RPEL_repeat,smart_RPEL_repeat,pfscan_RPEL_repeat	-	no_errors	PHACTR4	HGNC	ENSG00000204138	tier1	-	-	54	0	0.00	74	11	12.94
PHACTR4	0	genome.wustl.edu	37	1	28802646	28802646	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	28802646	28802646	A	C	SNP	PHACTR4	ENST00000373836	human	ensembl	74_37	+1	known	missense	c.1479	p.Q493H	0.000	NULL	pfam_RPEL_repeat,smart_RPEL_repeat,pfscan_RPEL_repeat	-	no_errors	PHACTR4	HGNC	ENSG00000204138	tier1	-	-	90	0	0.00	74	11	12.94
PHC3	0	genome.wustl.edu	37	3	169824725	169824725	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	169824725	169824725	T	G	SNP	PHC3	ENST00000495893	human	ensembl	74_37	-1	known	missense	c.2363	p.E788A	1.000	pfscan_Znf_FCS	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM,pfscan_Znf_FCS	-	no_errors	PHC3	HGNC	ENSG00000173889	tier1	-	-	104	0	0.00	102	6	5.56
PHC3	0	genome.wustl.edu	37	3	169824725	169824725	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	169824725	169824725	T	G	SNP	PHC3	ENST00000495893	human	ensembl	74_37	-1	known	missense	c.2363	p.E788A	1.000	pfscan_Znf_FCS	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM,pfscan_Znf_FCS	-	no_errors	PHC3	HGNC	ENSG00000173889	tier1	-	-	79	0	0.00	102	6	5.56
PIEZO2	0	genome.wustl.edu	37	18	10770275	10770275	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	18	10770275	10770275	G	T	SNP	PIEZO2	ENST00000582913	human	ensembl	74_37	-1	known	missense	c.2784	p.D928E	1.000	NULL	NULL	-	no_errors	PIEZO2	HGNC	ENSG00000154864	tier1	-	-	104	0	0.00	95	5	5.00
PIEZO2	0	genome.wustl.edu	37	18	10770275	10770275	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	18	10770275	10770275	G	T	SNP	PIEZO2	ENST00000582913	human	ensembl	74_37	-1	known	missense	c.2784	p.D928E	1.000	NULL	NULL	-	no_errors	PIEZO2	HGNC	ENSG00000154864	tier1	-	-	126	0	0.00	95	5	5.00
PIGR	0	genome.wustl.edu	37	1	207103697	207103697	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	207103697	207103697	G	T	SNP	PIGR	ENST00000356495	human	ensembl	74_37	-1	known	missense	c.2261	p.A754D	0.194	NULL	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	PIGR	HGNC	ENSG00000162896	tier1	-	-	47	0	0.00	41	4	8.89
PIGR	0	genome.wustl.edu	37	1	207103697	207103697	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	207103697	207103697	G	T	SNP	PIGR	ENST00000356495	human	ensembl	74_37	-1	known	missense	c.2261	p.A754D	0.194	NULL	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	PIGR	HGNC	ENSG00000162896	tier1	-	-	71	0	0.00	41	4	8.89
PIK3CA	0	genome.wustl.edu	37	3	178916946	178916946	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	178916946	178916946	G	T	SNP	PIK3CA	ENST00000263967	human	ensembl	74_37	+1	known	missense	c.333	p.K111N	1.000	NULL	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	tier1	-	-	35	0	0.00	54	7	11.48
PIK3CA	0	genome.wustl.edu	37	3	178916946	178916946	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	178916946	178916946	G	T	SNP	PIK3CA	ENST00000263967	human	ensembl	74_37	+1	known	missense	c.333	p.K111N	1.000	NULL	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	tier1	-	-	59	0	0.00	54	7	11.48
PIK3CA	0	genome.wustl.edu	37	3	178936091	178936091	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	178936091	178936091	G	A	SNP	PIK3CA	ENST00000263967	human	ensembl	74_37	+1	known	missense	c.1633	p.E545K	1.000	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	tier1	rs104886003	-	106	0	0.00	97	13	11.71
PIK3CA	0	genome.wustl.edu	37	3	178936091	178936091	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	178936091	178936091	G	A	SNP	PIK3CA	ENST00000263967	human	ensembl	74_37	+1	known	missense	c.1633	p.E545K	1.000	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	tier1	rs104886003	-	73	0	0.00	97	13	11.71
PIM2	0	genome.wustl.edu	37	X	48772479	48772479	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	48772479	48772479	C	T	SNP	PIM2	ENST00000376509	human	ensembl	74_37	-1	known	missense	c.413	p.G138D	0.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	PIM2	HGNC	ENSG00000102096	tier1	rs35044770	-	47	0	0.00	31	13	29.55
PIM2	0	genome.wustl.edu	37	X	48772479	48772479	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	48772479	48772479	C	T	SNP	PIM2	ENST00000376509	human	ensembl	74_37	-1	known	missense	c.413	p.G138D	0.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	PIM2	HGNC	ENSG00000102096	tier1	rs35044770	-	63	0	0.00	31	13	29.55
PIWIL1	0	genome.wustl.edu	37	12	130833811	130833811	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	130833811	130833811	T	C	SNP	PIWIL1	ENST00000245255	human	ensembl	74_37	+1	known	silent	c.762	p.T254	0.510	superfamily_PAZ_dom	pfam_Piwi,pfam_PAZ_dom,pfam_GAGE,superfamily_RNaseH-like_dom,superfamily_PAZ_dom,smart_PAZ_dom,smart_Piwi,pfscan_PAZ_dom,pfscan_Piwi	-	no_errors	PIWIL1	HGNC	ENSG00000125207	tier1	-	-	59	0	0.00	47	26	35.14
PIWIL1	0	genome.wustl.edu	37	12	130833811	130833811	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	130833811	130833811	T	C	SNP	PIWIL1	ENST00000245255	human	ensembl	74_37	+1	known	silent	c.762	p.T254	0.510	superfamily_PAZ_dom	pfam_Piwi,pfam_PAZ_dom,pfam_GAGE,superfamily_RNaseH-like_dom,superfamily_PAZ_dom,smart_PAZ_dom,smart_Piwi,pfscan_PAZ_dom,pfscan_Piwi	-	no_errors	PIWIL1	HGNC	ENSG00000125207	tier1	-	-	87	0	0.00	47	26	35.14
PKDREJ	0	genome.wustl.edu	37	22	46656636	46656636	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	22	46656636	46656636	A	G	SNP	PKDREJ	ENST00000253255	human	ensembl	74_37	-1	known	missense	c.2584	p.Y862H	0.001	pfscan_REJ-like	pfam_PKD1_2_channel,pfam_PKD/REJ-like,pfam_PLAT/LH2_dom,pfam_Ion_trans_dom,superfamily_Lipase_LipOase,smart_GPS_dom,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom,pfscan_REJ-like,prints_PKD_2	-	no_errors	PKDREJ	HGNC	ENSG00000130943				50	0	0.00	45	3	6.25
PKP4	0	genome.wustl.edu	37	2	159537122	159537122	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	159537122	159537122	T	C	SNP	PKP4	ENST00000389759	human	ensembl	74_37	+1	known	missense	c.3512	p.F1171S	1.000	NULL	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	PKP4	HGNC	ENSG00000144283	tier1	-	-	77	0	0.00	71	13	15.48
PKP4	0	genome.wustl.edu	37	2	159537122	159537122	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	159537122	159537122	T	C	SNP	PKP4	ENST00000389759	human	ensembl	74_37	+1	known	missense	c.3512	p.F1171S	1.000	NULL	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	PKP4	HGNC	ENSG00000144283	tier1	-	-	98	0	0.00	71	13	15.48
PLCB1	0	genome.wustl.edu	37	20	8630090	8630090	+	Silent	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	20	8630090	8630090	T	G	SNP	PLCB1	ENST00000338037	human	ensembl	74_37	+1	known	silent	c.588	p.S196	0.996	pirsf_PLC-beta	pirsf_PLC-beta,pfam_PLC-beta_C,pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,prints_Pinositol_PLipase_C,pfscan_C2_dom,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y	-	no_errors	PLCB1	HGNC	ENSG00000182621	tier1	-	-	51	0	0.00	56	4	6.67
PLCB1	0	genome.wustl.edu	37	20	8630090	8630090	+	Silent	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	20	8630090	8630090	T	G	SNP	PLCB1	ENST00000338037	human	ensembl	74_37	+1	known	silent	c.588	p.S196	0.996	pirsf_PLC-beta	pirsf_PLC-beta,pfam_PLC-beta_C,pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,prints_Pinositol_PLipase_C,pfscan_C2_dom,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y	-	no_errors	PLCB1	HGNC	ENSG00000182621	tier1	-	-	65	0	0.00	56	4	6.67
PLEKHA5	0	genome.wustl.edu	37	12	19423138	19423138	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	19423138	19423138	C	T	SNP	PLEKHA5	ENST00000429027	human	ensembl	74_37	+1	novel	nonsense	c.844	p.R282*	1.000	NULL	pfam_Pleckstrin_homology,superfamily_WW_dom,smart_WW_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_WW_dom	-	no_errors	PLEKHA5	HGNC	ENSG00000052126	tier1	-	-	65	0	0.00	69	4	5.48
PLEKHA5	0	genome.wustl.edu	37	12	19423138	19423138	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	19423138	19423138	C	T	SNP	PLEKHA5	ENST00000429027	human	ensembl	74_37	+1	novel	nonsense	c.844	p.R282*	1.000	NULL	pfam_Pleckstrin_homology,superfamily_WW_dom,smart_WW_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_WW_dom	-	no_errors	PLEKHA5	HGNC	ENSG00000052126	tier1	-	-	86	0	0.00	69	4	5.48
PLEKHM3	0	genome.wustl.edu	37	2	208841894	208841894	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	208841894	208841894	T	C	SNP	PLEKHM3	ENST00000427836	human	ensembl	74_37	-1	known	missense	c.1027	p.T343A	0.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHM3	HGNC	ENSG00000178385	tier1	-	-	41	0	0.00	29	8	21.62
PLEKHM3	0	genome.wustl.edu	37	2	208841894	208841894	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	208841894	208841894	T	C	SNP	PLEKHM3	ENST00000427836	human	ensembl	74_37	-1	known	missense	c.1027	p.T343A	0.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHM3	HGNC	ENSG00000178385	tier1	-	-	42	0	0.00	29	8	21.62
PLGLA	0	genome.wustl.edu	37	2	107004042	107004042	+	RNA	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	107004042	107004042	A	G	SNP	PLGLA	ENST00000482249	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.235	-	-	-	no_errors	PLGLA	HGNC	ENSG00000240935	tier1	-	-	238	0	0.00	245	49	16.67
PLRG1	0	genome.wustl.edu	37	4	155460362	155460362	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	155460362	155460362	C	A	SNP	PLRG1	ENST00000393905	human	ensembl	74_37	-1	known	missense	c.1046	p.S349I	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	PLRG1	HGNC	ENSG00000171566	tier1	-	-	51	0	0.00	40	22	35.48
PLRG1	0	genome.wustl.edu	37	4	155460362	155460362	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	155460362	155460362	C	A	SNP	PLRG1	ENST00000393905	human	ensembl	74_37	-1	known	missense	c.1046	p.S349I	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	PLRG1	HGNC	ENSG00000171566	tier1	-	-	76	0	0.00	40	22	35.48
PMPCB	0	genome.wustl.edu	37	7	102950884	102950884	+	Silent	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	102950884	102950884	C	A	SNP	PMPCB	ENST00000249269	human	ensembl	74_37	+1	known	silent	c.1116	p.S372	1.000	pfam_Peptidase_M16_C,superfamily_Metalloenz_LuxS/M16	pfam_Pept_M16_N,pfam_Peptidase_M16_C,superfamily_Metalloenz_LuxS/M16	-	no_errors	PMPCB	HGNC	ENSG00000105819	tier1	-	-	74	0	0.00	71	4	5.33
POLA2	0	genome.wustl.edu	37	11	65043451	65043451	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	65043451	65043451	C	T	SNP	POLA2	ENST00000265465	human	ensembl	74_37	+1	known	missense	c.443	p.P148L	0.993	pfam_Pol_alpha_B_N,pirsf_DNA_pol_alpha_bsu	pfam_Pol_alpha_B_N,pfam_DNA_pol_alpha/epsilon_bsu,pirsf_DNA_pol_alpha_bsu	-	no_errors	POLA2	HGNC	ENSG00000014138	tier1	-	-	101	0	0.00	58	12	17.14
POLA2	0	genome.wustl.edu	37	11	65043451	65043451	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	65043451	65043451	C	T	SNP	POLA2	ENST00000265465	human	ensembl	74_37	+1	known	missense	c.443	p.P148L	0.993	pfam_Pol_alpha_B_N,pirsf_DNA_pol_alpha_bsu	pfam_Pol_alpha_B_N,pfam_DNA_pol_alpha/epsilon_bsu,pirsf_DNA_pol_alpha_bsu	-	no_errors	POLA2	HGNC	ENSG00000014138	tier1	-	-	93	0	0.00	58	12	17.14
POLB	0	genome.wustl.edu	37	8	42207570	42207570	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	42207570	42207570	G	A	SNP	POLB	ENST00000265421	human	ensembl	74_37	+1	known	missense	c.307	p.V103I	1.000	pfam_DNA_pol_lambd_fingers_domain,superfamily_DNA_pol_lambd_fingers_domain,smart_DNA-dir_DNA_pol_X,smart_Hlx-hairpin-Hlx_DNA-bd_motif	pfam_DNA_pol_lambd_fingers_domain,superfamily_DNA_pol_b-like_N,superfamily_DNA_pol_lambd_fingers_domain,smart_DNA-dir_DNA_pol_X,smart_Hlx-hairpin-Hlx_DNA-bd_motif,prints_DNA_pol_X_beta-like,prints_DNA_pol_X	-	no_errors	POLB	HGNC	ENSG00000070501	tier1	-	-	59	0	0.00	24	14	36.84
POLB	0	genome.wustl.edu	37	8	42207570	42207570	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	42207570	42207570	G	A	SNP	POLB	ENST00000265421	human	ensembl	74_37	+1	known	missense	c.307	p.V103I	1.000	pfam_DNA_pol_lambd_fingers_domain,superfamily_DNA_pol_lambd_fingers_domain,smart_DNA-dir_DNA_pol_X,smart_Hlx-hairpin-Hlx_DNA-bd_motif	pfam_DNA_pol_lambd_fingers_domain,superfamily_DNA_pol_b-like_N,superfamily_DNA_pol_lambd_fingers_domain,smart_DNA-dir_DNA_pol_X,smart_Hlx-hairpin-Hlx_DNA-bd_motif,prints_DNA_pol_X_beta-like,prints_DNA_pol_X	-	no_errors	POLB	HGNC	ENSG00000070501	tier1	-	-	77	0	0.00	24	14	36.84
POLD2	0	genome.wustl.edu	37	7	44156030	44156030	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	44156030	44156030	C	T	SNP	POLD2	ENST00000406581	human	ensembl	74_37	-1	known	missense	c.860	p.S287N	0.989	pfam_DNA_pol_alpha/epsilon_bsu	pfam_DNA_pol_alpha/epsilon_bsu	-	no_errors	POLD2	HGNC	ENSG00000106628	tier1	-	-	42	0	0.00	30	13	30.23
POLD2	0	genome.wustl.edu	37	7	44156030	44156030	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	44156030	44156030	C	T	SNP	POLD2	ENST00000406581	human	ensembl	74_37	-1	known	missense	c.860	p.S287N	0.989	pfam_DNA_pol_alpha/epsilon_bsu	pfam_DNA_pol_alpha/epsilon_bsu	-	no_errors	POLD2	HGNC	ENSG00000106628	tier1	-	-	50	0	0.00	30	13	30.23
POLQ	0	genome.wustl.edu	37	3	121179011	121179011	+	Silent	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	121179011	121179011	A	C	SNP	POLQ	ENST00000264233	human	ensembl	74_37	-1	known	silent	c.7038	p.R2346	0.041	pfam_DNA-dir_DNA_pol_A_palm_dom,smart_DNA-dir_DNA_pol_A_palm_dom	pfam_DNA-dir_DNA_pol_A_palm_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_RNaseH-like_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_DNA-dir_DNA_pol_A_palm_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,prints_DNA_polymerase_A	-	no_errors	POLQ	HGNC	ENSG00000051341	tier1	-	-	33	0	0.00	25	5	16.67
POLQ	0	genome.wustl.edu	37	3	121179011	121179011	+	Silent	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	121179011	121179011	A	C	SNP	POLQ	ENST00000264233	human	ensembl	74_37	-1	known	silent	c.7038	p.R2346	0.041	pfam_DNA-dir_DNA_pol_A_palm_dom,smart_DNA-dir_DNA_pol_A_palm_dom	pfam_DNA-dir_DNA_pol_A_palm_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_RNaseH-like_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_DNA-dir_DNA_pol_A_palm_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,prints_DNA_polymerase_A	-	no_errors	POLQ	HGNC	ENSG00000051341	tier1	-	-	41	0	0.00	25	5	16.67
POLR3B	0	genome.wustl.edu	37	12	106898014	106898014	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	106898014	106898014	T	C	SNP	POLR3B	ENST00000228347	human	ensembl	74_37	+1	known	missense	c.3254	p.L1085P	1.000	pfam_RNA_pol_Rpb2_7	pfam_DNA-dir_RNA_pol_su2_6,pfam_RNA_pol_bsu_protrusion,pfam_RNA_pol_Rpb2_7,pfam_RNA_pol_Rpb2_2,pfam_RNA_pol_Rpb2_3,pfam_RNA_pol_Rpb2_4,pfam_RNA_pol_Rpb2_5	-	no_errors	POLR3B	HGNC	ENSG00000013503	tier1	-	-	69	0	0.00	27	10	27.03
POLR3H	0	genome.wustl.edu	37	22	41940092	41940092	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	22	41940092	41940092	A	C	SNP	POLR3H	ENST00000355209	human	ensembl	74_37	-1	known	missense	c.14	p.V5G	1.000	superfamily_RNA_pol_Rpb7_N,tigrfam_RNAP_E/RPC8	pfam_RNA_pol_III_Rbc25,pfam_RNA_pol_Rpb7_N,superfamily_RNA_pol_Rpb7_N,superfamily_NA-bd_OB-fold,tigrfam_RNAP_E/RPC8	-	no_errors	POLR3H	HGNC	ENSG00000100413	tier1	-	-	169	0	0.00	128	12	8.57
POLR3H	0	genome.wustl.edu	37	22	41940092	41940092	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	22	41940092	41940092	A	C	SNP	POLR3H	ENST00000355209	human	ensembl	74_37	-1	known	missense	c.14	p.V5G	1.000	superfamily_RNA_pol_Rpb7_N,tigrfam_RNAP_E/RPC8	pfam_RNA_pol_III_Rbc25,pfam_RNA_pol_Rpb7_N,superfamily_RNA_pol_Rpb7_N,superfamily_NA-bd_OB-fold,tigrfam_RNAP_E/RPC8	-	no_errors	POLR3H	HGNC	ENSG00000100413	tier1	-	-	198	0	0.00	128	12	8.57
POLR3H	0	genome.wustl.edu	37	22	41940093	41940093	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	22	41940093	41940093	C	A	SNP	POLR3H	ENST00000355209	human	ensembl	74_37	-1	known	missense	c.13	p.V5L	1.000	superfamily_RNA_pol_Rpb7_N,tigrfam_RNAP_E/RPC8	pfam_RNA_pol_III_Rbc25,pfam_RNA_pol_Rpb7_N,superfamily_RNA_pol_Rpb7_N,superfamily_NA-bd_OB-fold,tigrfam_RNAP_E/RPC8	-	no_errors	POLR3H	HGNC	ENSG00000100413	tier1	-	-	167	0	0.00	126	12	8.70
POLR3H	0	genome.wustl.edu	37	22	41940093	41940093	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	22	41940093	41940093	C	A	SNP	POLR3H	ENST00000355209	human	ensembl	74_37	-1	known	missense	c.13	p.V5L	1.000	superfamily_RNA_pol_Rpb7_N,tigrfam_RNAP_E/RPC8	pfam_RNA_pol_III_Rbc25,pfam_RNA_pol_Rpb7_N,superfamily_RNA_pol_Rpb7_N,superfamily_NA-bd_OB-fold,tigrfam_RNAP_E/RPC8	-	no_errors	POLR3H	HGNC	ENSG00000100413	tier1	-	-	198	0	0.00	126	12	8.70
POTEG	0	genome.wustl.edu	37	14	19571402	19571402	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	19571402	19571402	A	G	SNP	POTEG	ENST00000409832	human	ensembl	74_37	+1	known	missense	c.1181	p.E394G	0.221	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	POTEG	HGNC	ENSG00000222036	tier1	-	-	600	0	0.00	598	56	8.56
POTEG	0	genome.wustl.edu	37	14	19571402	19571402	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	19571402	19571402	A	G	SNP	POTEG	ENST00000409832	human	ensembl	74_37	+1	known	missense	c.1181	p.E394G	0.221	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	POTEG	HGNC	ENSG00000222036	tier1	-	-	945	0	0.00	598	56	8.56
POU3F2	0	genome.wustl.edu	37	6	99282803	99282803	+	Silent	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	99282803	99282803	C	A	SNP	POU3F2	ENST00000328345	human	ensembl	74_37	+1	known	silent	c.54	p.I18	1.000	pirsf_Transcription_factor_POU	pirsf_Transcription_factor_POU,pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU3F2	HGNC	ENSG00000184486	tier1	-	-	37	0	0.00	6	13	68.42
POU3F2	0	genome.wustl.edu	37	6	99282803	99282803	+	Silent	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	99282803	99282803	C	A	SNP	POU3F2	ENST00000328345	human	ensembl	74_37	+1	known	silent	c.54	p.I18	1.000	pirsf_Transcription_factor_POU	pirsf_Transcription_factor_POU,pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU3F2	HGNC	ENSG00000184486	tier1	-	-	43	0	0.00	6	13	68.42
POU4F3	0	genome.wustl.edu	37	5	145719175	145719175	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	145719175	145719175	C	T	SNP	POU4F3	ENST00000230732	human	ensembl	74_37	+1	known	missense	c.185	p.A62V	1.000	NULL	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU4F3	HGNC	ENSG00000091010	tier1	-	-	100	0	0.00	50	23	31.51
POU4F3	0	genome.wustl.edu	37	5	145719175	145719175	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	145719175	145719175	C	T	SNP	POU4F3	ENST00000230732	human	ensembl	74_37	+1	known	missense	c.185	p.A62V	1.000	NULL	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU4F3	HGNC	ENSG00000091010	tier1	-	-	127	0	0.00	50	23	31.51
PQBP1	0	genome.wustl.edu	37	X	48760385	48760385	+	RNA	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	48760385	48760385	G	T	SNP	PQBP1	ENST00000473764	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.046	-	-	-	no_errors	PQBP1	HGNC	ENSG00000102103	tier1	-	-	44	0	0.00	6	28	82.35
PQBP1	0	genome.wustl.edu	37	X	48760385	48760385	+	RNA	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	48760385	48760385	G	T	SNP	PQBP1	ENST00000473764	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.046	-	-	-	no_errors	PQBP1	HGNC	ENSG00000102103	tier1	-	-	48	0	0.00	6	28	82.35
PRAMEF1	0	genome.wustl.edu	37	1	12855998	12855998	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	12855998	12855998	T	A	SNP	PRAMEF1	ENST00000332296	human	ensembl	74_37	+1	known	missense	c.1278	p.N426K	0.000	NULL	NULL	-	no_errors	PRAMEF1	HGNC	ENSG00000116721	tier1	-	-	453	0	0.00	308	33	9.68
PRAMEF1	0	genome.wustl.edu	37	1	12855998	12855998	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	12855998	12855998	T	A	SNP	PRAMEF1	ENST00000332296	human	ensembl	74_37	+1	known	missense	c.1278	p.N426K	0.000	NULL	NULL	-	no_errors	PRAMEF1	HGNC	ENSG00000116721	tier1	-	-	503	0	0.00	308	33	9.68
PRAMEF6	0	genome.wustl.edu	37	1	13001286	13001286	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	13001286	13001286	T	G	SNP	PRAMEF6	ENST00000355096	human	ensembl	74_37	-1	known	missense	c.397	p.T133P	0.000	NULL	NULL	-	no_errors	PRAMEF6	HGNC	ENSG00000232423	tier1	-	-	749	0	0.00	387	42	9.77
PRAMEF6	0	genome.wustl.edu	37	1	13001306	13001306	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	13001306	13001306	A	C	SNP	PRAMEF6	ENST00000355096	human	ensembl	74_37	-1	known	missense	c.377	p.L126R	0.000	NULL	NULL	-	no_errors	PRAMEF6	HGNC	ENSG00000232423	tier1	-	-	600	0	0.00	313	44	12.29
PRAMEF6	0	genome.wustl.edu	37	1	13001306	13001306	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	13001306	13001306	A	C	SNP	PRAMEF6	ENST00000355096	human	ensembl	74_37	-1	known	missense	c.377	p.L126R	0.000	NULL	NULL	-	no_errors	PRAMEF6	HGNC	ENSG00000232423	tier1	-	-	629	0	0.00	313	44	12.29
PRB4	0	genome.wustl.edu	37	12	11461347	11461347	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	11461347	11461347	T	G	SNP	PRB4	ENST00000279575	human	ensembl	74_37	-1	known	missense	c.570	p.E190D	0.000	NULL	NULL	-	no_errors	PRB4	HGNC	ENSG00000230657	tier1	-	-	156	0	0.00	96	25	20.66
PRDM11	0	genome.wustl.edu	37	11	45204671	45204671	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	45204671	45204671	G	T	SNP	PRDM11	ENST00000263765	human	ensembl	74_37	+1	known	missense	c.585	p.W195C	1.000	pfscan_SET_dom	pfscan_SET_dom	-	no_errors	PRDM11	HGNC	ENSG00000019485	tier1	-	-	20	0	0.00	9	7	43.75
PRDM11	0	genome.wustl.edu	37	11	45204671	45204671	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	45204671	45204671	G	T	SNP	PRDM11	ENST00000263765	human	ensembl	74_37	+1	known	missense	c.585	p.W195C	1.000	pfscan_SET_dom	pfscan_SET_dom	-	no_errors	PRDM11	HGNC	ENSG00000019485	tier1	-	-	27	0	0.00	9	7	43.75
PRDX3	0	genome.wustl.edu	37	10	120933985	120933985	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	120933985	120933985	G	A	SNP	PRDX3	ENST00000298510	human	ensembl	74_37	-1	known	missense	c.289	p.L97F	1.000	pfam_AhpC/TSA,pfam_Redoxin,superfamily_Thioredoxin-like_fold	pfam_AhpC/TSA,pfam_Redoxin,pfam_Peroxiredoxin_C,superfamily_Thioredoxin-like_fold	-	no_errors	PRDX3	HGNC	ENSG00000165672	tier1	-	-	70	0	0.00	67	5	6.94
PRDX3	0	genome.wustl.edu	37	10	120933985	120933985	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	120933985	120933985	G	A	SNP	PRDX3	ENST00000298510	human	ensembl	74_37	-1	known	missense	c.289	p.L97F	1.000	pfam_AhpC/TSA,pfam_Redoxin,superfamily_Thioredoxin-like_fold	pfam_AhpC/TSA,pfam_Redoxin,pfam_Peroxiredoxin_C,superfamily_Thioredoxin-like_fold	-	no_errors	PRDX3	HGNC	ENSG00000165672	tier1	-	-	72	0	0.00	67	5	6.94
PREX2	0	genome.wustl.edu	37	8	68993022	68993022	+	Silent	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	68993022	68993022	C	T	SNP	PREX2	ENST00000288368	human	ensembl	74_37	+1	known	silent	c.1827	p.D609	1.000	superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_DH-domain,pfam_DEP_dom,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,smart_DH-domain,smart_Pleckstrin_homology,smart_DEP_dom,smart_PDZ,pfscan_DEP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PREX2	HGNC	ENSG00000046889	tier1	-	-	117	0	0.00	63	29	31.52
PRKD1	0	genome.wustl.edu	37	14	30105588	30105588	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	30105588	30105588	T	G	SNP	PRKD1	ENST00000331968	human	ensembl	74_37	-1	known	missense	c.1098	p.Q366H	0.293	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	PRKD1	HGNC	ENSG00000184304	tier1	-	-	46	0	0.00	29	4	12.12
PRKD1	0	genome.wustl.edu	37	14	30105588	30105588	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	30105588	30105588	T	G	SNP	PRKD1	ENST00000331968	human	ensembl	74_37	-1	known	missense	c.1098	p.Q366H	0.293	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	PRKD1	HGNC	ENSG00000184304	tier1	-	-	53	0	0.00	29	4	12.12
PRMT10	0	genome.wustl.edu	37	4	148575339	148575339	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	148575339	148575339	C	G	SNP	PRMT10	ENST00000322396	human	ensembl	74_37	-1	known	missense	c.1709	p.G570A	0.000	NULL	pfam_Ribosomal-L11_MeTrfase_PrmA,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	PRMT10	HGNC	ENSG00000164169	tier1	-	-	78	0	0.00	68	14	17.07
PRMT10	0	genome.wustl.edu	37	4	148575339	148575339	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	148575339	148575339	C	G	SNP	PRMT10	ENST00000322396	human	ensembl	74_37	-1	known	missense	c.1709	p.G570A	0.000	NULL	pfam_Ribosomal-L11_MeTrfase_PrmA,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	PRMT10	HGNC	ENSG00000164169	tier1	-	-	83	0	0.00	68	14	17.07
PRMT5-AS1	0	genome.wustl.edu	37	14	23390008	23390008	+	RNA	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	23390008	23390008	C	T	SNP	PRMT5-AS1	ENST00000424245	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.486	-	-	-	no_errors	PRMT5-AS1	HGNC	ENSG00000237054	tier1	-	-	52	0	0.00	23	9	28.12
PRMT5-AS1	0	genome.wustl.edu	37	14	23390008	23390008	+	RNA	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	23390008	23390008	C	T	SNP	PRMT5-AS1	ENST00000424245	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.486	-	-	-	no_errors	PRMT5-AS1	HGNC	ENSG00000237054	tier1	-	-	56	0	0.00	23	9	28.12
PRPF40B	0	genome.wustl.edu	37	12	50030498	50030498	+	Splice_Site	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	50030498	50030498	G	A	SNP	PRPF40B	ENST00000548825	human	ensembl	74_37	+1	known	splice_site	c.1427-1	e16-1	1.000	-	-	-	no_errors	PRPF40B	HGNC	ENSG00000110844	tier1	-	-	121	0	0.00	85	5	5.56
PRPF40B	0	genome.wustl.edu	37	12	50030498	50030498	+	Splice_Site	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	50030498	50030498	G	A	SNP	PRPF40B	ENST00000548825	human	ensembl	74_37	+1	known	splice_site	c.1427-1	e16-1	1.000	-	-	-	no_errors	PRPF40B	HGNC	ENSG00000110844	tier1	-	-	99	0	0.00	85	5	5.56
PRPF6	0	genome.wustl.edu	37	20	62660787	62660787	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	20	62660787	62660787	G	T	SNP	PRPF6	ENST00000266079	human	ensembl	74_37	+1	known	missense	c.2489	p.S830I	1.000	NULL	pfam_PRP1_N,smart_HAT,smart_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	PRPF6	HGNC	ENSG00000101161	tier1	-	-	105	0	0.00	121	11	8.33
PRPF6	0	genome.wustl.edu	37	20	62660787	62660787	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	20	62660787	62660787	G	T	SNP	PRPF6	ENST00000266079	human	ensembl	74_37	+1	known	missense	c.2489	p.S830I	1.000	NULL	pfam_PRP1_N,smart_HAT,smart_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	PRPF6	HGNC	ENSG00000101161	tier1	-	-	113	0	0.00	121	11	8.33
PRR16	0	genome.wustl.edu	37	5	120021871	120021871	+	Silent	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	120021871	120021871	A	C	SNP	PRR16	ENST00000407149	human	ensembl	74_37	+1	known	silent	c.382	p.R128	0.152	NULL	NULL	-	no_errors	PRR16	HGNC	ENSG00000184838	tier1	-	-	54	0	0.00	33	20	37.74
PRR16	0	genome.wustl.edu	37	5	120021871	120021871	+	Silent	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	120021871	120021871	A	C	SNP	PRR16	ENST00000407149	human	ensembl	74_37	+1	known	silent	c.382	p.R128	0.152	NULL	NULL	-	no_errors	PRR16	HGNC	ENSG00000184838	tier1	-	-	60	0	0.00	33	20	37.74
PRRG2	0	genome.wustl.edu	37	19	50093249	50093249	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	50093249	50093249	C	T	SNP	PRRG2	ENST00000246794	human	ensembl	74_37	+1	known	missense	c.530	p.T177I	1.000	NULL	pfam_GLA_domain,superfamily_GLA_domain,smart_GLA_domain,pfscan_GLA_domain,prints_GLA_domain	-	no_errors	PRRG2	HGNC	ENSG00000126460	tier1	-	-	20	0	0.00	16	4	20.00
PSMA3	0	genome.wustl.edu	37	14	58730477	58730477	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	58730477	58730477	G	T	SNP	PSMA3	ENST00000216455	human	ensembl	74_37	+1	known	nonsense	c.532	p.E178*	1.000	pfam_Proteasome_sua/b	pfam_Proteasome_sua/b,pfam_Proteasome_asu_N,smart_Proteasome_asu_N	-	no_errors	PSMA3	HGNC	ENSG00000100567				36	0	0.00	18	2	10.00
PSMA7	0	genome.wustl.edu	37	20	60711998	60711998	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	20	60711998	60711998	T	C	SNP	PSMA7	ENST00000370873	human	ensembl	74_37	-1	known	missense	c.662	p.N221S	1.000	NULL	pfam_Proteasome_sua/b,pfam_Proteasome_asu_N,smart_Proteasome_asu_N	-	no_errors	PSMA7	HGNC	ENSG00000101182	tier1	-	-	95	0	0.00	60	65	52.00
PSTPIP1	0	genome.wustl.edu	37	15	77310810	77310810	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	77310810	77310810	G	T	SNP	PSTPIP1	ENST00000559785	human	ensembl	74_37	+1	known	missense	c.345	p.E115D	1.000	pfam_FCH_dom,superfamily_Prismane-like,smart_FCH_dom,pfscan_FCH_dom	pfam_FCH_dom,superfamily_Prismane-like,smart_FCH_dom,pfscan_FCH_dom	-	no_errors	PSTPIP1	HGNC	ENSG00000140368	tier1	-	-	36	0	0.00	30	4	11.76
PSTPIP1	0	genome.wustl.edu	37	15	77310810	77310810	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	77310810	77310810	G	T	SNP	PSTPIP1	ENST00000559785	human	ensembl	74_37	+1	known	missense	c.345	p.E115D	1.000	pfam_FCH_dom,superfamily_Prismane-like,smart_FCH_dom,pfscan_FCH_dom	pfam_FCH_dom,superfamily_Prismane-like,smart_FCH_dom,pfscan_FCH_dom	-	no_errors	PSTPIP1	HGNC	ENSG00000140368	tier1	-	-	45	0	0.00	30	4	11.76
PTENP1	0	genome.wustl.edu	37	9	33676558	33676558	+	RNA	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	33676558	33676558	T	C	SNP	PTENP1	ENST00000532280	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	PTENP1	HGNC	ENSG00000237984	tier1	-	-	111	0	0.00	71	8	10.13
PTOV1-AS1	0	genome.wustl.edu	37	19	50342059	50342059	+	RNA	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	50342059	50342059	A	G	SNP	PTOV1-AS1	ENST00000596521	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.960	-	-	-	no_errors	PTOV1-AS1	HGNC	ENSG00000268006	tier1	-	-	38	0	0.00	45	5	10.00
PTOV1-AS1	0	genome.wustl.edu	37	19	50342059	50342059	+	RNA	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	50342059	50342059	A	G	SNP	PTOV1-AS1	ENST00000596521	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.960	-	-	-	no_errors	PTOV1-AS1	HGNC	ENSG00000268006	tier1	-	-	48	0	0.00	45	5	10.00
PTPN21	0	genome.wustl.edu	37	14	88946419	88946419	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	88946419	88946419	C	G	SNP	PTPN21	ENST00000328736	human	ensembl	74_37	-1	known	missense	c.1356	p.E452D	1.000	pirsf_Tyr_Pase_non-rcpt_typ-14/21	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_FERM_central,pfam_FERM_N,pfam_FERM_PH-like_C,superfamily_FERM_central,smart_Band_41_domain,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-14/21,pfscan_FERM_domain,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam	-	no_errors	PTPN21	HGNC	ENSG00000070778	tier1	-	-	64	0	0.00	44	8	15.38
PTPN21	0	genome.wustl.edu	37	14	88946419	88946419	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	88946419	88946419	C	G	SNP	PTPN21	ENST00000328736	human	ensembl	74_37	-1	known	missense	c.1356	p.E452D	1.000	pirsf_Tyr_Pase_non-rcpt_typ-14/21	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_FERM_central,pfam_FERM_N,pfam_FERM_PH-like_C,superfamily_FERM_central,smart_Band_41_domain,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-14/21,pfscan_FERM_domain,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam	-	no_errors	PTPN21	HGNC	ENSG00000070778	tier1	-	-	74	0	0.00	44	8	15.38
PTPN23	0	genome.wustl.edu	37	3	47452795	47452795	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	47452795	47452795	G	C	SNP	PTPN23	ENST00000265562	human	ensembl	74_37	+1	known	missense	c.3507	p.E1169D	1.000	NULL	pfam_BRO1_dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_BRO1_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN23	HGNC	ENSG00000076201	tier1	-	-	18	0	0.00	13	7	35.00
PTPN23	0	genome.wustl.edu	37	3	47452795	47452795	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	47452795	47452795	G	C	SNP	PTPN23	ENST00000265562	human	ensembl	74_37	+1	known	missense	c.3507	p.E1169D	1.000	NULL	pfam_BRO1_dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_BRO1_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN23	HGNC	ENSG00000076201	tier1	-	-	20	0	0.00	13	7	35.00
PTPRD	0	genome.wustl.edu	37	9	8492870	8492870	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	8492870	8492870	G	A	SNP	PTPRD	ENST00000356435	human	ensembl	74_37	-1	known	missense	c.2459	p.T820I	1.000	superfamily_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRD	HGNC	ENSG00000153707	tier1	-	-	71	0	0.00	31	7	18.42
PTPRD	0	genome.wustl.edu	37	9	8492870	8492870	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	8492870	8492870	G	A	SNP	PTPRD	ENST00000356435	human	ensembl	74_37	-1	known	missense	c.2459	p.T820I	1.000	superfamily_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRD	HGNC	ENSG00000153707	tier1	-	-	72	0	0.00	31	7	18.42
PTPRD	0	genome.wustl.edu	37	9	8518303	8518303	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	8518303	8518303	G	C	SNP	PTPRD	ENST00000356435	human	ensembl	74_37	-1	known	missense	c.1088	p.S363C	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRD	HGNC	ENSG00000153707	tier1	-	-	32	0	0.00	8	7	46.67
PTPRD	0	genome.wustl.edu	37	9	8518303	8518303	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	8518303	8518303	G	C	SNP	PTPRD	ENST00000356435	human	ensembl	74_37	-1	known	missense	c.1088	p.S363C	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRD	HGNC	ENSG00000153707	tier1	-	-	35	0	0.00	8	7	46.67
PTPRJ	0	genome.wustl.edu	37	11	48134407	48134407	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	48134407	48134407	G	T	SNP	PTPRJ	ENST00000418331	human	ensembl	74_37	+1	known	missense	c.224	p.G75V	0.000	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRJ	HGNC	ENSG00000149177	tier1	-	-	85	0	0.00	66	4	5.71
PTPRR	0	genome.wustl.edu	37	12	71286609	71286609	+	Silent	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	71286609	71286609	A	G	SNP	PTPRR	ENST00000283228	human	ensembl	74_37	-1	known	silent	c.207	p.S69	0.142	pirsf_Tyr_Pase_rcpt_R/non-rcpt_5	pirsf_Tyr_Pase_rcpt_R/non-rcpt_5,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_KIM-con,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRR	HGNC	ENSG00000153233	tier1	-	-	68	0	0.00	73	6	7.59
PTPRR	0	genome.wustl.edu	37	12	71286609	71286609	+	Silent	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	71286609	71286609	A	G	SNP	PTPRR	ENST00000283228	human	ensembl	74_37	-1	known	silent	c.207	p.S69	0.142	pirsf_Tyr_Pase_rcpt_R/non-rcpt_5	pirsf_Tyr_Pase_rcpt_R/non-rcpt_5,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_KIM-con,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRR	HGNC	ENSG00000153233	tier1	-	-	82	0	0.00	73	6	7.59
PTRH1	0	genome.wustl.edu	37	9	130457377	130457377	+	RNA	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	130457377	130457377	A	G	SNP	PTRH1	ENST00000335223	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.020	-	-	-	no_errors	PTRH1	HGNC	ENSG00000187024	tier1	-	-	17	0	0.00	19	7	26.92
PWP2	0	genome.wustl.edu	37	21	45539308	45539308	+	Silent	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	21	45539308	45539308	C	G	SNP	PWP2	ENST00000291576	human	ensembl	74_37	+1	known	silent	c.1092	p.S364	1.000	superfamily_Quinonprotein_ADH-like_supfam,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_SSU_processome_Utp12,superfamily_Quinonprotein_ADH-like_supfam,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	PWP2	HGNC	ENSG00000241945	tier1	-	-	95	0	0.00	46	20	30.30
RAB5A	0	genome.wustl.edu	37	3	20019889	20019889	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	20019889	20019889	G	A	SNP	RAB5A	ENST00000273047	human	ensembl	74_37	+1	known	missense	c.526	p.A176T	1.000	pfam_Small_GTPase,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB5A	HGNC	ENSG00000144566	tier1	-	-	47	0	0.00	34	17	33.33
RAB5A	0	genome.wustl.edu	37	3	20019889	20019889	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	20019889	20019889	G	A	SNP	RAB5A	ENST00000273047	human	ensembl	74_37	+1	known	missense	c.526	p.A176T	1.000	pfam_Small_GTPase,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB5A	HGNC	ENSG00000144566	tier1	-	-	84	0	0.00	34	17	33.33
RAD17	0	genome.wustl.edu	37	5	68677884	68677884	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	68677884	68677884	G	A	SNP	RAD17	ENST00000380774	human	ensembl	74_37	+1	known	missense	c.541	p.E181K	1.000	superfamily_P-loop_NTPase,tigrfam_Checkpoint_prot_Rad24_fun/met	superfamily_P-loop_NTPase,tigrfam_Checkpoint_prot_Rad24_fun/met	-	no_errors	RAD17	HGNC	ENSG00000152942				76	0	0.00	71	4	5.33
RAD54L2	0	genome.wustl.edu	37	3	51624572	51624572	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	51624572	51624572	G	A	SNP	RAD54L2	ENST00000409535	human	ensembl	74_37	+1	known	missense	c.136	p.D46N	1.000	NULL	pfam_SNF2_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	RAD54L2	HGNC	ENSG00000164080	tier1	-	-	103	0	0.00	54	5	8.47
RAD54L2	0	genome.wustl.edu	37	3	51624572	51624572	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	51624572	51624572	G	A	SNP	RAD54L2	ENST00000409535	human	ensembl	74_37	+1	known	missense	c.136	p.D46N	1.000	NULL	pfam_SNF2_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	RAD54L2	HGNC	ENSG00000164080	tier1	-	-	90	0	0.00	54	5	8.47
RAD54L2	0	genome.wustl.edu	37	3	51624573	51624573	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	51624573	51624573	A	T	SNP	RAD54L2	ENST00000409535	human	ensembl	74_37	+1	known	missense	c.137	p.D46V	1.000	NULL	pfam_SNF2_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	RAD54L2	HGNC	ENSG00000164080	tier1	-	-	101	0	0.00	54	5	8.47
RAD54L2	0	genome.wustl.edu	37	3	51624573	51624573	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	51624573	51624573	A	T	SNP	RAD54L2	ENST00000409535	human	ensembl	74_37	+1	known	missense	c.137	p.D46V	1.000	NULL	pfam_SNF2_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	RAD54L2	HGNC	ENSG00000164080	tier1	-	-	91	0	0.00	54	5	8.47
RANBP10	0	genome.wustl.edu	37	16	67763629	67763629	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	67763629	67763629	G	C	SNP	RANBP10	ENST00000317506	human	ensembl	74_37	-1	known	missense	c.1101	p.S367R	1.000	NULL	pfam_SPRY_rcpt,pfam_CTLH/CRA,pfam_LisH_dimerisation_subgr,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,smart_CTLH_C,smart_CRA_dom,pfscan_B30.2/SPRY,pfscan_LisH_dimerisation,pfscan_CTLH_C	-	no_errors	RANBP10	HGNC	ENSG00000141084	tier1	-	-	84	0	0.00	53	4	7.02
RANBP10	0	genome.wustl.edu	37	16	67763629	67763629	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	67763629	67763629	G	C	SNP	RANBP10	ENST00000317506	human	ensembl	74_37	-1	known	missense	c.1101	p.S367R	1.000	NULL	pfam_SPRY_rcpt,pfam_CTLH/CRA,pfam_LisH_dimerisation_subgr,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,smart_CTLH_C,smart_CRA_dom,pfscan_B30.2/SPRY,pfscan_LisH_dimerisation,pfscan_CTLH_C	-	no_errors	RANBP10	HGNC	ENSG00000141084	tier1	-	-	87	0	0.00	53	4	7.02
RASA1	0	genome.wustl.edu	37	5	86627277	86627277	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	86627277	86627277	C	T	SNP	RASA1	ENST00000274376	human	ensembl	74_37	+1	known	missense	c.652	p.L218F	1.000	pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2	pfam_SH2,pfam_RasGAP,pfam_Pleckstrin_homology,pfam_SH3_domain,pfam_C2_dom,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_SH2,smart_SH3_domain,smart_Pleckstrin_homology,smart_C2_dom,smart_RasGAP,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_RasGAP,prints_SH2	-	no_errors	RASA1	HGNC	ENSG00000145715				18	0	0.00	18	2	10.00
RASA4	0	genome.wustl.edu	37	7	102246379	102246379	+	Silent	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	102246379	102246379	G	A	SNP	RASA4	ENST00000262940	human	ensembl	74_37	-1	known	silent	c.354	p.G118	0.667	superfamily_C2_dom	pfam_RasGAP,pfam_C2_dom,pfam_Znf_Btk_motif,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_C2_dom,smart_RasGAP,smart_Pleckstrin_homology,smart_Znf_Btk_motif,prints_C2_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_Znf_Btk_motif,pfscan_RasGAP	-	no_errors	RASA4	HGNC	ENSG00000105808	tier1	-	-	223	0	0.00	217	41	15.83
RASA4	0	genome.wustl.edu	37	7	102246379	102246379	+	Silent	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	102246379	102246379	G	A	SNP	RASA4	ENST00000262940	human	ensembl	74_37	-1	known	silent	c.354	p.G118	0.667	superfamily_C2_dom	pfam_RasGAP,pfam_C2_dom,pfam_Znf_Btk_motif,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_C2_dom,smart_RasGAP,smart_Pleckstrin_homology,smart_Znf_Btk_motif,prints_C2_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_Znf_Btk_motif,pfscan_RasGAP	-	no_errors	RASA4	HGNC	ENSG00000105808	tier1	-	-	248	0	0.00	217	41	15.83
RASA4B	0	genome.wustl.edu	37	7	102147216	102147216	+	Silent	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	102147216	102147216	G	A	SNP	RASA4B	ENST00000465829	human	ensembl	74_37	-1	known	silent	c.354	p.G118	0.757	superfamily_C2_dom	pfam_RasGAP,pfam_C2_dom,pfam_Znf_Btk_motif,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_C2_dom,smart_RasGAP,smart_Pleckstrin_homology,smart_Znf_Btk_motif,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_Znf_Btk_motif,pfscan_RasGAP,prints_C2_dom	-	no_errors	RASA4B	HGNC	ENSG00000170667	tier1	-	-	84	0	0.00	164	56	25.45
RASGRF1	0	genome.wustl.edu	37	15	79350703	79350703	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	79350703	79350703	C	G	SNP	RASGRF1	ENST00000419573	human	ensembl	74_37	-1	known	missense	c.504	p.E168D	1.000	NULL	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_Ras_GEF_dom,superfamily_DH-domain,smart_Pleckstrin_homology,smart_DH-domain,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_DH-domain,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RASGRF1	HGNC	ENSG00000058335	tier1	-	-	57	0	0.00	14	3	17.65
RB1CC1	0	genome.wustl.edu	37	8	53570013	53570013	+	Silent	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	53570013	53570013	A	C	SNP	RB1CC1	ENST00000025008	human	ensembl	74_37	-1	known	silent	c.2376	p.T792	0.000	NULL	pfam_Autophagy-rel_p11	-	no_errors	RB1CC1	HGNC	ENSG00000023287	tier1	-	-	29	0	0.00	29	22	43.14
RB1CC1	0	genome.wustl.edu	37	8	53570013	53570013	+	Silent	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	53570013	53570013	A	C	SNP	RB1CC1	ENST00000025008	human	ensembl	74_37	-1	known	silent	c.2376	p.T792	0.000	NULL	pfam_Autophagy-rel_p11	-	no_errors	RB1CC1	HGNC	ENSG00000023287	tier1	-	-	53	0	0.00	29	22	43.14
RBMXL2	0	genome.wustl.edu	37	11	7110519	7110519	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	7110519	7110519	T	C	SNP	RBMXL2	ENST00000306904	human	ensembl	74_37	+1	known	silent	c.168	p.F56	1.000	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,pfam_RBM1CTR,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBMXL2	HGNC	ENSG00000170748	tier1	-	-	114	0	0.00	79	5	5.95
RBMXL2	0	genome.wustl.edu	37	11	7110519	7110519	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	7110519	7110519	T	C	SNP	RBMXL2	ENST00000306904	human	ensembl	74_37	+1	known	silent	c.168	p.F56	1.000	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,pfam_RBM1CTR,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBMXL2	HGNC	ENSG00000170748	tier1	-	-	120	0	0.00	79	5	5.95
RBMY2EP	0	genome.wustl.edu	37	Y	23557170	23557170	+	RNA	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	Y	23557170	23557170	A	T	SNP	RBMY2EP	ENST00000444169	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RBMY2EP	HGNC	ENSG00000223637	tier1	-	-	146	0	0.00	51	56	51.85
RBMY2EP	0	genome.wustl.edu	37	Y	23557170	23557170	+	RNA	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	Y	23557170	23557170	A	T	SNP	RBMY2EP	ENST00000444169	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RBMY2EP	HGNC	ENSG00000223637	tier1	-	-	164	0	0.00	51	56	51.85
RC3H2	0	genome.wustl.edu	37	9	125659575	125659575	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	125659575	125659575	G	T	SNP	RC3H2	ENST00000357244	human	ensembl	74_37	-1	known	missense	c.214	p.Q72K	1.000	NULL	pfam_Znf_CCCH,smart_Znf_RING,smart_Znf_CCCH,pfscan_Znf_RING	-	no_errors	RC3H2	HGNC	ENSG00000056586				72	0	0.00	65	4	5.71
RDH10	0	genome.wustl.edu	37	8	74209587	74209587	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	74209587	74209587	T	C	SNP	RDH10	ENST00000240285	human	ensembl	74_37	+1	known	missense	c.448	p.S150P	1.000	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR	-	no_errors	RDH10	HGNC	ENSG00000121039	tier1	-	-	99	0	0.00	67	7	9.46
REL	0	genome.wustl.edu	37	2	61149328	61149328	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	61149328	61149328	G	T	SNP	REL	ENST00000295025	human	ensembl	74_37	+1	known	missense	c.1518	p.M506I	0.932	NULL	pfam_RHD,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NF_Rel_Dor	-	no_errors	REL	HGNC	ENSG00000162924	tier1	-	-	36	0	0.00	21	3	12.50
REL	0	genome.wustl.edu	37	2	61149328	61149328	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	61149328	61149328	G	T	SNP	REL	ENST00000295025	human	ensembl	74_37	+1	known	missense	c.1518	p.M506I	0.932	NULL	pfam_RHD,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NF_Rel_Dor	-	no_errors	REL	HGNC	ENSG00000162924	tier1	-	-	49	0	0.00	21	3	12.50
REL	0	genome.wustl.edu	37	2	61149587	61149587	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	61149587	61149587	C	T	SNP	REL	ENST00000295025	human	ensembl	74_37	+1	known	nonsense	c.1777	p.Q593*	0.400	NULL	pfam_RHD,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NF_Rel_Dor	-	no_errors	REL	HGNC	ENSG00000162924				69	0	0.00	40	4	9.09
RELB	0	genome.wustl.edu	37	19	45532204	45532204	+	Nonsense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	45532204	45532204	C	A	SNP	RELB	ENST00000221452	human	ensembl	74_37	+1	known	nonsense	c.945	p.C315*	0.913	superfamily_Ig_E-set,smart_IPT	pfam_RHD,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NF_Rel_Dor	-	no_errors	RELB	HGNC	ENSG00000104856	tier1	-	-	101	0	0.00	77	29	26.85
RELB	0	genome.wustl.edu	37	19	45532204	45532204	+	Nonsense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	45532204	45532204	C	A	SNP	RELB	ENST00000221452	human	ensembl	74_37	+1	known	nonsense	c.945	p.C315*	0.913	superfamily_Ig_E-set,smart_IPT	pfam_RHD,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NF_Rel_Dor	-	no_errors	RELB	HGNC	ENSG00000104856	tier1	-	-	87	0	0.00	77	29	26.85
RFC5	0	genome.wustl.edu	37	12	118462695	118462695	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	118462695	118462695	T	C	SNP	RFC5	ENST00000454402	human	ensembl	74_37	+1	known	missense	c.461	p.I154T	1.000	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Rep_factorC_C_dom,pfam_ATPase_AAA_core,pfam_DNA_helicase_Holl-junc_RuvB_N,pfam_DUF815,superfamily_P-loop_NTPase,superfamily_DNA_pol3_clamp-load_cplx_C,smart_AAA+_ATPase	-	no_errors	RFC5	HGNC	ENSG00000111445	tier1	-	-	51	0	0.00	55	8	12.70
RFC5	0	genome.wustl.edu	37	12	118462695	118462695	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	118462695	118462695	T	C	SNP	RFC5	ENST00000454402	human	ensembl	74_37	+1	known	missense	c.461	p.I154T	1.000	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Rep_factorC_C_dom,pfam_ATPase_AAA_core,pfam_DNA_helicase_Holl-junc_RuvB_N,pfam_DUF815,superfamily_P-loop_NTPase,superfamily_DNA_pol3_clamp-load_cplx_C,smart_AAA+_ATPase	-	no_errors	RFC5	HGNC	ENSG00000111445	tier1	-	-	58	0	0.00	55	8	12.70
RFWD3	0	genome.wustl.edu	37	16	74670448	74670448	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	74670448	74670448	T	C	SNP	RFWD3	ENST00000361070	human	ensembl	74_37	-1	known	missense	c.1222	p.S408G	0.000	NULL	pfam_WD40_repeat,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_WD40_repeat,pfscan_Znf_RING	-	no_errors	RFWD3	HGNC	ENSG00000168411	tier1	-	-	51	0	0.00	38	12	24.00
RFWD3	0	genome.wustl.edu	37	16	74670448	74670448	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	74670448	74670448	T	C	SNP	RFWD3	ENST00000361070	human	ensembl	74_37	-1	known	missense	c.1222	p.S408G	0.000	NULL	pfam_WD40_repeat,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_WD40_repeat,pfscan_Znf_RING	-	no_errors	RFWD3	HGNC	ENSG00000168411	tier1	-	-	60	0	0.00	38	12	24.00
RGAG1	0	genome.wustl.edu	37	X	109697820	109697820	+	Silent	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	109697820	109697820	G	T	SNP	RGAG1	ENST00000465301	human	ensembl	74_37	+1	known	silent	c.3975	p.L1325	0.027	NULL	NULL	-	no_errors	RGAG1	HGNC	ENSG00000243978	tier1	-	-	25	0	0.00	7	24	77.42
RGAG1	0	genome.wustl.edu	37	X	109697820	109697820	+	Silent	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	109697820	109697820	G	T	SNP	RGAG1	ENST00000465301	human	ensembl	74_37	+1	known	silent	c.3975	p.L1325	0.027	NULL	NULL	-	no_errors	RGAG1	HGNC	ENSG00000243978	tier1	-	-	39	0	0.00	7	24	77.42
RGL4	0	genome.wustl.edu	37	22	24036564	24036564	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	22	24036564	24036564	G	T	SNP	RGL4	ENST00000290691	human	ensembl	74_37	+1	known	missense	c.943	p.V315L	0.005	pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	-	no_errors	RGL4	HGNC	ENSG00000159496	tier1	-	-	51	0	0.00	36	8	18.18
RGL4	0	genome.wustl.edu	37	22	24036564	24036564	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	22	24036564	24036564	G	T	SNP	RGL4	ENST00000290691	human	ensembl	74_37	+1	known	missense	c.943	p.V315L	0.005	pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	-	no_errors	RGL4	HGNC	ENSG00000159496	tier1	-	-	54	0	0.00	36	8	18.18
RGP1	0	genome.wustl.edu	37	9	35752730	35752730	+	Silent	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	35752730	35752730	C	A	SNP	RGP1	ENST00000456972	human	ensembl	74_37	+1	known	silent	c.1155	p.P385	0.045	NULL	pfam_Rgp1	-	no_errors	RGP1	HGNC	ENSG00000107185	tier1	-	-	118	0	0.00	63	4	5.97
RGP1	0	genome.wustl.edu	37	9	35752730	35752730	+	Silent	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	35752730	35752730	C	A	SNP	RGP1	ENST00000456972	human	ensembl	74_37	+1	known	silent	c.1155	p.P385	0.045	NULL	pfam_Rgp1	-	no_errors	RGP1	HGNC	ENSG00000107185	tier1	-	-	131	0	0.00	63	4	5.97
RGS3	0	genome.wustl.edu	37	9	116269826	116269826	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	116269826	116269826	G	T	SNP	RGS3	ENST00000350696	human	ensembl	74_37	+1	known	missense	c.1345	p.G449W	0.142	NULL	pfam_RGS_dom,pfam_C2_dom,pfam_PDZ,superfamily_Regulat_G_prot_signal_superfam,superfamily_C2_dom,superfamily_PDZ,smart_C2_dom,smart_PDZ,smart_Regulat_G_prot_signal_superfam,pfscan_C2_dom,pfscan_PDZ,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS3	HGNC	ENSG00000138835				64	0	0.00	35	2	5.41
RHD	0	genome.wustl.edu	37	1	25628086	25628086	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	25628086	25628086	C	T	SNP	RHD	ENST00000328664	human	ensembl	74_37	+1	known	missense	c.710	p.A237V	0.472	pfam_NH4_transpt_AmtB-like_dom,superfamily_NH4_transpt_AmtB-like_dom,prints_RhesusRHD	pfam_NH4_transpt_AmtB-like_dom,superfamily_NH4_transpt_AmtB-like_dom,prints_RhesusRHD	-	no_errors	RHD	HGNC	ENSG00000187010				95	0	0.00	57	3	5.00
RMI1	0	genome.wustl.edu	37	9	86617740	86617740	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	86617740	86617740	G	A	SNP	RMI1	ENST00000325875	human	ensembl	74_37	+1	known	missense	c.1839	p.M613I	0.183	NULL	pfam_DUF1767	-	no_errors	RMI1	HGNC	ENSG00000178966	tier1	-	-	131	0	0.00	114	10	8.00
RMI1	0	genome.wustl.edu	37	9	86617740	86617740	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	86617740	86617740	G	A	SNP	RMI1	ENST00000325875	human	ensembl	74_37	+1	known	missense	c.1839	p.M613I	0.183	NULL	pfam_DUF1767	-	no_errors	RMI1	HGNC	ENSG00000178966	tier1	-	-	96	0	0.00	114	10	8.00
RMI1	0	genome.wustl.edu	37	9	86617741	86617741	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	86617741	86617741	G	T	SNP	RMI1	ENST00000325875	human	ensembl	74_37	+1	known	nonsense	c.1840	p.E614*	0.934	NULL	pfam_DUF1767	-	no_errors	RMI1	HGNC	ENSG00000178966	tier1	-	-	131	0	0.00	116	10	7.94
RMI1	0	genome.wustl.edu	37	9	86617741	86617741	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	86617741	86617741	G	T	SNP	RMI1	ENST00000325875	human	ensembl	74_37	+1	known	nonsense	c.1840	p.E614*	0.934	NULL	pfam_DUF1767	-	no_errors	RMI1	HGNC	ENSG00000178966	tier1	-	-	98	0	0.00	116	10	7.94
RNF169	0	genome.wustl.edu	37	11	74546847	74546847	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	74546847	74546847	G	A	SNP	RNF169	ENST00000299563	human	ensembl	74_37	+1	known	missense	c.1199	p.R400H	0.997	NULL	smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF169	HGNC	ENSG00000166439				76	0	0.00	35	5	12.50
RNF17	0	genome.wustl.edu	37	13	25419157	25419157	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	13	25419157	25419157	T	G	SNP	RNF17	ENST00000255324	human	ensembl	74_37	+1	known	missense	c.3041	p.L1014R	0.999	pfam_Tudor,smart_Tudor,pfscan_Tudor	pfam_Tudor,smart_Tudor,pfscan_Tudor,pfscan_Znf_RING	-	no_errors	RNF17	HGNC	ENSG00000132972	tier1	-	-	60	0	0.00	63	17	21.25
RNF17	0	genome.wustl.edu	37	13	25419157	25419157	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	13	25419157	25419157	T	G	SNP	RNF17	ENST00000255324	human	ensembl	74_37	+1	known	missense	c.3041	p.L1014R	0.999	pfam_Tudor,smart_Tudor,pfscan_Tudor	pfam_Tudor,smart_Tudor,pfscan_Tudor,pfscan_Znf_RING	-	no_errors	RNF17	HGNC	ENSG00000132972	tier1	-	-	96	0	0.00	63	17	21.25
RNF20	0	genome.wustl.edu	37	9	104314938	104314938	+	Nonsense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	104314938	104314938	A	T	SNP	RNF20	ENST00000389120	human	ensembl	74_37	+1	known	nonsense	c.1804	p.K602*	1.000	NULL	superfamily_STAT_TF_coiled-coil,superfamily_Prefoldin,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF20	HGNC	ENSG00000155827	tier1	-	-	44	0	0.00	51	13	20.31
RNF20	0	genome.wustl.edu	37	9	104314938	104314938	+	Nonsense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	104314938	104314938	A	T	SNP	RNF20	ENST00000389120	human	ensembl	74_37	+1	known	nonsense	c.1804	p.K602*	1.000	NULL	superfamily_STAT_TF_coiled-coil,superfamily_Prefoldin,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF20	HGNC	ENSG00000155827	tier1	-	-	91	0	0.00	51	13	20.31
RNF4	0	genome.wustl.edu	37	4	2498812	2498812	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	2498812	2498812	T	G	SNP	RNF4	ENST00000314289	human	ensembl	74_37	+1	known	missense	c.88	p.S30A	0.984	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF4	HGNC	ENSG00000063978	tier1	-	-	107	0	0.00	68	4	5.56
RNF4	0	genome.wustl.edu	37	4	2498812	2498812	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	2498812	2498812	T	G	SNP	RNF4	ENST00000314289	human	ensembl	74_37	+1	known	missense	c.88	p.S30A	0.984	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF4	HGNC	ENSG00000063978	tier1	-	-	89	0	0.00	68	4	5.56
ROBO4	0	genome.wustl.edu	37	11	124761567	124761567	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	124761567	124761567	C	T	SNP	ROBO4	ENST00000306534	human	ensembl	74_37	-1	known	missense	c.1679	p.R560H	0.077	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	ROBO4	HGNC	ENSG00000154133	tier1	-	-	66	0	0.00	59	6	9.23
RPL13A	0	genome.wustl.edu	37	19	49994080	49994080	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	49994080	49994080	C	T	SNP	RPL13A	ENST00000391857	human	ensembl	74_37	+1	known	missense	c.301	p.R101C	0.989	pfam_Ribosomal_L13,superfamily_Ribosomal_L13_dom,tigrfam_Ribosomal_L13_euk/arc	pfam_Ribosomal_L13,superfamily_Ribosomal_L13_dom,tigrfam_Ribosomal_L13_euk/arc	-	no_errors	RPL13A	HGNC	ENSG00000142541	tier1	-	-	60	0	0.00	36	15	29.41
RPL13A	0	genome.wustl.edu	37	19	49994080	49994080	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	49994080	49994080	C	T	SNP	RPL13A	ENST00000391857	human	ensembl	74_37	+1	known	missense	c.301	p.R101C	0.989	pfam_Ribosomal_L13,superfamily_Ribosomal_L13_dom,tigrfam_Ribosomal_L13_euk/arc	pfam_Ribosomal_L13,superfamily_Ribosomal_L13_dom,tigrfam_Ribosomal_L13_euk/arc	-	no_errors	RPL13A	HGNC	ENSG00000142541	tier1	-	-	66	0	0.00	36	15	29.41
RPS14	0	genome.wustl.edu	37	5	149827198	149827198	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	149827198	149827198	G	C	SNP	RPS14	ENST00000312037	human	ensembl	74_37	-1	known	missense	c.99	p.I33M	1.000	pfam_Ribosomal_S11,pirsf_Ribosomal_S11	pfam_Ribosomal_S11,pirsf_Ribosomal_S11	-	no_errors	RPS14	HGNC	ENSG00000164587	tier1	-	-	105	0	0.00	41	4	8.89
RPS14	0	genome.wustl.edu	37	5	149827198	149827198	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	149827198	149827198	G	C	SNP	RPS14	ENST00000312037	human	ensembl	74_37	-1	known	missense	c.99	p.I33M	1.000	pfam_Ribosomal_S11,pirsf_Ribosomal_S11	pfam_Ribosomal_S11,pirsf_Ribosomal_S11	-	no_errors	RPS14	HGNC	ENSG00000164587	tier1	-	-	60	0	0.00	41	4	8.89
RRH	0	genome.wustl.edu	37	4	110756540	110756541	+	Frame_Shift_Ins	INS	-	-	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	110756540	110756541	-	T	INS	RRH	ENST00000317735	human	ensembl	74_37	+1	known	frame_shift_ins	c.316_317	p.G109fs	1.000:1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Peropsin,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Peropsin,prints_GPCR_Rhodpsn	-	no_errors	RRH	HGNC	ENSG00000180245	tier1			59	0	0.00	34	2	5.56
RRH	0	genome.wustl.edu	37	4	110756540	110756541	+	Frame_Shift_Ins	INS	-	-	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	110756540	110756541	-	T	INS	RRH	ENST00000317735	human	ensembl	74_37	+1	known	frame_shift_ins	c.316_317	p.G109fs	1.000:1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Peropsin,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Peropsin,prints_GPCR_Rhodpsn	-	no_errors	RRH	HGNC	ENSG00000180245	tier1			67	0	0.00	34	2	5.56
RSBN1	0	genome.wustl.edu	37	1	114308744	114308744	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	114308744	114308744	G	T	SNP	RSBN1	ENST00000261441	human	ensembl	74_37	-1	known	missense	c.2267	p.A756D	1.000	NULL	NULL	-	no_errors	RSBN1	HGNC	ENSG00000081019	tier1	-	-	67	0	0.00	70	4	5.41
RSBN1	0	genome.wustl.edu	37	1	114308744	114308744	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	114308744	114308744	G	T	SNP	RSBN1	ENST00000261441	human	ensembl	74_37	-1	known	missense	c.2267	p.A756D	1.000	NULL	NULL	-	no_errors	RSBN1	HGNC	ENSG00000081019	tier1	-	-	82	0	0.00	70	4	5.41
RSPO2	0	genome.wustl.edu	37	8	109094778	109094778	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	109094778	109094778	T	C	SNP	RSPO2	ENST00000276659	human	ensembl	74_37	-1	known	missense	c.89	p.K30R	1.000	superfamily_Growth_fac_rcpt_N_dom	superfamily_Growth_fac_rcpt_N_dom,superfamily_Thrombospondin_1_rpt,smart_Furin_repeat,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	RSPO2	HGNC	ENSG00000147655	tier1	-	-	66	0	0.00	49	5	9.26
RSPO2	0	genome.wustl.edu	37	8	109094778	109094778	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	109094778	109094778	T	C	SNP	RSPO2	ENST00000276659	human	ensembl	74_37	-1	known	missense	c.89	p.K30R	1.000	superfamily_Growth_fac_rcpt_N_dom	superfamily_Growth_fac_rcpt_N_dom,superfamily_Thrombospondin_1_rpt,smart_Furin_repeat,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	RSPO2	HGNC	ENSG00000147655	tier1	-	-	78	0	0.00	49	5	9.26
RTF1	0	genome.wustl.edu	37	15	41771390	41771390	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	41771390	41771390	G	C	SNP	RTF1	ENST00000389629	human	ensembl	74_37	+1	known	missense	c.1908	p.M636I	1.000	NULL	pfam_Plus-3,smart_Plus3-dom_subgr	-	no_errors	RTF1	HGNC	ENSG00000137815	tier1	-	-	43	0	0.00	32	4	11.11
RTF1	0	genome.wustl.edu	37	15	41771390	41771390	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	41771390	41771390	G	C	SNP	RTF1	ENST00000389629	human	ensembl	74_37	+1	known	missense	c.1908	p.M636I	1.000	NULL	pfam_Plus-3,smart_Plus3-dom_subgr	-	no_errors	RTF1	HGNC	ENSG00000137815	tier1	-	-	63	0	0.00	32	4	11.11
RUNDC3B	0	genome.wustl.edu	37	7	87280172	87280172	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	87280172	87280172	T	C	SNP	RUNDC3B	ENST00000338056	human	ensembl	74_37	+1	known	missense	c.157	p.F53L	1.000	NULL	pfam_Run,smart_Run,pfscan_Run	-	no_errors	RUNDC3B	HGNC	ENSG00000105784	tier1	-	-	28	0	0.00	63	19	23.17
RUNDC3B	0	genome.wustl.edu	37	7	87280172	87280172	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	87280172	87280172	T	C	SNP	RUNDC3B	ENST00000338056	human	ensembl	74_37	+1	known	missense	c.157	p.F53L	1.000	NULL	pfam_Run,smart_Run,pfscan_Run	-	no_errors	RUNDC3B	HGNC	ENSG00000105784	tier1	-	-	63	0	0.00	63	19	23.17
RYR2	0	genome.wustl.edu	37	1	237794767	237794767	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	237794767	237794767	C	A	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	missense	c.6475	p.L2159I	1.000	pfam_Ca-rel_channel	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626	tier1	-	-	102	0	0.00	57	26	31.33
RYR2	0	genome.wustl.edu	37	1	237794767	237794767	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	237794767	237794767	C	A	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	missense	c.6475	p.L2159I	1.000	pfam_Ca-rel_channel	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626	tier1	-	-	90	0	0.00	57	26	31.33
RYR3	0	genome.wustl.edu	37	15	34110884	34110884	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	34110884	34110884	A	G	SNP	RYR3	ENST00000389232	human	ensembl	74_37	+1	known	missense	c.10705	p.S3569G	1.000	superfamily_ARM-type_fold	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838	tier1	-	-	37	0	0.00	28	4	12.12
RYR3	0	genome.wustl.edu	37	15	34110884	34110884	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	34110884	34110884	A	G	SNP	RYR3	ENST00000389232	human	ensembl	74_37	+1	known	missense	c.10705	p.S3569G	1.000	superfamily_ARM-type_fold	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838	tier1	-	-	53	0	0.00	28	4	12.12
SAG	0	genome.wustl.edu	37	2	234235800	234235800	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	234235800	234235800	G	A	SNP	SAG	ENST00000409110	human	ensembl	74_37	+1	known	missense	c.469	p.A157T	0.258	pfam_Arrestin-like_N,superfamily_Ig_E-set	pfam_Arrestin-like_N,pfam_Arrestin_C-like,superfamily_Ig_E-set,prints_Arrestin	-	no_errors	SAG	HGNC	ENSG00000130561	tier1	rs201283305	-	52	0	0.00	29	4	12.12
SAG	0	genome.wustl.edu	37	2	234235800	234235800	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	234235800	234235800	G	A	SNP	SAG	ENST00000409110	human	ensembl	74_37	+1	known	missense	c.469	p.A157T	0.258	pfam_Arrestin-like_N,superfamily_Ig_E-set	pfam_Arrestin-like_N,pfam_Arrestin_C-like,superfamily_Ig_E-set,prints_Arrestin	-	no_errors	SAG	HGNC	ENSG00000130561	tier1	rs201283305	-	66	0	0.00	29	4	12.12
SAMM50	0	genome.wustl.edu	37	22	44364657	44364657	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	22	44364657	44364657	G	A	SNP	SAMM50	ENST00000350028	human	ensembl	74_37	+1	known	missense	c.281	p.G94E	0.997	NULL	pfam_Bac_surfAg_D15	-	no_errors	SAMM50	HGNC	ENSG00000100347	tier1	-	-	37	0	0.00	30	13	30.23
SAMM50	0	genome.wustl.edu	37	22	44364657	44364657	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	22	44364657	44364657	G	A	SNP	SAMM50	ENST00000350028	human	ensembl	74_37	+1	known	missense	c.281	p.G94E	0.997	NULL	pfam_Bac_surfAg_D15	-	no_errors	SAMM50	HGNC	ENSG00000100347	tier1	-	-	55	0	0.00	30	13	30.23
SCAND3	0	genome.wustl.edu	37	6	28540334	28540334	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	28540334	28540334	A	C	SNP	SCAND3	ENST00000452236	human	ensembl	74_37	-1	known	missense	c.3332	p.I1111S	1.000	superfamily_RNaseH-like_dom	pfam_Tscrpt_reg_SCAN,pfam_Integrase_cat-core,pfam_HATC_dom_C,superfamily_Retrov_capsid_C,superfamily_RNaseH-like_dom,smart_Tscrpt_reg_SCAN,pfscan_Integrase_cat-core,pfscan_Tscrpt_reg_SCAN	-	no_errors	SCAND3	HGNC	ENSG00000232040	tier1	-	-	38	0	0.00	42	4	8.70
SCAND3	0	genome.wustl.edu	37	6	28540334	28540334	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	28540334	28540334	A	C	SNP	SCAND3	ENST00000452236	human	ensembl	74_37	-1	known	missense	c.3332	p.I1111S	1.000	superfamily_RNaseH-like_dom	pfam_Tscrpt_reg_SCAN,pfam_Integrase_cat-core,pfam_HATC_dom_C,superfamily_Retrov_capsid_C,superfamily_RNaseH-like_dom,smart_Tscrpt_reg_SCAN,pfscan_Integrase_cat-core,pfscan_Tscrpt_reg_SCAN	-	no_errors	SCAND3	HGNC	ENSG00000232040	tier1	-	-	72	0	0.00	42	4	8.70
SCN11A	0	genome.wustl.edu	37	3	38913761	38913761	+	Silent	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	38913761	38913761	A	G	SNP	SCN11A	ENST00000302328	human	ensembl	74_37	-1	known	silent	c.3418	p.L1140	0.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu	-	no_errors	SCN11A	HGNC	ENSG00000168356	tier1	-	-	61	0	0.00	34	8	19.05
SCN11A	0	genome.wustl.edu	37	3	38913761	38913761	+	Silent	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	38913761	38913761	A	G	SNP	SCN11A	ENST00000302328	human	ensembl	74_37	-1	known	silent	c.3418	p.L1140	0.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu	-	no_errors	SCN11A	HGNC	ENSG00000168356	tier1	-	-	76	0	0.00	34	8	19.05
SCN5A	0	genome.wustl.edu	37	3	38591997	38591997	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	38591997	38591997	A	C	SNP	SCN5A	ENST00000333535	human	ensembl	74_37	-1	known	missense	c.5866	p.F1956V	1.000	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,prints_Na_channel_a5su,prints_Na_channel_asu	-	no_errors	SCN5A	HGNC	ENSG00000183873	tier1	-	-	31	0	0.00	10	8	44.44
SCN5A	0	genome.wustl.edu	37	3	38591997	38591997	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	38591997	38591997	A	C	SNP	SCN5A	ENST00000333535	human	ensembl	74_37	-1	known	missense	c.5866	p.F1956V	1.000	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,prints_Na_channel_a5su,prints_Na_channel_asu	-	no_errors	SCN5A	HGNC	ENSG00000183873	tier1	-	-	40	0	0.00	10	8	44.44
SENP7	0	genome.wustl.edu	37	3	101090887	101090887	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	101090887	101090887	C	T	SNP	SENP7	ENST00000394095	human	ensembl	74_37	-1	known	missense	c.761	p.G254D	0.000	NULL	pfam_Peptidase_C48,pfscan_Peptidase_C48	-	no_errors	SENP7	HGNC	ENSG00000138468	tier1	-	-	129	0	0.00	68	13	16.05
SENP7	0	genome.wustl.edu	37	3	101090887	101090887	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	101090887	101090887	C	T	SNP	SENP7	ENST00000394095	human	ensembl	74_37	-1	known	missense	c.761	p.G254D	0.000	NULL	pfam_Peptidase_C48,pfscan_Peptidase_C48	-	no_errors	SENP7	HGNC	ENSG00000138468	tier1	-	-	68	0	0.00	68	13	16.05
SEPT3	0	genome.wustl.edu	37	22	42377841	42377841	+	Splice_Site	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	22	42377841	42377841	G	T	SNP	SEPT3	ENST00000396426	human	ensembl	74_37	+1	known	splice_site	c.202+1	e2+1	1.000	-	-	-	no_errors	SEPT3	HGNC	ENSG00000100167				51	0	0.00	36	2	5.26
SET	0	genome.wustl.edu	37	9	131455203	131455203	+	Silent	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	131455203	131455203	G	C	SNP	SET	ENST00000372692	human	ensembl	74_37	+1	known	silent	c.474	p.L158	1.000	pfam_NAP_family	pfam_NAP_family	-	no_errors	SET	HGNC	ENSG00000119335	tier1	-	-	44	0	0.00	49	9	15.52
SET	0	genome.wustl.edu	37	9	131455203	131455203	+	Silent	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	131455203	131455203	G	C	SNP	SET	ENST00000372692	human	ensembl	74_37	+1	known	silent	c.474	p.L158	1.000	pfam_NAP_family	pfam_NAP_family	-	no_errors	SET	HGNC	ENSG00000119335	tier1	-	-	68	0	0.00	49	9	15.52
SETX	0	genome.wustl.edu	37	9	135204547	135204547	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	135204547	135204547	T	C	SNP	SETX	ENST00000372169	human	ensembl	74_37	-1	known	missense	c.2438	p.E813G	0.569	NULL	superfamily_P-loop_NTPase	-	no_errors	SETX	HGNC	ENSG00000107290	tier1	-	-	21	0	0.00	13	16	55.17
SETX	0	genome.wustl.edu	37	9	135204547	135204547	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	135204547	135204547	T	C	SNP	SETX	ENST00000372169	human	ensembl	74_37	-1	known	missense	c.2438	p.E813G	0.569	NULL	superfamily_P-loop_NTPase	-	no_errors	SETX	HGNC	ENSG00000107290	tier1	-	-	9	0	0.00	13	16	55.17
SGIP1	0	genome.wustl.edu	37	1	67185003	67185003	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	67185003	67185003	A	G	SNP	SGIP1	ENST00000237247	human	ensembl	74_37	+1	known	missense	c.1750	p.T584A	1.000	pfam_Muniscin_C-term_mu_dom	pfam_Muniscin_C-term_mu_dom,pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C	-	no_errors	SGIP1	HGNC	ENSG00000118473	tier1	-	-	56	0	0.00	35	12	25.53
SGIP1	0	genome.wustl.edu	37	1	67185003	67185003	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	67185003	67185003	A	G	SNP	SGIP1	ENST00000237247	human	ensembl	74_37	+1	known	missense	c.1750	p.T584A	1.000	pfam_Muniscin_C-term_mu_dom	pfam_Muniscin_C-term_mu_dom,pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C	-	no_errors	SGIP1	HGNC	ENSG00000118473	tier1	-	-	58	0	0.00	35	12	25.53
SGSM2	0	genome.wustl.edu	37	17	2276309	2276309	+	Silent	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	2276309	2276309	C	T	SNP	SGSM2	ENST00000268989	human	ensembl	74_37	+1	known	silent	c.1851	p.R617	0.969	superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Run,pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Run,smart_Rab-GTPase-TBC_dom,pfscan_Run,pfscan_Rab-GTPase-TBC_dom	-	no_errors	SGSM2	HGNC	ENSG00000141258	tier1	-	-	80	0	0.00	67	11	14.10
SGSM2	0	genome.wustl.edu	37	17	2276309	2276309	+	Silent	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	2276309	2276309	C	T	SNP	SGSM2	ENST00000268989	human	ensembl	74_37	+1	known	silent	c.1851	p.R617	0.969	superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Run,pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Run,smart_Rab-GTPase-TBC_dom,pfscan_Run,pfscan_Rab-GTPase-TBC_dom	-	no_errors	SGSM2	HGNC	ENSG00000141258	tier1	-	-	90	0	0.00	67	11	14.10
SH3BP1	0	genome.wustl.edu	37	22	38061577	38061577	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	22	38061577	38061577	C	T	SNP	SH3BP1	ENST00000599616	human	ensembl	74_37	+1	known	missense	c.1517	p.A506V	0.810	superfamily_HAD-like_dom	pfam_RhoGAP_dom,pfam_BAR_dom,superfamily_Rho_GTPase_activation_prot,superfamily_HAD-like_dom,smart_RhoGAP_dom,pfscan_BAR_dom,pfscan_RhoGAP_dom	-	no_errors	SH3BP1	HGNC	ENSG00000100092	tier1	-	-	41	0	0.00	38	4	9.52
SH3BP1	0	genome.wustl.edu	37	22	38061577	38061577	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	22	38061577	38061577	C	T	SNP	SH3BP1	ENST00000599616	human	ensembl	74_37	+1	known	missense	c.1517	p.A506V	0.810	superfamily_HAD-like_dom	pfam_RhoGAP_dom,pfam_BAR_dom,superfamily_Rho_GTPase_activation_prot,superfamily_HAD-like_dom,smart_RhoGAP_dom,pfscan_BAR_dom,pfscan_RhoGAP_dom	-	no_errors	SH3BP1	HGNC	ENSG00000100092	tier1	-	-	58	0	0.00	38	4	9.52
SHE	0	genome.wustl.edu	37	1	154474133	154474133	+	Silent	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	154474133	154474133	G	T	SNP	SHE	ENST00000304760	human	ensembl	74_37	-1	known	silent	c.370	p.R124	0.993	NULL	pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2	-	no_errors	SHE	HGNC	ENSG00000169291				18	0	0.00	18	2	10.00
SHROOM3	0	genome.wustl.edu	37	4	77652020	77652020	+	Silent	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	77652020	77652020	C	T	SNP	SHROOM3	ENST00000296043	human	ensembl	74_37	+1	known	silent	c.519	p.P173	0.000	NULL	pfam_ASD2,pfam_ASD1,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SHROOM3	HGNC	ENSG00000138771	tier1	-	-	66	0	0.00	31	7	18.42
SHROOM3	0	genome.wustl.edu	37	4	77652020	77652020	+	Silent	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	77652020	77652020	C	T	SNP	SHROOM3	ENST00000296043	human	ensembl	74_37	+1	known	silent	c.519	p.P173	0.000	NULL	pfam_ASD2,pfam_ASD1,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SHROOM3	HGNC	ENSG00000138771	tier1	-	-	89	0	0.00	31	7	18.42
SIPA1L2	0	genome.wustl.edu	37	1	232650209	232650209	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	232650209	232650209	G	A	SNP	SIPA1L2	ENST00000262861	human	ensembl	74_37	-1	known	nonsense	c.877	p.R293*	0.977	NULL	pfam_DUF3401,pfam_Rap_GAP_dom,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1L2	HGNC	ENSG00000116991	tier1	-	-	35	0	0.00	26	7	21.21
SIPA1L2	0	genome.wustl.edu	37	1	232650209	232650209	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	232650209	232650209	G	A	SNP	SIPA1L2	ENST00000262861	human	ensembl	74_37	-1	known	nonsense	c.877	p.R293*	0.977	NULL	pfam_DUF3401,pfam_Rap_GAP_dom,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1L2	HGNC	ENSG00000116991	tier1	-	-	45	0	0.00	26	7	21.21
SLC12A1	0	genome.wustl.edu	37	15	48519305	48519305	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	48519305	48519305	G	A	SNP	SLC12A1	ENST00000396577	human	ensembl	74_37	+1	known	missense	c.658	p.V220M	1.000	pfam_AA-permease/SLC12A_dom,tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,pfam_AA_permease_N,prints_Na/K/Cl_cotranspt2,prints_Na/K/Cl_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A1	HGNC	ENSG00000074803	tier1	-	-	101	0	0.00	60	4	6.25
SLC12A1	0	genome.wustl.edu	37	15	48519305	48519305	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	48519305	48519305	G	A	SNP	SLC12A1	ENST00000396577	human	ensembl	74_37	+1	known	missense	c.658	p.V220M	1.000	pfam_AA-permease/SLC12A_dom,tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,pfam_AA_permease_N,prints_Na/K/Cl_cotranspt2,prints_Na/K/Cl_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A1	HGNC	ENSG00000074803	tier1	-	-	51	0	0.00	60	4	6.25
SLC12A5	0	genome.wustl.edu	37	20	44685162	44685162	+	Silent	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	20	44685162	44685162	T	A	SNP	SLC12A5	ENST00000454036	human	ensembl	74_37	+1	known	silent	c.3138	p.P1046	0.001	tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,prints_KCL_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A5	HGNC	ENSG00000124140	tier1	-	-	102	0	0.00	63	43	40.57
SLC12A5	0	genome.wustl.edu	37	20	44685162	44685162	+	Silent	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	20	44685162	44685162	T	A	SNP	SLC12A5	ENST00000454036	human	ensembl	74_37	+1	known	silent	c.3138	p.P1046	0.001	tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,prints_KCL_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A5	HGNC	ENSG00000124140	tier1	-	-	97	0	0.00	63	43	40.57
SLC12A6	0	genome.wustl.edu	37	15	34546623	34546623	+	Silent	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	34546623	34546623	C	A	SNP	SLC12A6	ENST00000558589	human	ensembl	74_37	-1	known	silent	c.1017	p.L339	1.000	pfam_AA-permease/SLC12A_dom,tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,pfam_K/Cl_cotranspt_1/3,prints_KCL_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A6	HGNC	ENSG00000140199	tier1	-	-	74	0	0.00	58	5	7.81
SLC12A6	0	genome.wustl.edu	37	15	34546623	34546623	+	Silent	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	34546623	34546623	C	A	SNP	SLC12A6	ENST00000558589	human	ensembl	74_37	-1	known	silent	c.1017	p.L339	1.000	pfam_AA-permease/SLC12A_dom,tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,pfam_K/Cl_cotranspt_1/3,prints_KCL_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A6	HGNC	ENSG00000140199	tier1	-	-	84	0	0.00	58	5	7.81
SLC18B1	0	genome.wustl.edu	37	6	133097560	133097560	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	133097560	133097560	T	G	SNP	SLC18B1	ENST00000275227	human	ensembl	74_37	-1	known	missense	c.804	p.L268F	0.972	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC18B1	HGNC	ENSG00000146409	tier1	rs60263064	-	55	0	0.00	55	5	8.33
SLC24A3	0	genome.wustl.edu	37	20	19673907	19673907	+	Silent	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	20	19673907	19673907	T	A	SNP	SLC24A3	ENST00000328041	human	ensembl	74_37	+1	known	silent	c.1329	p.G443	0.909	tigrfam_K/Na/Ca-exchanger	pfam_NaCa_Exmemb,tigrfam_K/Na/Ca-exchanger	-	no_errors	SLC24A3	HGNC	ENSG00000185052	tier1	-	-	84	0	0.00	88	6	6.32
SLC25A19	0	genome.wustl.edu	37	17	73279593	73279593	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	73279593	73279593	A	G	SNP	SLC25A19	ENST00000320362	human	ensembl	74_37	-1	known	missense	c.370	p.C124R	1.000	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier	-	no_errors	SLC25A19	HGNC	ENSG00000125454	tier1	-	-	105	0	0.00	51	13	20.31
SLC25A19	0	genome.wustl.edu	37	17	73279593	73279593	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	73279593	73279593	A	G	SNP	SLC25A19	ENST00000320362	human	ensembl	74_37	-1	known	missense	c.370	p.C124R	1.000	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier	-	no_errors	SLC25A19	HGNC	ENSG00000125454	tier1	-	-	86	0	0.00	51	13	20.31
SLC25A25	0	genome.wustl.edu	37	9	130864363	130864363	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	130864363	130864363	C	T	SNP	SLC25A25	ENST00000373069	human	ensembl	74_37	+1	known	nonsense	c.481	p.R161*	1.000	NULL	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier,prints_Graves_DC	-	no_errors	SLC25A25	HGNC	ENSG00000148339				80	0	0.00	65	4	5.80
SLC25A3P1	0	genome.wustl.edu	37	1	53904718	53904718	+	RNA	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	53904718	53904718	A	C	SNP	SLC25A3P1	ENST00000562700	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.993	-	-	-	no_errors	SLC25A3P1	HGNC	ENSG00000236253	tier1	-	-	12	0	0.00	6	4	40.00
SLC25A3P1	0	genome.wustl.edu	37	1	53904718	53904718	+	RNA	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	53904718	53904718	A	C	SNP	SLC25A3P1	ENST00000562700	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.993	-	-	-	no_errors	SLC25A3P1	HGNC	ENSG00000236253	tier1	-	-	9	0	0.00	6	4	40.00
SLC27A2	0	genome.wustl.edu	37	15	50519256	50519256	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	50519256	50519256	G	T	SNP	SLC27A2	ENST00000267842	human	ensembl	74_37	+1	known	missense	c.1338	p.E446D	1.000	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	SLC27A2	HGNC	ENSG00000140284				46	0	0.00	29	2	6.25
SLC27A5	0	genome.wustl.edu	37	19	59022820	59022820	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	59022820	59022820	C	A	SNP	SLC27A5	ENST00000263093	human	ensembl	74_37	-1	known	missense	c.503	p.S168I	0.000	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	SLC27A5	HGNC	ENSG00000083807	tier1	-	-	73	0	0.00	44	5	10.20
SLC31A2	0	genome.wustl.edu	37	9	115923847	115923847	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	115923847	115923847	G	T	SNP	SLC31A2	ENST00000259392	human	ensembl	74_37	+1	known	missense	c.132	p.K44N	1.000	pfam_Cop_transporter	pfam_Cop_transporter	-	no_errors	SLC31A2	HGNC	ENSG00000136867	tier1	-	-	66	0	0.00	49	6	10.91
SLC31A2	0	genome.wustl.edu	37	9	115923847	115923847	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	115923847	115923847	G	T	SNP	SLC31A2	ENST00000259392	human	ensembl	74_37	+1	known	missense	c.132	p.K44N	1.000	pfam_Cop_transporter	pfam_Cop_transporter	-	no_errors	SLC31A2	HGNC	ENSG00000136867	tier1	-	-	73	0	0.00	49	6	10.91
SLC35D1	0	genome.wustl.edu	37	1	67519675	67519675	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	67519675	67519675	G	A	SNP	SLC35D1	ENST00000235345	human	ensembl	74_37	-1	known	nonsense	c.22	p.Q8*	1.000	NULL	pfam_Tpt_PEP_trans_dom	-	no_errors	SLC35D1	HGNC	ENSG00000116704	tier1	-	-	84	0	0.00	55	9	14.06
SLC35D1	0	genome.wustl.edu	37	1	67519675	67519675	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	67519675	67519675	G	A	SNP	SLC35D1	ENST00000235345	human	ensembl	74_37	-1	known	nonsense	c.22	p.Q8*	1.000	NULL	pfam_Tpt_PEP_trans_dom	-	no_errors	SLC35D1	HGNC	ENSG00000116704	tier1	-	-	99	0	0.00	55	9	14.06
SLC39A5	0	genome.wustl.edu	37	12	56631322	56631322	+	RNA	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	56631322	56631322	T	A	SNP	SLC39A5	ENST00000419232	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SLC39A5	HGNC	ENSG00000139540	tier1	-	-	24	0	0.00	5	6	54.55
SLC39A5	0	genome.wustl.edu	37	12	56631322	56631322	+	RNA	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	56631322	56631322	T	A	SNP	SLC39A5	ENST00000419232	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SLC39A5	HGNC	ENSG00000139540	tier1	-	-	30	0	0.00	5	6	54.55
SLC39A6	0	genome.wustl.edu	37	18	33692509	33692509	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	18	33692509	33692509	T	C	SNP	SLC39A6	ENST00000269187	human	ensembl	74_37	-1	known	missense	c.1879	p.S627G	1.000	pfam_ZIP	pfam_ZIP	-	no_errors	SLC39A6	HGNC	ENSG00000141424				53	0	0.00	19	3	13.64
SLC39A7	0	genome.wustl.edu	37	6	33171987	33171987	+	RNA	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	33171987	33171987	G	T	SNP	SLC39A7	ENST00000463972	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	SLC39A7	HGNC	ENSG00000112473	tier1	-	-	55	0	0.00	31	4	11.43
SLC39A7	0	genome.wustl.edu	37	6	33171987	33171987	+	RNA	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	33171987	33171987	G	T	SNP	SLC39A7	ENST00000463972	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	SLC39A7	HGNC	ENSG00000112473	tier1	-	-	76	0	0.00	31	4	11.43
SLC44A3	0	genome.wustl.edu	37	1	95286603	95286603	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	95286603	95286603	G	A	SNP	SLC44A3	ENST00000271227	human	ensembl	74_37	+1	known	nonsense	c.126	p.W42*	1.000	NULL	pfam_Choline_transptr-like	-	no_errors	SLC44A3	HGNC	ENSG00000143036	tier1	-	-	21	0	0.00	14	8	36.36
SLC44A3	0	genome.wustl.edu	37	1	95286603	95286603	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	95286603	95286603	G	A	SNP	SLC44A3	ENST00000271227	human	ensembl	74_37	+1	known	nonsense	c.126	p.W42*	1.000	NULL	pfam_Choline_transptr-like	-	no_errors	SLC44A3	HGNC	ENSG00000143036	tier1	-	-	24	0	0.00	14	8	36.36
SLC45A4	0	genome.wustl.edu	37	8	142222452	142222452	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	142222452	142222452	G	C	SNP	SLC45A4	ENST00000517878	human	ensembl	74_37	-1	known	missense	c.2145	p.I715M	1.000	superfamily_MFS_dom_general_subst_transpt	superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC45A4	HGNC	ENSG00000022567	tier1	-	-	68	0	0.00	31	14	31.11
SLC45A4	0	genome.wustl.edu	37	8	142222452	142222452	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	142222452	142222452	G	C	SNP	SLC45A4	ENST00000517878	human	ensembl	74_37	-1	known	missense	c.2145	p.I715M	1.000	superfamily_MFS_dom_general_subst_transpt	superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC45A4	HGNC	ENSG00000022567	tier1	-	-	87	0	0.00	31	14	31.11
SLC6A15	0	genome.wustl.edu	37	12	85267002	85267002	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	85267002	85267002	T	G	SNP	SLC6A15	ENST00000266682	human	ensembl	74_37	-1	known	missense	c.973	p.K325Q	1.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_orphan	-	no_errors	SLC6A15	HGNC	ENSG00000072041	tier1	-	-	132	0	0.00	103	7	6.36
SLC6A15	0	genome.wustl.edu	37	12	85267002	85267002	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	85267002	85267002	T	G	SNP	SLC6A15	ENST00000266682	human	ensembl	74_37	-1	known	missense	c.973	p.K325Q	1.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_orphan	-	no_errors	SLC6A15	HGNC	ENSG00000072041	tier1	-	-	85	0	0.00	103	7	6.36
SLC7A11	0	genome.wustl.edu	37	4	139153457	139153457	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	139153457	139153457	C	T	SNP	SLC7A11	ENST00000280612	human	ensembl	74_37	-1	known	missense	c.484	p.E162K	0.996	pfam_AA-permease/SLC12A_dom,pfam_AA_transpt_TM,pirsf_AA/rel_permease1,tigrfam_L_AA_transporter	pfam_AA-permease/SLC12A_dom,pfam_AA_transpt_TM,pirsf_AA/rel_permease1,tigrfam_L_AA_transporter	-	no_errors	SLC7A11	HGNC	ENSG00000151012	tier1	-	-	57	0	0.00	38	10	20.83
SLC7A11	0	genome.wustl.edu	37	4	139153457	139153457	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	139153457	139153457	C	T	SNP	SLC7A11	ENST00000280612	human	ensembl	74_37	-1	known	missense	c.484	p.E162K	0.996	pfam_AA-permease/SLC12A_dom,pfam_AA_transpt_TM,pirsf_AA/rel_permease1,tigrfam_L_AA_transporter	pfam_AA-permease/SLC12A_dom,pfam_AA_transpt_TM,pirsf_AA/rel_permease1,tigrfam_L_AA_transporter	-	no_errors	SLC7A11	HGNC	ENSG00000151012	tier1	-	-	91	0	0.00	38	10	20.83
SLC9C1	0	genome.wustl.edu	37	3	111988862	111988862	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	111988862	111988862	T	G	SNP	SLC9C1	ENST00000305815	human	ensembl	74_37	-1	known	missense	c.676	p.S226R	0.006	pfam_Cation/H_exchanger	pfam_Cation/H_exchanger,pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,pfscan_cNMP-bd_dom	-	no_errors	SLC9C1	HGNC	ENSG00000172139	tier1	-	-	110	0	0.00	59	6	9.23
SLC9C1	0	genome.wustl.edu	37	3	111988862	111988862	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	111988862	111988862	T	G	SNP	SLC9C1	ENST00000305815	human	ensembl	74_37	-1	known	missense	c.676	p.S226R	0.006	pfam_Cation/H_exchanger	pfam_Cation/H_exchanger,pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,pfscan_cNMP-bd_dom	-	no_errors	SLC9C1	HGNC	ENSG00000172139	tier1	-	-	57	0	0.00	59	6	9.23
SLCO1B3	0	genome.wustl.edu	37	12	21007980	21007980	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	21007980	21007980	T	A	SNP	SLCO1B3	ENST00000553473	human	ensembl	74_37	+1	known	missense	c.103	p.S35T	0.002	pfam_OA_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO1B3	HGNC	ENSG00000111700	tier1	-	-	41	0	0.00	40	13	24.53
SLCO1B3	0	genome.wustl.edu	37	12	21007980	21007980	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	21007980	21007980	T	A	SNP	SLCO1B3	ENST00000553473	human	ensembl	74_37	+1	known	missense	c.103	p.S35T	0.002	pfam_OA_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO1B3	HGNC	ENSG00000111700	tier1	-	-	84	0	0.00	40	13	24.53
SLFN5	0	genome.wustl.edu	37	17	33592830	33592830	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	33592830	33592830	G	C	SNP	SLFN5	ENST00000299977	human	ensembl	74_37	+1	known	missense	c.2599	p.A867P	0.000	superfamily_P-loop_NTPase	pfam_ATPase_AAA-4,pfam_DUF2075,superfamily_P-loop_NTPase	-	no_errors	SLFN5	HGNC	ENSG00000166750	tier1	-	-	29	0	0.00	24	4	14.29
SLIT3	0	genome.wustl.edu	37	5	168119626	168119626	+	Silent	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	168119626	168119626	C	A	SNP	SLIT3	ENST00000519560	human	ensembl	74_37	-1	known	silent	c.3162	p.L1054	1.000	pfam_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_Leu-rich_rpt,pfam_Laminin_G,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl_sf,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT3	HGNC	ENSG00000184347	tier1	-	-	43	0	0.00	19	12	38.71
SLIT3	0	genome.wustl.edu	37	5	168119626	168119626	+	Silent	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	168119626	168119626	C	A	SNP	SLIT3	ENST00000519560	human	ensembl	74_37	-1	known	silent	c.3162	p.L1054	1.000	pfam_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_Leu-rich_rpt,pfam_Laminin_G,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl_sf,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT3	HGNC	ENSG00000184347	tier1	-	-	70	0	0.00	19	12	38.71
SLIT3	0	genome.wustl.edu	37	5	168119639	168119639	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	168119639	168119639	T	G	SNP	SLIT3	ENST00000519560	human	ensembl	74_37	-1	known	missense	c.3149	p.K1050T	1.000	pfam_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_Leu-rich_rpt,pfam_Laminin_G,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl_sf,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT3	HGNC	ENSG00000184347				63	0	0.00	27	3	10.00
SMAD4	0	genome.wustl.edu	37	18	48591805	48591805	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	18	48591805	48591805	G	T	SNP	SMAD4	ENST00000342988	human	ensembl	74_37	+1	known	missense	c.968	p.W323L	1.000	pfam_SMAD_dom_Dwarfin-type,superfamily_SMAD_FHA_domain,smart_SMAD_dom_Dwarfin-type,pfscan_SMAD_dom_Dwarfin-type	pfam_SMAD_dom_Dwarfin-type,pfam_MAD_homology1_Dwarfin-type,superfamily_SMAD_FHA_domain,superfamily_MAD_homology_MH1,smart_MAD_homology1_Dwarfin-type,smart_SMAD_dom_Dwarfin-type,pfscan_MAD_homology_MH1,pfscan_SMAD_dom_Dwarfin-type	-	no_errors	SMAD4	HGNC	ENSG00000141646				68	0	0.00	36	2	5.26
SMARCA2	0	genome.wustl.edu	37	9	2033024	2033024	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	2033024	2033024	C	T	SNP	SMARCA2	ENST00000349721	human	ensembl	74_37	+1	known	nonsense	c.298	p.R100*	1.000	NULL	pfam_SNF2_N,pfam_Bromodomain,pfam_BRK_domain,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,pfam_Gln-Leu-Gln_QLQ,superfamily_P-loop_NTPase,superfamily_Bromodomain,superfamily_RNaseH-like_dom,smart_Gln-Leu-Gln_QLQ,smart_HAS_subgr,smart_BRK_domain,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Bromodomain,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	SMARCA2	HGNC	ENSG00000080503	tier1	-	-	80	0	0.00	46	4	8.00
SMARCA4	0	genome.wustl.edu	37	19	11144051	11144051	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	11144051	11144051	A	C	SNP	SMARCA4	ENST00000358026	human	ensembl	74_37	+1	known	missense	c.3632	p.E1211A	1.000	superfamily_P-loop_NTPase,pfscan_Helicase_C	pfam_SNF2_N,pfam_Bromodomain,pfam_BRK_domain,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,pfam_Gln-Leu-Gln_QLQ,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_Gln-Leu-Gln_QLQ,smart_HAS_subgr,smart_BRK_domain,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Bromodomain,prints_Bromodomain,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Bromodomain	-	no_errors	SMARCA4	HGNC	ENSG00000127616	tier1	-	-	61	0	0.00	46	4	8.00
SMARCA4	0	genome.wustl.edu	37	19	11144051	11144051	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	11144051	11144051	A	C	SNP	SMARCA4	ENST00000358026	human	ensembl	74_37	+1	known	missense	c.3632	p.E1211A	1.000	superfamily_P-loop_NTPase,pfscan_Helicase_C	pfam_SNF2_N,pfam_Bromodomain,pfam_BRK_domain,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,pfam_Gln-Leu-Gln_QLQ,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_Gln-Leu-Gln_QLQ,smart_HAS_subgr,smart_BRK_domain,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Bromodomain,prints_Bromodomain,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Bromodomain	-	no_errors	SMARCA4	HGNC	ENSG00000127616	tier1	-	-	71	0	0.00	46	4	8.00
SMURF2	0	genome.wustl.edu	37	17	62567980	62567980	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	62567980	62567980	G	T	SNP	SMURF2	ENST00000262435	human	ensembl	74_37	-1	known	missense	c.952	p.H318N	1.000	pfam_WW_dom,superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_C2_dom,superfamily_WW_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom	-	no_errors	SMURF2	HGNC	ENSG00000108854	tier1	-	-	49	0	0.00	37	4	9.76
SMURF2	0	genome.wustl.edu	37	17	62567980	62567980	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	62567980	62567980	G	T	SNP	SMURF2	ENST00000262435	human	ensembl	74_37	-1	known	missense	c.952	p.H318N	1.000	pfam_WW_dom,superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_C2_dom,superfamily_WW_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom	-	no_errors	SMURF2	HGNC	ENSG00000108854	tier1	-	-	80	0	0.00	37	4	9.76
SNAI1	0	genome.wustl.edu	37	20	48604467	48604467	+	Silent	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	20	48604467	48604467	G	A	SNP	SNAI1	ENST00000244050	human	ensembl	74_37	+1	known	silent	c.669	p.L223	0.993	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SNAI1	HGNC	ENSG00000124216				68	0	0.00	62	4	6.06
SNORD116-29	0	genome.wustl.edu	37	15	25351694	25351694	+	RNA	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	25351694	25351694	A	G	SNP	SNORD116-29	ENST00000384516	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SNORD116-29	HGNC	ENSG00000207245	tier1	-	-	102	0	0.00	49	14	22.22
SNORD116-29	0	genome.wustl.edu	37	15	25351694	25351694	+	RNA	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	25351694	25351694	A	G	SNP	SNORD116-29	ENST00000384516	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SNORD116-29	HGNC	ENSG00000207245	tier1	-	-	123	0	0.00	49	14	22.22
SNRNP48	0	genome.wustl.edu	37	6	7605703	7605703	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	7605703	7605703	G	A	SNP	SNRNP48	ENST00000342415	human	ensembl	74_37	+1	known	missense	c.790	p.E264K	0.053	NULL	pfam_TRM13/UPF0224_CHHC_Znf_dom	-	no_errors	SNRNP48	HGNC	ENSG00000168566	tier1	-	-	61	0	0.00	51	5	8.93
SNRNP48	0	genome.wustl.edu	37	6	7605703	7605703	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	7605703	7605703	G	A	SNP	SNRNP48	ENST00000342415	human	ensembl	74_37	+1	known	missense	c.790	p.E264K	0.053	NULL	pfam_TRM13/UPF0224_CHHC_Znf_dom	-	no_errors	SNRNP48	HGNC	ENSG00000168566	tier1	-	-	84	0	0.00	51	5	8.93
SOBP	0	genome.wustl.edu	37	6	107955088	107955088	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	107955088	107955088	C	T	SNP	SOBP	ENST00000317357	human	ensembl	74_37	+1	known	missense	c.1040	p.T347M	1.000	NULL	NULL	-	no_errors	SOBP	HGNC	ENSG00000112320	tier1	-	-	31	0	0.00	12	4	25.00
SOBP	0	genome.wustl.edu	37	6	107955088	107955088	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	107955088	107955088	C	T	SNP	SOBP	ENST00000317357	human	ensembl	74_37	+1	known	missense	c.1040	p.T347M	1.000	NULL	NULL	-	no_errors	SOBP	HGNC	ENSG00000112320	tier1	-	-	53	0	0.00	12	4	25.00
SOCS4	0	genome.wustl.edu	37	14	55510261	55510261	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	55510261	55510261	C	G	SNP	SOCS4	ENST00000339298	human	ensembl	74_37	+1	known	missense	c.502	p.Q168E	0.007	NULL	pfam_SOCS,pfam_SOCS_C,pfam_SH2,smart_SH2,smart_SOCS_C,pfscan_SOCS_C,pfscan_SH2	-	no_errors	SOCS4	HGNC	ENSG00000180008	tier1	-	-	56	0	0.00	44	30	40.54
SOCS4	0	genome.wustl.edu	37	14	55510261	55510261	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	55510261	55510261	C	G	SNP	SOCS4	ENST00000339298	human	ensembl	74_37	+1	known	missense	c.502	p.Q168E	0.007	NULL	pfam_SOCS,pfam_SOCS_C,pfam_SH2,smart_SH2,smart_SOCS_C,pfscan_SOCS_C,pfscan_SH2	-	no_errors	SOCS4	HGNC	ENSG00000180008	tier1	-	-	76	0	0.00	44	30	40.54
SORCS3	0	genome.wustl.edu	37	10	106960907	106960907	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	106960907	106960907	A	C	SNP	SORCS3	ENST00000369701	human	ensembl	74_37	+1	known	missense	c.2157	p.K719N	1.000	smart_VPS10	pfam_PKD_dom,superfamily_PKD_dom,smart_VPS10,pfscan_PKD_dom	-	no_errors	SORCS3	HGNC	ENSG00000156395	tier1	-	-	57	0	0.00	38	6	13.64
SORCS3	0	genome.wustl.edu	37	10	106960907	106960907	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	106960907	106960907	A	C	SNP	SORCS3	ENST00000369701	human	ensembl	74_37	+1	known	missense	c.2157	p.K719N	1.000	smart_VPS10	pfam_PKD_dom,superfamily_PKD_dom,smart_VPS10,pfscan_PKD_dom	-	no_errors	SORCS3	HGNC	ENSG00000156395	tier1	-	-	70	0	0.00	38	6	13.64
SORL1	0	genome.wustl.edu	37	11	121393350	121393350	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	121393350	121393350	T	A	SNP	SORL1	ENST00000260197	human	ensembl	74_37	+1	known	missense	c.1460	p.L487H	1.000	smart_VPS10	pfam_LDrepeatLR_classA_rpt,pfam_Fibronectin_type3,pfam_LDLR_classB_rpt,superfamily_Fibronectin_type3,superfamily_LDrepeatLR_classA_rpt,smart_VPS10,smart_LDLR_classB_rpt,smart_LDrepeatLR_classA_rpt,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	SORL1	HGNC	ENSG00000137642	tier1	-	-	53	0	0.00	17	6	26.09
SORL1	0	genome.wustl.edu	37	11	121393350	121393350	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	121393350	121393350	T	A	SNP	SORL1	ENST00000260197	human	ensembl	74_37	+1	known	missense	c.1460	p.L487H	1.000	smart_VPS10	pfam_LDrepeatLR_classA_rpt,pfam_Fibronectin_type3,pfam_LDLR_classB_rpt,superfamily_Fibronectin_type3,superfamily_LDrepeatLR_classA_rpt,smart_VPS10,smart_LDLR_classB_rpt,smart_LDrepeatLR_classA_rpt,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	SORL1	HGNC	ENSG00000137642	tier1	-	-	63	0	0.00	17	6	26.09
SOX5	0	genome.wustl.edu	37	12	23687309	23687309	+	Silent	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	23687309	23687309	A	C	SNP	SOX5	ENST00000451604	human	ensembl	74_37	-1	known	silent	c.2136	p.T712	1.000	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX5	HGNC	ENSG00000134532	tier1	-	-	37	0	0.00	26	14	35.00
SOX5	0	genome.wustl.edu	37	12	23687309	23687309	+	Silent	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	23687309	23687309	A	C	SNP	SOX5	ENST00000451604	human	ensembl	74_37	-1	known	silent	c.2136	p.T712	1.000	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX5	HGNC	ENSG00000134532	tier1	-	-	54	0	0.00	26	14	35.00
SPATA31A3	0	genome.wustl.edu	37	9	40702808	40702808	+	Silent	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	40702808	40702808	G	A	SNP	SPATA31A3	ENST00000356699	human	ensembl	74_37	+1	known	silent	c.465	p.P155	0.000	NULL	NULL	-	no_errors	SPATA31A3	HGNC	ENSG00000147926				360	0	0.00	153	19	10.98
SPATA31D5P	0	genome.wustl.edu	37	9	84532403	84532403	+	RNA	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	84532403	84532403	C	G	SNP	SPATA31D5P	ENST00000527857	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SPATA31D5P	HGNC	ENSG00000240632	tier1	-	-	123	0	0.00	106	19	15.20
SPATA31D5P	0	genome.wustl.edu	37	9	84532403	84532403	+	RNA	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	84532403	84532403	C	G	SNP	SPATA31D5P	ENST00000527857	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SPATA31D5P	HGNC	ENSG00000240632	tier1	-	-	77	0	0.00	106	19	15.20
SPATS2L	0	genome.wustl.edu	37	2	201284107	201284107	+	Silent	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	201284107	201284107	C	T	SNP	SPATS2L	ENST00000409755	human	ensembl	74_37	+1	known	silent	c.423	p.C141	0.715	pfam_DUF1387	pfam_DUF1387,superfamily_UBA-like	-	no_errors	SPATS2L	HGNC	ENSG00000196141	tier1	-	-	44	0	0.00	26	4	13.33
SPATS2L	0	genome.wustl.edu	37	2	201284107	201284107	+	Silent	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	201284107	201284107	C	T	SNP	SPATS2L	ENST00000409755	human	ensembl	74_37	+1	known	silent	c.423	p.C141	0.715	pfam_DUF1387	pfam_DUF1387,superfamily_UBA-like	-	no_errors	SPATS2L	HGNC	ENSG00000196141	tier1	-	-	65	0	0.00	26	4	13.33
SPDYE2	0	genome.wustl.edu	37	7	102196355	102196355	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	102196355	102196355	G	T	SNP	SPDYE2	ENST00000507918	human	ensembl	74_37	+1	known	missense	c.388	p.V130L	0.334	NULL	pfam_Cell_cycle_regulatory_Spy1	-	no_errors	SPDYE2	HGNC	ENSG00000205238	tier1	-	-	22	0	0.00	2	68	97.14
SPEG	0	genome.wustl.edu	37	2	220355177	220355177	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	220355177	220355177	C	T	SNP	SPEG	ENST00000312358	human	ensembl	74_37	+1	novel	nonsense	c.8968	p.R2990*	0.759	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	SPEG	HGNC	ENSG00000072195	tier1	-	-	63	0	0.00	19	29	60.42
SPEG	0	genome.wustl.edu	37	2	220355177	220355177	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	220355177	220355177	C	T	SNP	SPEG	ENST00000312358	human	ensembl	74_37	+1	novel	nonsense	c.8968	p.R2990*	0.759	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	SPEG	HGNC	ENSG00000072195	tier1	-	-	66	0	0.00	19	29	60.42
SPHKAP	0	genome.wustl.edu	37	2	228860248	228860248	+	Silent	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	228860248	228860248	G	C	SNP	SPHKAP	ENST00000392056	human	ensembl	74_37	-1	known	silent	c.4611	p.L1537	1.000	NULL	pfam_AKAP_110_C	-	no_errors	SPHKAP	HGNC	ENSG00000153820	tier1	-	-	34	0	0.00	31	13	29.55
SPHKAP	0	genome.wustl.edu	37	2	228860248	228860248	+	Silent	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	228860248	228860248	G	C	SNP	SPHKAP	ENST00000392056	human	ensembl	74_37	-1	known	silent	c.4611	p.L1537	1.000	NULL	pfam_AKAP_110_C	-	no_errors	SPHKAP	HGNC	ENSG00000153820	tier1	-	-	47	0	0.00	31	13	29.55
SPINK5	0	genome.wustl.edu	37	5	147513406	147513406	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	147513406	147513406	G	T	SNP	SPINK5	ENST00000359874	human	ensembl	74_37	+1	known	nonsense	c.3232	p.E1078*	0.866	NULL	pfam_Kazal_dom,smart_Kazal_dom	-	no_errors	SPINK5	HGNC	ENSG00000133710	tier1	-	-	104	0	0.00	50	4	7.41
SPINK5	0	genome.wustl.edu	37	5	147513406	147513406	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	147513406	147513406	G	T	SNP	SPINK5	ENST00000359874	human	ensembl	74_37	+1	known	nonsense	c.3232	p.E1078*	0.866	NULL	pfam_Kazal_dom,smart_Kazal_dom	-	no_errors	SPINK5	HGNC	ENSG00000133710	tier1	-	-	136	0	0.00	50	4	7.41
SPNS3	0	genome.wustl.edu	37	17	4352620	4352620	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	4352620	4352620	G	T	SNP	SPNS3	ENST00000355530	human	ensembl	74_37	+1	known	missense	c.861	p.E287D	0.481	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SPNS3	HGNC	ENSG00000182557	tier1	-	-	37	0	0.00	29	4	12.12
SPNS3	0	genome.wustl.edu	37	17	4352620	4352620	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	4352620	4352620	G	T	SNP	SPNS3	ENST00000355530	human	ensembl	74_37	+1	known	missense	c.861	p.E287D	0.481	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SPNS3	HGNC	ENSG00000182557	tier1	-	-	40	0	0.00	29	4	12.12
SPPL3	0	genome.wustl.edu	37	12	121222277	121222277	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	121222277	121222277	C	A	SNP	SPPL3	ENST00000353487	human	ensembl	74_37	-1	known	missense	c.310	p.V104F	1.000	pfam_Peptidase_A22B_SPP,smart_Preselin/SPP	pfam_Peptidase_A22B_SPP,smart_Preselin/SPP	-	no_errors	SPPL3	HGNC	ENSG00000157837	tier1	-	-	49	0	0.00	46	10	17.86
SPPL3	0	genome.wustl.edu	37	12	121222277	121222277	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	121222277	121222277	C	A	SNP	SPPL3	ENST00000353487	human	ensembl	74_37	-1	known	missense	c.310	p.V104F	1.000	pfam_Peptidase_A22B_SPP,smart_Preselin/SPP	pfam_Peptidase_A22B_SPP,smart_Preselin/SPP	-	no_errors	SPPL3	HGNC	ENSG00000157837	tier1	-	-	58	0	0.00	46	10	17.86
SPTA1	0	genome.wustl.edu	37	1	158617477	158617477	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	158617477	158617477	T	C	SNP	SPTA1	ENST00000368147	human	ensembl	74_37	-1	known	missense	c.3748	p.S1250G	0.311	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,pfscan_EF_hand_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	SPTA1	HGNC	ENSG00000163554	tier1	-	-	30	0	0.00	13	12	48.00
SPTY2D1	0	genome.wustl.edu	37	11	18637267	18637267	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	18637267	18637267	T	A	SNP	SPTY2D1	ENST00000336349	human	ensembl	74_37	-1	known	missense	c.554	p.E185V	1.000	NULL	pfam_Chromatin_SPT2,smart_Chromatin_SPT2	-	no_errors	SPTY2D1	HGNC	ENSG00000179119	tier1	-	-	133	0	0.00	84	16	16.00
SPTY2D1	0	genome.wustl.edu	37	11	18637267	18637267	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	18637267	18637267	T	A	SNP	SPTY2D1	ENST00000336349	human	ensembl	74_37	-1	known	missense	c.554	p.E185V	1.000	NULL	pfam_Chromatin_SPT2,smart_Chromatin_SPT2	-	no_errors	SPTY2D1	HGNC	ENSG00000179119	tier1	-	-	91	0	0.00	84	16	16.00
SRP72	0	genome.wustl.edu	37	4	57350944	57350944	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	57350944	57350944	A	T	SNP	SRP72	ENST00000342756	human	ensembl	74_37	+1	known	missense	c.1000	p.S334C	1.000	NULL	pfam_Signal_recog_part_SRP72_RNA-bd,pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	SRP72	HGNC	ENSG00000174780				97	0	0.00	54	5	8.47
SRRM2	0	genome.wustl.edu	37	16	2817411	2817411	+	Silent	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	2817411	2817411	T	G	SNP	SRRM2	ENST00000301740	human	ensembl	74_37	+1	known	silent	c.6882	p.A2294	0.996	NULL	pfam_mRNA_splic_Cwf21	-	no_errors	SRRM2	HGNC	ENSG00000167978	tier1	-	-	50	0	0.00	15	13	46.43
SRRM2	0	genome.wustl.edu	37	16	2817411	2817411	+	Silent	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	2817411	2817411	T	G	SNP	SRRM2	ENST00000301740	human	ensembl	74_37	+1	known	silent	c.6882	p.A2294	0.996	NULL	pfam_mRNA_splic_Cwf21	-	no_errors	SRRM2	HGNC	ENSG00000167978	tier1	-	-	60	0	0.00	15	13	46.43
SSTR3	0	genome.wustl.edu	37	22	37602865	37602865	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	22	37602865	37602865	C	A	SNP	SSTR3	ENST00000328544	human	ensembl	74_37	-1	known	missense	c.978	p.R326S	1.000	pfam_7TM_GPCR_olfarory/Srsx,prints_Somatstn_rcpt_3,prints_Somatstn_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Somatstn_rcpt_3,prints_GPCR_Rhodpsn,prints_Somatstn_rcpt,prints_Somatstn_rcpt_5,prints_Neuropept_B/W_rcpt	-	no_errors	SSTR3	HGNC	ENSG00000183473	tier1	-	-	140	0	0.00	119	9	7.03
SSTR3	0	genome.wustl.edu	37	22	37602865	37602865	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	22	37602865	37602865	C	A	SNP	SSTR3	ENST00000328544	human	ensembl	74_37	-1	known	missense	c.978	p.R326S	1.000	pfam_7TM_GPCR_olfarory/Srsx,prints_Somatstn_rcpt_3,prints_Somatstn_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Somatstn_rcpt_3,prints_GPCR_Rhodpsn,prints_Somatstn_rcpt,prints_Somatstn_rcpt_5,prints_Neuropept_B/W_rcpt	-	no_errors	SSTR3	HGNC	ENSG00000183473	tier1	-	-	175	0	0.00	119	9	7.03
SSUH2	0	genome.wustl.edu	37	3	8661589	8661589	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	8661589	8661589	G	T	SNP	SSUH2	ENST00000544814	human	ensembl	74_37	-1	known	missense	c.1093	p.P365T	1.000	NULL	superfamily_HSP_DnaJ_Cys-rich_dom	-	no_errors	SSUH2	HGNC	ENSG00000125046	tier1	-	-	57	0	0.00	49	4	7.41
SSUH2	0	genome.wustl.edu	37	3	8661589	8661589	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	8661589	8661589	G	T	SNP	SSUH2	ENST00000544814	human	ensembl	74_37	-1	known	missense	c.1093	p.P365T	1.000	NULL	superfamily_HSP_DnaJ_Cys-rich_dom	-	no_errors	SSUH2	HGNC	ENSG00000125046	tier1	-	-	82	0	0.00	49	4	7.41
ST3GAL6	0	genome.wustl.edu	37	3	98490000	98490000	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	98490000	98490000	A	G	SNP	ST3GAL6	ENST00000469105	human	ensembl	74_37	+1	known	missense	c.203	p.E68G	0.175	NULL	NULL	-	no_errors	ST3GAL6	HGNC	ENSG00000064225	tier1	-	-	51	0	0.00	63	6	8.70
ST3GAL6	0	genome.wustl.edu	37	3	98490000	98490000	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	98490000	98490000	A	G	SNP	ST3GAL6	ENST00000469105	human	ensembl	74_37	+1	known	missense	c.203	p.E68G	0.175	NULL	NULL	-	no_errors	ST3GAL6	HGNC	ENSG00000064225	tier1	-	-	97	0	0.00	63	6	8.70
ST5	0	genome.wustl.edu	37	11	8751710	8751710	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	8751710	8751710	G	T	SNP	ST5	ENST00000313726	human	ensembl	74_37	-1	known	nonsense	c.1127	p.S376*	0.055	NULL	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	ST5	HGNC	ENSG00000166444				113	0	0.00	61	5	7.58
STIP1	0	genome.wustl.edu	37	11	63953410	63953410	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	63953410	63953410	A	C	SNP	STIP1	ENST00000358794	human	ensembl	74_37	+1	putative	missense	c.114	p.E38D	0.000	NULL	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,smart_STI1_HS-bd,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	STIP1	HGNC	ENSG00000168439	tier1	-	-	63	0	0.00	47	5	9.62
STIP1	0	genome.wustl.edu	37	11	63953410	63953410	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	63953410	63953410	A	C	SNP	STIP1	ENST00000358794	human	ensembl	74_37	+1	putative	missense	c.114	p.E38D	0.000	NULL	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,smart_STI1_HS-bd,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	STIP1	HGNC	ENSG00000168439	tier1	-	-	87	0	0.00	47	5	9.62
STK33	0	genome.wustl.edu	37	11	8494710	8494710	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	8494710	8494710	C	A	SNP	STK33	ENST00000315204	human	ensembl	74_37	-1	known	missense	c.339	p.E113D	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	STK33	HGNC	ENSG00000130413				68	0	0.00	55	4	6.78
STK36	0	genome.wustl.edu	37	2	219557002	219557002	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	219557002	219557002	T	C	SNP	STK36	ENST00000295709	human	ensembl	74_37	+1	known	missense	c.1901	p.V634A	0.995	superfamily_ARM-type_fold	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	STK36	HGNC	ENSG00000163482	tier1	-	-	37	0	0.00	23	6	20.69
STK36	0	genome.wustl.edu	37	2	219557002	219557002	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	219557002	219557002	T	C	SNP	STK36	ENST00000295709	human	ensembl	74_37	+1	known	missense	c.1901	p.V634A	0.995	superfamily_ARM-type_fold	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	STK36	HGNC	ENSG00000163482	tier1	-	-	38	0	0.00	23	6	20.69
STRA8	0	genome.wustl.edu	37	7	134916754	134916754	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	134916754	134916754	G	T	SNP	STRA8	ENST00000275764	human	ensembl	74_37	+1	known	missense	c.24	p.K8N	0.024	NULL	superfamily_bHLH_dom	-	no_errors	STRA8	HGNC	ENSG00000146857				71	0	0.00	33	2	5.71
STT3A	0	genome.wustl.edu	37	11	125482887	125482887	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	125482887	125482887	G	T	SNP	STT3A	ENST00000392708	human	ensembl	74_37	+1	known	missense	c.1369	p.A457S	1.000	pfam_Oligo_trans_STT3	pfam_Oligo_trans_STT3	-	no_errors	STT3A	HGNC	ENSG00000134910	tier1	-	-	56	0	0.00	40	8	16.33
STX18	0	genome.wustl.edu	37	4	4422615	4422615	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	4422615	4422615	C	A	SNP	STX18	ENST00000306200	human	ensembl	74_37	-1	known	missense	c.888	p.K296N	0.999	NULL	pfam_Syntaxin-18_N	-	no_errors	STX18	HGNC	ENSG00000168818	tier1	-	-	134	0	0.00	49	11	18.03
STX18	0	genome.wustl.edu	37	4	4422615	4422615	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	4422615	4422615	C	A	SNP	STX18	ENST00000306200	human	ensembl	74_37	-1	known	missense	c.888	p.K296N	0.999	NULL	pfam_Syntaxin-18_N	-	no_errors	STX18	HGNC	ENSG00000168818	tier1	-	-	84	0	0.00	49	11	18.03
SULT6B1	0	genome.wustl.edu	37	2	37410582	37410582	+	Nonsense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	37410582	37410582	C	A	SNP	SULT6B1	ENST00000535679	human	ensembl	74_37	-1	known	nonsense	c.388	p.E130*	0.676	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	SULT6B1	HGNC	ENSG00000138068	tier1	-	-	37	0	0.00	55	4	6.78
SULT6B1	0	genome.wustl.edu	37	2	37410582	37410582	+	Nonsense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	37410582	37410582	C	A	SNP	SULT6B1	ENST00000535679	human	ensembl	74_37	-1	known	nonsense	c.388	p.E130*	0.676	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	SULT6B1	HGNC	ENSG00000138068	tier1	-	-	64	0	0.00	55	4	6.78
SUSD2	0	genome.wustl.edu	37	22	24581898	24581898	+	Splice_Site	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	22	24581898	24581898	G	T	SNP	SUSD2	ENST00000358321	human	ensembl	74_37	+1	known	splice_site	c.1339+1	e8+1	1.000	-	-	-	no_errors	SUSD2	HGNC	ENSG00000099994				82	0	0.00	25	3	10.71
SYNJ2	0	genome.wustl.edu	37	6	158510932	158510932	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	158510932	158510932	C	T	SNP	SYNJ2	ENST00000355585	human	ensembl	74_37	+1	known	missense	c.3518	p.A1173V	0.823	NULL	pfam_Syja_N,pfam_DUF1866,pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_IPPc,pfscan_RRM_dom,pfscan_Syja_N	-	no_errors	SYNJ2	HGNC	ENSG00000078269	tier1	-	-	38	0	0.00	38	5	11.63
SYNJ2	0	genome.wustl.edu	37	6	158510932	158510932	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	158510932	158510932	C	T	SNP	SYNJ2	ENST00000355585	human	ensembl	74_37	+1	known	missense	c.3518	p.A1173V	0.823	NULL	pfam_Syja_N,pfam_DUF1866,pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_IPPc,pfscan_RRM_dom,pfscan_Syja_N	-	no_errors	SYNJ2	HGNC	ENSG00000078269	tier1	-	-	46	0	0.00	38	5	11.63
TACC2	0	genome.wustl.edu	37	10	123846540	123846540	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	123846540	123846540	T	G	SNP	TACC2	ENST00000334433	human	ensembl	74_37	+1	known	missense	c.4525	p.L1509V	0.036	NULL	pfam_TACC	-	no_errors	TACC2	HGNC	ENSG00000138162	tier1	-	-	65	0	0.00	33	9	20.93
TAF3	0	genome.wustl.edu	37	10	8005880	8005881	+	Splice_Site	INS	-	-	AGA			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	8005880	8005881	-	AGA	INS	TAF3	ENST00000344293	human	ensembl	74_37	+1	known	splice_site_ins	c.410-3_410-2	e3-2	0.602:1.000	-	-	-	no_errors	TAF3	HGNC	ENSG00000165632	tier1			29	0	0.00	22	4	15.38
TAF3	0	genome.wustl.edu	37	10	8005880	8005881	+	Splice_Site	INS	-	-	AGA			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	8005880	8005881	-	AGA	INS	TAF3	ENST00000344293	human	ensembl	74_37	+1	known	splice_site_ins	c.410-3_410-2	e3-2	0.602:1.000	-	-	-	no_errors	TAF3	HGNC	ENSG00000165632	tier1			33	0	0.00	22	4	15.38
TANK	0	genome.wustl.edu	37	2	162036360	162036360	+	RNA	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	162036360	162036360	G	T	SNP	TANK	ENST00000463502	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.073	-	-	-	no_errors	TANK	HGNC	ENSG00000136560	tier1	-	-	31	0	0.00	38	7	15.56
TANK	0	genome.wustl.edu	37	2	162036360	162036360	+	RNA	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	162036360	162036360	G	T	SNP	TANK	ENST00000463502	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.073	-	-	-	no_errors	TANK	HGNC	ENSG00000136560	tier1	-	-	45	0	0.00	38	7	15.56
TANK	0	genome.wustl.edu	37	2	162036361	162036361	+	RNA	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	162036361	162036361	A	T	SNP	TANK	ENST00000463502	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.092	-	-	-	no_errors	TANK	HGNC	ENSG00000136560	tier1	-	-	31	0	0.00	38	7	15.56
TANK	0	genome.wustl.edu	37	2	162036361	162036361	+	RNA	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	162036361	162036361	A	T	SNP	TANK	ENST00000463502	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.092	-	-	-	no_errors	TANK	HGNC	ENSG00000136560	tier1	-	-	45	0	0.00	38	7	15.56
TAS1R2	0	genome.wustl.edu	37	1	19181144	19181144	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	19181144	19181144	C	T	SNP	TAS1R2	ENST00000375371	human	ensembl	74_37	-1	novel	missense	c.820	p.V274M	0.087	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3	-	no_errors	TAS1R2	HGNC	ENSG00000179002				33	0	0.00	17	3	15.00
TAS2R30	0	genome.wustl.edu	37	12	11286090	11286090	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	11286090	11286090	A	T	SNP	TAS2R30	ENST00000539585	human	ensembl	74_37	-1	known	missense	c.754	p.F252I	0.000	pfam_TAS2_rcpt	pfam_TAS2_rcpt	-	no_errors	TAS2R30	HGNC	ENSG00000256188	tier1	-	-	156	0	0.00	105	32	23.36
TAS2R30	0	genome.wustl.edu	37	12	11286090	11286090	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	11286090	11286090	A	T	SNP	TAS2R30	ENST00000539585	human	ensembl	74_37	-1	known	missense	c.754	p.F252I	0.000	pfam_TAS2_rcpt	pfam_TAS2_rcpt	-	no_errors	TAS2R30	HGNC	ENSG00000256188	tier1	-	-	182	0	0.00	105	32	23.36
TAS2R46	0	genome.wustl.edu	37	12	11214685	11214685	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	11214685	11214685	T	G	SNP	TAS2R46	ENST00000533467	human	ensembl	74_37	-1	known	missense	c.209	p.E70A	0.000	pfam_TAS2_rcpt	pfam_TAS2_rcpt	-	no_errors	TAS2R46	HGNC	ENSG00000226761	tier1	-	-	73	0	0.00	68	32	32.00
TAS2R46	0	genome.wustl.edu	37	12	11214685	11214685	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	11214685	11214685	T	G	SNP	TAS2R46	ENST00000533467	human	ensembl	74_37	-1	known	missense	c.209	p.E70A	0.000	pfam_TAS2_rcpt	pfam_TAS2_rcpt	-	no_errors	TAS2R46	HGNC	ENSG00000226761	tier1	-	-	96	0	0.00	68	32	32.00
TATDN1	0	genome.wustl.edu	37	8	125531026	125531027	+	Frame_Shift_Ins	INS	-	-	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	125531026	125531027	-	T	INS	TATDN1	ENST00000520938	human	ensembl	74_37	-1	known	frame_shift_ins	c.187_186	p.*62fs	0.019:0.004	NULL	NULL	-	no_errors	TATDN1	HGNC	ENSG00000147687	tier1			20	0	0.00	22	4	15.38
TBC1D2B	0	genome.wustl.edu	37	15	78317636	78317636	+	Silent	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	78317636	78317636	G	A	SNP	TBC1D2B	ENST00000300584	human	ensembl	74_37	-1	known	silent	c.1051	p.L351	1.000	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,superfamily_Prefoldin,smart_Pleckstrin_homology,smart_Rab-GTPase-TBC_dom,pfscan_Pleckstrin_homology,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D2B	HGNC	ENSG00000167202	tier1	-	-	79	0	0.00	33	5	13.16
TBC1D2B	0	genome.wustl.edu	37	15	78317636	78317636	+	Silent	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	78317636	78317636	G	A	SNP	TBC1D2B	ENST00000300584	human	ensembl	74_37	-1	known	silent	c.1051	p.L351	1.000	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,superfamily_Prefoldin,smart_Pleckstrin_homology,smart_Rab-GTPase-TBC_dom,pfscan_Pleckstrin_homology,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D2B	HGNC	ENSG00000167202	tier1	-	-	89	0	0.00	33	5	13.16
TBC1D9	0	genome.wustl.edu	37	4	141583207	141583207	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	141583207	141583207	T	A	SNP	TBC1D9	ENST00000442267	human	ensembl	74_37	-1	known	missense	c.1643	p.K548M	1.000	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,pfam_GRAM,superfamily_Rab-GTPase-TBC_dom,smart_GRAM,smart_Rab-GTPase-TBC_dom,pfscan_EF_hand_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D9	HGNC	ENSG00000109436	tier1	-	-	130	0	0.00	74	9	10.84
TBC1D9	0	genome.wustl.edu	37	4	141583207	141583207	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	141583207	141583207	T	A	SNP	TBC1D9	ENST00000442267	human	ensembl	74_37	-1	known	missense	c.1643	p.K548M	1.000	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,pfam_GRAM,superfamily_Rab-GTPase-TBC_dom,smart_GRAM,smart_Rab-GTPase-TBC_dom,pfscan_EF_hand_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D9	HGNC	ENSG00000109436	tier1	-	-	81	0	0.00	74	9	10.84
TBX22	0	genome.wustl.edu	37	X	79286419	79286419	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	79286419	79286419	T	C	SNP	TBX22	ENST00000373294	human	ensembl	74_37	+1	known	missense	c.1372	p.S458P	0.023	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBX22	HGNC	ENSG00000122145	tier1	-	-	17	0	0.00	12	15	55.56
TBX22	0	genome.wustl.edu	37	X	79286419	79286419	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	79286419	79286419	T	C	SNP	TBX22	ENST00000373294	human	ensembl	74_37	+1	known	missense	c.1372	p.S458P	0.023	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBX22	HGNC	ENSG00000122145	tier1	-	-	39	0	0.00	12	15	55.56
TBX5	0	genome.wustl.edu	37	12	114836398	114836398	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	114836398	114836398	G	C	SNP	TBX5	ENST00000310346	human	ensembl	74_37	-1	known	missense	c.490	p.H164D	1.000	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBX5	HGNC	ENSG00000089225	tier1	-	-	110	0	0.00	79	9	10.23
TBX5	0	genome.wustl.edu	37	12	114836398	114836398	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	114836398	114836398	G	C	SNP	TBX5	ENST00000310346	human	ensembl	74_37	-1	known	missense	c.490	p.H164D	1.000	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBX5	HGNC	ENSG00000089225	tier1	-	-	87	0	0.00	79	9	10.23
TDRD7	0	genome.wustl.edu	37	9	100234625	100234625	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	100234625	100234625	T	C	SNP	TDRD7	ENST00000355295	human	ensembl	74_37	+1	known	silent	c.1792	p.L598	0.024	NULL	pfam_Tudor,smart_Tudor,pfscan_Tudor	-	no_errors	TDRD7	HGNC	ENSG00000196116	tier1	-	-	62	0	0.00	69	20	22.47
TDRD7	0	genome.wustl.edu	37	9	100234625	100234625	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	100234625	100234625	T	C	SNP	TDRD7	ENST00000355295	human	ensembl	74_37	+1	known	silent	c.1792	p.L598	0.024	NULL	pfam_Tudor,smart_Tudor,pfscan_Tudor	-	no_errors	TDRD7	HGNC	ENSG00000196116	tier1	-	-	86	0	0.00	69	20	22.47
TEKT5	0	genome.wustl.edu	37	16	10721434	10721434	+	RNA	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	10721434	10721434	C	T	SNP	TEKT5	ENST00000574923	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TEKT5	HGNC	ENSG00000153060	tier1	-	-	48	0	0.00	30	17	35.42
TEKT5	0	genome.wustl.edu	37	16	10721434	10721434	+	RNA	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	10721434	10721434	C	T	SNP	TEKT5	ENST00000574923	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TEKT5	HGNC	ENSG00000153060	tier1	-	-	56	0	0.00	30	17	35.42
TENM1	0	genome.wustl.edu	37	X	123657383	123657383	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	123657383	123657383	C	G	SNP	TENM1	ENST00000422452	human	ensembl	74_37	-1	known	missense	c.2864	p.W955S	1.000	superfamily_CarboxyPept-like_regulatory	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD	-	no_errors	TENM1	HGNC	ENSG00000009694	tier1	-	-	54	0	0.00	31	25	44.64
TENM1	0	genome.wustl.edu	37	X	123657383	123657383	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	123657383	123657383	C	G	SNP	TENM1	ENST00000422452	human	ensembl	74_37	-1	known	missense	c.2864	p.W955S	1.000	superfamily_CarboxyPept-like_regulatory	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD	-	no_errors	TENM1	HGNC	ENSG00000009694	tier1	-	-	56	0	0.00	31	25	44.64
TENM3	0	genome.wustl.edu	37	4	183271178	183271178	+	RNA	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	183271178	183271178	T	G	SNP	TENM3	ENST00000513201	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	TENM3	HGNC	ENSG00000218336	tier1	-	-	22	0	0.00	10	4	28.57
TERF2	0	genome.wustl.edu	37	16	69395378	69395378	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	69395378	69395378	T	G	SNP	TERF2	ENST00000254942	human	ensembl	74_37	-1	known	missense	c.1355	p.K452T	1.000	pirsf_Telomere_repeat-bd-1/2	pfam_Telomere_rpt-bd_fac_dimer_dom,pfam_SANT/Myb,superfamily_Telomere_rpt-bd_fac_dimer_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pirsf_Telomere_repeat-bd-1/2,pfscan_Myb-like_dom	-	no_errors	TERF2	HGNC	ENSG00000132604	tier1	-	-	68	0	0.00	57	4	6.56
TERF2	0	genome.wustl.edu	37	16	69395378	69395378	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	69395378	69395378	T	G	SNP	TERF2	ENST00000254942	human	ensembl	74_37	-1	known	missense	c.1355	p.K452T	1.000	pirsf_Telomere_repeat-bd-1/2	pfam_Telomere_rpt-bd_fac_dimer_dom,pfam_SANT/Myb,superfamily_Telomere_rpt-bd_fac_dimer_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pirsf_Telomere_repeat-bd-1/2,pfscan_Myb-like_dom	-	no_errors	TERF2	HGNC	ENSG00000132604	tier1	-	-	74	0	0.00	57	4	6.56
TESPA1	0	genome.wustl.edu	37	12	55357537	55357537	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	55357537	55357537	A	G	SNP	TESPA1	ENST00000316577	human	ensembl	74_37	-1	known	missense	c.644	p.L215P	1.000	NULL	NULL	-	no_errors	TESPA1	HGNC	ENSG00000135426	tier1	-	-	102	0	0.00	57	4	6.56
TESPA1	0	genome.wustl.edu	37	12	55357537	55357537	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	55357537	55357537	A	G	SNP	TESPA1	ENST00000316577	human	ensembl	74_37	-1	known	missense	c.644	p.L215P	1.000	NULL	NULL	-	no_errors	TESPA1	HGNC	ENSG00000135426	tier1	-	-	71	0	0.00	57	4	6.56
TET1	0	genome.wustl.edu	37	10	70446324	70446324	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	70446324	70446324	G	C	SNP	TET1	ENST00000373644	human	ensembl	74_37	+1	known	missense	c.5264	p.G1755A	0.922	NULL	pfam_Znf_CXXC,pfscan_Znf_CXXC	-	no_errors	TET1	HGNC	ENSG00000138336	tier1	-	-	86	0	0.00	70	16	18.60
TET1	0	genome.wustl.edu	37	10	70446325	70446325	+	Silent	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	70446325	70446325	A	G	SNP	TET1	ENST00000373644	human	ensembl	74_37	+1	known	silent	c.5265	p.G1755	0.928	NULL	pfam_Znf_CXXC,pfscan_Znf_CXXC	-	no_errors	TET1	HGNC	ENSG00000138336	tier1	-	-	101	0	0.00	71	16	18.39
TET1	0	genome.wustl.edu	37	10	70446325	70446325	+	Silent	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	70446325	70446325	A	G	SNP	TET1	ENST00000373644	human	ensembl	74_37	+1	known	silent	c.5265	p.G1755	0.928	NULL	pfam_Znf_CXXC,pfscan_Znf_CXXC	-	no_errors	TET1	HGNC	ENSG00000138336	tier1	-	-	86	0	0.00	71	16	18.39
TET1	0	genome.wustl.edu	37	10	70450805	70450805	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	70450805	70450805	C	T	SNP	TET1	ENST00000373644	human	ensembl	74_37	+1	known	missense	c.5645	p.T1882M	0.012	NULL	pfam_Znf_CXXC,pfscan_Znf_CXXC	-	no_errors	TET1	HGNC	ENSG00000138336	tier1	-	-	34	0	0.00	13	13	50.00
TET1	0	genome.wustl.edu	37	10	70450805	70450805	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	70450805	70450805	C	T	SNP	TET1	ENST00000373644	human	ensembl	74_37	+1	known	missense	c.5645	p.T1882M	0.012	NULL	pfam_Znf_CXXC,pfscan_Znf_CXXC	-	no_errors	TET1	HGNC	ENSG00000138336	tier1	-	-	37	0	0.00	13	13	50.00
TEX11	0	genome.wustl.edu	37	X	69902540	69902540	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	69902540	69902540	A	C	SNP	TEX11	ENST00000344304	human	ensembl	74_37	-1	known	missense	c.1185	p.I395M	1.000	pfam_Meiosis_specific_SPO22	pfam_Meiosis_specific_SPO22,smart_TPR_repeat	-	no_errors	TEX11	HGNC	ENSG00000120498	tier1	-	-	62	0	0.00	91	14	13.21
TEX15	0	genome.wustl.edu	37	8	30702827	30702827	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	30702827	30702827	G	T	SNP	TEX15	ENST00000256246	human	ensembl	74_37	-1	known	missense	c.3707	p.S1236Y	0.023	NULL	NULL	-	no_errors	TEX15	HGNC	ENSG00000133863				32	0	0.00	23	2	8.00
TF	0	genome.wustl.edu	37	3	133485146	133485146	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	133485146	133485146	A	C	SNP	TF	ENST00000402696	human	ensembl	74_37	+1	known	missense	c.1355	p.K452T	0.996	pfam_Transferrin_fam,smart_Transferrin_fam,pirsf_Transferrin	pfam_Transferrin_fam,smart_Transferrin_fam,pirsf_Transferrin,prints_Transferrin_fam	-	no_errors	TF	HGNC	ENSG00000091513	tier1	-	-	44	0	0.00	49	4	7.55
TF	0	genome.wustl.edu	37	3	133485146	133485146	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	133485146	133485146	A	C	SNP	TF	ENST00000402696	human	ensembl	74_37	+1	known	missense	c.1355	p.K452T	0.996	pfam_Transferrin_fam,smart_Transferrin_fam,pirsf_Transferrin	pfam_Transferrin_fam,smart_Transferrin_fam,pirsf_Transferrin,prints_Transferrin_fam	-	no_errors	TF	HGNC	ENSG00000091513	tier1	-	-	69	0	0.00	49	4	7.55
TFIP11	0	genome.wustl.edu	37	22	26890888	26890888	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	22	26890888	26890888	G	T	SNP	TFIP11	ENST00000405938	human	ensembl	74_37	-1	known	missense	c.1867	p.L623I	0.319	pfam_GCFC_dom	pfam_GCFC_dom,pfam_TIP_N,pfam_G_patch_dom,smart_G_patch_dom,pfscan_G_patch_dom	-	no_errors	TFIP11	HGNC	ENSG00000100109	tier1	-	-	79	0	0.00	64	4	5.88
TGFB2	0	genome.wustl.edu	37	1	218614815	218614815	+	RNA	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	218614815	218614815	G	C	SNP	TGFB2	ENST00000479322	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	TGFB2	HGNC	ENSG00000092969	tier1	-	-	49	0	0.00	82	8	8.89
TGFB2	0	genome.wustl.edu	37	1	218614815	218614815	+	RNA	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	218614815	218614815	G	C	SNP	TGFB2	ENST00000479322	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	TGFB2	HGNC	ENSG00000092969	tier1	-	-	84	0	0.00	82	8	8.89
THOC2	0	genome.wustl.edu	37	X	122734687	122734687	+	RNA	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	122734687	122734687	A	G	SNP	THOC2	ENST00000492203	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.252	-	-	-	no_errors	THOC2	HGNC	ENSG00000125676	tier1	-	-	37	0	0.00	61	15	19.74
THOC2	0	genome.wustl.edu	37	X	122734687	122734687	+	RNA	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	122734687	122734687	A	G	SNP	THOC2	ENST00000492203	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.252	-	-	-	no_errors	THOC2	HGNC	ENSG00000125676	tier1	-	-	59	0	0.00	61	15	19.74
THSD4	0	genome.wustl.edu	37	15	72040778	72040778	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	72040778	72040778	G	A	SNP	THSD4	ENST00000261862	human	ensembl	74_37	+1	known	missense	c.2260	p.V754M	0.824	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD4	HGNC	ENSG00000187720	tier1	-	-	108	0	0.00	76	8	9.52
THSD4	0	genome.wustl.edu	37	15	72040778	72040778	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	72040778	72040778	G	A	SNP	THSD4	ENST00000261862	human	ensembl	74_37	+1	known	missense	c.2260	p.V754M	0.824	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD4	HGNC	ENSG00000187720	tier1	-	-	137	0	0.00	76	8	9.52
TIAM1	0	genome.wustl.edu	37	21	32503209	32503209	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	21	32503209	32503209	A	C	SNP	TIAM1	ENST00000286827	human	ensembl	74_37	-1	known	missense	c.3941	p.L1314R	1.000	smart_Pleckstrin_homology	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Raf-like_ras-bd,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,smart_Pleckstrin_homology,smart_Raf-like_ras-bd,smart_PDZ,smart_DH-domain,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_Raf-like_ras-bd,pfscan_DH-domain	-	no_errors	TIAM1	HGNC	ENSG00000156299	tier1	-	-	48	0	0.00	38	29	43.28
TIAM1	0	genome.wustl.edu	37	21	32503209	32503209	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	21	32503209	32503209	A	C	SNP	TIAM1	ENST00000286827	human	ensembl	74_37	-1	known	missense	c.3941	p.L1314R	1.000	smart_Pleckstrin_homology	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Raf-like_ras-bd,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,smart_Pleckstrin_homology,smart_Raf-like_ras-bd,smart_PDZ,smart_DH-domain,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_Raf-like_ras-bd,pfscan_DH-domain	-	no_errors	TIAM1	HGNC	ENSG00000156299	tier1	-	-	80	0	0.00	38	29	43.28
TIGD3	0	genome.wustl.edu	37	11	65123463	65123463	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	65123463	65123463	G	A	SNP	TIGD3	ENST00000309880	human	ensembl	74_37	+1	known	missense	c.184	p.G62S	1.000	superfamily_Homeodomain-like	pfam_HTH_CenpB_DNA-bd_dom,pfam_DDE_SF_endonuclease_CENPB-like,pfam_HTH_Psq,superfamily_Homeodomain-like,smart_HTH_CenpB_DNA-bd_dom,pfscan_HTH_Psq	-	no_errors	TIGD3	HGNC	ENSG00000173825	tier1	rs142471374	-	72	0	0.00	28	8	22.22
TIGD3	0	genome.wustl.edu	37	11	65123463	65123463	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	65123463	65123463	G	A	SNP	TIGD3	ENST00000309880	human	ensembl	74_37	+1	known	missense	c.184	p.G62S	1.000	superfamily_Homeodomain-like	pfam_HTH_CenpB_DNA-bd_dom,pfam_DDE_SF_endonuclease_CENPB-like,pfam_HTH_Psq,superfamily_Homeodomain-like,smart_HTH_CenpB_DNA-bd_dom,pfscan_HTH_Psq	-	no_errors	TIGD3	HGNC	ENSG00000173825	tier1	rs142471374	-	76	0	0.00	28	8	22.22
TJP1	0	genome.wustl.edu	37	15	30065440	30065440	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	30065440	30065440	G	C	SNP	TJP1	ENST00000346128	human	ensembl	74_37	-1	known	missense	c.205	p.L69V	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,pfam_ZU5,pfam_GK/Ca_channel_bsu,pfam_SH3_2,superfamily_PDZ,superfamily_P-loop_NTPase,superfamily_SH3_domain,smart_PDZ,smart_GK/Ca_channel_bsu,smart_ZU5,pfscan_PDZ,pfscan_SH3_domain,pfscan_ZU5,pfscan_Guanylate_kin-like,prints_ZonOcculS1,prints_ZonOcculdens	-	no_errors	TJP1	HGNC	ENSG00000104067	tier1	-	-	66	0	0.00	26	6	18.75
TJP1	0	genome.wustl.edu	37	15	30065440	30065440	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	30065440	30065440	G	C	SNP	TJP1	ENST00000346128	human	ensembl	74_37	-1	known	missense	c.205	p.L69V	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,pfam_ZU5,pfam_GK/Ca_channel_bsu,pfam_SH3_2,superfamily_PDZ,superfamily_P-loop_NTPase,superfamily_SH3_domain,smart_PDZ,smart_GK/Ca_channel_bsu,smart_ZU5,pfscan_PDZ,pfscan_SH3_domain,pfscan_ZU5,pfscan_Guanylate_kin-like,prints_ZonOcculS1,prints_ZonOcculdens	-	no_errors	TJP1	HGNC	ENSG00000104067	tier1	-	-	75	0	0.00	26	6	18.75
TMEM200A	0	genome.wustl.edu	37	6	130761774	130761774	+	Silent	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	130761774	130761774	G	T	SNP	TMEM200A	ENST00000296978	human	ensembl	74_37	+1	known	silent	c.207	p.V69	0.880	pfam_DUF2371_TMEM200	pfam_DUF2371_TMEM200	-	no_errors	TMEM200A	HGNC	ENSG00000164484	tier1	-	-	71	0	0.00	54	4	6.90
TMEM200A	0	genome.wustl.edu	37	6	130761774	130761774	+	Silent	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	130761774	130761774	G	T	SNP	TMEM200A	ENST00000296978	human	ensembl	74_37	+1	known	silent	c.207	p.V69	0.880	pfam_DUF2371_TMEM200	pfam_DUF2371_TMEM200	-	no_errors	TMEM200A	HGNC	ENSG00000164484	tier1	-	-	74	0	0.00	54	4	6.90
TMEM86B	0	genome.wustl.edu	37	19	55738621	55738621	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	55738621	55738621	C	G	SNP	TMEM86B	ENST00000327042	human	ensembl	74_37	-1	known	missense	c.609	p.M203I	1.000	pfam_YhhN	pfam_YhhN	-	no_errors	TMEM86B	HGNC	ENSG00000180089	tier1	-	-	85	0	0.00	29	37	56.06
TMEM86B	0	genome.wustl.edu	37	19	55738621	55738621	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	55738621	55738621	C	G	SNP	TMEM86B	ENST00000327042	human	ensembl	74_37	-1	known	missense	c.609	p.M203I	1.000	pfam_YhhN	pfam_YhhN	-	no_errors	TMEM86B	HGNC	ENSG00000180089	tier1	-	-	86	0	0.00	29	37	56.06
TMLHE	0	genome.wustl.edu	37	X	154736754	154736754	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	154736754	154736754	C	A	SNP	TMLHE	ENST00000334398	human	ensembl	74_37	-1	known	missense	c.800	p.G267V	1.000	pfam_Taurine_dOase,tigrfam_Trimethyllysine_dOase	pfam_Taurine_dOase,pfam_DUF971,tigrfam_Trimethyllysine_dOase	-	no_errors	TMLHE	HGNC	ENSG00000185973	tier1	-	-	38	0	0.00	52	4	7.14
TMLHE	0	genome.wustl.edu	37	X	154736754	154736754	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	154736754	154736754	C	A	SNP	TMLHE	ENST00000334398	human	ensembl	74_37	-1	known	missense	c.800	p.G267V	1.000	pfam_Taurine_dOase,tigrfam_Trimethyllysine_dOase	pfam_Taurine_dOase,pfam_DUF971,tigrfam_Trimethyllysine_dOase	-	no_errors	TMLHE	HGNC	ENSG00000185973	tier1	-	-	44	0	0.00	52	4	7.14
TNFAIP1	0	genome.wustl.edu	37	17	26667392	26667392	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	26667392	26667392	G	C	SNP	TNFAIP1	ENST00000226225	human	ensembl	74_37	+1	known	missense	c.263	p.R88P	1.000	pfam_T1-type_BTB,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_T1-type_BTB,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	TNFAIP1	HGNC	ENSG00000109079	tier1	-	-	68	0	0.00	66	16	19.51
TNFAIP1	0	genome.wustl.edu	37	17	26667392	26667392	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	26667392	26667392	G	C	SNP	TNFAIP1	ENST00000226225	human	ensembl	74_37	+1	known	missense	c.263	p.R88P	1.000	pfam_T1-type_BTB,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_T1-type_BTB,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	TNFAIP1	HGNC	ENSG00000109079	tier1	-	-	89	0	0.00	66	16	19.51
TNK2	0	genome.wustl.edu	37	3	195594074	195594074	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	195594074	195594074	C	A	SNP	TNK2	ENST00000333602	human	ensembl	74_37	-1	known	missense	c.2948	p.G983V	0.921	superfamily_UBA-like	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Cdc42_binding_dom_like,pfam_Inhibitor_Mig-6,superfamily_Kinase-like_dom,superfamily_SH3_domain,superfamily_SAM/pointed,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SH3_domain,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TNK2	HGNC	ENSG00000061938	tier1	-	-	59	0	0.00	47	15	24.19
TNK2	0	genome.wustl.edu	37	3	195594074	195594074	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	195594074	195594074	C	A	SNP	TNK2	ENST00000333602	human	ensembl	74_37	-1	known	missense	c.2948	p.G983V	0.921	superfamily_UBA-like	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Cdc42_binding_dom_like,pfam_Inhibitor_Mig-6,superfamily_Kinase-like_dom,superfamily_SH3_domain,superfamily_SAM/pointed,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SH3_domain,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TNK2	HGNC	ENSG00000061938	tier1	-	-	75	0	0.00	47	15	24.19
TP53	0	genome.wustl.edu	37	17	7577099	7577099	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	7577099	7577099	C	T	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.839	p.R280K	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	45	0	0.00	7	18	72.00
TP53	0	genome.wustl.edu	37	17	7577099	7577099	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	7577099	7577099	C	T	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.839	p.R280K	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	52	0	0.00	7	18	72.00
TRAF4	0	genome.wustl.edu	37	17	27071173	27071173	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	27071173	27071173	C	G	SNP	TRAF4	ENST00000262395	human	ensembl	74_37	+1	known	missense	c.43	p.R15G	1.000	pirsf_TNF_rcpt--assoc_TRAF	pfam_MATH,pfam_Znf_C3HC4_RING-type,superfamily_TRAF-like,smart_Znf_RING,smart_MATH,pirsf_TNF_rcpt--assoc_TRAF,pfscan_MATH,pfscan_Znf_RING,pfscan_Znf_TRAF	-	no_errors	TRAF4	HGNC	ENSG00000076604	tier1	-	-	23	0	0.00	13	5	27.78
TRAF4	0	genome.wustl.edu	37	17	27071173	27071173	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	27071173	27071173	C	G	SNP	TRAF4	ENST00000262395	human	ensembl	74_37	+1	known	missense	c.43	p.R15G	1.000	pirsf_TNF_rcpt--assoc_TRAF	pfam_MATH,pfam_Znf_C3HC4_RING-type,superfamily_TRAF-like,smart_Znf_RING,smart_MATH,pirsf_TNF_rcpt--assoc_TRAF,pfscan_MATH,pfscan_Znf_RING,pfscan_Znf_TRAF	-	no_errors	TRAF4	HGNC	ENSG00000076604	tier1	-	-	25	0	0.00	13	5	27.78
TRERF1	0	genome.wustl.edu	37	6	42237087	42237087	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	42237087	42237087	C	G	SNP	TRERF1	ENST00000541110	human	ensembl	74_37	-1	known	missense	c.242	p.R81T	0.995	NULL	pfam_ELM2_dom,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_SANT/Myb,pfscan_ELM2_dom,pfscan_Znf_C2H2	-	no_errors	TRERF1	HGNC	ENSG00000124496	tier1	-	-	73	0	0.00	51	6	10.53
TRERF1	0	genome.wustl.edu	37	6	42237087	42237087	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	42237087	42237087	C	G	SNP	TRERF1	ENST00000541110	human	ensembl	74_37	-1	known	missense	c.242	p.R81T	0.995	NULL	pfam_ELM2_dom,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_SANT/Myb,pfscan_ELM2_dom,pfscan_Znf_C2H2	-	no_errors	TRERF1	HGNC	ENSG00000124496	tier1	-	-	74	0	0.00	51	6	10.53
TRHDE	0	genome.wustl.edu	37	12	73056836	73056836	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	73056836	73056836	A	T	SNP	TRHDE	ENST00000261180	human	ensembl	74_37	+1	known	missense	c.2936	p.K979M	1.000	NULL	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	TRHDE	HGNC	ENSG00000072657	tier1	-	-	55	0	0.00	42	10	19.23
TRHDE	0	genome.wustl.edu	37	12	73056836	73056836	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	73056836	73056836	A	T	SNP	TRHDE	ENST00000261180	human	ensembl	74_37	+1	known	missense	c.2936	p.K979M	1.000	NULL	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	TRHDE	HGNC	ENSG00000072657	tier1	-	-	61	0	0.00	42	10	19.23
TRIB3	0	genome.wustl.edu	37	20	377156	377156	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	20	377156	377156	C	T	SNP	TRIB3	ENST00000422053	human	ensembl	74_37	+1	known	missense	c.980	p.P327L	1.000	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	-	no_errors	TRIB3	HGNC	ENSG00000101255	tier1	-	-	33	0	0.00	27	10	27.03
TRIB3	0	genome.wustl.edu	37	20	377156	377156	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	20	377156	377156	C	T	SNP	TRIB3	ENST00000422053	human	ensembl	74_37	+1	known	missense	c.980	p.P327L	1.000	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	-	no_errors	TRIB3	HGNC	ENSG00000101255	tier1	-	-	58	0	0.00	27	10	27.03
TRMT11	0	genome.wustl.edu	37	6	126332443	126332443	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	126332443	126332443	A	C	SNP	TRMT11	ENST00000334379	human	ensembl	74_37	+1	known	missense	c.805	p.N269H	1.000	pfam_RNA_methylase_dom,pirsf_tRNA_mtfrase_TRM11	pfam_RNA_methylase_dom,pirsf_tRNA_mtfrase_TRM11,prints_N12N6_MeTrfase	-	no_errors	TRMT11	HGNC	ENSG00000066651	tier1	-	-	106	0	0.00	89	15	14.42
TRMT11	0	genome.wustl.edu	37	6	126332443	126332443	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	126332443	126332443	A	C	SNP	TRMT11	ENST00000334379	human	ensembl	74_37	+1	known	missense	c.805	p.N269H	1.000	pfam_RNA_methylase_dom,pirsf_tRNA_mtfrase_TRM11	pfam_RNA_methylase_dom,pirsf_tRNA_mtfrase_TRM11,prints_N12N6_MeTrfase	-	no_errors	TRMT11	HGNC	ENSG00000066651	tier1	-	-	132	0	0.00	89	15	14.42
TRPA1	0	genome.wustl.edu	37	8	72964920	72964920	+	Silent	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	72964920	72964920	G	C	SNP	TRPA1	ENST00000262209	human	ensembl	74_37	-1	known	silent	c.1725	p.V575	0.682	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_Ion_trans_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	TRPA1	HGNC	ENSG00000104321	tier1	-	-	64	0	0.00	54	17	23.94
TRPA1	0	genome.wustl.edu	37	8	72964920	72964920	+	Silent	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	72964920	72964920	G	C	SNP	TRPA1	ENST00000262209	human	ensembl	74_37	-1	known	silent	c.1725	p.V575	0.682	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_Ion_trans_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	TRPA1	HGNC	ENSG00000104321	tier1	-	-	77	0	0.00	54	17	23.94
TRPC7	0	genome.wustl.edu	37	5	135692654	135692654	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	135692654	135692654	G	A	SNP	TRPC7	ENST00000513104	human	ensembl	74_37	-1	known	missense	c.422	p.P141L	1.000	superfamily_Ankyrin_rpt-contain_dom,tigrfam_TRP_channel	pfam_Ion_trans_dom,pfam_TRP_dom,pfam_PKD1_2_channel,superfamily_Ankyrin_rpt-contain_dom,superfamily_ARM-type_fold,smart_Ankyrin_rpt,prints_TRPC7_channel,prints_TRPC_channel,tigrfam_TRP_channel	-	no_errors	TRPC7	HGNC	ENSG00000069018	tier1	-	-	16	0	0.00	4	4	50.00
TRPC7	0	genome.wustl.edu	37	5	135692654	135692654	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	135692654	135692654	G	A	SNP	TRPC7	ENST00000513104	human	ensembl	74_37	-1	known	missense	c.422	p.P141L	1.000	superfamily_Ankyrin_rpt-contain_dom,tigrfam_TRP_channel	pfam_Ion_trans_dom,pfam_TRP_dom,pfam_PKD1_2_channel,superfamily_Ankyrin_rpt-contain_dom,superfamily_ARM-type_fold,smart_Ankyrin_rpt,prints_TRPC7_channel,prints_TRPC_channel,tigrfam_TRP_channel	-	no_errors	TRPC7	HGNC	ENSG00000069018	tier1	-	-	21	0	0.00	4	4	50.00
TRPM1	0	genome.wustl.edu	37	15	31355402	31355402	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	15	31355402	31355402	G	T	SNP	TRPM1	ENST00000542188	human	ensembl	74_37	-1	known	missense	c.935	p.P312H	1.000	NULL	pfam_Ion_trans_dom	-	no_errors	TRPM1	HGNC	ENSG00000134160	tier1	-	-	77	0	0.00	49	4	7.55
TRPM2	0	genome.wustl.edu	37	21	45833815	45833815	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	21	45833815	45833815	G	A	SNP	TRPM2	ENST00000300482	human	ensembl	74_37	+1	known	missense	c.3004	p.D1002N	0.971	pfam_Ion_trans_dom	pfam_Ion_trans_dom,superfamily_NUDIX_hydrolase_dom-like	-	no_errors	TRPM2	HGNC	ENSG00000142185				68	0	0.00	38	2	5.00
TSPAN6	0	genome.wustl.edu	37	X	99891563	99891563	+	RNA	DEL	G	G	-			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	99891563	99891563	G	-	DEL	TSPAN6	ENST00000496771	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	TSPAN6	HGNC	ENSG00000000003	tier1			100	0	0.00	76	12	13.64
TSSC1	0	genome.wustl.edu	37	2	3212447	3212447	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	3212447	3212447	C	G	SNP	TSSC1	ENST00000443925	human	ensembl	74_37	-1	putative	missense	c.798	p.L266F	0.005	NULL	superfamily_WD40_repeat_dom	-	no_errors	TSSC1	HGNC	ENSG00000032389	tier1	-	-	76	0	0.00	57	6	9.52
TTC21B	0	genome.wustl.edu	37	2	166781103	166781103	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	166781103	166781103	A	G	SNP	TTC21B	ENST00000243344	human	ensembl	74_37	-1	known	missense	c.1472	p.L491P	1.000	NULL	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC21B	HGNC	ENSG00000123607	tier1	-	-	121	0	0.00	67	6	8.22
TTC21B	0	genome.wustl.edu	37	2	166781103	166781103	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	166781103	166781103	A	G	SNP	TTC21B	ENST00000243344	human	ensembl	74_37	-1	known	missense	c.1472	p.L491P	1.000	NULL	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC21B	HGNC	ENSG00000123607	tier1	-	-	68	0	0.00	67	6	8.22
TTC23L	0	genome.wustl.edu	37	5	34839360	34839360	+	RNA	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	34839360	34839360	C	A	SNP	TTC23L	ENST00000514080	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TTC23L	HGNC	ENSG00000205838	tier1	-	-	38	0	0.00	32	9	21.95
TTC23L	0	genome.wustl.edu	37	5	34839360	34839360	+	RNA	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	34839360	34839360	C	A	SNP	TTC23L	ENST00000514080	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TTC23L	HGNC	ENSG00000205838	tier1	-	-	53	0	0.00	32	9	21.95
TTN	0	genome.wustl.edu	37	2	179439225	179439225	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	179439225	179439225	T	G	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.63930	p.K21310N	0.998	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	37	0	0.00	40	7	14.89
TTN	0	genome.wustl.edu	37	2	179439225	179439225	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	179439225	179439225	T	G	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.63930	p.K21310N	0.998	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	54	0	0.00	40	7	14.89
TTN	0	genome.wustl.edu	37	2	179606379	179606379	+	Frame_Shift_Del	DEL	T	T	-			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	179606379	179606379	T	-	DEL	TTN	ENST00000342175	human	ensembl	74_37	-1	known	frame_shift_del	c.11068	p.T3690fs	1.000	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1			48	0	0.00	23	23	50.00
TTN	0	genome.wustl.edu	37	2	179606379	179606379	+	Frame_Shift_Del	DEL	T	T	-			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	179606379	179606379	T	-	DEL	TTN	ENST00000342175	human	ensembl	74_37	-1	known	frame_shift_del	c.11068	p.T3690fs	1.000	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1			57	0	0.00	23	23	50.00
TTN	0	genome.wustl.edu	37	2	179583986	179583986	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	179583986	179583986	A	C	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.20399	p.L6800R	0.851	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				83	0	0.00	30	2	6.25
TULP4	0	genome.wustl.edu	37	6	158923470	158923470	+	Silent	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	158923470	158923470	G	A	SNP	TULP4	ENST00000367097	human	ensembl	74_37	+1	known	silent	c.2775	p.L925	1.000	NULL	pfam_Tubby_C,pfam_SOCS_C,pfam_WD40_repeat,superfamily_Tubby_C-like,superfamily_WD40_repeat_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_WD40_repeat,smart_SOCS_C,pfscan_SOCS_C,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	TULP4	HGNC	ENSG00000130338	tier1	-	-	104	0	0.00	35	25	41.67
TULP4	0	genome.wustl.edu	37	6	158923470	158923470	+	Silent	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	158923470	158923470	G	A	SNP	TULP4	ENST00000367097	human	ensembl	74_37	+1	known	silent	c.2775	p.L925	1.000	NULL	pfam_Tubby_C,pfam_SOCS_C,pfam_WD40_repeat,superfamily_Tubby_C-like,superfamily_WD40_repeat_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_WD40_repeat,smart_SOCS_C,pfscan_SOCS_C,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	TULP4	HGNC	ENSG00000130338	tier1	-	-	108	0	0.00	35	25	41.67
UBAC2	0	genome.wustl.edu	37	13	99970286	99970286	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	13	99970286	99970286	C	G	SNP	UBAC2	ENST00000376440	human	ensembl	74_37	+1	known	missense	c.419	p.S140C	1.000	NULL	pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	UBAC2	HGNC	ENSG00000134882	tier1	-	-	52	0	0.00	29	19	39.58
UBAC2	0	genome.wustl.edu	37	13	99970286	99970286	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	13	99970286	99970286	C	G	SNP	UBAC2	ENST00000376440	human	ensembl	74_37	+1	known	missense	c.419	p.S140C	1.000	NULL	pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	UBAC2	HGNC	ENSG00000134882	tier1	-	-	83	0	0.00	29	19	39.58
UBQLNL	0	genome.wustl.edu	37	11	5537370	5537370	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	5537370	5537370	T	G	SNP	UBQLNL	ENST00000380184	human	ensembl	74_37	-1	putative	missense	c.302	p.K101T	1.000	pfam_Ubiquitin_dom,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	pfam_Ubiquitin_dom,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	-	no_errors	UBQLNL	HGNC	ENSG00000175518	tier1	-	-	30	0	0.00	16	8	33.33
UBQLNL	0	genome.wustl.edu	37	11	5537370	5537370	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	5537370	5537370	T	G	SNP	UBQLNL	ENST00000380184	human	ensembl	74_37	-1	putative	missense	c.302	p.K101T	1.000	pfam_Ubiquitin_dom,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	pfam_Ubiquitin_dom,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	-	no_errors	UBQLNL	HGNC	ENSG00000175518	tier1	-	-	32	0	0.00	16	8	33.33
UCN2	0	genome.wustl.edu	37	3	48600362	48600362	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	48600362	48600362	G	T	SNP	UCN2	ENST00000273610	human	ensembl	74_37	-1	known	missense	c.196	p.R66S	0.000	NULL	pfam_Urocortin_II/III	-	no_errors	UCN2	HGNC	ENSG00000145040				47	0	0.00	27	2	6.90
UGT3A2	0	genome.wustl.edu	37	5	36051985	36051985	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	36051985	36051985	T	A	SNP	UGT3A2	ENST00000282507	human	ensembl	74_37	-1	known	missense	c.298	p.T100S	0.001	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT3A2	HGNC	ENSG00000168671	tier1	-	-	169	0	0.00	86	17	16.50
UGT3A2	0	genome.wustl.edu	37	5	36051985	36051985	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	36051985	36051985	T	A	SNP	UGT3A2	ENST00000282507	human	ensembl	74_37	-1	known	missense	c.298	p.T100S	0.001	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT3A2	HGNC	ENSG00000168671	tier1	-	-	84	0	0.00	86	17	16.50
UMOD	0	genome.wustl.edu	37	16	20360192	20360192	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	20360192	20360192	T	C	SNP	UMOD	ENST00000424589	human	ensembl	74_37	-1	known	missense	c.530	p.D177G	0.996	pfam_EGF-like_Ca-bd_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_ZP_dom,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_ZP_dom,pfscan_EG-like_dom,pfscan_ZP_dom,prints_ZP_dom	-	no_errors	UMOD	HGNC	ENSG00000169344	tier1	-	-	76	0	0.00	47	5	9.62
UNC13A	0	genome.wustl.edu	37	19	17780382	17780382	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	17780382	17780382	G	T	SNP	UNC13A	ENST00000428389	human	ensembl	74_37	-1	known	missense	c.638	p.T213K	1.000	superfamily_C2_dom	pfam_Munc13_subgr_dom-2,pfam_C2_dom,pfam_Ca-dep_secretion_activator,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_C2_dom,smart_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_C2_dom	-	no_errors	UNC13A	HGNC	ENSG00000130477				59	0	0.00	36	2	5.26
USH2A	0	genome.wustl.edu	37	1	216074201	216074201	+	Silent	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	216074201	216074201	G	T	SNP	USH2A	ENST00000366943	human	ensembl	74_37	-1	known	silent	c.7347	p.T2449	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781	tier1	-	-	59	0	0.00	48	24	33.33
USH2A	0	genome.wustl.edu	37	1	216074201	216074201	+	Silent	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	216074201	216074201	G	T	SNP	USH2A	ENST00000366943	human	ensembl	74_37	-1	known	silent	c.7347	p.T2449	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781	tier1	-	-	71	0	0.00	48	24	33.33
USH2A	0	genome.wustl.edu	37	1	216373122	216373122	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	216373122	216373122	C	G	SNP	USH2A	ENST00000366943	human	ensembl	74_37	-1	known	missense	c.3658	p.V1220L	0.999	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781	tier1	-	-	101	0	0.00	63	9	12.50
USH2A	0	genome.wustl.edu	37	1	216373122	216373122	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	216373122	216373122	C	G	SNP	USH2A	ENST00000366943	human	ensembl	74_37	-1	known	missense	c.3658	p.V1220L	0.999	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781	tier1	-	-	54	0	0.00	63	9	12.50
USP17L2	0	genome.wustl.edu	37	8	11996188	11996188	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	11996188	11996188	C	T	SNP	USP17L2	ENST00000333796	human	ensembl	74_37	-1	known	missense	c.82	p.A28T	0.028	NULL	pfam_Peptidase_C19/C67,pfam_HABP4_PAIRBP1-bd,pfscan_Peptidase_C19/C67	-	no_errors	USP17L2	HGNC	ENSG00000223443				216	0	0.00	114	8	6.56
USP46	0	genome.wustl.edu	37	4	53470744	53470744	+	Silent	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	53470744	53470744	G	A	SNP	USP46	ENST00000441222	human	ensembl	74_37	-1	known	silent	c.645	p.F215	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP46	HGNC	ENSG00000109189	tier1	-	-	122	0	0.00	59	21	26.25
USP46	0	genome.wustl.edu	37	4	53470744	53470744	+	Silent	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	53470744	53470744	G	A	SNP	USP46	ENST00000441222	human	ensembl	74_37	-1	known	silent	c.645	p.F215	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP46	HGNC	ENSG00000109189	tier1	-	-	74	0	0.00	59	21	26.25
USP54	0	genome.wustl.edu	37	10	75294426	75294426	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	75294426	75294426	G	T	SNP	USP54	ENST00000339859	human	ensembl	74_37	-1	known	missense	c.1247	p.S416Y	1.000	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP54	HGNC	ENSG00000166348	tier1	-	-	89	0	0.00	71	4	5.33
VAPB	0	genome.wustl.edu	37	20	57020741	57020744	+	RNA	DEL	TGTG	TGTG	-			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	TGTG	TGTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	20	57020741	57020744	TGTG	-	DEL	VAPB	ENST00000265619	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.001:0.000:0.000	-	-	-	no_errors	VAPB	HGNC	ENSG00000124164	tier1			20	0	0.00	34	4	10.53
VASH1	0	genome.wustl.edu	37	14	77236248	77236248	+	RNA	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	77236248	77236248	G	A	SNP	VASH1	ENST00000556038	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	VASH1	HGNC	ENSG00000071246	tier1	-	-	48	0	0.00	36	11	23.40
VASH1	0	genome.wustl.edu	37	14	77236248	77236248	+	RNA	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	77236248	77236248	G	A	SNP	VASH1	ENST00000556038	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	VASH1	HGNC	ENSG00000071246	tier1	-	-	78	0	0.00	36	11	23.40
VAV2	0	genome.wustl.edu	37	9	136662837	136662837	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	136662837	136662837	C	T	SNP	VAV2	ENST00000371850	human	ensembl	74_37	-1	known	missense	c.931	p.V311I	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_SH3_2,pfam_CAMSAP_CH,pfam_SH3_domain,pfam_SH2,pfam_CH-domain,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_CH-domain,superfamily_SH3_domain,smart_CH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_SH3_domain,smart_SH2,pfscan_CH-domain,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain,prints_SH2,prints_SH3_domain	-	no_errors	VAV2	HGNC	ENSG00000160293	tier1	-	-	50	0	0.00	21	9	30.00
VAV2	0	genome.wustl.edu	37	9	136662837	136662837	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	9	136662837	136662837	C	T	SNP	VAV2	ENST00000371850	human	ensembl	74_37	-1	known	missense	c.931	p.V311I	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_SH3_2,pfam_CAMSAP_CH,pfam_SH3_domain,pfam_SH2,pfam_CH-domain,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_CH-domain,superfamily_SH3_domain,smart_CH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_SH3_domain,smart_SH2,pfscan_CH-domain,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain,prints_SH2,prints_SH3_domain	-	no_errors	VAV2	HGNC	ENSG00000160293	tier1	-	-	51	0	0.00	21	9	30.00
VPS13D	0	genome.wustl.edu	37	1	12567015	12567015	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	12567015	12567015	A	T	SNP	VPS13D	ENST00000358136	human	ensembl	74_37	+1	known	missense	c.12903	p.E4301D	0.996	NULL	pfam_VPSAP_dom,pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	VPS13D	HGNC	ENSG00000048707	tier1	-	-	60	0	0.00	43	13	23.21
VPS13D	0	genome.wustl.edu	37	1	12567015	12567015	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	12567015	12567015	A	T	SNP	VPS13D	ENST00000358136	human	ensembl	74_37	+1	known	missense	c.12903	p.E4301D	0.996	NULL	pfam_VPSAP_dom,pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	VPS13D	HGNC	ENSG00000048707	tier1	-	-	94	0	0.00	43	13	23.21
VPS16	0	genome.wustl.edu	37	20	2845630	2845630	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	20	2845630	2845630	G	T	SNP	VPS16	ENST00000380445	human	ensembl	74_37	+1	known	nonsense	c.1933	p.E645*	0.999	pfam_Vps16_C,pirsf_VPS16	pfam_Vps16_N,pfam_Vps16_C,pirsf_VPS16	-	no_errors	VPS16	HGNC	ENSG00000215305	tier1	-	-	81	0	0.00	48	4	7.69
VPS16	0	genome.wustl.edu	37	20	2845630	2845630	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	20	2845630	2845630	G	T	SNP	VPS16	ENST00000380445	human	ensembl	74_37	+1	known	nonsense	c.1933	p.E645*	0.999	pfam_Vps16_C,pirsf_VPS16	pfam_Vps16_N,pfam_Vps16_C,pirsf_VPS16	-	no_errors	VPS16	HGNC	ENSG00000215305	tier1	-	-	96	0	0.00	48	4	7.69
VPS45	0	genome.wustl.edu	37	1	150040691	150040691	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	150040691	150040691	G	T	SNP	VPS45	ENST00000369130	human	ensembl	74_37	+1	known	missense	c.98	p.G33V	1.000	pfam_Sec1-like,superfamily_Sec1-like	pfam_Sec1-like,superfamily_Sec1-like	-	no_errors	VPS45	HGNC	ENSG00000136631				51	0	0.00	38	2	5.00
VTA1	0	genome.wustl.edu	37	6	142525124	142525124	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	142525124	142525124	G	T	SNP	VTA1	ENST00000367630	human	ensembl	74_37	+1	known	missense	c.700	p.V234L	1.000	NULL	NULL	-	no_errors	VTA1	HGNC	ENSG00000009844	tier1	-	-	111	0	0.00	75	5	6.25
VTA1	0	genome.wustl.edu	37	6	142525124	142525124	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	142525124	142525124	G	T	SNP	VTA1	ENST00000367630	human	ensembl	74_37	+1	known	missense	c.700	p.V234L	1.000	NULL	NULL	-	no_errors	VTA1	HGNC	ENSG00000009844	tier1	-	-	81	0	0.00	75	5	6.25
VWA5B2	0	genome.wustl.edu	37	3	183957262	183957262	+	Silent	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	183957262	183957262	C	A	SNP	VWA5B2	ENST00000426955	human	ensembl	74_37	+1	known	silent	c.2283	p.G761	0.650	NULL	NULL	-	no_errors	VWA5B2	HGNC	ENSG00000145198	tier1	-	-	47	0	0.00	15	18	54.55
VWA5B2	0	genome.wustl.edu	37	3	183957262	183957262	+	Silent	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	183957262	183957262	C	A	SNP	VWA5B2	ENST00000426955	human	ensembl	74_37	+1	known	silent	c.2283	p.G761	0.650	NULL	NULL	-	no_errors	VWA5B2	HGNC	ENSG00000145198	tier1	-	-	54	0	0.00	15	18	54.55
VWF	0	genome.wustl.edu	37	12	6058967	6058967	+	Silent	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	6058967	6058967	A	G	SNP	VWF	ENST00000261405	human	ensembl	74_37	-1	known	silent	c.8238	p.D2746	1.000	pirsf_VWF,smart_Cys_knot_C,pfscan_Cys_knot_C	pirsf_VWF,pfam_VWF_type-D,pfam_VWF_A,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_VWF_A,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_A,pfscan_VWF_C	-	no_errors	VWF	HGNC	ENSG00000110799	tier1	-	-	31	0	0.00	20	9	31.03
VWF	0	genome.wustl.edu	37	12	6058967	6058967	+	Silent	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	6058967	6058967	A	G	SNP	VWF	ENST00000261405	human	ensembl	74_37	-1	known	silent	c.8238	p.D2746	1.000	pirsf_VWF,smart_Cys_knot_C,pfscan_Cys_knot_C	pirsf_VWF,pfam_VWF_type-D,pfam_VWF_A,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_VWF_A,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_A,pfscan_VWF_C	-	no_errors	VWF	HGNC	ENSG00000110799	tier1	-	-	54	0	0.00	20	9	31.03
WDFY4	0	genome.wustl.edu	37	10	49935692	49935692	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	49935692	49935692	A	T	SNP	WDFY4	ENST00000325239	human	ensembl	74_37	+1	known	missense	c.959	p.K320I	0.999	superfamily_ARM-type_fold	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDFY4	HGNC	ENSG00000128815	tier1	-	-	90	0	0.00	57	19	25.00
WDFY4	0	genome.wustl.edu	37	10	50025347	50025347	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	50025347	50025347	C	T	SNP	WDFY4	ENST00000325239	human	ensembl	74_37	+1	known	nonsense	c.5398	p.Q1800*	1.000	NULL	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDFY4	HGNC	ENSG00000128815				74	0	0.00	52	3	5.45
WDR11	0	genome.wustl.edu	37	10	122660587	122660587	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	122660587	122660587	A	T	SNP	WDR11	ENST00000263461	human	ensembl	74_37	+1	known	missense	c.2664	p.Q888H	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	-	no_errors	WDR11	HGNC	ENSG00000120008	tier1	-	-	106	0	0.00	114	43	27.39
WDR11	0	genome.wustl.edu	37	10	122660587	122660587	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	122660587	122660587	A	T	SNP	WDR11	ENST00000263461	human	ensembl	74_37	+1	known	missense	c.2664	p.Q888H	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	-	no_errors	WDR11	HGNC	ENSG00000120008	tier1	-	-	191	0	0.00	114	43	27.39
WDR19	0	genome.wustl.edu	37	4	39233547	39233547	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	39233547	39233547	G	T	SNP	WDR19	ENST00000399820	human	ensembl	74_37	+1	known	missense	c.2113	p.G705C	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR19	HGNC	ENSG00000157796				167	0	0.00	73	4	5.19
WDR20	0	genome.wustl.edu	37	14	102675425	102675425	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	102675425	102675425	G	T	SNP	WDR20	ENST00000454394	human	ensembl	74_37	+1	known	missense	c.1011	p.W337C	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR20	HGNC	ENSG00000140153				42	0	0.00	21	2	8.70
WDR27	0	genome.wustl.edu	37	6	170067332	170067332	+	RNA	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	170067332	170067332	A	T	SNP	WDR27	ENST00000546525	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	WDR27	HGNC	ENSG00000184465	tier1	-	-	39	0	0.00	34	4	10.53
WDR27	0	genome.wustl.edu	37	6	170067332	170067332	+	RNA	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	170067332	170067332	A	T	SNP	WDR27	ENST00000546525	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	WDR27	HGNC	ENSG00000184465	tier1	-	-	50	0	0.00	34	4	10.53
WDR48	0	genome.wustl.edu	37	3	39111206	39111206	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	39111206	39111206	G	T	SNP	WDR48	ENST00000302313	human	ensembl	74_37	+1	known	missense	c.643	p.A215S	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_DUF3337,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR48	HGNC	ENSG00000114742	tier1	-	-	92	0	0.00	48	4	7.69
WDR52	0	genome.wustl.edu	37	3	113015696	113015696	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	113015696	113015696	T	G	SNP	WDR52	ENST00000393845	human	ensembl	74_37	-1	known	missense	c.5114	p.K1705T	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR52	HGNC	ENSG00000206530	tier1	-	-	52	0	0.00	44	12	21.05
WDR52	0	genome.wustl.edu	37	3	113015696	113015696	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	113015696	113015696	T	G	SNP	WDR52	ENST00000393845	human	ensembl	74_37	-1	known	missense	c.5114	p.K1705T	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR52	HGNC	ENSG00000206530	tier1	-	-	62	0	0.00	44	12	21.05
WDR87	0	genome.wustl.edu	37	19	38378044	38378044	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	38378044	38378044	T	C	SNP	WDR87	ENST00000447313	human	ensembl	74_37	-1	known	silent	c.6267	p.R2089	0.969	superfamily_ARM-type_fold	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,superfamily_Quinolinate_PRibosylTrfase_C,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR87	HGNC	ENSG00000171804				74	0	0.00	35	3	7.89
WNK1	0	genome.wustl.edu	37	12	977760	977760	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	977760	977760	T	C	SNP	WNK1	ENST00000530271	human	ensembl	74_37	+1	known	silent	c.3123	p.T1041	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Kinase_OSR1/WNK_CCT,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	WNK1	HGNC	ENSG00000060237	tier1	-	-	35	0	0.00	27	8	22.86
WNK1	0	genome.wustl.edu	37	12	977760	977760	+	Silent	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	12	977760	977760	T	C	SNP	WNK1	ENST00000530271	human	ensembl	74_37	+1	known	silent	c.3123	p.T1041	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Kinase_OSR1/WNK_CCT,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	WNK1	HGNC	ENSG00000060237	tier1	-	-	52	0	0.00	27	8	22.86
WWC3	0	genome.wustl.edu	37	X	10096087	10096087	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	10096087	10096087	G	C	SNP	WWC3	ENST00000380861	human	ensembl	74_37	+1	known	missense	c.2166	p.W722C	1.000	superfamily_C2_dom	superfamily_C2_dom	-	no_errors	WWC3	HGNC	ENSG00000047644	tier1	-	-	39	0	0.00	21	7	25.00
WWC3	0	genome.wustl.edu	37	X	10096087	10096087	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	10096087	10096087	G	C	SNP	WWC3	ENST00000380861	human	ensembl	74_37	+1	known	missense	c.2166	p.W722C	1.000	superfamily_C2_dom	superfamily_C2_dom	-	no_errors	WWC3	HGNC	ENSG00000047644	tier1	-	-	47	0	0.00	21	7	25.00
XIRP2	0	genome.wustl.edu	37	2	167760191	167760191	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	167760191	167760191	G	T	SNP	XIRP2	ENST00000295237	human	ensembl	74_37	+1	known	missense	c.199	p.G67W	0.000	NULL	pfam_Actin-binding_Xin_repeat	-	no_errors	XIRP2	HGNC	ENSG00000163092	tier1	-	-	82	0	0.00	64	6	8.57
XIRP2	0	genome.wustl.edu	37	2	167760191	167760191	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	167760191	167760191	G	T	SNP	XIRP2	ENST00000295237	human	ensembl	74_37	+1	known	missense	c.199	p.G67W	0.000	NULL	pfam_Actin-binding_Xin_repeat	-	no_errors	XIRP2	HGNC	ENSG00000163092	tier1	-	-	84	0	0.00	64	6	8.57
XIRP2	0	genome.wustl.edu	37	2	167992503	167992503	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	167992503	167992503	G	A	SNP	XIRP2	ENST00000295237	human	ensembl	74_37	+1	known	missense	c.493	p.D165N	0.996	NULL	pfam_Actin-binding_Xin_repeat	-	no_errors	XIRP2	HGNC	ENSG00000163092				60	0	0.00	38	2	5.00
XRRA1	0	genome.wustl.edu	37	11	74632295	74632295	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	74632295	74632295	A	C	SNP	XRRA1	ENST00000340360	human	ensembl	74_37	-1	known	missense	c.596	p.L199R	1.000	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	XRRA1	HGNC	ENSG00000166435	tier1	-	-	47	0	0.00	20	12	37.50
XRRA1	0	genome.wustl.edu	37	11	74632295	74632295	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	74632295	74632295	A	C	SNP	XRRA1	ENST00000340360	human	ensembl	74_37	-1	known	missense	c.596	p.L199R	1.000	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	XRRA1	HGNC	ENSG00000166435	tier1	-	-	53	0	0.00	20	12	37.50
YIPF6	0	genome.wustl.edu	37	X	67733414	67733414	+	RNA	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	X	67733414	67733414	T	G	SNP	YIPF6	ENST00000470730	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	YIPF6	HGNC	ENSG00000181704	tier1	-	-	23	0	0.00	3	9	75.00
ZBTB4	0	genome.wustl.edu	37	17	7369677	7369677	+	Silent	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	7369677	7369677	G	A	SNP	ZBTB4	ENST00000311403	human	ensembl	74_37	-1	known	silent	c.444	p.L148	0.271	superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB4	HGNC	ENSG00000174282	tier1	rs146654674	-	120	0	0.00	70	19	21.35
ZBTB4	0	genome.wustl.edu	37	17	7369677	7369677	+	Silent	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	17	7369677	7369677	G	A	SNP	ZBTB4	ENST00000311403	human	ensembl	74_37	-1	known	silent	c.444	p.L148	0.271	superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB4	HGNC	ENSG00000174282	tier1	rs146654674	-	147	0	0.00	70	19	21.35
ZBTB7B	0	genome.wustl.edu	37	1	154987372	154987372	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	154987372	154987372	C	T	SNP	ZBTB7B	ENST00000417934	human	ensembl	74_37	+1	known	missense	c.338	p.T113M	0.001	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB7B	HGNC	ENSG00000160685	tier1	-	-	51	0	0.00	43	8	15.69
ZBTB7B	0	genome.wustl.edu	37	1	154987372	154987372	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	1	154987372	154987372	C	T	SNP	ZBTB7B	ENST00000417934	human	ensembl	74_37	+1	known	missense	c.338	p.T113M	0.001	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB7B	HGNC	ENSG00000160685	tier1	-	-	66	0	0.00	43	8	15.69
ZFHX2	0	genome.wustl.edu	37	14	23996152	23996152	+	Nonsense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	23996152	23996152	T	A	SNP	ZFHX2	ENST00000419474	human	ensembl	74_37	-1	known	nonsense	c.3166	p.K1056*	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX2	HGNC	ENSG00000136367				60	0	0.00	34	4	10.53
ZFP42	0	genome.wustl.edu	37	4	188924157	188924157	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	188924157	188924157	G	C	SNP	ZFP42	ENST00000326866	human	ensembl	74_37	+1	known	missense	c.196	p.D66H	0.010	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFP42	HGNC	ENSG00000179059	tier1	-	-	54	0	0.00	42	8	16.00
ZFP42	0	genome.wustl.edu	37	4	188924157	188924157	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	4	188924157	188924157	G	C	SNP	ZFP42	ENST00000326866	human	ensembl	74_37	+1	known	missense	c.196	p.D66H	0.010	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFP42	HGNC	ENSG00000179059	tier1	-	-	79	0	0.00	42	8	16.00
ZFPM2	0	genome.wustl.edu	37	8	106814840	106814840	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	106814840	106814840	A	G	SNP	ZFPM2	ENST00000407775	human	ensembl	74_37	+1	known	missense	c.2530	p.T844A	0.639	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFPM2	HGNC	ENSG00000169946	tier1	-	-	45	0	0.00	18	34	65.38
ZFPM2	0	genome.wustl.edu	37	8	106814840	106814840	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	106814840	106814840	A	G	SNP	ZFPM2	ENST00000407775	human	ensembl	74_37	+1	known	missense	c.2530	p.T844A	0.639	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFPM2	HGNC	ENSG00000169946	tier1	-	-	74	0	0.00	18	34	65.38
ZNF107	0	genome.wustl.edu	37	7	64168006	64168006	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	64168006	64168006	T	G	SNP	ZNF107	ENST00000344930	human	ensembl	74_37	+1	known	missense	c.1324	p.C442G	0.022	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF107	HGNC	ENSG00000196247				49	0	0.00	47	3	6.00
ZNF133	0	genome.wustl.edu	37	20	18296340	18296340	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	20	18296340	18296340	A	T	SNP	ZNF133	ENST00000396026	human	ensembl	74_37	+1	known	missense	c.854	p.K285M	0.849	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF133	HGNC	ENSG00000125846	tier1	-	-	60	0	0.00	46	5	9.80
ZNF133	0	genome.wustl.edu	37	20	18296340	18296340	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	20	18296340	18296340	A	T	SNP	ZNF133	ENST00000396026	human	ensembl	74_37	+1	known	missense	c.854	p.K285M	0.849	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF133	HGNC	ENSG00000125846	tier1	-	-	79	0	0.00	46	5	9.80
ZNF229	0	genome.wustl.edu	37	19	44933017	44933017	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	44933017	44933017	G	T	SNP	ZNF229	ENST00000588931	human	ensembl	74_37	-1	known	missense	c.1939	p.Q647K	0.411	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF229	HGNC	ENSG00000167383	tier1	-	-	73	0	0.00	56	4	6.67
ZNF234	0	genome.wustl.edu	37	19	44661688	44661688	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	44661688	44661688	A	C	SNP	ZNF234	ENST00000426739	human	ensembl	74_37	+1	known	missense	c.1519	p.T507P	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF234	HGNC	ENSG00000263002	tier1	-	-	101	0	0.00	54	19	25.68
ZNF234	0	genome.wustl.edu	37	19	44661688	44661688	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	44661688	44661688	A	C	SNP	ZNF234	ENST00000426739	human	ensembl	74_37	+1	known	missense	c.1519	p.T507P	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF234	HGNC	ENSG00000263002	tier1	-	-	107	0	0.00	54	19	25.68
ZNF257	0	genome.wustl.edu	37	19	22271475	22271475	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	22271475	22271475	G	T	SNP	ZNF257	ENST00000594947	human	ensembl	74_37	+1	known	missense	c.923	p.R308I	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF257	HGNC	ENSG00000197134				56	0	0.00	35	2	5.41
ZNF292	0	genome.wustl.edu	37	6	87968021	87968021	+	Silent	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	6	87968021	87968021	T	G	SNP	ZNF292	ENST00000369577	human	ensembl	74_37	+1	known	silent	c.4674	p.T1558	0.999	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF292	HGNC	ENSG00000188994				44	0	0.00	28	3	9.68
ZNF408	0	genome.wustl.edu	37	11	46724278	46724278	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	46724278	46724278	G	C	SNP	ZNF408	ENST00000311764	human	ensembl	74_37	+1	known	missense	c.355	p.D119H	0.630	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF408	HGNC	ENSG00000175213	tier1	-	-	146	0	0.00	77	12	13.48
ZNF408	0	genome.wustl.edu	37	11	46724278	46724278	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	11	46724278	46724278	G	C	SNP	ZNF408	ENST00000311764	human	ensembl	74_37	+1	known	missense	c.355	p.D119H	0.630	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF408	HGNC	ENSG00000175213	tier1	-	-	97	0	0.00	77	12	13.48
ZNF410	0	genome.wustl.edu	37	14	74371668	74371668	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	74371668	74371668	G	A	SNP	ZNF410	ENST00000398139	human	ensembl	74_37	+1	known	missense	c.766	p.A256T	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF410	HGNC	ENSG00000119725	tier1	-	-	69	0	0.00	47	20	29.41
ZNF410	0	genome.wustl.edu	37	14	74371668	74371668	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	14	74371668	74371668	G	A	SNP	ZNF410	ENST00000398139	human	ensembl	74_37	+1	known	missense	c.766	p.A256T	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF410	HGNC	ENSG00000119725	tier1	-	-	80	0	0.00	47	20	29.41
ZNF467	0	genome.wustl.edu	37	7	149462894	149462894	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	149462894	149462894	G	T	SNP	ZNF467	ENST00000302017	human	ensembl	74_37	-1	known	missense	c.697	p.R233S	0.999	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF467	HGNC	ENSG00000181444	tier1	-	-	51	0	0.00	25	4	13.79
ZNF503-AS2	0	genome.wustl.edu	37	10	77163096	77163096	+	RNA	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	77163096	77163096	G	C	SNP	ZNF503-AS2	ENST00000425916	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZNF503-AS2	HGNC	ENSG00000237149	tier1	-	-	59	0	0.00	24	9	27.27
ZNF503-AS2	0	genome.wustl.edu	37	10	77163096	77163096	+	RNA	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	10	77163096	77163096	G	C	SNP	ZNF503-AS2	ENST00000425916	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZNF503-AS2	HGNC	ENSG00000237149	tier1	-	-	65	0	0.00	24	9	27.27
ZNF507	0	genome.wustl.edu	37	19	32845759	32845759	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	32845759	32845759	G	A	SNP	ZNF507	ENST00000311921	human	ensembl	74_37	+1	known	missense	c.2023	p.E675K	1.000	smart_Znf_C2H2-like	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF507	HGNC	ENSG00000168813				54	0	0.00	31	2	6.06
ZNF542	0	genome.wustl.edu	37	19	56888972	56888972	+	RNA	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	56888972	56888972	C	A	SNP	ZNF542	ENST00000467807	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.980	-	-	-	no_errors	ZNF542	HGNC	ENSG00000240225	tier1	-	-	64	0	0.00	28	35	55.56
ZNF542	0	genome.wustl.edu	37	19	56888972	56888972	+	RNA	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	56888972	56888972	C	A	SNP	ZNF542	ENST00000467807	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.980	-	-	-	no_errors	ZNF542	HGNC	ENSG00000240225	tier1	-	-	91	0	0.00	28	35	55.56
ZNF565	0	genome.wustl.edu	37	19	36674142	36674142	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	36674142	36674142	C	A	SNP	ZNF565	ENST00000304116	human	ensembl	74_37	-1	known	missense	c.726	p.Q242H	0.980	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF565	HGNC	ENSG00000196357	tier1	-	-	33	0	0.00	26	11	29.73
ZNF570	0	genome.wustl.edu	37	19	37960418	37960418	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	37960418	37960418	A	C	SNP	ZNF570	ENST00000586475	human	ensembl	74_37	+1	putative	missense	c.76	p.S26R	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF570	HGNC	ENSG00000171827	tier1	-	-	33	0	0.00	10	7	41.18
ZNF570	0	genome.wustl.edu	37	19	37960418	37960418	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	37960418	37960418	A	C	SNP	ZNF570	ENST00000586475	human	ensembl	74_37	+1	putative	missense	c.76	p.S26R	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF570	HGNC	ENSG00000171827	tier1	-	-	34	0	0.00	10	7	41.18
ZNF572	0	genome.wustl.edu	37	8	125989136	125989136	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	125989136	125989136	C	A	SNP	ZNF572	ENST00000319286	human	ensembl	74_37	+1	known	missense	c.626	p.T209N	0.990	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF572	HGNC	ENSG00000180938	tier1	-	-	35	0	0.00	39	12	23.53
ZNF572	0	genome.wustl.edu	37	8	125989136	125989136	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	8	125989136	125989136	C	A	SNP	ZNF572	ENST00000319286	human	ensembl	74_37	+1	known	missense	c.626	p.T209N	0.990	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF572	HGNC	ENSG00000180938	tier1	-	-	59	0	0.00	39	12	23.53
ZNF600	0	genome.wustl.edu	37	19	53269900	53269900	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	53269900	53269900	T	A	SNP	ZNF600	ENST00000338230	human	ensembl	74_37	-1	known	missense	c.1109	p.K370M	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF600	HGNC	ENSG00000189190	tier1	-	-	127	0	0.00	97	8	7.62
ZNF600	0	genome.wustl.edu	37	19	53269900	53269900	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	53269900	53269900	T	A	SNP	ZNF600	ENST00000338230	human	ensembl	74_37	-1	known	missense	c.1109	p.K370M	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF600	HGNC	ENSG00000189190	tier1	-	-	86	0	0.00	97	8	7.62
ZNF615	0	genome.wustl.edu	37	19	52505106	52505106	+	Silent	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	52505106	52505106	A	G	SNP	ZNF615	ENST00000594083	human	ensembl	74_37	-1	known	silent	c.198	p.T66	0.000	smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF615	HGNC	ENSG00000197619	tier1	-	-	100	0	0.00	56	5	8.20
ZNF615	0	genome.wustl.edu	37	19	52505106	52505106	+	Silent	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	52505106	52505106	A	G	SNP	ZNF615	ENST00000594083	human	ensembl	74_37	-1	known	silent	c.198	p.T66	0.000	smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF615	HGNC	ENSG00000197619	tier1	-	-	63	0	0.00	56	5	8.20
ZNF616	0	genome.wustl.edu	37	19	52620093	52620093	+	Silent	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	52620093	52620093	A	G	SNP	ZNF616	ENST00000600228	human	ensembl	74_37	-1	known	silent	c.324	p.D108	0.004	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF616	HGNC	ENSG00000204611	tier1	-	-	60	0	0.00	50	11	18.03
ZNF616	0	genome.wustl.edu	37	19	52620093	52620093	+	Silent	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	52620093	52620093	A	G	SNP	ZNF616	ENST00000600228	human	ensembl	74_37	-1	known	silent	c.324	p.D108	0.004	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF616	HGNC	ENSG00000204611	tier1	-	-	87	0	0.00	50	11	18.03
ZNF646	0	genome.wustl.edu	37	16	31093027	31093027	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	31093027	31093027	G	T	SNP	ZNF646	ENST00000394979	human	ensembl	74_37	+1	known	missense	c.5382	p.R1794S	0.396	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF646	HGNC	ENSG00000167395	tier1	-	-	104	0	0.00	63	4	5.97
ZNF646	0	genome.wustl.edu	37	16	31093027	31093027	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	31093027	31093027	G	T	SNP	ZNF646	ENST00000394979	human	ensembl	74_37	+1	known	missense	c.5382	p.R1794S	0.396	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF646	HGNC	ENSG00000167395	tier1	-	-	107	0	0.00	63	4	5.97
ZNF662	0	genome.wustl.edu	37	3	42956638	42956638	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	42956638	42956638	A	G	SNP	ZNF662	ENST00000328199	human	ensembl	74_37	+1	known	missense	c.1151	p.K384R	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF662	HGNC	ENSG00000182983	tier1	-	-	29	0	0.00	28	19	40.43
ZNF662	0	genome.wustl.edu	37	3	42956638	42956638	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	3	42956638	42956638	A	G	SNP	ZNF662	ENST00000328199	human	ensembl	74_37	+1	known	missense	c.1151	p.K384R	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF662	HGNC	ENSG00000182983	tier1	-	-	50	0	0.00	28	19	40.43
ZNF681	0	genome.wustl.edu	37	19	23928012	23928012	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	23928012	23928012	T	G	SNP	ZNF681	ENST00000402377	human	ensembl	74_37	-1	known	missense	c.340	p.S114R	0.019	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF681	HGNC	ENSG00000196172	tier1	-	-	107	0	0.00	45	42	48.28
ZNF681	0	genome.wustl.edu	37	19	23928012	23928012	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	23928012	23928012	T	G	SNP	ZNF681	ENST00000402377	human	ensembl	74_37	-1	known	missense	c.340	p.S114R	0.019	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF681	HGNC	ENSG00000196172	tier1	-	-	59	0	0.00	45	42	48.28
ZNF729	0	genome.wustl.edu	37	19	22498243	22498243	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	22498243	22498243	A	C	SNP	ZNF729	ENST00000601693	human	ensembl	74_37	+1	novel	missense	c.2024	p.K675T	0.996	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF729	HGNC	ENSG00000196350	tier1	-	-	59	0	0.00	66	21	23.86
ZNF733P	0	genome.wustl.edu	37	7	62752733	62752733	+	RNA	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	62752733	62752733	C	T	SNP	ZNF733P	ENST00000331425	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.055	-	-	-	no_errors	ZNF733P	HGNC	ENSG00000185037	tier1	-	-	92	0	0.00	107	8	6.96
ZNF747	0	genome.wustl.edu	37	16	30545589	30545589	+	Nonsense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	30545589	30545589	T	A	SNP	ZNF747	ENST00000252799	human	ensembl	74_37	-1	known	nonsense	c.412	p.R138*	0.009	pfscan_Krueppel-associated_box	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	-	no_errors	ZNF747	HGNC	ENSG00000169955	tier1	-	-	36	0	0.00	35	5	12.50
ZNF747	0	genome.wustl.edu	37	16	30545589	30545589	+	Nonsense_Mutation	SNP	T	T	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	30545589	30545589	T	A	SNP	ZNF747	ENST00000252799	human	ensembl	74_37	-1	known	nonsense	c.412	p.R138*	0.009	pfscan_Krueppel-associated_box	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	-	no_errors	ZNF747	HGNC	ENSG00000169955	tier1	-	-	54	0	0.00	35	5	12.50
ZNF747	0	genome.wustl.edu	37	16	30545590	30545590	+	Nonsense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	30545590	30545590	C	A	SNP	ZNF747	ENST00000535210	human	ensembl	74_37	-1	known	nonsense	c.271	p.E91*	0.009	superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Krueppel-associated_box,pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF747	HGNC	ENSG00000169955	tier1	-	-	37	0	0.00	35	5	12.50
ZNF747	0	genome.wustl.edu	37	16	30545590	30545590	+	Nonsense_Mutation	SNP	C	C	A			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	16	30545590	30545590	C	A	SNP	ZNF747	ENST00000535210	human	ensembl	74_37	-1	known	nonsense	c.271	p.E91*	0.009	superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Krueppel-associated_box,pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF747	HGNC	ENSG00000169955	tier1	-	-	53	0	0.00	35	5	12.50
ZNF772	0	genome.wustl.edu	37	19	57984884	57984884	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	57984884	57984884	C	T	SNP	ZNF772	ENST00000343280	human	ensembl	74_37	-1	known	missense	c.1228	p.A410T	0.498	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF772	HGNC	ENSG00000197128	tier1	-	-	72	0	0.00	65	4	5.80
ZNF804B	0	genome.wustl.edu	37	7	88964359	88964359	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	88964359	88964359	T	C	SNP	ZNF804B	ENST00000333190	human	ensembl	74_37	+1	known	missense	c.2063	p.V688A	0.000	NULL	pfam_Znf_C2H2_jaz	-	no_errors	ZNF804B	HGNC	ENSG00000182348	tier1	-	-	38	0	0.00	31	19	38.00
ZNF804B	0	genome.wustl.edu	37	7	88964359	88964359	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	7	88964359	88964359	T	C	SNP	ZNF804B	ENST00000333190	human	ensembl	74_37	+1	known	missense	c.2063	p.V688A	0.000	NULL	pfam_Znf_C2H2_jaz	-	no_errors	ZNF804B	HGNC	ENSG00000182348	tier1	-	-	48	0	0.00	31	19	38.00
ZNF813	0	genome.wustl.edu	37	19	53994412	53994412	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	53994412	53994412	G	C	SNP	ZNF813	ENST00000396403	human	ensembl	74_37	+1	known	missense	c.926	p.S309T	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF813	HGNC	ENSG00000198346	tier1	-	-	112	0	0.00	68	11	13.92
ZNF813	0	genome.wustl.edu	37	19	53994412	53994412	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	53994412	53994412	G	C	SNP	ZNF813	ENST00000396403	human	ensembl	74_37	+1	known	missense	c.926	p.S309T	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF813	HGNC	ENSG00000198346	tier1	-	-	84	0	0.00	68	11	13.92
ZNF826P	0	genome.wustl.edu	37	19	20607676	20607676	+	RNA	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	20607676	20607676	C	T	SNP	ZNF826P	ENST00000502675	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	ZNF826P	HGNC	ENSG00000231205	tier1	-	-	102	0	0.00	74	13	14.94
ZNF826P	0	genome.wustl.edu	37	19	20607676	20607676	+	RNA	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	20607676	20607676	C	T	SNP	ZNF826P	ENST00000502675	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	ZNF826P	HGNC	ENSG00000231205	tier1	-	-	125	0	0.00	74	13	14.94
ZNF85	0	genome.wustl.edu	37	19	21132738	21132738	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	21132738	21132738	A	C	SNP	ZNF85	ENST00000328178	human	ensembl	74_37	+1	known	missense	c.1418	p.K473T	0.643	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF85	HGNC	ENSG00000105750	tier1	-	-	51	0	0.00	46	14	23.33
ZNF85	0	genome.wustl.edu	37	19	21132738	21132738	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	21132738	21132738	A	C	SNP	ZNF85	ENST00000328178	human	ensembl	74_37	+1	known	missense	c.1418	p.K473T	0.643	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF85	HGNC	ENSG00000105750	tier1	-	-	72	0	0.00	46	14	23.33
ZNF880	0	genome.wustl.edu	37	19	52887662	52887662	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	52887662	52887662	T	C	SNP	ZNF880	ENST00000422689	human	ensembl	74_37	+1	known	missense	c.829	p.F277L	0.645	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF880	HGNC	ENSG00000221923	tier1	-	-	43	0	0.00	45	6	11.76
ZNF880	0	genome.wustl.edu	37	19	52887662	52887662	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	52887662	52887662	T	C	SNP	ZNF880	ENST00000422689	human	ensembl	74_37	+1	known	missense	c.829	p.F277L	0.645	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF880	HGNC	ENSG00000221923	tier1	-	-	71	0	0.00	45	6	11.76
ZNF99	0	genome.wustl.edu	37	19	22951136	22951136	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	22951136	22951136	T	G	SNP	ZNF99	ENST00000397104	human	ensembl	74_37	-1	known	missense	c.260	p.K87T	0.104	pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF99	HGNC	ENSG00000213973	tier1	-	-	118	0	0.00	77	47	37.90
ZNF99	0	genome.wustl.edu	37	19	22951136	22951136	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	19	22951136	22951136	T	G	SNP	ZNF99	ENST00000397104	human	ensembl	74_37	-1	known	missense	c.260	p.K87T	0.104	pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF99	HGNC	ENSG00000213973	tier1	-	-	190	0	0.00	77	47	37.90
ZSWIM2	0	genome.wustl.edu	37	2	187694604	187694604	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	2	187694604	187694604	T	G	SNP	ZSWIM2	ENST00000295131	human	ensembl	74_37	-1	known	missense	c.945	p.Q315H	0.003	NULL	pfam_Znf_SWIM,pfam_Znf_ZZ,smart_Znf_RING,pfscan_Znf_RING,pfscan_Znf_SWIM,pfscan_Znf_ZZ	-	no_errors	ZSWIM2	HGNC	ENSG00000163012				83	0	0.00	68	5	6.85
ZSWIM6	0	genome.wustl.edu	37	5	60839555	60839555	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	60839555	60839555	C	T	SNP	ZSWIM6	ENST00000252744	human	ensembl	74_37	+1	novel	missense	c.3059	p.A1020V	1.000	NULL	pfscan_Znf_SWIM,prints_Antifreeze_1	-	no_errors	ZSWIM6	HGNC	ENSG00000130449	tier1	-	-	34	0	0.00	22	11	33.33
ZSWIM6	0	genome.wustl.edu	37	5	60839555	60839555	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	60839555	60839555	C	T	SNP	ZSWIM6	ENST00000252744	human	ensembl	74_37	+1	novel	missense	c.3059	p.A1020V	1.000	NULL	pfscan_Znf_SWIM,prints_Antifreeze_1	-	no_errors	ZSWIM6	HGNC	ENSG00000130449	tier1	-	-	44	0	0.00	22	11	33.33
ZSWIM6	0	genome.wustl.edu	37	5	60768550	60768550	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RE-01A-11D-A33E-09	TCGA-IC-A6RE-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	409bc915-0434-4e4b-b96b-61465c83580a	f93260cb-2f87-479b-a13f-1b58e222ed2a	5	60768550	60768550	C	T	SNP	ZSWIM6	ENST00000252744	human	ensembl	74_37	+1	novel	missense	c.719	p.S240L	1.000	NULL	pfscan_Znf_SWIM,prints_Antifreeze_1	-	no_errors	ZSWIM6	HGNC	ENSG00000130449				33	0	0.00	35	3	7.89
