Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ABCF3	0	genome.wustl.edu	37	3	183907232	183907232	+	Splice_Site	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	3	183907232	183907232	G	A	SNP	ABCF3	ENST00000429586	human	ensembl	74_37	+1	known	splice_site	c.1113+1	e12+1	1.000	-	-	-	no_errors	ABCF3	HGNC	ENSG00000161204	tier1	-	-	26	0	0.00	55	12	17.91
ABCF3	0	genome.wustl.edu	37	3	183907232	183907232	+	Splice_Site	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	3	183907232	183907232	G	A	SNP	ABCF3	ENST00000429586	human	ensembl	74_37	+1	known	splice_site	c.1113+1	e12+1	1.000	-	-	-	no_errors	ABCF3	HGNC	ENSG00000161204	tier1	-	-	35	0	0.00	55	12	17.91
ACAD9	0	genome.wustl.edu	37	3	128614245	128614245	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	3	128614245	128614245	G	T	SNP	ACAD9	ENST00000308982	human	ensembl	74_37	+1	known	missense	c.439	p.A147S	1.000	pfam_AcylCoA_DH/ox_N,superfamily_AcylCoA_DH/oxidase_NM_dom	pfam_AcylCo_DH/oxidase_C,pfam_AcylCoA_DH/ox_N,pfam_Acyl-CoA_Oxase/DH_cen-dom,pfam_Acyl-CoA_DH_2_C,superfamily_AcylCoA_DH/oxidase_NM_dom,superfamily_AcylCo_DH/oxidase_C	-	no_errors	ACAD9	HGNC	ENSG00000177646				32	0	0.00	71	4	5.33
ACOXL	0	genome.wustl.edu	37	2	111542371	111542371	+	Silent	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	111542371	111542371	G	A	SNP	ACOXL	ENST00000439055	human	ensembl	74_37	+1	known	silent	c.138	p.A46	0.003	superfamily_AcylCoA_DH/oxidase_NM_dom,pirsf_Acyl-CoA_oxidase	pfam_Acyl-CoA_oxidase_C,pfam_Acyl-CoA_Oxase/DH_cen-dom,pfam_AcylCo_DH/oxidase_C,superfamily_AcylCoA_DH/oxidase_NM_dom,superfamily_AcylCo_DH/oxidase_C,pirsf_Acyl-CoA_oxidase	-	no_errors	ACOXL	HGNC	ENSG00000153093	tier1	-	-	29	0	0.00	28	19	40.43
ADAD1	0	genome.wustl.edu	37	4	123333900	123333900	+	Silent	SNP	T	T	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	4	123333900	123333900	T	C	SNP	ADAD1	ENST00000296513	human	ensembl	74_37	+1	known	silent	c.1185	p.L395	0.998	pfam_A_deamin,smart_A_deamin,pfscan_A_deamin	pfam_A_deamin,pfam_dsRNA-bd_dom,smart_dsRNA-bd_dom,smart_A_deamin,pfscan_dsRNA-bd_dom,pfscan_A_deamin	-	no_errors	ADAD1	HGNC	ENSG00000164113	tier1	-	-	35	0	0.00	26	7	21.21
ADAD1	0	genome.wustl.edu	37	4	123333900	123333900	+	Silent	SNP	T	T	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	4	123333900	123333900	T	C	SNP	ADAD1	ENST00000296513	human	ensembl	74_37	+1	known	silent	c.1185	p.L395	0.998	pfam_A_deamin,smart_A_deamin,pfscan_A_deamin	pfam_A_deamin,pfam_dsRNA-bd_dom,smart_dsRNA-bd_dom,smart_A_deamin,pfscan_dsRNA-bd_dom,pfscan_A_deamin	-	no_errors	ADAD1	HGNC	ENSG00000164113	tier1	-	-	47	0	0.00	26	7	21.21
ADAMTS20	0	genome.wustl.edu	37	12	43925975	43925975	+	Silent	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	12	43925975	43925975	G	A	SNP	ADAMTS20	ENST00000389420	human	ensembl	74_37	-1	known	silent	c.477	p.N159	1.000	pfam_Peptidase_M12B_N	pfam_Pept_M12B_GON-ADAMTSs,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Pept_M12B_GON-ADAMTSs,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS20	HGNC	ENSG00000173157	tier1	-	-	36	0	0.00	33	14	29.79
ADAMTS20	0	genome.wustl.edu	37	12	43925975	43925975	+	Silent	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	12	43925975	43925975	G	A	SNP	ADAMTS20	ENST00000389420	human	ensembl	74_37	-1	known	silent	c.477	p.N159	1.000	pfam_Peptidase_M12B_N	pfam_Pept_M12B_GON-ADAMTSs,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Pept_M12B_GON-ADAMTSs,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS20	HGNC	ENSG00000173157	tier1	-	-	40	0	0.00	33	14	29.79
ADAMTSL1	0	genome.wustl.edu	37	9	18680353	18680353	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	9	18680353	18680353	G	A	SNP	ADAMTSL1	ENST00000327883	human	ensembl	74_37	+1	known	missense	c.1180	p.G394R	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Thrombospondin_1_rpt,pfam_ADAM_spacer1,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,prints_Peptidase_M12B_ADAM-TS,pfscan_Thrombospondin_1_rpt	-	no_errors	ADAMTSL1	HGNC	ENSG00000178031	tier1	-	-	27	0	0.00	26	13	33.33
ADAMTSL1	0	genome.wustl.edu	37	9	18680353	18680353	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	9	18680353	18680353	G	A	SNP	ADAMTSL1	ENST00000327883	human	ensembl	74_37	+1	known	missense	c.1180	p.G394R	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Thrombospondin_1_rpt,pfam_ADAM_spacer1,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,prints_Peptidase_M12B_ADAM-TS,pfscan_Thrombospondin_1_rpt	-	no_errors	ADAMTSL1	HGNC	ENSG00000178031	tier1	-	-	64	0	0.00	26	13	33.33
ADAR	0	genome.wustl.edu	37	1	154560661	154560661	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	154560661	154560661	G	T	SNP	ADAR	ENST00000292205	human	ensembl	74_37	-1	known	missense	c.3088	p.R1030S	0.600	pfam_A_deamin,smart_A_deamin,pfscan_A_deamin	pfam_A_deamin,pfam_dsRNA_A_deaminase,pfam_dsRNA-bd_dom,smart_dsRNA_A_deaminase,smart_dsRNA-bd_dom,smart_A_deamin,pfscan_dsRNA-bd_dom,pfscan_dsRNA_A_deaminase,pfscan_A_deamin	-	no_errors	ADAR	HGNC	ENSG00000160710	tier1	-	-	48	0	0.00	58	4	6.45
ADAR	0	genome.wustl.edu	37	1	154560661	154560661	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	154560661	154560661	G	T	SNP	ADAR	ENST00000292205	human	ensembl	74_37	-1	known	missense	c.3088	p.R1030S	0.600	pfam_A_deamin,smart_A_deamin,pfscan_A_deamin	pfam_A_deamin,pfam_dsRNA_A_deaminase,pfam_dsRNA-bd_dom,smart_dsRNA_A_deaminase,smart_dsRNA-bd_dom,smart_A_deamin,pfscan_dsRNA-bd_dom,pfscan_dsRNA_A_deaminase,pfscan_A_deamin	-	no_errors	ADAR	HGNC	ENSG00000160710	tier1	-	-	65	0	0.00	58	4	6.45
ADORA2A	0	genome.wustl.edu	37	22	24836880	24836880	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	22	24836880	24836880	C	A	SNP	ADORA2A	ENST00000337539	human	ensembl	74_37	+1	known	missense	c.662	p.A221E	0.350	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Adeno_A2A_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Adeno_A2A_rcpt,prints_GPCR_Rhodpsn,prints_Adenosn_rcpt	-	no_errors	ADORA2A	HGNC	ENSG00000128271	tier1	-	-	22	0	0.00	19	4	17.39
AGAP5	0	genome.wustl.edu	37	10	75435611	75435611	+	Silent	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	10	75435611	75435611	C	T	SNP	AGAP5	ENST00000374094	human	ensembl	74_37	-1	known	silent	c.807	p.P269	1.000	NULL	pfam_ArfGAP,pfam_Pleckstrin_homology,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	AGAP5	HGNC	ENSG00000172650	tier1	-	-	187	0	0.00	209	143	40.62
ALG13	0	genome.wustl.edu	37	X	110928199	110928199	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	X	110928199	110928199	G	T	SNP	ALG13	ENST00000371979	human	ensembl	74_37	+1	known	missense	c.251	p.G84V	1.000	pfam_Glyco_trans_28_C	pfam_Glyco_trans_28_C	-	no_errors	ALG13	HGNC	ENSG00000101901	tier1	-	-	46	0	0.00	74	4	5.13
ALG13	0	genome.wustl.edu	37	X	110928199	110928199	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	X	110928199	110928199	G	T	SNP	ALG13	ENST00000371979	human	ensembl	74_37	+1	known	missense	c.251	p.G84V	1.000	pfam_Glyco_trans_28_C	pfam_Glyco_trans_28_C	-	no_errors	ALG13	HGNC	ENSG00000101901	tier1	-	-	72	0	0.00	74	4	5.13
AMBRA1	0	genome.wustl.edu	37	11	46515719	46515719	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	11	46515719	46515719	C	T	SNP	AMBRA1	ENST00000458649	human	ensembl	74_37	-1	known	missense	c.2375	p.R792H	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	AMBRA1	HGNC	ENSG00000110497	tier1	-	-	41	0	0.00	39	12	23.53
AMBRA1	0	genome.wustl.edu	37	11	46515719	46515719	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	11	46515719	46515719	C	T	SNP	AMBRA1	ENST00000458649	human	ensembl	74_37	-1	known	missense	c.2375	p.R792H	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	AMBRA1	HGNC	ENSG00000110497	tier1	-	-	56	0	0.00	39	12	23.53
AMOT	0	genome.wustl.edu	37	X	112048235	112048235	+	Silent	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	X	112048235	112048235	G	T	SNP	AMOT	ENST00000371959	human	ensembl	74_37	-1	known	silent	c.1716	p.I572	0.809	NULL	pfam_Angiomotin_C,superfamily_Prefoldin,prints_Angiomotin	-	no_errors	AMOT	HGNC	ENSG00000126016	tier1	-	-	53	0	0.00	43	18	29.51
AMOT	0	genome.wustl.edu	37	X	112048235	112048235	+	Silent	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	X	112048235	112048235	G	T	SNP	AMOT	ENST00000371959	human	ensembl	74_37	-1	known	silent	c.1716	p.I572	0.809	NULL	pfam_Angiomotin_C,superfamily_Prefoldin,prints_Angiomotin	-	no_errors	AMOT	HGNC	ENSG00000126016	tier1	-	-	83	0	0.00	43	18	29.51
ANKRD23	0	genome.wustl.edu	37	2	97507832	97507833	+	Frame_Shift_Del	DEL	TG	TG	-			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	97507832	97507833	TG	-	DEL	ANKRD23	ENST00000318357	human	ensembl	74_37	-1	known	frame_shift_del	c.265_264	p.H88fs	0.830:0.775	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD23	HGNC	ENSG00000163126	tier1			61	0	0.00	81	23	22.12
ANKRD23	0	genome.wustl.edu	37	2	97507832	97507833	+	Frame_Shift_Del	DEL	TG	TG	-			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	97507832	97507833	TG	-	DEL	ANKRD23	ENST00000318357	human	ensembl	74_37	-1	known	frame_shift_del	c.265_264	p.H88fs	0.830:0.775	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD23	HGNC	ENSG00000163126	tier1			78	0	0.00	81	23	22.12
ANKRD30B	0	genome.wustl.edu	37	18	14851558	14851558	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	18	14851558	14851558	G	T	SNP	ANKRD30B	ENST00000358984	human	ensembl	74_37	+1	known	missense	c.3258	p.M1086I	0.930	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD30B	HGNC	ENSG00000180777	tier1	-	-	45	0	0.00	63	4	5.88
ANKRD30B	0	genome.wustl.edu	37	18	14851558	14851558	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	18	14851558	14851558	G	T	SNP	ANKRD30B	ENST00000358984	human	ensembl	74_37	+1	known	missense	c.3258	p.M1086I	0.930	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD30B	HGNC	ENSG00000180777	tier1	-	-	47	0	0.00	63	4	5.88
ANKRD36BP2	0	genome.wustl.edu	37	2	89102628	89102629	+	RNA	DEL	TG	TG	-			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	89102628	89102629	TG	0	DEL	ANKRD36BP2	ENST00000393525	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002:0.002	-	-	-	no_errors	ANKRD36BP2	HGNC	ENSG00000230006				20	0	0.00	59	14	19.18
ANKRD53	0	genome.wustl.edu	37	2	71211838	71211838	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	71211838	71211838	G	A	SNP	ANKRD53	ENST00000360589	human	ensembl	74_37	+1	putative	missense	c.1001	p.R334Q	0.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD53	HGNC	ENSG00000144031	tier1	-	-	61	0	0.00	73	17	18.89
ANKRD53	0	genome.wustl.edu	37	2	71211838	71211838	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	71211838	71211838	G	A	SNP	ANKRD53	ENST00000360589	human	ensembl	74_37	+1	putative	missense	c.1001	p.R334Q	0.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD53	HGNC	ENSG00000144031	tier1	-	-	74	0	0.00	73	17	18.89
ANO7	0	genome.wustl.edu	37	2	242149770	242149770	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	242149770	242149770	G	T	SNP	ANO7	ENST00000274979	human	ensembl	74_37	+1	known	missense	c.1582	p.V528L	0.724	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO7	HGNC	ENSG00000146205	tier1	-	-	28	0	0.00	16	17	51.52
ARGFX	0	genome.wustl.edu	37	3	121305141	121305141	+	Silent	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	3	121305141	121305141	G	T	SNP	ARGFX	ENST00000334384	human	ensembl	74_37	+1	known	silent	c.642	p.V214	0.164	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	ARGFX	HGNC	ENSG00000186103	tier1	-	-	63	0	0.00	59	4	6.35
ARHGAP19	0	genome.wustl.edu	37	10	98985868	98985868	+	RNA	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	10	98985868	98985868	C	T	SNP	ARHGAP19	ENST00000487035	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.015	-	-	-	no_errors	ARHGAP19	HGNC	ENSG00000213390	tier1	-	-	23	0	0.00	34	13	27.66
ARHGAP19	0	genome.wustl.edu	37	10	98985868	98985868	+	RNA	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	10	98985868	98985868	C	T	SNP	ARHGAP19	ENST00000487035	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.015	-	-	-	no_errors	ARHGAP19	HGNC	ENSG00000213390	tier1	-	-	25	0	0.00	34	13	27.66
ARHGEF2	0	genome.wustl.edu	37	1	155936636	155936636	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	155936636	155936636	G	A	SNP	ARHGEF2	ENST00000368315	human	ensembl	74_37	-1	known	missense	c.254	p.A85V	1.000	smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_Kinase_C-like_PE/DAG-bd	pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_DH-domain,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain	-	no_errors	ARHGEF2	HGNC	ENSG00000116584	tier1	-	-	15	0	0.00	26	9	25.71
ARHGEF2	0	genome.wustl.edu	37	1	155936636	155936636	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	155936636	155936636	G	A	SNP	ARHGEF2	ENST00000368315	human	ensembl	74_37	-1	known	missense	c.254	p.A85V	1.000	smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_Kinase_C-like_PE/DAG-bd	pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_DH-domain,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain	-	no_errors	ARHGEF2	HGNC	ENSG00000116584	tier1	-	-	30	0	0.00	26	9	25.71
ARMS2	0	genome.wustl.edu	37	10	124214282	124214282	+	Silent	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	10	124214282	124214282	G	T	SNP	ARMS2	ENST00000528446	human	ensembl	74_37	+1	known	silent	c.39	p.A13	0.000	NULL	NULL	-	no_errors	ARMS2	HGNC	ENSG00000254636	tier1	-	-	44	0	0.00	64	4	5.88
ASPM	0	genome.wustl.edu	37	1	197093437	197093437	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	197093437	197093437	G	T	SNP	ASPM	ENST00000367409	human	ensembl	74_37	-1	known	missense	c.3193	p.Q1065K	0.943	superfamily_CH-domain,superfamily_ARM-type_fold	pfam_IQ_motif_EF-hand-BS,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_CH-domain,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_CH-domain,smart_IQ_motif_EF-hand-BS,pfscan_CH-domain,pfscan_IQ_motif_EF-hand-BS	-	no_errors	ASPM	HGNC	ENSG00000066279				25	0	0.00	32	4	11.11
ATP2C2	0	genome.wustl.edu	37	16	84485637	84485637	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	16	84485637	84485637	G	T	SNP	ATP2C2	ENST00000262429	human	ensembl	74_37	+1	known	nonsense	c.1771	p.E591*	0.000	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Ca-transp_PMR1	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_PMR1,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2C2	HGNC	ENSG00000064270	tier1	-	-	40	0	0.00	51	4	7.27
ATP2C2	0	genome.wustl.edu	37	16	84485637	84485637	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	16	84485637	84485637	G	T	SNP	ATP2C2	ENST00000262429	human	ensembl	74_37	+1	known	nonsense	c.1771	p.E591*	0.000	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Ca-transp_PMR1	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_PMR1,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2C2	HGNC	ENSG00000064270	tier1	-	-	46	0	0.00	51	4	7.27
ATP8A2	0	genome.wustl.edu	37	13	26411318	26411318	+	Silent	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	13	26411318	26411318	G	T	SNP	ATP8A2	ENST00000381655	human	ensembl	74_37	+1	known	silent	c.2772	p.P924	0.006	tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8A2	HGNC	ENSG00000132932				54	0	0.00	66	4	5.71
BCL9	0	genome.wustl.edu	37	1	147084715	147084715	+	Silent	SNP	T	T	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	147084715	147084715	T	C	SNP	BCL9	ENST00000234739	human	ensembl	74_37	+1	known	silent	c.87	p.R29	1.000	NULL	pfam_BCL9_beta-catenin-bd_dom	-	no_errors	BCL9	HGNC	ENSG00000116128				51	0	0.00	68	4	5.56
BMPER	0	genome.wustl.edu	37	7	34014313	34014313	+	Splice_Site	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	7	34014313	34014313	G	T	SNP	BMPER	ENST00000297161	human	ensembl	74_37	+1	known	splice_site	c.494-1	e6-1	1.000	-	-	-	no_errors	BMPER	HGNC	ENSG00000164619	tier1	-	-	44	0	0.00	50	29	36.71
BMPER	0	genome.wustl.edu	37	7	34014313	34014313	+	Splice_Site	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	7	34014313	34014313	G	T	SNP	BMPER	ENST00000297161	human	ensembl	74_37	+1	known	splice_site	c.494-1	e6-1	1.000	-	-	-	no_errors	BMPER	HGNC	ENSG00000164619	tier1	-	-	74	0	0.00	50	29	36.71
C11orf16	0	genome.wustl.edu	37	11	8947409	8947409	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	11	8947409	8947409	G	T	SNP	C11orf16	ENST00000326053	human	ensembl	74_37	-1	known	missense	c.805	p.H269N	0.001	NULL	NULL	-	no_errors	C11orf16	HGNC	ENSG00000176029				35	0	0.00	62	4	5.97
C12orf73	0	genome.wustl.edu	37	12	104345185	104345185	+	RNA	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	12	104345185	104345185	G	T	SNP	C12orf73	ENST00000543740	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	C12orf73	HGNC	ENSG00000204954	tier1	-	-	22	0	0.00	25	4	13.79
C1orf61	0	genome.wustl.edu	37	1	156377214	156377214	+	RNA	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	156377214	156377214	C	A	SNP	C1orf61	ENST00000488498	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.060	-	-	-	no_errors	C1orf61	HGNC	ENSG00000125462	tier1	-	-	28	0	0.00	22	13	37.14
C1orf61	0	genome.wustl.edu	37	1	156377214	156377214	+	RNA	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	156377214	156377214	C	A	SNP	C1orf61	ENST00000488498	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.060	-	-	-	no_errors	C1orf61	HGNC	ENSG00000125462	tier1	-	-	38	0	0.00	22	13	37.14
C8A	0	genome.wustl.edu	37	1	57373691	57373691	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	57373691	57373691	G	T	SNP	C8A	ENST00000361249	human	ensembl	74_37	+1	known	missense	c.1285	p.G429C	0.010	pfam_MACPF,smart_MACPF	pfam_MACPF,pfam_LDrepeatLR_classA_rpt,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,superfamily_LDrepeatLR_classA_rpt,smart_Thrombospondin_1_rpt,smart_LDrepeatLR_classA_rpt,smart_MACPF,pfscan_LDrepeatLR_classA_rpt,pfscan_Thrombospondin_1_rpt,prints_MAC_perforin	-	no_errors	C8A	HGNC	ENSG00000157131				38	0	0.00	62	4	6.06
CACNA1C	0	genome.wustl.edu	37	12	2717687	2717687	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	12	2717687	2717687	C	A	SNP	CACNA1C	ENST00000399634	human	ensembl	74_37	+1	known	missense	c.3367	p.R1123S	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCC_L_a1csu,prints_VDCCAlpha1,prints_VDCC_L_a1su	-	no_errors	CACNA1C	HGNC	ENSG00000151067				23	0	0.00	32	2	5.88
CACNA1D	0	genome.wustl.edu	37	3	53808636	53808636	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	3	53808636	53808636	G	T	SNP	CACNA1D	ENST00000288139	human	ensembl	74_37	+1	known	missense	c.4193	p.R1398I	1.000	pfam_Ion_trans_dom,pfam_PKD1_2_channel	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_L_a1su,prints_LVDCC_a1dsu	-	no_errors	CACNA1D	HGNC	ENSG00000157388				43	0	0.00	34	2	5.56
CASP5	0	genome.wustl.edu	37	11	104872776	104872776	+	Silent	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	11	104872776	104872776	G	A	SNP	CASP5	ENST00000393141	human	ensembl	74_37	-1	known	silent	c.735	p.D245	0.000	pfam_Pept_C14_caspase,smart_Pept_C14A_p45_core,pirsf_Caspase_IL-1_beta,pfscan_Pept_C14_ICE_p20,prints_Pept_C14A_p45_core	pfam_Pept_C14_caspase,pfam_CARD,superfamily_DEATH-like_dom,smart_CARD,smart_Pept_C14A_p45_core,pirsf_Caspase_IL-1_beta,pfscan_CARD,pfscan_Pept_C14_p10,pfscan_Pept_C14_ICE_p20,prints_Pept_C14A_p45_core	-	no_errors	CASP5	HGNC	ENSG00000137757	tier1	-	-	41	0	0.00	35	10	22.22
CASP5	0	genome.wustl.edu	37	11	104872776	104872776	+	Silent	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	11	104872776	104872776	G	A	SNP	CASP5	ENST00000393141	human	ensembl	74_37	-1	known	silent	c.735	p.D245	0.000	pfam_Pept_C14_caspase,smart_Pept_C14A_p45_core,pirsf_Caspase_IL-1_beta,pfscan_Pept_C14_ICE_p20,prints_Pept_C14A_p45_core	pfam_Pept_C14_caspase,pfam_CARD,superfamily_DEATH-like_dom,smart_CARD,smart_Pept_C14A_p45_core,pirsf_Caspase_IL-1_beta,pfscan_CARD,pfscan_Pept_C14_p10,pfscan_Pept_C14_ICE_p20,prints_Pept_C14A_p45_core	-	no_errors	CASP5	HGNC	ENSG00000137757	tier1	-	-	66	0	0.00	35	10	22.22
CASP8	0	genome.wustl.edu	37	2	202137430	202137431	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	202137430	202137431	AA	-	DEL	CASP8	ENST00000358485	human	ensembl	74_37	+1	known	frame_shift_del	c.658_659	p.R221fs	0.994:0.984	pfam_DED,superfamily_DEATH-like_dom,smart_DED,pfscan_DED	pfam_DED,pfam_Pept_C14_caspase,superfamily_DEATH-like_dom,smart_DED,smart_Pept_C14A_p45_core,pfscan_DED,pfscan_Pept_C14_p10,pfscan_Pept_C14_ICE_p20,prints_Pept_C14A_p45_core	-	no_errors	CASP8	HGNC	ENSG00000064012	tier1			48	0	0.00	35	27	43.55
CASP8	0	genome.wustl.edu	37	2	202137430	202137431	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	202137430	202137431	AA	-	DEL	CASP8	ENST00000358485	human	ensembl	74_37	+1	known	frame_shift_del	c.658_659	p.R221fs	0.994:0.984	pfam_DED,superfamily_DEATH-like_dom,smart_DED,pfscan_DED	pfam_DED,pfam_Pept_C14_caspase,superfamily_DEATH-like_dom,smart_DED,smart_Pept_C14A_p45_core,pfscan_DED,pfscan_Pept_C14_p10,pfscan_Pept_C14_ICE_p20,prints_Pept_C14A_p45_core	-	no_errors	CASP8	HGNC	ENSG00000064012	tier1			61	0	0.00	35	27	43.55
CCDC170	0	genome.wustl.edu	37	6	151859407	151859407	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	6	151859407	151859407	G	T	SNP	CCDC170	ENST00000367290	human	ensembl	74_37	+1	known	missense	c.414	p.K138N	1.000	NULL	superfamily_Prefoldin,superfamily_Smac_DIABLO-like	-	no_errors	CCDC170	HGNC	ENSG00000120262				39	0	0.00	53	4	7.02
CCDC85A	0	genome.wustl.edu	37	2	56420423	56420423	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	56420423	56420423	A	T	SNP	CCDC85A	ENST00000407595	human	ensembl	74_37	+1	known	missense	c.1088	p.K363I	1.000	NULL	pfam_DUF2216_coiled-coil	-	no_errors	CCDC85A	HGNC	ENSG00000055813	tier1	-	-	27	0	0.00	43	11	20.37
CCDC85A	0	genome.wustl.edu	37	2	56420423	56420423	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	56420423	56420423	A	T	SNP	CCDC85A	ENST00000407595	human	ensembl	74_37	+1	known	missense	c.1088	p.K363I	1.000	NULL	pfam_DUF2216_coiled-coil	-	no_errors	CCDC85A	HGNC	ENSG00000055813	tier1	-	-	46	0	0.00	43	11	20.37
CCP110	0	genome.wustl.edu	37	16	19547487	19547487	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	16	19547487	19547487	G	T	SNP	CCP110	ENST00000381396	human	ensembl	74_37	+1	known	nonsense	c.496	p.E166*	0.504	NULL	NULL	-	no_errors	CCP110	HGNC	ENSG00000103540	tier1	-	-	74	0	0.00	66	4	5.71
CCP110	0	genome.wustl.edu	37	16	19547487	19547487	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	16	19547487	19547487	G	T	SNP	CCP110	ENST00000381396	human	ensembl	74_37	+1	known	nonsense	c.496	p.E166*	0.504	NULL	NULL	-	no_errors	CCP110	HGNC	ENSG00000103540	tier1	-	-	79	0	0.00	66	4	5.71
CD109	0	genome.wustl.edu	37	6	74497121	74497121	+	Silent	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	6	74497121	74497121	C	T	SNP	CD109	ENST00000287097	human	ensembl	74_37	+1	known	silent	c.2502	p.V834	0.997	NULL	pfam_A2M_comp,pfam_A2M_N_2,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd	-	no_errors	CD109	HGNC	ENSG00000156535	tier1	rs143756315	-	36	0	0.00	47	16	25.40
CD109	0	genome.wustl.edu	37	6	74497121	74497121	+	Silent	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	6	74497121	74497121	C	T	SNP	CD109	ENST00000287097	human	ensembl	74_37	+1	known	silent	c.2502	p.V834	0.997	NULL	pfam_A2M_comp,pfam_A2M_N_2,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd	-	no_errors	CD109	HGNC	ENSG00000156535	tier1	rs143756315	-	58	0	0.00	47	16	25.40
CDH18	0	genome.wustl.edu	37	5	19747230	19747230	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	5	19747230	19747230	C	A	SNP	CDH18	ENST00000274170	human	ensembl	74_37	-1	known	missense	c.344	p.S115I	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH18	HGNC	ENSG00000145526	tier1	-	-	26	0	0.00	29	12	29.27
CDH23	0	genome.wustl.edu	37	10	73553088	73553088	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	10	73553088	73553088	G	A	SNP	CDH23	ENST00000224721	human	ensembl	74_37	+1	putative	missense	c.6418	p.E2140K	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH23	HGNC	ENSG00000107736	tier1	-	-	39	0	0.00	25	4	13.79
CDH23	0	genome.wustl.edu	37	10	73553088	73553088	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	10	73553088	73553088	G	A	SNP	CDH23	ENST00000224721	human	ensembl	74_37	+1	putative	missense	c.6418	p.E2140K	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH23	HGNC	ENSG00000107736	tier1	-	-	42	0	0.00	25	4	13.79
CDH3	0	genome.wustl.edu	37	16	68712181	68712181	+	Splice_Site	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	16	68712181	68712181	G	T	SNP	CDH3	ENST00000264012	human	ensembl	74_37	+1	known	splice_site	c.390+1	e4+1	1.000	-	-	-	no_errors	CDH3	HGNC	ENSG00000062038	tier1	-	-	29	0	0.00	43	4	8.33
CDH3	0	genome.wustl.edu	37	16	68712181	68712181	+	Splice_Site	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	16	68712181	68712181	G	T	SNP	CDH3	ENST00000264012	human	ensembl	74_37	+1	known	splice_site	c.390+1	e4+1	1.000	-	-	-	no_errors	CDH3	HGNC	ENSG00000062038	tier1	-	-	46	0	0.00	43	4	8.33
CDH5	0	genome.wustl.edu	37	16	66426285	66426285	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	16	66426285	66426285	G	T	SNP	CDH5	ENST00000341529	human	ensembl	74_37	+1	known	nonsense	c.1216	p.G406*	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH5	HGNC	ENSG00000179776				27	0	0.00	55	3	5.17
CDH7	0	genome.wustl.edu	37	18	63511205	63511205	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	18	63511205	63511205	C	T	SNP	CDH7	ENST00000323011	human	ensembl	74_37	+1	known	missense	c.1139	p.P380L	0.325	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH7	HGNC	ENSG00000081138	tier1	-	-	90	0	0.00	80	24	23.08
CDH7	0	genome.wustl.edu	37	18	63511205	63511205	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	18	63511205	63511205	C	T	SNP	CDH7	ENST00000323011	human	ensembl	74_37	+1	known	missense	c.1139	p.P380L	0.325	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH7	HGNC	ENSG00000081138	tier1	-	-	93	0	0.00	80	24	23.08
CDK13	0	genome.wustl.edu	37	7	40102486	40102486	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	7	40102486	40102486	G	A	SNP	CDK13	ENST00000181839	human	ensembl	74_37	+1	known	missense	c.2662	p.E888K	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK13	HGNC	ENSG00000065883				56	0	0.00	63	4	5.97
CHCHD4	0	genome.wustl.edu	37	3	14163429	14163429	+	Nonsense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	3	14163429	14163429	C	A	SNP	CHCHD4	ENST00000295767	human	ensembl	74_37	-1	known	nonsense	c.49	p.G17*	0.043	NULL	pfam_CHCH	-	no_errors	CHCHD4	HGNC	ENSG00000163528	tier1	-	-	29	0	0.00	42	4	8.70
CHD8	0	genome.wustl.edu	37	14	21894322	21894322	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	14	21894322	21894322	G	T	SNP	CHD8	ENST00000399982	human	ensembl	74_37	-1	known	missense	c.1681	p.Q561K	0.990	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_BRK_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD8	HGNC	ENSG00000100888				23	0	0.00	21	2	8.70
CHEK2	0	genome.wustl.edu	37	22	29091840	29091840	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	22	29091840	29091840	T	C	SNP	CHEK2	ENST00000382580	human	ensembl	74_37	-1	known	missense	c.1246	p.K416E	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_FHA_dom,superfamily_Kinase-like_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_FHA_dom,pfscan_Prot_kinase_dom	-	no_errors	CHEK2	HGNC	ENSG00000183765				51	0	0.00	67	5	6.94
CLASP2	0	genome.wustl.edu	37	3	33618714	33618714	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	3	33618714	33618714	G	T	SNP	CLASP2	ENST00000480013	human	ensembl	74_37	-1	known	missense	c.1691	p.P564H	1.000	superfamily_ARM-type_fold	pfam_CLASP_N_dom,superfamily_ARM-type_fold	-	no_errors	CLASP2	HGNC	ENSG00000163539	tier1	-	-	65	0	0.00	88	6	6.38
CLASP2	0	genome.wustl.edu	37	3	33618714	33618714	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	3	33618714	33618714	G	T	SNP	CLASP2	ENST00000480013	human	ensembl	74_37	-1	known	missense	c.1691	p.P564H	1.000	superfamily_ARM-type_fold	pfam_CLASP_N_dom,superfamily_ARM-type_fold	-	no_errors	CLASP2	HGNC	ENSG00000163539	tier1	-	-	90	0	0.00	88	6	6.38
CLASP2	0	genome.wustl.edu	37	3	33648229	33648229	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	3	33648229	33648229	G	T	SNP	CLASP2	ENST00000399362	human	ensembl	74_37	-1	known	missense	c.1548	p.N516K	1.000	pfam_CLASP_N_dom,superfamily_ARM-type_fold	pfam_CLASP_N_dom,pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	CLASP2	HGNC	ENSG00000163539				20	0	0.00	38	4	9.52
CLMN	0	genome.wustl.edu	37	14	95662883	95662883	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	14	95662883	95662883	G	T	SNP	CLMN	ENST00000298912	human	ensembl	74_37	-1	known	missense	c.2660	p.S887Y	0.996	NULL	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	CLMN	HGNC	ENSG00000165959				58	0	0.00	75	4	5.06
COL12A1	0	genome.wustl.edu	37	6	75860877	75860877	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	6	75860877	75860877	C	G	SNP	COL12A1	ENST00000322507	human	ensembl	74_37	-1	known	missense	c.4127	p.C1376S	1.000	smart_VWF_A	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799	tier1	-	-	64	0	0.00	52	19	26.76
COL12A1	0	genome.wustl.edu	37	6	75860877	75860877	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	6	75860877	75860877	C	G	SNP	COL12A1	ENST00000322507	human	ensembl	74_37	-1	known	missense	c.4127	p.C1376S	1.000	smart_VWF_A	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799	tier1	-	-	88	0	0.00	52	19	26.76
COL6A5	0	genome.wustl.edu	37	3	130107894	130107894	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	3	130107894	130107894	G	A	SNP	COL6A5	ENST00000265379	human	ensembl	74_37	+1	known	missense	c.2333	p.S778N	0.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A5	HGNC	ENSG00000172752				17	0	0.00	33	3	8.33
COLGALT2	0	genome.wustl.edu	37	1	183920226	183920226	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	183920226	183920226	G	A	SNP	COLGALT2	ENST00000361927	human	ensembl	74_37	-1	known	missense	c.1051	p.R351C	1.000	pfam_Glyco_trans_25	pfam_Glyco_trans_25	-	no_errors	COLGALT2	HGNC	ENSG00000198756	tier1	-	-	26	0	0.00	20	6	23.08
COLGALT2	0	genome.wustl.edu	37	1	183920226	183920226	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	183920226	183920226	G	A	SNP	COLGALT2	ENST00000361927	human	ensembl	74_37	-1	known	missense	c.1051	p.R351C	1.000	pfam_Glyco_trans_25	pfam_Glyco_trans_25	-	no_errors	COLGALT2	HGNC	ENSG00000198756	tier1	-	-	41	0	0.00	20	6	23.08
CPA5	0	genome.wustl.edu	37	7	129986353	129986353	+	Silent	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	7	129986353	129986353	G	A	SNP	CPA5	ENST00000355388	human	ensembl	74_37	+1	known	silent	c.27	p.T9	0.000	NULL	pfam_Peptidase_M14,pfam_Prot_inh_M14A,superfamily_Prot_inh_propept,smart_Peptidase_M14,prints_Peptidase_M14	-	no_errors	CPA5	HGNC	ENSG00000158525	tier1	-	-	16	0	0.00	23	12	34.29
CPA5	0	genome.wustl.edu	37	7	129986353	129986353	+	Silent	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	7	129986353	129986353	G	A	SNP	CPA5	ENST00000355388	human	ensembl	74_37	+1	known	silent	c.27	p.T9	0.000	NULL	pfam_Peptidase_M14,pfam_Prot_inh_M14A,superfamily_Prot_inh_propept,smart_Peptidase_M14,prints_Peptidase_M14	-	no_errors	CPA5	HGNC	ENSG00000158525	tier1	-	-	32	0	0.00	23	12	34.29
CRK	0	genome.wustl.edu	37	17	1340045	1340045	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	17	1340045	1340045	G	T	SNP	CRK	ENST00000300574	human	ensembl	74_37	-1	known	missense	c.646	p.P216T	1.000	superfamily_SH3_domain	pfam_SH3_2,pfam_SH2,pfam_SH3_domain,superfamily_SH3_domain,smart_SH2,smart_SH3_domain,pfscan_SH2,pfscan_SH3_domain,prints_SH2,prints_SH3_domain	-	no_errors	CRK	HGNC	ENSG00000167193				33	0	0.00	42	3	6.67
CSMD2	0	genome.wustl.edu	37	1	34123643	34123643	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	34123643	34123643	C	G	SNP	CSMD2	ENST00000373381	human	ensembl	74_37	-1	known	missense	c.4350	p.Q1450H	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD2	HGNC	ENSG00000121904				10	0	0.00	27	3	10.00
CYB5R1	0	genome.wustl.edu	37	1	202932829	202932829	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	202932829	202932829	G	A	SNP	CYB5R1	ENST00000367249	human	ensembl	74_37	-1	known	missense	c.586	p.R196W	1.000	pfam_OxRdtase_FAD/NAD-bd,prints_NADH-Cyt_B5_reductase,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Phe_hydroxylase	pfam_OxRdtase_FAD/NAD-bd,pfam_OxRdtase_FAD-bd_dom,superfamily_Riboflavin_synthase-like_b-brl,prints_NADH-Cyt_B5_reductase,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Phe_hydroxylase	-	no_errors	CYB5R1	HGNC	ENSG00000159348	tier1	-	-	56	0	0.00	69	31	31.00
CYB5R1	0	genome.wustl.edu	37	1	202932829	202932829	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	202932829	202932829	G	A	SNP	CYB5R1	ENST00000367249	human	ensembl	74_37	-1	known	missense	c.586	p.R196W	1.000	pfam_OxRdtase_FAD/NAD-bd,prints_NADH-Cyt_B5_reductase,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Phe_hydroxylase	pfam_OxRdtase_FAD/NAD-bd,pfam_OxRdtase_FAD-bd_dom,superfamily_Riboflavin_synthase-like_b-brl,prints_NADH-Cyt_B5_reductase,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Phe_hydroxylase	-	no_errors	CYB5R1	HGNC	ENSG00000159348	tier1	-	-	95	0	0.00	69	31	31.00
CYP2G1P	0	genome.wustl.edu	37	19	41397873	41397873	+	RNA	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	19	41397873	41397873	C	A	SNP	CYP2G1P	ENST00000252909	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	CYP2G1P	HGNC	ENSG00000130612	tier1	-	-	14	0	0.00	13	6	31.58
CYP2G1P	0	genome.wustl.edu	37	19	41397874	41397874	+	RNA	SNP	T	T	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	19	41397874	41397874	T	C	SNP	CYP2G1P	ENST00000252909	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CYP2G1P	HGNC	ENSG00000130612	tier1	-	-	15	0	0.00	13	6	31.58
DCAF7	0	genome.wustl.edu	37	17	61670951	61670951	+	RNA	SNP	T	T	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	17	61670951	61670951	T	C	SNP	DCAF7	ENST00000577702	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.213	-	-	-	no_errors	DCAF7	HGNC	ENSG00000136485	tier1	-	-	10	0	0.00	22	5	18.52
DCAF7	0	genome.wustl.edu	37	17	61670951	61670951	+	RNA	SNP	T	T	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	17	61670951	61670951	T	C	SNP	DCAF7	ENST00000577702	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.213	-	-	-	no_errors	DCAF7	HGNC	ENSG00000136485	tier1	-	-	12	0	0.00	22	5	18.52
DCHS1	0	genome.wustl.edu	37	11	6648765	6648765	+	Silent	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	11	6648765	6648765	G	T	SNP	DCHS1	ENST00000299441	human	ensembl	74_37	-1	known	silent	c.5505	p.L1835	0.995	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	DCHS1	HGNC	ENSG00000166341	tier1	-	-	17	0	0.00	9	3	25.00
DCHS1	0	genome.wustl.edu	37	11	6648765	6648765	+	Silent	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	11	6648765	6648765	G	T	SNP	DCHS1	ENST00000299441	human	ensembl	74_37	-1	known	silent	c.5505	p.L1835	0.995	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	DCHS1	HGNC	ENSG00000166341	tier1	-	-	20	0	0.00	9	3	25.00
DGAT1	0	genome.wustl.edu	37	8	145540826	145540827	+	RNA	DEL	CA	CA	-			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	8	145540826	145540827	CA	-	DEL	DGAT1	ENST00000527438	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000:0.001	-	-	-	no_errors	DGAT1	HGNC	ENSG00000185000	tier1			36	0	0.00	37	3	7.50
DISP1	0	genome.wustl.edu	37	1	223116506	223116506	+	Nonsense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	223116506	223116506	C	A	SNP	DISP1	ENST00000360254	human	ensembl	74_37	+1	putative	nonsense	c.341	p.S114*	0.998	NULL	NULL	-	no_errors	DISP1	HGNC	ENSG00000154309				8	0	0.00	37	2	5.13
DNAH12	0	genome.wustl.edu	37	3	57327764	57327764	+	RNA	DEL	T	T	-			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	3	57327764	57327764	T	-	DEL	DNAH12	ENST00000462713	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	DNAH12	HGNC	ENSG00000174844	tier1			11	0	0.00	24	3	11.11
DNAH5	0	genome.wustl.edu	37	5	13809266	13809266	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	5	13809266	13809266	G	T	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	missense	c.7639	p.Q2547K	0.998	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139	tier1	-	-	53	0	0.00	61	4	6.15
DNAH5	0	genome.wustl.edu	37	5	13809266	13809266	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	5	13809266	13809266	G	T	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	missense	c.7639	p.Q2547K	0.998	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139	tier1	-	-	57	0	0.00	61	4	6.15
DNAH9	0	genome.wustl.edu	37	17	11711078	11711078	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	17	11711078	11711078	C	A	SNP	DNAH9	ENST00000262442	human	ensembl	74_37	+1	known	missense	c.8450	p.P2817Q	0.999	superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH9	HGNC	ENSG00000007174	tier1	-	-	25	0	0.00	28	4	12.50
DNAH9	0	genome.wustl.edu	37	17	11711078	11711078	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	17	11711078	11711078	C	A	SNP	DNAH9	ENST00000262442	human	ensembl	74_37	+1	known	missense	c.8450	p.P2817Q	0.999	superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH9	HGNC	ENSG00000007174	tier1	-	-	36	0	0.00	28	4	12.50
DNAJB7	0	genome.wustl.edu	37	22	41257207	41257207	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	22	41257207	41257207	G	T	SNP	DNAJB7	ENST00000307221	human	ensembl	74_37	-1	known	missense	c.792	p.D264E	0.009	NULL	pfam_DnaJ_domain,superfamily_DnaJ_domain,superfamily_ConA-like_lec_gl_sf,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJB7	HGNC	ENSG00000172404	tier1	-	-	52	0	0.00	62	4	6.06
DNM1P47	0	genome.wustl.edu	37	15	102299973	102299973	+	RNA	SNP	T	T	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	15	102299973	102299973	T	C	SNP	DNM1P47	ENST00000561463	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	DNM1P47	HGNC	ENSG00000259660	tier1	-	-	53	0	0.00	94	11	10.48
DYNLT3	0	genome.wustl.edu	37	X	37706325	37706325	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	X	37706325	37706325	C	T	SNP	DYNLT3	ENST00000432389	human	ensembl	74_37	-1	known	missense	c.19	p.V7I	0.000	NULL	pfam_Tctex	-	no_errors	DYNLT3	HGNC	ENSG00000165169	tier1	-	-	43	0	0.00	65	23	26.14
DYNLT3	0	genome.wustl.edu	37	X	37706325	37706325	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	X	37706325	37706325	C	T	SNP	DYNLT3	ENST00000432389	human	ensembl	74_37	-1	known	missense	c.19	p.V7I	0.000	NULL	pfam_Tctex	-	no_errors	DYNLT3	HGNC	ENSG00000165169	tier1	-	-	80	0	0.00	65	23	26.14
DYRK3	0	genome.wustl.edu	37	1	206821626	206821626	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	206821626	206821626	C	A	SNP	DYRK3	ENST00000367109	human	ensembl	74_37	+1	known	missense	c.1083	p.F361L	0.482	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	DYRK3	HGNC	ENSG00000143479				19	0	0.00	31	2	6.06
EBF1	0	genome.wustl.edu	37	5	158125829	158125830	+	RNA	INS	-	-	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	5	158125829	158125830	-	A	INS	EBF1	ENST00000518323	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.815:0.002	-	-	-	no_errors	EBF1	HGNC	ENSG00000164330	tier1			26	0	0.00	46	5	9.80
EDC4	0	genome.wustl.edu	37	16	67912946	67912946	+	Silent	SNP	T	T	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	16	67912946	67912946	T	C	SNP	EDC4	ENST00000358933	human	ensembl	74_37	+1	known	silent	c.1374	p.P458	0.708	NULL	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EDC4	HGNC	ENSG00000038358				19	0	0.00	15	2	11.76
EDEM1	0	genome.wustl.edu	37	3	5241344	5241344	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	3	5241344	5241344	A	C	SNP	EDEM1	ENST00000256497	human	ensembl	74_37	+1	known	missense	c.650	p.K217T	0.999	pfam_Glyco_hydro_47,superfamily_Glyco_hydro_47	pfam_Glyco_hydro_47,superfamily_Glyco_hydro_47,prints_Glyco_hydro_47	-	no_errors	EDEM1	HGNC	ENSG00000134109	tier1	-	-	67	0	0.00	67	35	34.31
EDEM1	0	genome.wustl.edu	37	3	5241344	5241344	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	3	5241344	5241344	A	C	SNP	EDEM1	ENST00000256497	human	ensembl	74_37	+1	known	missense	c.650	p.K217T	0.999	pfam_Glyco_hydro_47,superfamily_Glyco_hydro_47	pfam_Glyco_hydro_47,superfamily_Glyco_hydro_47,prints_Glyco_hydro_47	-	no_errors	EDEM1	HGNC	ENSG00000134109	tier1	-	-	89	0	0.00	67	35	34.31
EMC10	0	genome.wustl.edu	37	19	50985132	50985132	+	Frame_Shift_Del	DEL	G	G	-			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	19	50985132	50985132	G	-	DEL	EMC10	ENST00000376918	human	ensembl	74_37	+1	known	frame_shift_del	c.693	p.A234fs	1.000	NULL	NULL	-	no_errors	EMC10	HGNC	ENSG00000161671	tier1			33	0	0.00	29	2	6.45
ENSG00000221130	0	genome.wustl.edu	37	11	88845972	88845972	+	RNA	SNP	T	T	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	11	88845972	88845972	T	C	SNP	ENSG00000221130	ENST00000408203	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.081	-	-	-	no_errors	AP001482.1	Clone_based_ensembl_gene	ENSG00000221130	tier1	-	-	39	0	0.00	59	5	7.81
ENSG00000226200	0	genome.wustl.edu	37	10	52389979	52389979	+	RNA	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	10	52389979	52389979	C	A	SNP	ENSG00000226200	ENST00000443374	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.184	-	-	-	no_errors	RP11-50E11.3	Clone_based_vega_gene	ENSG00000226200	tier1	-	-	42	0	0.00	68	4	5.56
ENSG00000226200	0	genome.wustl.edu	37	10	52389979	52389979	+	RNA	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	10	52389979	52389979	C	A	SNP	ENSG00000226200	ENST00000443374	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.184	-	-	-	no_errors	RP11-50E11.3	Clone_based_vega_gene	ENSG00000226200	tier1	-	-	60	0	0.00	68	4	5.56
ENSG00000228925	0	genome.wustl.edu	37	2	47134824	47134824	+	RNA	SNP	T	T	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	47134824	47134824	T	C	SNP	ENSG00000228925	ENST00000429761	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.211	-	-	-	no_errors	AC016722.4	Clone_based_vega_gene	ENSG00000228925	tier1	-	-	14	0	0.00	30	6	16.67
ENSG00000228925	0	genome.wustl.edu	37	2	47134824	47134824	+	RNA	SNP	T	T	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	47134824	47134824	T	C	SNP	ENSG00000228925	ENST00000429761	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.211	-	-	-	no_errors	AC016722.4	Clone_based_vega_gene	ENSG00000228925	tier1	-	-	28	0	0.00	30	6	16.67
ENSG00000232274	0	genome.wustl.edu	37	1	143210585	143210585	+	RNA	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	143210585	143210585	G	A	SNP	ENSG00000232274	ENST00000412204	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-782C8.2	Clone_based_vega_gene	ENSG00000232274	tier1	rs202055740	-	24	0	0.00	43	10	18.87
ENSG00000232274	0	genome.wustl.edu	37	1	143210585	143210585	+	RNA	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	143210585	143210585	G	A	SNP	ENSG00000232274	ENST00000412204	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-782C8.2	Clone_based_vega_gene	ENSG00000232274	tier1	rs202055740	-	35	0	0.00	43	10	18.87
ENSG00000236233	0	genome.wustl.edu	37	9	67793687	67793688	+	RNA	INS	-	-	CACA			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	9	67793687	67793688	-	CACA	INS	ENSG00000236233	ENST00000315762	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.071:0.072	-	-	-	no_errors	RP11-12A20.7	Clone_based_vega_gene	ENSG00000236233	tier1			9	0	0.00	5	3	37.50
ENSG00000237452	0	genome.wustl.edu	37	19	46260508	46260508	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	19	46260508	46260508	G	T	SNP	ENSG00000237452	ENST00000457052	human	ensembl	74_37	+1	putative	missense	c.985	p.A329S	0.337	NULL	pfam_HMG_box_dom,pfam_bHLH_dom,superfamily_HMG_box_dom,superfamily_bHLH_dom,smart_HMG_box_dom,pfscan_bHLH_dom,pfscan_HMG_box_dom	-	no_errors	AC074212.3	Clone_based_vega_gene	ENSG00000237452	tier1	-	-	35	0	0.00	20	3	13.04
ENSG00000237452	0	genome.wustl.edu	37	19	46262720	46262720	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	19	46262720	46262720	C	A	SNP	ENSG00000237452	ENST00000457052	human	ensembl	74_37	+1	putative	missense	c.1217	p.A406D	0.021	NULL	pfam_HMG_box_dom,pfam_bHLH_dom,superfamily_HMG_box_dom,superfamily_bHLH_dom,smart_HMG_box_dom,pfscan_bHLH_dom,pfscan_HMG_box_dom	-	no_errors	AC074212.3	Clone_based_vega_gene	ENSG00000237452	tier1	-	-	38	0	0.00	32	17	34.00
ENSG00000237452	0	genome.wustl.edu	37	19	46262720	46262720	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	19	46262720	46262720	C	A	SNP	ENSG00000237452	ENST00000457052	human	ensembl	74_37	+1	putative	missense	c.1217	p.A406D	0.021	NULL	pfam_HMG_box_dom,pfam_bHLH_dom,superfamily_HMG_box_dom,superfamily_bHLH_dom,smart_HMG_box_dom,pfscan_bHLH_dom,pfscan_HMG_box_dom	-	no_errors	AC074212.3	Clone_based_vega_gene	ENSG00000237452	tier1	-	-	46	0	0.00	32	17	34.00
ENSG00000237480	0	genome.wustl.edu	37	1	106623839	106623839	+	RNA	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	106623839	106623839	G	A	SNP	ENSG00000237480	ENST00000429608	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.981	-	-	-	no_errors	RP5-947P14.1	Clone_based_vega_gene	ENSG00000237480	tier1	-	-	38	0	0.00	56	8	12.50
ENSG00000237480	0	genome.wustl.edu	37	1	106623839	106623839	+	RNA	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	106623839	106623839	G	A	SNP	ENSG00000237480	ENST00000429608	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.981	-	-	-	no_errors	RP5-947P14.1	Clone_based_vega_gene	ENSG00000237480	tier1	-	-	53	0	0.00	56	8	12.50
ENSG00000260121	0	genome.wustl.edu	37	16	88785881	88785881	+	RNA	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	16	88785881	88785881	G	T	SNP	ENSG00000260121	ENST00000564984	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP5-1142A6.9	Clone_based_vega_gene	ENSG00000260121	tier1	-	-	27	0	0.00	31	4	11.43
ENSG00000260121	0	genome.wustl.edu	37	16	88785881	88785881	+	RNA	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	16	88785881	88785881	G	T	SNP	ENSG00000260121	ENST00000564984	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP5-1142A6.9	Clone_based_vega_gene	ENSG00000260121	tier1	-	-	32	0	0.00	31	4	11.43
ENSG00000260803	0	genome.wustl.edu	37	16	81862	81862	+	RNA	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	16	81862	81862	C	T	SNP	ENSG00000260803	ENST00000568710	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.057	-	-	-	no_errors	Z84812.4	Clone_based_vega_gene	ENSG00000260803	tier1	-	-	164	0	0.00	78	32	29.09
ENSG00000260803	0	genome.wustl.edu	37	16	81862	81862	+	RNA	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	16	81862	81862	C	T	SNP	ENSG00000260803	ENST00000568710	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.057	-	-	-	no_errors	Z84812.4	Clone_based_vega_gene	ENSG00000260803	tier1	-	-	82	0	0.00	78	32	29.09
ENSG00000271880	0	genome.wustl.edu	37	10	88743656	88743656	+	RNA	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	10	88743656	88743656	G	T	SNP	ENSG00000271880	ENST00000433214	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	RP11-96C23.5	Clone_based_vega_gene	ENSG00000271880	tier1	-	-	20	0	0.00	30	7	18.42
ENSG00000271880	0	genome.wustl.edu	37	10	88743656	88743656	+	RNA	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	10	88743656	88743656	G	T	SNP	ENSG00000271880	ENST00000433214	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	RP11-96C23.5	Clone_based_vega_gene	ENSG00000271880	tier1	-	-	21	0	0.00	30	7	18.42
EPN1	0	genome.wustl.edu	37	19	56200681	56200681	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	19	56200681	56200681	G	A	SNP	EPN1	ENST00000270460	human	ensembl	74_37	+1	known	missense	c.622	p.E208K	0.994	pfam_Ubiquitin-int_motif,smart_Ubiquitin-int_motif,pfscan_Ubiquitin-int_motif	pfam_Epsin_dom_N,pfam_Ubiquitin-int_motif,pfam_ANTH_dom,superfamily_ENTH_VHS,smart_Epsin-like_N,smart_Ubiquitin-int_motif,pfscan_Epsin-like_N,pfscan_Ubiquitin-int_motif	-	no_errors	EPN1	HGNC	ENSG00000063245	tier1	-	-	33	0	0.00	53	4	7.02
EPN1	0	genome.wustl.edu	37	19	56200681	56200681	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	19	56200681	56200681	G	A	SNP	EPN1	ENST00000270460	human	ensembl	74_37	+1	known	missense	c.622	p.E208K	0.994	pfam_Ubiquitin-int_motif,smart_Ubiquitin-int_motif,pfscan_Ubiquitin-int_motif	pfam_Epsin_dom_N,pfam_Ubiquitin-int_motif,pfam_ANTH_dom,superfamily_ENTH_VHS,smart_Epsin-like_N,smart_Ubiquitin-int_motif,pfscan_Epsin-like_N,pfscan_Ubiquitin-int_motif	-	no_errors	EPN1	HGNC	ENSG00000063245	tier1	-	-	70	0	0.00	53	4	7.02
ERC2	0	genome.wustl.edu	37	3	56183042	56183042	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	3	56183042	56183042	T	C	SNP	ERC2	ENST00000288221	human	ensembl	74_37	-1	known	missense	c.1268	p.E423G	1.000	pfam_CAZ_cplx_RIM-bd_prot	pfam_CAZ_cplx_RIM-bd_prot,superfamily_Prefoldin	-	no_errors	ERC2	HGNC	ENSG00000187672	tier1	-	-	42	0	0.00	64	4	5.88
ERCC6L2	0	genome.wustl.edu	37	9	98735292	98735292	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	9	98735292	98735292	C	A	SNP	ERCC6L2	ENST00000407474	human	ensembl	74_37	+1	known	missense	c.202	p.P68T	0.628	NULL	NULL	-	no_errors	ERCC6L2	HGNC	ENSG00000182150	tier1	-	-	47	0	0.00	79	6	7.06
ERCC6L2	0	genome.wustl.edu	37	9	98735292	98735292	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	9	98735292	98735292	C	A	SNP	ERCC6L2	ENST00000407474	human	ensembl	74_37	+1	known	missense	c.202	p.P68T	0.628	NULL	NULL	-	no_errors	ERCC6L2	HGNC	ENSG00000182150	tier1	-	-	55	0	0.00	79	6	7.06
EVL	0	genome.wustl.edu	37	14	100603921	100603921	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	14	100603921	100603921	G	T	SNP	EVL	ENST00000392920	human	ensembl	74_37	+1	known	missense	c.971	p.G324V	0.998	pirsf_Vasodilator_phosphoprotein	pfam_WH1/EVH1,pfam_VASP_tetra,smart_WH1/EVH1,pirsf_Vasodilator_phosphoprotein,pfscan_WH1/EVH1	-	no_errors	EVL	HGNC	ENSG00000196405	tier1	-	-	47	0	0.00	42	18	30.00
EVL	0	genome.wustl.edu	37	14	100603921	100603921	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	14	100603921	100603921	G	T	SNP	EVL	ENST00000392920	human	ensembl	74_37	+1	known	missense	c.971	p.G324V	0.998	pirsf_Vasodilator_phosphoprotein	pfam_WH1/EVH1,pfam_VASP_tetra,smart_WH1/EVH1,pirsf_Vasodilator_phosphoprotein,pfscan_WH1/EVH1	-	no_errors	EVL	HGNC	ENSG00000196405	tier1	-	-	82	0	0.00	42	18	30.00
EVX1	0	genome.wustl.edu	37	7	27284773	27284773	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	7	27284773	27284773	C	T	SNP	EVX1	ENST00000222761	human	ensembl	74_37	+1	putative	missense	c.479	p.A160V	0.999	NULL	NULL	-	no_errors	EVX1	HGNC	ENSG00000106038	tier1	-	-	43	0	0.00	36	20	35.71
F13B	0	genome.wustl.edu	37	1	197026309	197026309	+	Silent	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	197026309	197026309	G	T	SNP	F13B	ENST00000367412	human	ensembl	74_37	-1	known	silent	c.1005	p.A335	0.018	superfamily_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	F13B	HGNC	ENSG00000143278				18	0	0.00	37	3	7.50
FAM155A	0	genome.wustl.edu	37	13	108518661	108518661	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	13	108518661	108518661	T	C	SNP	FAM155A	ENST00000375915	human	ensembl	74_37	-1	known	missense	c.284	p.Q95R	0.996	NULL	NULL	-	no_errors	FAM155A	HGNC	ENSG00000204442				27	0	0.00	28	2	6.67
FAM182B	0	genome.wustl.edu	37	20	25848629	25848629	+	RNA	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	20	25848629	25848629	C	T	SNP	FAM182B	ENST00000424021	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	FAM182B	HGNC	ENSG00000175170	tier1	-	-	49	0	0.00	74	10	11.90
FAM19A2	0	genome.wustl.edu	37	12	62147482	62147485	+	Frame_Shift_Del	DEL	AGAC	AGAC	-			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	AGAC	AGAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	12	62147482	62147485	AGAC	-	DEL	FAM19A2	ENST00000416284	human	ensembl	74_37	-1	known	frame_shift_del	c.305_302	p.C101fs	1.000:1.000:1.000:1.000	pfam_Chemokine-like_FAM19A2	pfam_Chemokine-like_FAM19A2	-	no_errors	FAM19A2	HGNC	ENSG00000198673	tier1			56	0	0.00	42	13	23.64
FAM228B	0	genome.wustl.edu	37	2	24392364	24392365	+	RNA	INS	-	-	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	24392364	24392365	-	A	INS	FAM228B	ENST00000468799	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	FAM228B	HGNC	ENSG00000219626	tier1			10	0	0.00	18	2	10.00
FAM228B	0	genome.wustl.edu	37	2	24392364	24392365	+	RNA	INS	-	-	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	24392364	24392365	-	A	INS	FAM228B	ENST00000468799	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	FAM228B	HGNC	ENSG00000219626	tier1			12	0	0.00	18	2	10.00
FAM65C	0	genome.wustl.edu	37	20	49218951	49218951	+	Silent	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	20	49218951	49218951	G	A	SNP	FAM65C	ENST00000535356	human	ensembl	74_37	-1	known	silent	c.1317	p.H439	0.000	NULL	superfamily_ARM-type_fold,superfamily_Chemokine_IL8-like_dom	-	no_errors	FAM65C	HGNC	ENSG00000042062	tier1	-	-	44	0	0.00	54	17	23.94
FAM65C	0	genome.wustl.edu	37	20	49218951	49218951	+	Silent	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	20	49218951	49218951	G	A	SNP	FAM65C	ENST00000535356	human	ensembl	74_37	-1	known	silent	c.1317	p.H439	0.000	NULL	superfamily_ARM-type_fold,superfamily_Chemokine_IL8-like_dom	-	no_errors	FAM65C	HGNC	ENSG00000042062	tier1	-	-	63	0	0.00	54	17	23.94
FAM71E2	0	genome.wustl.edu	37	19	55870036	55870036	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	19	55870036	55870036	T	C	SNP	FAM71E2	ENST00000424985	human	ensembl	74_37	-1	novel	missense	c.2200	p.M734V	0.000	NULL	pfam_DUF3699	-	no_errors	FAM71E2	HGNC	ENSG00000180043	tier1	-	-	33	0	0.00	48	15	23.81
FGF12	0	genome.wustl.edu	37	3	192125875	192125875	+	Silent	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	3	192125875	192125875	G	A	SNP	FGF12	ENST00000454309	human	ensembl	74_37	-1	known	silent	c.138	p.L46	1.000	NULL	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam,prints_Fibroblast_GF_fam	-	no_errors	FGF12	HGNC	ENSG00000114279	tier1	-	-	57	0	0.00	86	19	18.10
FGF12	0	genome.wustl.edu	37	3	192125875	192125875	+	Silent	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	3	192125875	192125875	G	A	SNP	FGF12	ENST00000454309	human	ensembl	74_37	-1	known	silent	c.138	p.L46	1.000	NULL	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam,prints_Fibroblast_GF_fam	-	no_errors	FGF12	HGNC	ENSG00000114279	tier1	-	-	60	0	0.00	86	19	18.10
FMNL3	0	genome.wustl.edu	37	12	50044560	50044560	+	Silent	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	12	50044560	50044560	G	T	SNP	FMNL3	ENST00000293590	human	ensembl	74_37	-1	known	silent	c.1899	p.A633	1.000	pfam_FH2_Formin,smart_FH2_Formin	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	FMNL3	HGNC	ENSG00000161791				25	0	0.00	39	4	9.30
FNDC3A	0	genome.wustl.edu	37	13	49765251	49765251	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	13	49765251	49765251	G	T	SNP	FNDC3A	ENST00000492622	human	ensembl	74_37	+1	known	missense	c.2045	p.R682L	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	FNDC3A	HGNC	ENSG00000102531	tier1	-	-	46	0	0.00	27	3	10.00
FOLH1	0	genome.wustl.edu	37	11	49204790	49204790	+	Silent	SNP	A	A	G			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	11	49204790	49204790	A	G	SNP	FOLH1	ENST00000256999	human	ensembl	74_37	-1	known	silent	c.831	p.Y277	1.000	NULL	pfam_TFR-like_dimer_dom,pfam_Protease-assoc_domain,pfam_Peptidase_M28,superfamily_TFR-like_dimer_dom	-	no_errors	FOLH1	HGNC	ENSG00000086205	tier1	rs76509850	-	52	0	0.00	61	4	6.15
FUK	0	genome.wustl.edu	37	16	70504248	70504248	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	16	70504248	70504248	G	T	SNP	FUK	ENST00000378912	human	ensembl	74_37	+1	known	missense	c.1083	p.M361I	1.000	pfam_Fucokinase	pfam_Fucokinase,pfam_GHMP_kinase_C_dom,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_Trimer_LpxA-like,prints_Galkinase	-	no_errors	FUK	HGNC	ENSG00000157353				19	0	0.00	28	2	6.67
G6PC3	0	genome.wustl.edu	37	17	42153360	42153360	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	17	42153360	42153360	G	T	SNP	G6PC3	ENST00000269097	human	ensembl	74_37	+1	known	missense	c.990	p.W330C	0.926	pirsf_Glucose-6-phosphatase	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase,pirsf_Glucose-6-phosphatase	-	no_errors	G6PC3	HGNC	ENSG00000141349	tier1	-	-	33	0	0.00	47	5	9.62
G6PC3	0	genome.wustl.edu	37	17	42153360	42153360	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	17	42153360	42153360	G	T	SNP	G6PC3	ENST00000269097	human	ensembl	74_37	+1	known	missense	c.990	p.W330C	0.926	pirsf_Glucose-6-phosphatase	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase,pirsf_Glucose-6-phosphatase	-	no_errors	G6PC3	HGNC	ENSG00000141349	tier1	-	-	35	0	0.00	47	5	9.62
GABRG3	0	genome.wustl.edu	37	15	27572012	27572012	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	15	27572012	27572012	C	A	SNP	GABRG3	ENST00000333743	human	ensembl	74_37	+1	known	missense	c.327	p.F109L	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,prints_GABAAa_rcpt,prints_Neur_channel,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABBAg_rcpt,prints_GABAA_rcpt,prints_GABBAg3_rcpt,prints_GABAAa_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GABRG3	HGNC	ENSG00000182256				27	0	0.00	57	3	5.00
GART	0	genome.wustl.edu	37	21	34877881	34877881	+	Silent	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	21	34877881	34877881	G	T	SNP	GART	ENST00000381815	human	ensembl	74_37	-1	known	silent	c.2712	p.V904	0.980	pfam_Formyl_transf_N,superfamily_Formyl_transf_N,tigrfam_PurN_trans	pfam_PRibGlycinamid_synth_ATP-grasp,pfam_Formyl_transf_N,pfam_PRibGlycinamide_synth_N,pfam_AIR_synth_C_dom,pfam_PRibGlycinamide_synth_C-dom,pfam_AIR_synth_N_dom,pfam_ATP-grasp_carboxylate-amine,pfam_CbamoylP_synth_lsu-like_ATP-bd,superfamily_Formyl_transf_N,superfamily_AIR_synth_C_dom,superfamily_PurM_N-like,superfamily_PreATP-grasp_dom,superfamily_Rudment_hybrid_motif,pfscan_ATP-grasp,tigrfam_PRibGlycinamide_synth,tigrfam_PurM_cligase,tigrfam_PurN_trans	-	no_errors	GART	HGNC	ENSG00000159131				21	0	0.00	30	4	11.76
GIGYF1	0	genome.wustl.edu	37	7	100285684	100285684	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	7	100285684	100285684	G	T	SNP	GIGYF1	ENST00000275732	human	ensembl	74_37	-1	known	missense	c.85	p.P29T	1.000	NULL	pfam_GYF,superfamily_GYF,smart_GYF,pfscan_GYF	-	no_errors	GIGYF1	HGNC	ENSG00000146830				23	0	0.00	38	2	5.00
GIGYF2	0	genome.wustl.edu	37	2	233651859	233651859	+	Splice_Site	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	233651859	233651859	G	T	SNP	GIGYF2	ENST00000373566	human	ensembl	74_37	+1	known	splice_site	c.599-1	e8-1	1.000	-	-	-	no_errors	GIGYF2	HGNC	ENSG00000204120				34	0	0.00	54	3	5.26
GLI2	0	genome.wustl.edu	37	2	121744178	121744178	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	121744178	121744178	C	A	SNP	GLI2	ENST00000361492	human	ensembl	74_37	+1	known	missense	c.2281	p.L761I	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI2	HGNC	ENSG00000074047	tier1	-	-	32	0	0.00	45	4	8.16
GLIPR2	0	genome.wustl.edu	37	9	36147790	36147790	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	9	36147790	36147790	A	T	SNP	GLIPR2	ENST00000377960	human	ensembl	74_37	+1	known	missense	c.21	p.K7N	1.000	superfamily_CAP_domain	pfam_CAP_domain,superfamily_CAP_domain,smart_Allrgn_V5/Tpx1,prints_Allrgn_V5/Tpx1	-	no_errors	GLIPR2	HGNC	ENSG00000122694	tier1	-	-	22	0	0.00	26	13	33.33
GLYATL1	0	genome.wustl.edu	37	11	58714634	58714634	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	11	58714634	58714634	T	C	SNP	GLYATL1	ENST00000317391	human	ensembl	74_37	+1	known	missense	c.74	p.L25P	0.006	pfam_Glycine_N-acyltransferase_N	pfam_Glycine_N-acyltransferase_N,pfam_Glycine_N-acyltransferase_C,superfamily_Acyl_CoA_acyltransferase	-	no_errors	GLYATL1	HGNC	ENSG00000166840	tier1	-	-	25	0	0.00	32	14	30.43
GLYATL1	0	genome.wustl.edu	37	11	58714634	58714634	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	11	58714634	58714634	T	C	SNP	GLYATL1	ENST00000317391	human	ensembl	74_37	+1	known	missense	c.74	p.L25P	0.006	pfam_Glycine_N-acyltransferase_N	pfam_Glycine_N-acyltransferase_N,pfam_Glycine_N-acyltransferase_C,superfamily_Acyl_CoA_acyltransferase	-	no_errors	GLYATL1	HGNC	ENSG00000166840	tier1	-	-	43	0	0.00	32	14	30.43
GNAI2	0	genome.wustl.edu	37	3	50296411	50296411	+	RNA	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	3	50296411	50296411	C	A	SNP	GNAI2	ENST00000491100	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GNAI2	HGNC	ENSG00000114353	tier1	-	-	16	0	0.00	25	10	28.57
GNAI2	0	genome.wustl.edu	37	3	50296411	50296411	+	RNA	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	3	50296411	50296411	C	A	SNP	GNAI2	ENST00000491100	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GNAI2	HGNC	ENSG00000114353	tier1	-	-	25	0	0.00	25	10	28.57
GNAS	0	genome.wustl.edu	37	20	57428501	57428501	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	20	57428501	57428501	G	A	SNP	GNAS	ENST00000371100	human	ensembl	74_37	+1	putative	missense	c.181	p.V61I	0.000	NULL	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_S,prints_Gprotein_alpha_su	-	no_errors	GNAS	HGNC	ENSG00000087460	tier1	-	-	16	0	0.00	27	9	25.00
GNAS	0	genome.wustl.edu	37	20	57428501	57428501	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	20	57428501	57428501	G	A	SNP	GNAS	ENST00000371100	human	ensembl	74_37	+1	putative	missense	c.181	p.V61I	0.000	NULL	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_S,prints_Gprotein_alpha_su	-	no_errors	GNAS	HGNC	ENSG00000087460	tier1	-	-	31	0	0.00	27	9	25.00
GNL3L	0	genome.wustl.edu	37	X	54578109	54578109	+	Silent	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	X	54578109	54578109	C	T	SNP	GNL3L	ENST00000336470	human	ensembl	74_37	+1	known	silent	c.972	p.H324	0.271	NULL	pfam_GTP_binding_domain,pfam_Fe2_transport_prot_B_N,superfamily_P-loop_NTPase,prints_GTP_binding_domain	-	no_errors	GNL3L	HGNC	ENSG00000130119	tier1	-	-	52	0	0.00	41	23	35.94
GOLPH3L	0	genome.wustl.edu	37	1	150621108	150621108	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	150621108	150621108	A	T	SNP	GOLPH3L	ENST00000271732	human	ensembl	74_37	-1	known	missense	c.547	p.F183I	0.998	pfam_GPP34	pfam_GPP34	-	no_errors	GOLPH3L	HGNC	ENSG00000143457	tier1	-	-	16	0	0.00	26	8	23.53
GOLPH3L	0	genome.wustl.edu	37	1	150621108	150621108	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	150621108	150621108	A	T	SNP	GOLPH3L	ENST00000271732	human	ensembl	74_37	-1	known	missense	c.547	p.F183I	0.998	pfam_GPP34	pfam_GPP34	-	no_errors	GOLPH3L	HGNC	ENSG00000143457	tier1	-	-	22	0	0.00	26	8	23.53
GPR98	0	genome.wustl.edu	37	5	90106558	90106558	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	5	90106558	90106558	C	A	SNP	GPR98	ENST00000405460	human	ensembl	74_37	+1	known	missense	c.15481	p.L5161I	0.002	NULL	pfam_Calx_beta,pfam_EPTP,pfam_GPCR_2_secretin-like,pfam_GPS_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Gal_Oxase/kelch_b-propeller,smart_Calx_beta,pfscan_EAR,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR98	HGNC	ENSG00000164199	tier1	-	-	32	0	0.00	34	8	19.05
GPR98	0	genome.wustl.edu	37	5	90106558	90106558	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	5	90106558	90106558	C	A	SNP	GPR98	ENST00000405460	human	ensembl	74_37	+1	known	missense	c.15481	p.L5161I	0.002	NULL	pfam_Calx_beta,pfam_EPTP,pfam_GPCR_2_secretin-like,pfam_GPS_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Gal_Oxase/kelch_b-propeller,smart_Calx_beta,pfscan_EAR,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR98	HGNC	ENSG00000164199	tier1	-	-	35	0	0.00	34	8	19.05
GRIK3	0	genome.wustl.edu	37	1	37271817	37271817	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	37271817	37271817	G	T	SNP	GRIK3	ENST00000373091	human	ensembl	74_37	-1	known	nonsense	c.2202	p.Y734*	1.000	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK3	HGNC	ENSG00000163873				32	0	0.00	38	2	5.00
GSN	0	genome.wustl.edu	37	9	124074856	124074857	+	RNA	INS	-	-	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	9	124074856	124074857	-	A	INS	GSN	ENST00000485767	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003:0.000	-	-	-	no_errors	GSN	HGNC	ENSG00000148180	tier1			13	0	0.00	10	4	28.57
GUCY1A2	0	genome.wustl.edu	37	11	106558335	106558335	+	Silent	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	11	106558335	106558335	C	T	SNP	GUCY1A2	ENST00000282249	human	ensembl	74_37	-1	known	silent	c.2232	p.S744	0.594	superfamily_A/G_cyclase	pfam_Haem_no_assoc-bd,pfam_A/G_cyclase,pfam_Heme_NO-bd,superfamily_A/G_cyclase,superfamily_NO_sig/Golgi_transp_ligand-bd,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	GUCY1A2	HGNC	ENSG00000152402	tier1	-	-	50	0	0.00	51	27	34.62
GUCY1A2	0	genome.wustl.edu	37	11	106558335	106558335	+	Silent	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	11	106558335	106558335	C	T	SNP	GUCY1A2	ENST00000282249	human	ensembl	74_37	-1	known	silent	c.2232	p.S744	0.594	superfamily_A/G_cyclase	pfam_Haem_no_assoc-bd,pfam_A/G_cyclase,pfam_Heme_NO-bd,superfamily_A/G_cyclase,superfamily_NO_sig/Golgi_transp_ligand-bd,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	GUCY1A2	HGNC	ENSG00000152402	tier1	-	-	74	0	0.00	51	27	34.62
H2AFX	0	genome.wustl.edu	37	11	118965783	118965783	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	11	118965783	118965783	C	A	SNP	H2AFX	ENST00000375167	human	ensembl	74_37	-1	known	missense	c.322	p.V108F	1.000	superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	-	no_errors	H2AFX	HGNC	ENSG00000188486				48	0	0.00	56	3	5.08
HARBI1	0	genome.wustl.edu	37	11	46625423	46625423	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	11	46625423	46625423	G	T	SNP	HARBI1	ENST00000326737	human	ensembl	74_37	-1	known	missense	c.707	p.T236N	1.000	pfam_Harbinger_derived_prot_plant	pfam_Harbinger_derived_prot_plant	-	no_errors	HARBI1	HGNC	ENSG00000180423				10	0	0.00	25	4	13.79
HDLBP	0	genome.wustl.edu	37	2	242192401	242192401	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	242192401	242192401	C	G	SNP	HDLBP	ENST00000310931	human	ensembl	74_37	-1	known	missense	c.1343	p.R448T	1.000	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	HDLBP	HGNC	ENSG00000115677	tier1	-	-	37	0	0.00	37	4	9.76
HIST1H1D	0	genome.wustl.edu	37	6	26234794	26234794	+	Frame_Shift_Del	DEL	T	T	-			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	6	26234794	26234794	T	-	DEL	HIST1H1D	ENST00000244534	human	ensembl	74_37	-1	known	frame_shift_del	c.368	p.K123fs	0.994	NULL	pfam_Histone_H1/H5_H15,smart_Histone_H1/H5_H15,prints_Histone_H5	-	no_errors	HIST1H1D	HGNC	ENSG00000124575	tier1			27	0	0.00	25	3	10.71
HIST1H2AB	0	genome.wustl.edu	37	6	26033431	26033432	+	Frame_Shift_Ins	INS	-	-	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	6	26033431	26033432	-	T	INS	HIST1H2AB	ENST00000259791	human	ensembl	74_37	-1	known	frame_shift_ins	c.366_365	p.S123fs	1.000:1.000	superfamily_Histone-fold,smart_Histone_H2A	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	-	no_errors	HIST1H2AB	HGNC	ENSG00000137259	tier1			34	0	0.00	44	16	26.67
HIST1H2AC	0	genome.wustl.edu	37	6	26124548	26124548	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	6	26124548	26124548	C	T	SNP	HIST1H2AC	ENST00000314088	human	ensembl	74_37	+1	known	nonsense	c.88	p.R30*	1.000	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	-	no_errors	HIST1H2AC	HGNC	ENSG00000180573	tier1	-	-	50	0	0.00	46	14	23.33
HNRNPL	0	genome.wustl.edu	37	19	39330958	39330959	+	Frame_Shift_Ins	INS	-	-	G			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	19	39330958	39330959	-	G	INS	HNRNPL	ENST00000221419	human	ensembl	74_37	-1	known	frame_shift_ins	c.1011_1010	p.P338fs	1.000:1.000	tigrfam_HnRNP-L_PTB	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP-L_PTB	-	no_errors	HNRNPL	HGNC	ENSG00000104824	tier1			20	0	0.00	46	17	26.98
HPSE2	0	genome.wustl.edu	37	10	100219489	100219489	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	10	100219489	100219489	G	T	SNP	HPSE2	ENST00000370552	human	ensembl	74_37	-1	known	missense	c.1621	p.Q541K	1.000	NULL	pfam_Glyco_hydro_79,superfamily_Glycoside_hydrolase_SF	-	no_errors	HPSE2	HGNC	ENSG00000172987				17	0	0.00	19	2	9.52
HSPA2	0	genome.wustl.edu	37	14	65008192	65008192	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	14	65008192	65008192	G	T	SNP	HSPA2	ENST00000247207	human	ensembl	74_37	+1	known	missense	c.625	p.D209Y	1.000	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPA2	HGNC	ENSG00000126803	tier1	-	-	49	0	0.00	54	4	6.90
HSPA9	0	genome.wustl.edu	37	5	137895634	137895634	+	Silent	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	5	137895634	137895634	C	T	SNP	HSPA9	ENST00000297185	human	ensembl	74_37	-1	known	silent	c.1329	p.L443	0.822	pfam_Hsp_70_fam,prints_Hsp_70_fam,tigrfam_Chaperone_DnaK	pfam_Hsp_70_fam,pfam_MreB_Mrl,pfam_Carb_kinase_FGGY_C,prints_Hsp_70_fam,tigrfam_Chaperone_DnaK	-	no_errors	HSPA9	HGNC	ENSG00000113013	tier1	-	-	56	0	0.00	53	18	25.35
HSPA9	0	genome.wustl.edu	37	5	137895634	137895634	+	Silent	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	5	137895634	137895634	C	T	SNP	HSPA9	ENST00000297185	human	ensembl	74_37	-1	known	silent	c.1329	p.L443	0.822	pfam_Hsp_70_fam,prints_Hsp_70_fam,tigrfam_Chaperone_DnaK	pfam_Hsp_70_fam,pfam_MreB_Mrl,pfam_Carb_kinase_FGGY_C,prints_Hsp_70_fam,tigrfam_Chaperone_DnaK	-	no_errors	HSPA9	HGNC	ENSG00000113013	tier1	-	-	85	0	0.00	53	18	25.35
IDS	0	genome.wustl.edu	37	X	148571894	148571894	+	Silent	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	X	148571894	148571894	G	A	SNP	IDS	ENST00000340855	human	ensembl	74_37	-1	known	silent	c.957	p.D319	0.997	pfam_Sulfatase,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	pfam_Sulfatase,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	-	no_errors	IDS	HGNC	ENSG00000010404	tier1	-	-	43	0	0.00	55	4	6.78
IDS	0	genome.wustl.edu	37	X	148571894	148571894	+	Silent	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	X	148571894	148571894	G	A	SNP	IDS	ENST00000340855	human	ensembl	74_37	-1	known	silent	c.957	p.D319	0.997	pfam_Sulfatase,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	pfam_Sulfatase,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	-	no_errors	IDS	HGNC	ENSG00000010404	tier1	-	-	46	0	0.00	55	4	6.78
IFI16	0	genome.wustl.edu	37	1	158986377	158986377	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	158986377	158986377	G	C	SNP	IFI16	ENST00000295809	human	ensembl	74_37	+1	known	missense	c.436	p.E146Q	0.000	NULL	pfam_HIN200/IF120x,pfam_DAPIN,superfamily_DEATH-like_dom,pfscan_DAPIN,pfscan_HIN200/IF120x	-	no_errors	IFI16	HGNC	ENSG00000163565	tier1	-	-	39	0	0.00	74	8	9.76
IFI16	0	genome.wustl.edu	37	1	158986377	158986377	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	158986377	158986377	G	C	SNP	IFI16	ENST00000295809	human	ensembl	74_37	+1	known	missense	c.436	p.E146Q	0.000	NULL	pfam_HIN200/IF120x,pfam_DAPIN,superfamily_DEATH-like_dom,pfscan_DAPIN,pfscan_HIN200/IF120x	-	no_errors	IFI16	HGNC	ENSG00000163565	tier1	-	-	68	0	0.00	74	8	9.76
IL1RAPL1	0	genome.wustl.edu	37	X	29417387	29417387	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	X	29417387	29417387	G	T	SNP	IL1RAPL1	ENST00000302196	human	ensembl	74_37	+1	known	missense	c.665	p.G222V	1.000	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_TIR_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_TIR_dom,smart_Ig_sub,smart_Ig_sub2,smart_TIR_dom,pfscan_TIR_dom,pfscan_Ig-like_dom	-	no_errors	IL1RAPL1	HGNC	ENSG00000169306	tier1	-	-	126	0	0.00	122	35	22.29
IL1RAPL1	0	genome.wustl.edu	37	X	29417387	29417387	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	X	29417387	29417387	G	T	SNP	IL1RAPL1	ENST00000302196	human	ensembl	74_37	+1	known	missense	c.665	p.G222V	1.000	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_TIR_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_TIR_dom,smart_Ig_sub,smart_Ig_sub2,smart_TIR_dom,pfscan_TIR_dom,pfscan_Ig-like_dom	-	no_errors	IL1RAPL1	HGNC	ENSG00000169306	tier1	-	-	97	0	0.00	122	35	22.29
IL9	0	genome.wustl.edu	37	5	135228158	135228158	+	Silent	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	5	135228158	135228158	G	T	SNP	IL9	ENST00000274520	human	ensembl	74_37	-1	known	silent	c.357	p.G119	0.964	pfam_IL-7/IL-9_fam,prints_IL-9	pfam_IL-7/IL-9_fam,prints_IL-9	-	no_errors	IL9	HGNC	ENSG00000145839				67	0	0.00	88	5	5.38
IST1	0	genome.wustl.edu	37	16	71961715	71961715	+	Nonstop_Mutation	SNP	A	A	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	16	71961715	71961715	A	T	SNP	IST1	ENST00000535424	human	ensembl	74_37	+1	known	nonstop	c.1139	p.*380L	1.000	NULL	pfam_DUF292_euk	-	no_errors	IST1	HGNC	ENSG00000182149	tier1	-	-	39	0	0.00	37	5	11.90
ITGB3	0	genome.wustl.edu	37	17	45369758	45369758	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	17	45369758	45369758	G	T	SNP	ITGB3	ENST00000559488	human	ensembl	74_37	+1	known	missense	c.1514	p.R505L	0.493	pirsf_Integrin_bsu	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,pfam_Integrin_bsu_cyt_dom,pfam_Integrin_bsu_tail,pfam_EGF_extracell,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like_fold,smart_Integrin_bsu_N,prints_Integrin_bsu	-	no_errors	ITGB3	HGNC	ENSG00000259207				14	0	0.00	25	3	10.71
JSRP1	0	genome.wustl.edu	37	19	2252589	2252589	+	Silent	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	19	2252589	2252589	C	T	SNP	JSRP1	ENST00000300961	human	ensembl	74_37	-1	known	silent	c.735	p.P245	0.000	NULL	NULL	-	no_errors	JSRP1	HGNC	ENSG00000167476	tier1	-	-	44	0	0.00	38	17	30.91
JSRP1	0	genome.wustl.edu	37	19	2252589	2252589	+	Silent	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	19	2252589	2252589	C	T	SNP	JSRP1	ENST00000300961	human	ensembl	74_37	-1	known	silent	c.735	p.P245	0.000	NULL	NULL	-	no_errors	JSRP1	HGNC	ENSG00000167476	tier1	-	-	56	0	0.00	38	17	30.91
JUNB	0	genome.wustl.edu	37	19	12903518	12903518	+	Silent	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	19	12903518	12903518	G	T	SNP	JUNB	ENST00000302754	human	ensembl	74_37	+1	known	silent	c.933	p.S311	0.849	pfam_bZIP,smart_bZIP,pfscan_bZIP,prints_Leuzip_Jun	pfam_JNK,pfam_bZIP,superfamily_TF_DNA-bd,smart_bZIP,pfscan_bZIP,prints_Leuzip_Jun	-	no_errors	JUNB	HGNC	ENSG00000171223				40	0	0.00	50	3	5.66
KCNA5	0	genome.wustl.edu	37	12	5154047	5154047	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	12	5154047	5154047	G	C	SNP	KCNA5	ENST00000252321	human	ensembl	74_37	+1	known	missense	c.734	p.S245T	1.000	prints_K_chnl,prints_K_chnl_volt-dep_Kv1	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,pfam_PKD1_2_channel,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1.5,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNA5	HGNC	ENSG00000130037	tier1	-	-	49	0	0.00	47	17	26.56
KCNA5	0	genome.wustl.edu	37	12	5154047	5154047	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	12	5154047	5154047	G	C	SNP	KCNA5	ENST00000252321	human	ensembl	74_37	+1	known	missense	c.734	p.S245T	1.000	prints_K_chnl,prints_K_chnl_volt-dep_Kv1	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,pfam_PKD1_2_channel,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1.5,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNA5	HGNC	ENSG00000130037	tier1	-	-	86	0	0.00	47	17	26.56
KCNQ4	0	genome.wustl.edu	37	1	41285870	41285870	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	41285870	41285870	C	A	SNP	KCNQ4	ENST00000347132	human	ensembl	74_37	+1	known	missense	c.979	p.Q327K	1.000	NULL	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ4	HGNC	ENSG00000117013	tier1	-	-	25	0	0.00	17	6	26.09
KCNQ4	0	genome.wustl.edu	37	1	41285870	41285870	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	41285870	41285870	C	A	SNP	KCNQ4	ENST00000347132	human	ensembl	74_37	+1	known	missense	c.979	p.Q327K	1.000	NULL	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ4	HGNC	ENSG00000117013	tier1	-	-	29	0	0.00	17	6	26.09
KCTD8	0	genome.wustl.edu	37	4	44449989	44449989	+	Silent	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	4	44449989	44449989	G	T	SNP	KCTD8	ENST00000360029	human	ensembl	74_37	-1	known	silent	c.552	p.A184	0.245	NULL	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	-	no_errors	KCTD8	HGNC	ENSG00000183783				13	0	0.00	21	13	38.24
KDM2B	0	genome.wustl.edu	37	12	121951122	121951122	+	Silent	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	12	121951122	121951122	G	T	SNP	KDM2B	ENST00000377071	human	ensembl	74_37	-1	known	silent	c.1131	p.R377	0.996	NULL	pfam_Znf_CXXC,pfam_F-box_dom,pfam_JmjC_dom,superfamily_Znf_FYVE_PHD,smart_JmjC_dom,smart_Znf_PHD,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_JmjC_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	KDM2B	HGNC	ENSG00000089094	tier1	-	-	59	0	0.00	73	4	5.19
KIAA1107	0	genome.wustl.edu	37	1	92642741	92642743	+	In_Frame_Del	DEL	CAG	CAG	-			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	CAG	CAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	92642741	92642743	CAG	-	DEL	KIAA1107	ENST00000409154	human	ensembl	74_37	+1	known	in_frame_del	c.842_844	p.A285in_frame_del	0.001:0.000:0.004	NULL	NULL	-	no_errors	KIAA1107	HGNC	ENSG00000069712	tier1			24	0	0.00	38	6	13.64
KIAA1107	0	genome.wustl.edu	37	1	92642741	92642743	+	In_Frame_Del	DEL	CAG	CAG	-			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	CAG	CAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	92642741	92642743	CAG	-	DEL	KIAA1107	ENST00000409154	human	ensembl	74_37	+1	known	in_frame_del	c.842_844	p.A285in_frame_del	0.001:0.000:0.004	NULL	NULL	-	no_errors	KIAA1107	HGNC	ENSG00000069712	tier1			35	0	0.00	38	6	13.64
KIF1B	0	genome.wustl.edu	37	1	10364302	10364302	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	10364302	10364302	G	T	SNP	KIF1B	ENST00000377083	human	ensembl	74_37	+1	known	missense	c.3059	p.W1020L	1.000	NULL	pfam_Kinesin_motor_dom,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,pfscan_FHA_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF1B	HGNC	ENSG00000054523	tier1	-	-	56	0	0.00	51	4	7.27
KIF1B	0	genome.wustl.edu	37	1	10364302	10364302	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	10364302	10364302	G	T	SNP	KIF1B	ENST00000377083	human	ensembl	74_37	+1	known	missense	c.3059	p.W1020L	1.000	NULL	pfam_Kinesin_motor_dom,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,pfscan_FHA_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF1B	HGNC	ENSG00000054523	tier1	-	-	64	0	0.00	51	4	7.27
KIF2B	0	genome.wustl.edu	37	17	51900977	51900977	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	17	51900977	51900977	C	T	SNP	KIF2B	ENST00000268919	human	ensembl	74_37	+1	known	missense	c.583	p.R195C	1.000	superfamily_P-loop_NTPase	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF2B	HGNC	ENSG00000141200	tier1	-	-	28	0	0.00	33	7	17.50
KIF2B	0	genome.wustl.edu	37	17	51900977	51900977	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	17	51900977	51900977	C	T	SNP	KIF2B	ENST00000268919	human	ensembl	74_37	+1	known	missense	c.583	p.R195C	1.000	superfamily_P-loop_NTPase	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF2B	HGNC	ENSG00000141200	tier1	-	-	38	0	0.00	33	7	17.50
KIT	0	genome.wustl.edu	37	4	55564477	55564477	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	4	55564477	55564477	G	A	SNP	KIT	ENST00000288135	human	ensembl	74_37	+1	known	missense	c.365	p.R122H	0.000	pirsf_Tyr_kinase_CSF1/PDGF_rcpt	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	KIT	HGNC	ENSG00000157404				39	0	0.00	49	3	5.77
KLHDC10	0	genome.wustl.edu	37	7	129756388	129756388	+	Silent	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	7	129756388	129756388	G	T	SNP	KLHDC10	ENST00000335420	human	ensembl	74_37	+1	known	silent	c.357	p.G119	1.000	pfam_Kelch_1	pfam_Kelch_1,pfam_Kelch_2,smart_Kelch_1	-	no_errors	KLHDC10	HGNC	ENSG00000128607	tier1	-	-	51	0	0.00	48	4	7.69
KLHL1	0	genome.wustl.edu	37	13	70681620	70681620	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	13	70681620	70681620	T	A	SNP	KLHL1	ENST00000377844	human	ensembl	74_37	-1	known	missense	c.212	p.K71M	0.982	NULL	pfam_Kelch_1,pfam_Kelch_2,pfam_BACK,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pfscan_BTB/POZ-like	-	no_errors	KLHL1	HGNC	ENSG00000150361	tier1	-	-	35	0	0.00	45	18	28.57
KLHL28	0	genome.wustl.edu	37	14	45400541	45400541	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	14	45400541	45400541	C	A	SNP	KLHL28	ENST00000396128	human	ensembl	74_37	-1	known	missense	c.1547	p.R516I	1.000	pfam_Kelch_1,pfam_Kelch_2,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL28	HGNC	ENSG00000179454				36	0	0.00	42	3	6.67
KMT2E	0	genome.wustl.edu	37	7	104717408	104717408	+	Splice_Site	SNP	A	A	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	7	104717408	104717408	A	T	SNP	KMT2E	ENST00000257745	human	ensembl	74_37	+1	known	splice_site	c.769-2	e8-2	1.000	-	-	-	no_errors	KMT2E	HGNC	ENSG00000005483				18	0	0.00	27	2	6.90
KREMEN1	0	genome.wustl.edu	37	22	29534726	29534726	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	22	29534726	29534726	A	G	SNP	KREMEN1	ENST00000327813	human	ensembl	74_37	+1	known	missense	c.1079	p.Y360C	1.000	pirsf_Kremen	pirsf_Kremen,pfam_Kringle,pfam_WSC_carb-bd,pfam_CUB_dom,superfamily_Kringle-like,superfamily_CUB_dom,superfamily_Scorpion_toxin-like,smart_Kringle,smart_WSC_carb-bd_subgr,smart_CUB_dom,pfscan_CUB_dom,pfscan_Kringle,pfscan_WSC_carb-bd	-	no_errors	KREMEN1	HGNC	ENSG00000183762	tier1	-	-	73	0	0.00	69	29	29.29
KRT85	0	genome.wustl.edu	37	12	52757081	52757081	+	Silent	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	12	52757081	52757081	G	A	SNP	KRT85	ENST00000257901	human	ensembl	74_37	-1	known	silent	c.900	p.D300	0.833	pfam_IF	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT85	HGNC	ENSG00000135443	tier1	-	-	38	0	0.00	35	23	39.66
KRT85	0	genome.wustl.edu	37	12	52757081	52757081	+	Silent	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	12	52757081	52757081	G	A	SNP	KRT85	ENST00000257901	human	ensembl	74_37	-1	known	silent	c.900	p.D300	0.833	pfam_IF	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT85	HGNC	ENSG00000135443	tier1	-	-	81	0	0.00	35	23	39.66
KRTAP13-2	0	genome.wustl.edu	37	21	31744209	31744209	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	21	31744209	31744209	C	T	SNP	KRTAP13-2	ENST00000399889	human	ensembl	74_37	-1	known	missense	c.323	p.R108H	0.009	pfam_KRTAP_PMG	pfam_KRTAP_PMG	-	no_errors	KRTAP13-2	HGNC	ENSG00000182816				34	0	0.00	49	3	5.77
LAIR2	0	genome.wustl.edu	37	19	55019195	55019195	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	19	55019195	55019195	G	T	SNP	LAIR2	ENST00000301202	human	ensembl	74_37	+1	known	missense	c.160	p.G54W	0.000	smart_Ig_sub	smart_Ig_sub	-	no_errors	LAIR2	HGNC	ENSG00000167618	tier1	-	-	29	0	0.00	24	13	35.14
LAMA4	0	genome.wustl.edu	37	6	112462605	112462605	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	6	112462605	112462605	G	T	SNP	LAMA4	ENST00000230538	human	ensembl	74_37	-1	known	missense	c.2768	p.P923H	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_Laminin_I,pfam_Laminin_II,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Focal_adhesion_kin_target_dom,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Laminin_G	-	no_errors	LAMA4	HGNC	ENSG00000112769	tier1	-	-	27	0	0.00	42	4	8.70
LAMA4	0	genome.wustl.edu	37	6	112462605	112462605	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	6	112462605	112462605	G	T	SNP	LAMA4	ENST00000230538	human	ensembl	74_37	-1	known	missense	c.2768	p.P923H	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_Laminin_I,pfam_Laminin_II,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Focal_adhesion_kin_target_dom,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Laminin_G	-	no_errors	LAMA4	HGNC	ENSG00000112769	tier1	-	-	40	0	0.00	42	4	8.70
LAMC1	0	genome.wustl.edu	37	1	183094558	183094558	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	183094558	183094558	A	T	SNP	LAMC1	ENST00000258341	human	ensembl	74_37	+1	known	missense	c.2674	p.M892L	0.002	pfam_EGF_laminin,smart_EGF_laminin,pfscan_EGF_laminin	pfam_Laminin_N,pfam_EGF_laminin,pfam_Laminin_B_type_IV,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMC1	HGNC	ENSG00000135862	tier1	-	-	40	0	0.00	36	17	32.08
LAMC1	0	genome.wustl.edu	37	1	183094558	183094558	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	183094558	183094558	A	T	SNP	LAMC1	ENST00000258341	human	ensembl	74_37	+1	known	missense	c.2674	p.M892L	0.002	pfam_EGF_laminin,smart_EGF_laminin,pfscan_EGF_laminin	pfam_Laminin_N,pfam_EGF_laminin,pfam_Laminin_B_type_IV,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMC1	HGNC	ENSG00000135862	tier1	-	-	83	0	0.00	36	17	32.08
LAS1L	0	genome.wustl.edu	37	X	64738220	64738220	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	X	64738220	64738220	A	G	SNP	LAS1L	ENST00000374811	human	ensembl	74_37	-1	known	missense	c.1574	p.I525T	0.000	NULL	pfam_Las1	-	no_errors	LAS1L	HGNC	ENSG00000001497	tier1	-	-	36	0	0.00	35	10	22.22
LAT	0	genome.wustl.edu	37	16	28997469	28997469	+	Silent	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	16	28997469	28997469	C	A	SNP	LAT	ENST00000395461	human	ensembl	74_37	+1	known	silent	c.285	p.P95	0.000	NULL	prints_Linker_for_activat_Tcells_prot	-	no_errors	LAT	HGNC	ENSG00000213658	tier1	-	-	41	0	0.00	29	4	12.12
LCP2	0	genome.wustl.edu	37	5	169685150	169685150	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	5	169685150	169685150	G	T	SNP	LCP2	ENST00000046794	human	ensembl	74_37	-1	known	missense	c.991	p.Q331K	1.000	NULL	pfam_SH2,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,smart_SH2,pfscan_SH2	-	no_errors	LCP2	HGNC	ENSG00000043462				26	0	0.00	39	3	7.14
LOC100190940	0	genome.wustl.edu	37	12	130521234	130521235	+	RNA	INS	-	-	AA			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	12	130521234	130521235	-	AA	INS	LOC100190940	ENST00000291374	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.029:0.046	-	-	-	no_errors	RP11-474D1.3	Clone_based_vega_gene	ENSG00000214039	tier1			10	0	0.00	10	4	28.57
LOXL4	0	genome.wustl.edu	37	10	100020863	100020863	+	Silent	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	10	100020863	100020863	G	T	SNP	LOXL4	ENST00000260702	human	ensembl	74_37	-1	known	silent	c.478	p.R160	1.000	superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR	pfam_Lysyl_oxidase,pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_Lysyl_oxidase,prints_SRCR	-	no_errors	LOXL4	HGNC	ENSG00000138131	tier1	-	-	41	0	0.00	36	8	18.18
LRP1B	0	genome.wustl.edu	37	2	142012201	142012201	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	142012201	142012201	G	T	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	missense	c.353	p.S118Y	0.027	superfamily_Growth_fac_rcpt_N_dom	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702				18	0	0.00	37	2	5.13
LRRIQ1	0	genome.wustl.edu	37	12	85638646	85638646	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	12	85638646	85638646	A	G	SNP	LRRIQ1	ENST00000393217	human	ensembl	74_37	+1	known	missense	c.5096	p.E1699G	1.000	NULL	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,smart_Leu-rich_rpt_typical-subtyp,pfscan_IQ_motif_EF-hand-BS	-	no_errors	LRRIQ1	HGNC	ENSG00000133640				16	0	0.00	21	3	6.12
LTBP1	0	genome.wustl.edu	37	2	33359997	33359997	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	33359997	33359997	G	A	SNP	LTBP1	ENST00000354476	human	ensembl	74_37	+1	known	missense	c.1171	p.D391N	1.000	NULL	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,pfam_EG-like_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	LTBP1	HGNC	ENSG00000049323	tier1	-	-	18	0	0.00	29	14	32.56
LTBP1	0	genome.wustl.edu	37	2	33359997	33359997	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	33359997	33359997	G	A	SNP	LTBP1	ENST00000354476	human	ensembl	74_37	+1	known	missense	c.1171	p.D391N	1.000	NULL	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,pfam_EG-like_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	LTBP1	HGNC	ENSG00000049323	tier1	-	-	31	0	0.00	29	14	32.56
MAGEB6	0	genome.wustl.edu	37	X	26212570	26212570	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	X	26212570	26212570	G	T	SNP	MAGEB6	ENST00000379034	human	ensembl	74_37	+1	known	missense	c.607	p.A203S	0.000	pfscan_MAGE	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEB6	HGNC	ENSG00000176746	tier1	-	-	37	0	0.00	70	4	5.33
MAGEB6	0	genome.wustl.edu	37	X	26212570	26212570	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	X	26212570	26212570	G	T	SNP	MAGEB6	ENST00000379034	human	ensembl	74_37	+1	known	missense	c.607	p.A203S	0.000	pfscan_MAGE	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEB6	HGNC	ENSG00000176746	tier1	-	-	61	0	0.00	70	4	5.33
MAGI1-IT1	0	genome.wustl.edu	37	3	65940168	65940168	+	RNA	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	3	65940168	65940168	G	A	SNP	MAGI1-IT1	ENST00000460754	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MAGI1-IT1	HGNC	ENSG00000272610	tier1	-	-	61	0	0.00	61	17	21.79
MAGI1-IT1	0	genome.wustl.edu	37	3	65940168	65940168	+	RNA	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	3	65940168	65940168	G	A	SNP	MAGI1-IT1	ENST00000460754	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MAGI1-IT1	HGNC	ENSG00000272610	tier1	-	-	67	0	0.00	61	17	21.79
MAML2	0	genome.wustl.edu	37	11	95825422	95825422	+	Silent	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	11	95825422	95825422	C	T	SNP	MAML2	ENST00000524717	human	ensembl	74_37	-1	known	silent	c.1773	p.Q591	1.000	NULL	pfam_Neuroggenic_mastermind-like_N	-	no_errors	MAML2	HGNC	ENSG00000184384	tier1	-	-	27	0	0.00	30	6	16.67
MAML2	0	genome.wustl.edu	37	11	95825422	95825422	+	Silent	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	11	95825422	95825422	C	T	SNP	MAML2	ENST00000524717	human	ensembl	74_37	-1	known	silent	c.1773	p.Q591	1.000	NULL	pfam_Neuroggenic_mastermind-like_N	-	no_errors	MAML2	HGNC	ENSG00000184384	tier1	-	-	36	0	0.00	30	6	16.67
MARK1	0	genome.wustl.edu	37	1	220791832	220791832	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	220791832	220791832	G	A	SNP	MARK1	ENST00000366917	human	ensembl	74_37	+1	known	missense	c.733	p.V245I	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_KA1_dom,superfamily_Kinase-like_dom,superfamily_KA1/Ssp2_C,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_UBA/transl_elong_EF1B_N_euk,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom	-	no_errors	MARK1	HGNC	ENSG00000116141	tier1	-	-	46	0	0.00	66	21	24.14
MARK1	0	genome.wustl.edu	37	1	220791832	220791832	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	220791832	220791832	G	A	SNP	MARK1	ENST00000366917	human	ensembl	74_37	+1	known	missense	c.733	p.V245I	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_KA1_dom,superfamily_Kinase-like_dom,superfamily_KA1/Ssp2_C,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_UBA/transl_elong_EF1B_N_euk,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom	-	no_errors	MARK1	HGNC	ENSG00000116141	tier1	-	-	56	0	0.00	66	21	24.14
MEF2C	0	genome.wustl.edu	37	5	88057050	88057050	+	Silent	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	5	88057050	88057050	C	T	SNP	MEF2C	ENST00000437473	human	ensembl	74_37	-1	known	silent	c.354	p.R118	1.000	pfam_HJURP_C	pfam_TF_MADSbox,pfam_HJURP_C,superfamily_TF_MADSbox,smart_TF_MADSbox,prints_TF_MADSbox,pfscan_TF_MADSbox	-	no_errors	MEF2C	HGNC	ENSG00000081189	tier1	-	-	17	0	0.00	21	11	34.38
MEF2C	0	genome.wustl.edu	37	5	88057050	88057050	+	Silent	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	5	88057050	88057050	C	T	SNP	MEF2C	ENST00000437473	human	ensembl	74_37	-1	known	silent	c.354	p.R118	1.000	pfam_HJURP_C	pfam_TF_MADSbox,pfam_HJURP_C,superfamily_TF_MADSbox,smart_TF_MADSbox,prints_TF_MADSbox,pfscan_TF_MADSbox	-	no_errors	MEF2C	HGNC	ENSG00000081189	tier1	-	-	24	0	0.00	21	11	34.38
MFSD11	0	genome.wustl.edu	37	17	74738327	74738327	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	17	74738327	74738327	G	T	SNP	MFSD11	ENST00000336509	human	ensembl	74_37	+1	known	missense	c.409	p.G137W	1.000	pfam_Ion_channel_UNC-93,pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_Ion_channel_UNC-93,pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	MFSD11	HGNC	ENSG00000092931	tier1	-	-	36	0	0.00	73	4	5.19
MFSD11	0	genome.wustl.edu	37	17	74738327	74738327	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	17	74738327	74738327	G	T	SNP	MFSD11	ENST00000336509	human	ensembl	74_37	+1	known	missense	c.409	p.G137W	1.000	pfam_Ion_channel_UNC-93,pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_Ion_channel_UNC-93,pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	MFSD11	HGNC	ENSG00000092931	tier1	-	-	42	0	0.00	73	4	5.19
MGAT4C	0	genome.wustl.edu	37	12	86383258	86383258	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	12	86383258	86383258	G	T	SNP	MGAT4C	ENST00000393205	human	ensembl	74_37	-1	known	missense	c.154	p.R52S	1.000	superfamily_LSM_dom	pfam_Glyco_transf_54,superfamily_LSM_dom	-	no_errors	MGAT4C	HGNC	ENSG00000182050				47	0	0.00	53	3	5.36
MLH1	0	genome.wustl.edu	37	3	37061853	37061853	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	3	37061853	37061853	G	T	SNP	MLH1	ENST00000231790	human	ensembl	74_37	+1	known	nonsense	c.937	p.E313*	1.000	pfam_DNA_mismatch_repair_C,superfamily_Ribosomal_S5_D2-typ_fold,tigrfam_DNA_mismatch_repair_N	pfam_DNA_mismatch_repair_C,pfam_HATPase_ATP-bd,superfamily_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,tigrfam_DNA_mismatch_repair_N	-	no_errors	MLH1	HGNC	ENSG00000076242				46	0	0.00	53	3	5.36
MON2	0	genome.wustl.edu	37	12	62949801	62949801	+	Silent	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	12	62949801	62949801	C	A	SNP	MON2	ENST00000393630	human	ensembl	74_37	+1	known	silent	c.3241	p.R1081	1.000	superfamily_ARM-type_fold	pfam_DUF1981_Sec7_assoc,superfamily_ARM-type_fold	-	no_errors	MON2	HGNC	ENSG00000061987				44	0	0.00	32	2	5.88
MT-ND5	0	genome.wustl.edu	37	MT	13352	13352	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	MT	13352	13352	T	A	SNP	MT-ND5	ENST00000361567	human	ensembl	74_37	+1	known	missense	c.1016	p.L339Q	NULL	pfam_NADH_UbQ/plastoQ_OxRdtase,tigrfam_NADHpl_OxRdtase_5	pfam_NADH_UbQ/plastoQ_OxRdtase,pfam_NADH_DH_su5_C,pfam_NADH_UbQ_OxRdtase_chain5/L_N,tigrfam_NADHpl_OxRdtase_5	-	no_errors	MT-ND5	HGNC	ENSG00000198786	tier1	-	-	10	0	0.00	1	3	75.00
MT-ND5	0	genome.wustl.edu	37	MT	13352	13352	+	Missense_Mutation	SNP	T	T	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	MT	13352	13352	T	A	SNP	MT-ND5	ENST00000361567	human	ensembl	74_37	+1	known	missense	c.1016	p.L339Q	NULL	pfam_NADH_UbQ/plastoQ_OxRdtase,tigrfam_NADHpl_OxRdtase_5	pfam_NADH_UbQ/plastoQ_OxRdtase,pfam_NADH_DH_su5_C,pfam_NADH_UbQ_OxRdtase_chain5/L_N,tigrfam_NADHpl_OxRdtase_5	-	no_errors	MT-ND5	HGNC	ENSG00000198786	tier1	-	-	23	0	0.00	1	3	75.00
MT-RNR1	0	genome.wustl.edu	37	MT	1309	1309	+	RNA	SNP	A	A	G			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	MT	1309	1309	A	G	SNP	MT-RNR1	ENST00000389680	human	ensembl	74_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-RNR1	HGNC	ENSG00000211459	tier1	-	-	11	0	0.00	4	5	55.56
MUC17	0	genome.wustl.edu	37	7	100683921	100683921	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	7	100683921	100683921	G	C	SNP	MUC17	ENST00000306151	human	ensembl	74_37	+1	known	missense	c.9224	p.S3075T	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	MUC17	HGNC	ENSG00000169876	tier1	-	-	142	0	0.00	89	12	11.88
MUC17	0	genome.wustl.edu	37	7	100683921	100683921	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	7	100683921	100683921	G	C	SNP	MUC17	ENST00000306151	human	ensembl	74_37	+1	known	missense	c.9224	p.S3075T	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	MUC17	HGNC	ENSG00000169876	tier1	-	-	75	0	0.00	89	12	11.88
MUC17	0	genome.wustl.edu	37	7	100683929	100683929	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	7	100683929	100683929	G	A	SNP	MUC17	ENST00000306151	human	ensembl	74_37	+1	known	missense	c.9232	p.V3078I	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	MUC17	HGNC	ENSG00000169876				78	0	0.00	84	6	6.67
MUC17	0	genome.wustl.edu	37	7	100683930	100683930	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	7	100683930	100683930	T	C	SNP	MUC17	ENST00000306151	human	ensembl	74_37	+1	known	missense	c.9233	p.V3078A	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	MUC17	HGNC	ENSG00000169876				78	0	0.00	84	6	6.67
MUC17	0	genome.wustl.edu	37	7	100684396	100684396	+	Silent	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	7	100684396	100684396	G	A	SNP	MUC17	ENST00000306151	human	ensembl	74_37	+1	known	silent	c.9699	p.P3233	0.001	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	MUC17	HGNC	ENSG00000169876				57	0	0.00	85	6	6.59
MUC17	0	genome.wustl.edu	37	7	100684404	100684404	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	7	100684404	100684404	G	T	SNP	MUC17	ENST00000306151	human	ensembl	74_37	+1	known	missense	c.9707	p.S3236I	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	MUC17	HGNC	ENSG00000169876				58	0	0.00	84	6	6.67
MUC17	0	genome.wustl.edu	37	7	100684406	100684406	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	7	100684406	100684406	T	C	SNP	MUC17	ENST00000306151	human	ensembl	74_37	+1	known	missense	c.9709	p.S3237P	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	MUC17	HGNC	ENSG00000169876				60	0	0.00	80	7	8.05
MUC17	0	genome.wustl.edu	37	7	100684419	100684419	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	7	100684419	100684419	T	C	SNP	MUC17	ENST00000306151	human	ensembl	74_37	+1	known	missense	c.9722	p.I3241T	0.005	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	MUC17	HGNC	ENSG00000169876				69	0	0.00	77	10	11.49
MUC5B	0	genome.wustl.edu	37	11	1256532	1256532	+	Splice_Site	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	11	1256532	1256532	G	T	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	splice_site	c.2779-1	e23-1	1.000	-	-	-	no_errors	MUC5B	HGNC	ENSG00000117983	tier1	-	-	58	0	0.00	72	4	5.26
MUC5B	0	genome.wustl.edu	37	11	1265962	1265962	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	11	1265962	1265962	G	T	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	missense	c.7861	p.A2621S	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983	tier1	-	-	119	0	0.00	113	59	34.10
MUC5B	0	genome.wustl.edu	37	11	1265962	1265962	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	11	1265962	1265962	G	T	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	missense	c.7861	p.A2621S	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983	tier1	-	-	178	0	0.00	113	59	34.10
MUTYH	0	genome.wustl.edu	37	1	45796970	45796970	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	45796970	45796970	G	T	SNP	MUTYH	ENST00000450313	human	ensembl	74_37	-1	known	missense	c.1360	p.Q454K	1.000	superfamily_NUDIX_hydrolase_dom-like	pfam_HhH-GPD_domain,superfamily_DNA_glycosylase,superfamily_NUDIX_hydrolase_dom-like,smart_HhH-GPD_domain,smart_Endouclease3_FeS-loop_motif	-	no_errors	MUTYH	HGNC	ENSG00000132781	tier1	-	-	58	0	0.00	71	4	5.33
MUTYH	0	genome.wustl.edu	37	1	45796970	45796970	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	45796970	45796970	G	T	SNP	MUTYH	ENST00000450313	human	ensembl	74_37	-1	known	missense	c.1360	p.Q454K	1.000	superfamily_NUDIX_hydrolase_dom-like	pfam_HhH-GPD_domain,superfamily_DNA_glycosylase,superfamily_NUDIX_hydrolase_dom-like,smart_HhH-GPD_domain,smart_Endouclease3_FeS-loop_motif	-	no_errors	MUTYH	HGNC	ENSG00000132781	tier1	-	-	62	0	0.00	71	4	5.33
MX1	0	genome.wustl.edu	37	21	42807878	42807878	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	21	42807878	42807878	G	T	SNP	MX1	ENST00000398598	human	ensembl	74_37	+1	known	missense	c.220	p.A74S	1.000	pfam_Dynamin_GTPase,superfamily_P-loop_NTPase,smart_Dynamin_GTPase,prints_Dynamin_SF	pfam_Dynamin_central,pfam_Dynamin_GTPase,pfam_GED,superfamily_P-loop_NTPase,smart_Dynamin_GTPase,smart_GED,prints_Dynamin_SF	-	no_errors	MX1	HGNC	ENSG00000157601				14	0	0.00	33	3	8.33
MYH15	0	genome.wustl.edu	37	3	108214704	108214704	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	3	108214704	108214704	G	T	SNP	MYH15	ENST00000273353	human	ensembl	74_37	-1	known	missense	c.694	p.Q232K	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_Lambda_DNA-bd_dom,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	-	no_errors	MYH15	HGNC	ENSG00000144821				45	0	0.00	52	4	7.14
MYO1C	0	genome.wustl.edu	37	17	1386153	1386153	+	Splice_Site	SNP	A	A	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	17	1386153	1386153	A	C	SNP	MYO1C	ENST00000359786	human	ensembl	74_37	-1	known	splice_site	c.546+2	e4+2	1.000	-	-	-	no_errors	MYO1C	HGNC	ENSG00000197879				17	0	0.00	23	5	17.86
MYO3A	0	genome.wustl.edu	37	10	26443690	26443690	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	10	26443690	26443690	G	T	SNP	MYO3A	ENST00000265944	human	ensembl	74_37	+1	known	missense	c.2731	p.A911S	0.002	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,pfscan_Prot_kinase_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO3A	HGNC	ENSG00000095777				46	0	0.00	66	4	5.71
NAPEPLD	0	genome.wustl.edu	37	7	102760461	102760461	+	Silent	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	7	102760461	102760461	G	T	SNP	NAPEPLD	ENST00000455523	human	ensembl	74_37	-1	known	silent	c.723	p.S241	0.101	NULL	NULL	-	no_errors	NAPEPLD	HGNC	ENSG00000161048				40	0	0.00	38	3	7.14
NBPF3	0	genome.wustl.edu	37	1	21804677	21804677	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	21804677	21804677	T	C	SNP	NBPF3	ENST00000318249	human	ensembl	74_37	+1	known	missense	c.1033	p.S345P	0.001	pfam_NBPF_dom	pfam_NBPF_dom	-	no_errors	NBPF3	HGNC	ENSG00000142794	tier1	-	-	151	0	0.00	182	52	22.22
NCOR2	0	genome.wustl.edu	37	12	124870324	124870324	+	Silent	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	12	124870324	124870324	G	T	SNP	NCOR2	ENST00000356219	human	ensembl	74_37	-1	known	silent	c.1986	p.L662	0.997	superfamily_Homeodomain-like	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	NCOR2	HGNC	ENSG00000196498				31	0	0.00	31	3	8.82
NDUFS1	0	genome.wustl.edu	37	2	207012367	207012367	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	207012367	207012367	C	T	SNP	NDUFS1	ENST00000455934	human	ensembl	74_37	-1	known	missense	c.481	p.G161R	1.000	pfam_NADH_UbQ_OxRdtase_Gsu_4Fe4S-bd,smart_NADH_UbQ_OxRdtase_Gsu_4Fe4S-bd,tigrfam_NADH_UbQ_OxRdtase_Gsu	pfam_Mopterin_OxRdtase,pfam_NADH_UbQ_OxRdtase_Gsu_4Fe4S-bd,pfam_NuoG_C,pfam_2Fe-2S_ferredoxin-type,superfamily_2Fe-2S_ferredoxin-type,smart_NADH_UbQ_OxRdtase_Gsu_4Fe4S-bd,pfscan_2Fe-2S_ferredoxin-type,tigrfam_NADH_UbQ_OxRdtase_Gsu	-	no_errors	NDUFS1	HGNC	ENSG00000023228	tier1	-	-	50	0	0.00	108	6	5.26
NDUFS1	0	genome.wustl.edu	37	2	207012367	207012367	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	207012367	207012367	C	T	SNP	NDUFS1	ENST00000455934	human	ensembl	74_37	-1	known	missense	c.481	p.G161R	1.000	pfam_NADH_UbQ_OxRdtase_Gsu_4Fe4S-bd,smart_NADH_UbQ_OxRdtase_Gsu_4Fe4S-bd,tigrfam_NADH_UbQ_OxRdtase_Gsu	pfam_Mopterin_OxRdtase,pfam_NADH_UbQ_OxRdtase_Gsu_4Fe4S-bd,pfam_NuoG_C,pfam_2Fe-2S_ferredoxin-type,superfamily_2Fe-2S_ferredoxin-type,smart_NADH_UbQ_OxRdtase_Gsu_4Fe4S-bd,pfscan_2Fe-2S_ferredoxin-type,tigrfam_NADH_UbQ_OxRdtase_Gsu	-	no_errors	NDUFS1	HGNC	ENSG00000023228	tier1	-	-	94	0	0.00	108	6	5.26
NES	0	genome.wustl.edu	37	1	156646344	156646344	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	156646344	156646344	C	T	SNP	NES	ENST00000368223	human	ensembl	74_37	-1	known	missense	c.713	p.R238H	0.788	pfam_IF	pfam_IF	-	no_errors	NES	HGNC	ENSG00000132688	tier1	-	-	54	0	0.00	39	19	32.76
NLRP11	0	genome.wustl.edu	37	19	56329311	56329311	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	19	56329311	56329311	C	T	SNP	NLRP11	ENST00000443188	human	ensembl	74_37	-1	known	missense	c.230	p.R77H	0.000	pfam_DAPIN,superfamily_DEATH-like_dom,pfscan_DAPIN	pfam_DAPIN,superfamily_DEATH-like_dom,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP11	HGNC	ENSG00000179873	tier1	-	-	25	0	0.00	17	10	37.04
NLRP11	0	genome.wustl.edu	37	19	56329311	56329311	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	19	56329311	56329311	C	T	SNP	NLRP11	ENST00000443188	human	ensembl	74_37	-1	known	missense	c.230	p.R77H	0.000	pfam_DAPIN,superfamily_DEATH-like_dom,pfscan_DAPIN	pfam_DAPIN,superfamily_DEATH-like_dom,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP11	HGNC	ENSG00000179873	tier1	-	-	28	0	0.00	17	10	37.04
NLRP8	0	genome.wustl.edu	37	19	56467321	56467321	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	19	56467321	56467321	G	T	SNP	NLRP8	ENST00000291971	human	ensembl	74_37	+1	known	missense	c.1897	p.V633F	0.000	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP8	HGNC	ENSG00000179709	tier1	-	-	36	0	0.00	51	4	7.27
NLRP8	0	genome.wustl.edu	37	19	56467321	56467321	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	19	56467321	56467321	G	T	SNP	NLRP8	ENST00000291971	human	ensembl	74_37	+1	known	missense	c.1897	p.V633F	0.000	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP8	HGNC	ENSG00000179709	tier1	-	-	48	0	0.00	51	4	7.27
NOP14	0	genome.wustl.edu	37	4	2956259	2956259	+	Silent	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	4	2956259	2956259	G	T	SNP	NOP14	ENST00000416614	human	ensembl	74_37	-1	known	silent	c.504	p.G168	0.002	pfam_Nop14	pfam_Nop14	-	no_errors	NOP14	HGNC	ENSG00000087269				32	0	0.00	60	4	6.25
NRXN1	0	genome.wustl.edu	37	2	50758518	50758518	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	50758518	50758518	G	T	SNP	NRXN1	ENST00000402717	human	ensembl	74_37	-1	known	missense	c.2170	p.P724T	1.000	superfamily_ConA-like_lec_gl_sf,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN1	HGNC	ENSG00000179915	tier1	-	-	31	0	0.00	56	4	6.67
NRXN1	0	genome.wustl.edu	37	2	50758518	50758518	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	50758518	50758518	G	T	SNP	NRXN1	ENST00000402717	human	ensembl	74_37	-1	known	missense	c.2170	p.P724T	1.000	superfamily_ConA-like_lec_gl_sf,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN1	HGNC	ENSG00000179915	tier1	-	-	45	0	0.00	56	4	6.67
NSD1	0	genome.wustl.edu	37	5	176678794	176678794	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	5	176678794	176678794	G	T	SNP	NSD1	ENST00000439151	human	ensembl	74_37	+1	known	nonsense	c.4705	p.E1569*	1.000	superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	pfam_PWWP_dom,pfam_SET_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_PWWP_dom,smart_Znf_PHD,smart_AWS,smart_SET_dom,smart_Post-SET_dom,pfscan_AWS,pfscan_PWWP_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger	-	no_errors	NSD1	HGNC	ENSG00000165671	tier1	-	-	53	0	0.00	48	22	31.43
NSD1	0	genome.wustl.edu	37	5	176709523	176709523	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	5	176709523	176709523	C	T	SNP	NSD1	ENST00000439151	human	ensembl	74_37	+1	known	nonsense	c.5950	p.R1984*	1.000	pfam_SET_dom,smart_SET_dom,pfscan_SET_dom	pfam_PWWP_dom,pfam_SET_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_PWWP_dom,smart_Znf_PHD,smart_AWS,smart_SET_dom,smart_Post-SET_dom,pfscan_AWS,pfscan_PWWP_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger	-	no_errors	NSD1	HGNC	ENSG00000165671	tier1	-	-	41	0	0.00	28	8	22.22
NSL1	0	genome.wustl.edu	37	1	212911901	212911901	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	212911901	212911901	G	T	SNP	NSL1	ENST00000366977	human	ensembl	74_37	-1	known	missense	c.695	p.P232H	0.051	NULL	pfam_Kinetochore_Mis14	-	no_errors	NSL1	HGNC	ENSG00000117697	tier1	-	-	57	0	0.00	68	4	5.56
NUP210L	0	genome.wustl.edu	37	1	154061967	154061967	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	154061967	154061967	G	T	SNP	NUP210L	ENST00000368559	human	ensembl	74_37	-1	known	nonsense	c.2291	p.S764*	0.819	NULL	pfam_Big_2,superfamily_Invasin/intimin_cell_adhesion,smart_Big_2	-	no_errors	NUP210L	HGNC	ENSG00000143552	tier1	-	-	43	0	0.00	57	4	6.56
NUP210L	0	genome.wustl.edu	37	1	154061967	154061967	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	154061967	154061967	G	T	SNP	NUP210L	ENST00000368559	human	ensembl	74_37	-1	known	nonsense	c.2291	p.S764*	0.819	NULL	pfam_Big_2,superfamily_Invasin/intimin_cell_adhesion,smart_Big_2	-	no_errors	NUP210L	HGNC	ENSG00000143552	tier1	-	-	67	0	0.00	57	4	6.56
NUTM1	0	genome.wustl.edu	37	15	34648679	34648679	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	15	34648679	34648679	G	A	SNP	NUTM1	ENST00000333756	human	ensembl	74_37	+1	known	missense	c.2386	p.A796T	0.008	NULL	NULL	-	no_errors	NUTM1	HGNC	ENSG00000184507	tier1	-	-	11	0	0.00	21	11	34.38
NUTM1	0	genome.wustl.edu	37	15	34648679	34648679	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	15	34648679	34648679	G	A	SNP	NUTM1	ENST00000333756	human	ensembl	74_37	+1	known	missense	c.2386	p.A796T	0.008	NULL	NULL	-	no_errors	NUTM1	HGNC	ENSG00000184507	tier1	-	-	26	0	0.00	21	11	34.38
OR10G2	0	genome.wustl.edu	37	14	22102857	22102857	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	14	22102857	22102857	G	A	SNP	OR10G2	ENST00000542433	human	ensembl	74_37	-1	known	missense	c.142	p.L48F	0.999	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10G2	HGNC	ENSG00000255582	tier1	-	-	31	0	0.00	61	25	29.07
OR2B6	0	genome.wustl.edu	37	6	27925709	27925709	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	6	27925709	27925709	G	T	SNP	OR2B6	ENST00000244623	human	ensembl	74_37	+1	known	missense	c.691	p.A231S	0.874	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2B6	HGNC	ENSG00000124657	tier1	-	-	32	0	0.00	61	4	6.15
OR2B6	0	genome.wustl.edu	37	6	27925709	27925709	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	6	27925709	27925709	G	T	SNP	OR2B6	ENST00000244623	human	ensembl	74_37	+1	known	missense	c.691	p.A231S	0.874	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2B6	HGNC	ENSG00000124657	tier1	-	-	49	0	0.00	61	4	6.15
OR2G3	0	genome.wustl.edu	37	1	247769044	247769044	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	247769044	247769044	C	A	SNP	OR2G3	ENST00000320002	human	ensembl	74_37	+1	known	missense	c.157	p.P53T	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2G3	HGNC	ENSG00000177476	tier1	-	-	34	0	0.00	33	4	10.81
OR2G3	0	genome.wustl.edu	37	1	247769044	247769044	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	247769044	247769044	C	A	SNP	OR2G3	ENST00000320002	human	ensembl	74_37	+1	known	missense	c.157	p.P53T	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2G3	HGNC	ENSG00000177476	tier1	-	-	47	0	0.00	33	4	10.81
OR4C11	0	genome.wustl.edu	37	11	55371492	55371492	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	11	55371492	55371492	G	A	SNP	OR4C11	ENST00000302231	human	ensembl	74_37	-1	known	missense	c.358	p.R120C	0.999	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C11	HGNC	ENSG00000172188	tier1	rs139149255	-	19	0	0.00	11	22	66.67
OR4C11	0	genome.wustl.edu	37	11	55371492	55371492	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	11	55371492	55371492	G	A	SNP	OR4C11	ENST00000302231	human	ensembl	74_37	-1	known	missense	c.358	p.R120C	0.999	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C11	HGNC	ENSG00000172188	tier1	rs139149255	-	35	0	0.00	11	22	66.67
OR4C5	0	genome.wustl.edu	37	11	48387258	48387258	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	11	48387258	48387258	C	T	SNP	OR4C5	ENST00000319813	human	ensembl	74_37	-1	known	missense	c.760	p.A254T	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C5	HGNC	ENSG00000176540	tier1	rs78030134	-	39	0	0.00	59	8	11.94
OR4C5	0	genome.wustl.edu	37	11	48387262	48387262	+	Silent	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	11	48387262	48387262	G	A	SNP	OR4C5	ENST00000319813	human	ensembl	74_37	-1	known	silent	c.756	p.T252	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C5	HGNC	ENSG00000176540	tier1	rs75430864	-	38	0	0.00	57	8	12.31
OR52E8	0	genome.wustl.edu	37	11	5878582	5878582	+	Silent	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	11	5878582	5878582	C	T	SNP	OR52E8	ENST00000537935	human	ensembl	74_37	-1	known	silent	c.351	p.E117	0.026	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52E8	HGNC	ENSG00000183269	tier1	-	-	62	0	0.00	52	16	23.53
OR52E8	0	genome.wustl.edu	37	11	5878582	5878582	+	Silent	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	11	5878582	5878582	C	T	SNP	OR52E8	ENST00000537935	human	ensembl	74_37	-1	known	silent	c.351	p.E117	0.026	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52E8	HGNC	ENSG00000183269	tier1	-	-	76	0	0.00	52	16	23.53
OSBPL8	0	genome.wustl.edu	37	12	76881290	76881290	+	Silent	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	12	76881290	76881290	C	T	SNP	OSBPL8	ENST00000261183	human	ensembl	74_37	-1	known	silent	c.42	p.S14	1.000	NULL	pfam_Oxysterol-bd,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBPL8	HGNC	ENSG00000091039	tier1	-	-	42	0	0.00	67	4	5.63
OSBPL8	0	genome.wustl.edu	37	12	76881290	76881290	+	Silent	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	12	76881290	76881290	C	T	SNP	OSBPL8	ENST00000261183	human	ensembl	74_37	-1	known	silent	c.42	p.S14	1.000	NULL	pfam_Oxysterol-bd,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBPL8	HGNC	ENSG00000091039	tier1	-	-	69	0	0.00	67	4	5.63
PAMR1	0	genome.wustl.edu	37	11	35492294	35492294	+	Silent	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	11	35492294	35492294	G	A	SNP	PAMR1	ENST00000278360	human	ensembl	74_37	-1	known	silent	c.567	p.N189	0.966	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_Peptidase_S1,pfam_CUB_dom,pfam_Sushi_SCR_CCP,pfam_EG-like_dom,superfamily_Trypsin-like_Pept_dom,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_EG-like_dom,smart_CUB_dom,smart_EGF-like_Ca-bd_dom,smart_Sushi_SCR_CCP,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_CUB_dom,pfscan_EG-like_dom,pfscan_Sushi_SCR_CCP,pfscan_Peptidase_S1	-	no_errors	PAMR1	HGNC	ENSG00000149090	tier1	-	-	29	0	0.00	37	4	9.76
PAPPA2	0	genome.wustl.edu	37	1	176659352	176659352	+	Silent	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	176659352	176659352	G	T	SNP	PAPPA2	ENST00000367662	human	ensembl	74_37	+1	known	silent	c.2217	p.L739	1.000	pfam_Peptidase_M43	pfam_Notch_dom,pfam_Sushi_SCR_CCP,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA2	HGNC	ENSG00000116183	tier1	-	-	35	0	0.00	23	11	31.43
PCSK5	0	genome.wustl.edu	37	9	78925663	78925663	+	Silent	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	9	78925663	78925663	G	A	SNP	PCSK5	ENST00000545128	human	ensembl	74_37	+1	known	silent	c.3699	p.E1233	0.981	superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat	pfam_Peptidase_S8/S53_dom,pfam_PrprotnconvertsP,superfamily_Peptidase_S8/S53_dom,superfamily_Galactose-bd-like,superfamily_Growth_fac_rcpt_N_dom,superfamily_Prot_inh_propept,smart_Furin_repeat,smart_EG-like_dom,prints_Peptidase_S8_subtilisin-rel	-	no_errors	PCSK5	HGNC	ENSG00000099139	tier1	-	-	22	0	0.00	25	11	30.56
PCSK5	0	genome.wustl.edu	37	9	78925663	78925663	+	Silent	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	9	78925663	78925663	G	A	SNP	PCSK5	ENST00000545128	human	ensembl	74_37	+1	known	silent	c.3699	p.E1233	0.981	superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat	pfam_Peptidase_S8/S53_dom,pfam_PrprotnconvertsP,superfamily_Peptidase_S8/S53_dom,superfamily_Galactose-bd-like,superfamily_Growth_fac_rcpt_N_dom,superfamily_Prot_inh_propept,smart_Furin_repeat,smart_EG-like_dom,prints_Peptidase_S8_subtilisin-rel	-	no_errors	PCSK5	HGNC	ENSG00000099139	tier1	-	-	37	0	0.00	25	11	30.56
PFAS	0	genome.wustl.edu	37	17	8172309	8172309	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	17	8172309	8172309	G	T	SNP	PFAS	ENST00000314666	human	ensembl	74_37	+1	known	missense	c.3744	p.Q1248H	0.983	tigrfam_PRibForGlyAmidine_synth	pfam_AIR_synth_C_dom,pfam_AIR_synth_N_dom,superfamily_PurM_N-like,superfamily_AIR_synth_C_dom,tigrfam_PRibForGlyAmidine_synth	-	no_errors	PFAS	HGNC	ENSG00000178921	tier1	-	-	38	0	0.00	77	5	6.10
PFAS	0	genome.wustl.edu	37	17	8172309	8172309	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	17	8172309	8172309	G	T	SNP	PFAS	ENST00000314666	human	ensembl	74_37	+1	known	missense	c.3744	p.Q1248H	0.983	tigrfam_PRibForGlyAmidine_synth	pfam_AIR_synth_C_dom,pfam_AIR_synth_N_dom,superfamily_PurM_N-like,superfamily_AIR_synth_C_dom,tigrfam_PRibForGlyAmidine_synth	-	no_errors	PFAS	HGNC	ENSG00000178921	tier1	-	-	81	0	0.00	77	5	6.10
PHF15	0	genome.wustl.edu	37	5	133873737	133873737	+	Silent	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	5	133873737	133873737	G	T	SNP	PHF15	ENST00000395003	human	ensembl	74_37	+1	known	silent	c.117	p.S39	0.858	NULL	pfam_Enhancer_polycomb-like_N,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF15	HGNC	ENSG00000043143				25	0	0.00	32	2	5.88
PHF19	0	genome.wustl.edu	37	9	123632125	123632125	+	Silent	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	9	123632125	123632125	G	T	SNP	PHF19	ENST00000373896	human	ensembl	74_37	-1	known	silent	c.463	p.R155	1.000	superfamily_Znf_FYVE_PHD	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Tudor,smart_Znf_PHD	-	no_errors	PHF19	HGNC	ENSG00000119403	tier1	-	-	41	0	0.00	36	4	10.00
PIAS4	0	genome.wustl.edu	37	19	4033481	4033481	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	19	4033481	4033481	G	A	SNP	PIAS4	ENST00000262971	human	ensembl	74_37	+1	known	missense	c.1045	p.D349N	1.000	pfam_Znf_MIZ,pfscan_Znf_MIZ	pfam_Znf_MIZ,smart_SAP_dom,pfscan_Znf_MIZ,pfscan_SAP_dom	-	no_errors	PIAS4	HGNC	ENSG00000105229	tier1	-	-	37	0	0.00	47	10	16.95
PIAS4	0	genome.wustl.edu	37	19	4033481	4033481	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	19	4033481	4033481	G	A	SNP	PIAS4	ENST00000262971	human	ensembl	74_37	+1	known	missense	c.1045	p.D349N	1.000	pfam_Znf_MIZ,pfscan_Znf_MIZ	pfam_Znf_MIZ,smart_SAP_dom,pfscan_Znf_MIZ,pfscan_SAP_dom	-	no_errors	PIAS4	HGNC	ENSG00000105229	tier1	-	-	50	0	0.00	47	10	16.95
PITX3	0	genome.wustl.edu	37	10	103990330	103990330	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	10	103990330	103990330	C	G	SNP	PITX3	ENST00000370002	human	ensembl	74_37	-1	known	missense	c.850	p.G284R	1.000	pirsf_Homeobox_Pitx/unc30	pfam_Homeobox_dom,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pirsf_Homeobox_Pitx/unc30,pfscan_OAR_dom,pfscan_Homeobox_dom	-	no_errors	PITX3	HGNC	ENSG00000107859	tier1	-	-	44	0	0.00	60	4	6.25
PKDREJ	0	genome.wustl.edu	37	22	46653089	46653089	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	22	46653089	46653089	G	T	SNP	PKDREJ	ENST00000253255	human	ensembl	74_37	-1	known	missense	c.6131	p.S2044Y	0.103	pfam_PKD1_2_channel,pfam_Ion_trans_dom	pfam_PKD1_2_channel,pfam_PKD/REJ-like,pfam_PLAT/LH2_dom,pfam_Ion_trans_dom,superfamily_Lipase_LipOase,smart_GPS_dom,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom,pfscan_REJ-like,prints_PKD_2	-	no_errors	PKDREJ	HGNC	ENSG00000130943				17	0	0.00	22	2	8.33
PLEKHM1P	0	genome.wustl.edu	37	17	62811071	62811071	+	RNA	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	17	62811071	62811071	G	T	SNP	PLEKHM1P	ENST00000580919	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	PLEKHM1P	HGNC	ENSG00000214176	tier1	-	-	20	0	0.00	49	9	15.52
PLEKHM1P	0	genome.wustl.edu	37	17	62811071	62811071	+	RNA	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	17	62811071	62811071	G	T	SNP	PLEKHM1P	ENST00000580919	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	PLEKHM1P	HGNC	ENSG00000214176	tier1	-	-	42	0	0.00	49	9	15.52
POLG	0	genome.wustl.edu	37	15	89869959	89869959	+	Silent	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	15	89869959	89869959	G	T	SNP	POLG	ENST00000268124	human	ensembl	74_37	-1	known	silent	c.1596	p.P532	0.190	pirsf_DNA-dir_DNA_pol_A_mt_sub	pirsf_DNA-dir_DNA_pol_A_mt_sub,pfam_DNA-dir_DNA_pol_A_palm_dom,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_A_palm_dom,prints_DNA-dir_DNA_pol_A_mt	-	no_errors	POLG	HGNC	ENSG00000140521	tier1	-	-	32	0	0.00	44	4	8.33
POLG	0	genome.wustl.edu	37	15	89869959	89869959	+	Silent	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	15	89869959	89869959	G	T	SNP	POLG	ENST00000268124	human	ensembl	74_37	-1	known	silent	c.1596	p.P532	0.190	pirsf_DNA-dir_DNA_pol_A_mt_sub	pirsf_DNA-dir_DNA_pol_A_mt_sub,pfam_DNA-dir_DNA_pol_A_palm_dom,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_A_palm_dom,prints_DNA-dir_DNA_pol_A_mt	-	no_errors	POLG	HGNC	ENSG00000140521	tier1	-	-	52	0	0.00	44	4	8.33
POLQ	0	genome.wustl.edu	37	3	121208707	121208707	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	3	121208707	121208707	T	G	SNP	POLQ	ENST00000264233	human	ensembl	74_37	-1	known	missense	c.3071	p.K1024T	0.615	NULL	pfam_DNA-dir_DNA_pol_A_palm_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_RNaseH-like_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_DNA-dir_DNA_pol_A_palm_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,prints_DNA_polymerase_A	-	no_errors	POLQ	HGNC	ENSG00000051341				27	0	0.00	42	3	6.67
POLR1B	0	genome.wustl.edu	37	2	113306968	113306968	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	113306968	113306968	C	A	SNP	POLR1B	ENST00000541869	human	ensembl	74_37	+1	known	missense	c.731	p.T244N	1.000	pfam_RNA_pol_bsu_protrusion,pfam_RNA_pol_Rpb2_2	pfam_DNA-dir_RNA_pol_su2_6,pfam_RNA_pol_bsu_protrusion,pfam_RNA_pol_Rpb2_3,pfam_RNA_pol_Rpb2_7,pfam_RNA_pol_Rpa2-specific,pfam_RNA_pol_Rpb2_2,pfam_RNA_pol_Rpb2_5	-	no_errors	POLR1B	HGNC	ENSG00000125630	tier1	-	-	73	0	0.00	88	33	27.27
POLR1B	0	genome.wustl.edu	37	2	113306968	113306968	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	113306968	113306968	C	A	SNP	POLR1B	ENST00000541869	human	ensembl	74_37	+1	known	missense	c.731	p.T244N	1.000	pfam_RNA_pol_bsu_protrusion,pfam_RNA_pol_Rpb2_2	pfam_DNA-dir_RNA_pol_su2_6,pfam_RNA_pol_bsu_protrusion,pfam_RNA_pol_Rpb2_3,pfam_RNA_pol_Rpb2_7,pfam_RNA_pol_Rpa2-specific,pfam_RNA_pol_Rpb2_2,pfam_RNA_pol_Rpb2_5	-	no_errors	POLR1B	HGNC	ENSG00000125630	tier1	-	-	92	0	0.00	88	33	27.27
POTEF	0	genome.wustl.edu	37	2	130832231	130832231	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	130832231	130832231	C	A	SNP	POTEF	ENST00000357462	human	ensembl	74_37	-1	known	missense	c.2814	p.K938N	1.000	pfam_Actin-related,smart_Actin-related,prints_Actin-related	pfam_Actin-related,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Actin-related,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Actin-related	-	no_errors	POTEF	HGNC	ENSG00000196604	tier1	-	-	46	0	0.00	46	17	26.98
POTEF	0	genome.wustl.edu	37	2	130832231	130832231	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	130832231	130832231	C	A	SNP	POTEF	ENST00000357462	human	ensembl	74_37	-1	known	missense	c.2814	p.K938N	1.000	pfam_Actin-related,smart_Actin-related,prints_Actin-related	pfam_Actin-related,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Actin-related,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Actin-related	-	no_errors	POTEF	HGNC	ENSG00000196604	tier1	-	-	80	0	0.00	46	17	26.98
PPM1F	0	genome.wustl.edu	37	22	22285609	22285609	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	22	22285609	22285609	G	A	SNP	PPM1F	ENST00000263212	human	ensembl	74_37	-1	known	missense	c.802	p.H268Y	0.897	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	-	no_errors	PPM1F	HGNC	ENSG00000100034	tier1	-	-	28	0	0.00	42	4	8.70
PPM1F	0	genome.wustl.edu	37	22	22285609	22285609	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	22	22285609	22285609	G	A	SNP	PPM1F	ENST00000263212	human	ensembl	74_37	-1	known	missense	c.802	p.H268Y	0.897	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	-	no_errors	PPM1F	HGNC	ENSG00000100034	tier1	-	-	42	0	0.00	42	4	8.70
PRAMEF5	0	genome.wustl.edu	37	1	13366043	13366043	+	Missense_Mutation	SNP	T	T	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	13366043	13366043	T	C	SNP	PRAMEF5	ENST00000376168	human	ensembl	74_37	+1	known	missense	c.487	p.Y163H	0.002	NULL	NULL	-	no_errors	PRAMEF5	HGNC	ENSG00000204502	tier1	-	-	9	0	0.00	3	3	50.00
PRPF40B	0	genome.wustl.edu	37	12	50036107	50036107	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	12	50036107	50036107	G	T	SNP	PRPF40B	ENST00000548825	human	ensembl	74_37	+1	known	missense	c.1974	p.M658I	1.000	superfamily_FF_domain,smart_FF_domain	pfam_FF_domain,pfam_WW_dom,superfamily_FF_domain,superfamily_WW_dom,smart_WW_dom,smart_FF_domain,pfscan_WW_dom	-	no_errors	PRPF40B	HGNC	ENSG00000110844	tier1	-	-	14	0	0.00	22	5	18.52
PRPF40B	0	genome.wustl.edu	37	12	50036108	50036108	+	Silent	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	12	50036108	50036108	C	T	SNP	PRPF40B	ENST00000548825	human	ensembl	74_37	+1	known	silent	c.1975	p.L659	1.000	superfamily_FF_domain,smart_FF_domain	pfam_FF_domain,pfam_WW_dom,superfamily_FF_domain,superfamily_WW_dom,smart_WW_dom,smart_FF_domain,pfscan_WW_dom	-	no_errors	PRPF40B	HGNC	ENSG00000110844	tier1	-	-	13	0	0.00	22	5	18.52
PRRT1	0	genome.wustl.edu	37	6	32116781	32116781	+	RNA	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	6	32116781	32116781	G	A	SNP	PRRT1	ENST00000467780	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	PRRT1	HGNC	ENSG00000204314	tier1	-	-	48	0	0.00	57	17	22.97
PRRT1	0	genome.wustl.edu	37	6	32116781	32116781	+	RNA	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	6	32116781	32116781	G	A	SNP	PRRT1	ENST00000467780	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	PRRT1	HGNC	ENSG00000204314	tier1	-	-	99	0	0.00	57	17	22.97
PRRT1	0	genome.wustl.edu	37	6	32117443	32117443	+	Silent	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	6	32117443	32117443	C	T	SNP	PRRT1	ENST00000211413	human	ensembl	74_37	-1	known	silent	c.615	p.P205	0.943	NULL	pfam_CD225/Dispanin_fam	-	no_errors	PRRT1	HGNC	ENSG00000204314	tier1	-	-	19	0	0.00	19	7	26.92
PRRT1	0	genome.wustl.edu	37	6	32117443	32117443	+	Silent	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	6	32117443	32117443	C	T	SNP	PRRT1	ENST00000211413	human	ensembl	74_37	-1	known	silent	c.615	p.P205	0.943	NULL	pfam_CD225/Dispanin_fam	-	no_errors	PRRT1	HGNC	ENSG00000204314	tier1	-	-	42	0	0.00	19	7	26.92
PRSS35	0	genome.wustl.edu	37	6	84233206	84233206	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	6	84233206	84233206	A	G	SNP	PRSS35	ENST00000369700	human	ensembl	74_37	+1	known	missense	c.46	p.T16A	0.001	NULL	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom	-	no_errors	PRSS35	HGNC	ENSG00000146250	tier1	-	-	46	0	0.00	43	14	24.56
PRSS35	0	genome.wustl.edu	37	6	84233206	84233206	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	6	84233206	84233206	A	G	SNP	PRSS35	ENST00000369700	human	ensembl	74_37	+1	known	missense	c.46	p.T16A	0.001	NULL	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom	-	no_errors	PRSS35	HGNC	ENSG00000146250	tier1	-	-	66	0	0.00	43	14	24.56
PTPN21	0	genome.wustl.edu	37	14	88945961	88945961	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	14	88945961	88945961	G	A	SNP	PTPN21	ENST00000328736	human	ensembl	74_37	-1	known	missense	c.1814	p.T605M	0.999	pirsf_Tyr_Pase_non-rcpt_typ-14/21	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_FERM_central,pfam_FERM_N,pfam_FERM_PH-like_C,superfamily_FERM_central,smart_Band_41_domain,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-14/21,pfscan_FERM_domain,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam	-	no_errors	PTPN21	HGNC	ENSG00000070778	tier1	-	-	34	0	0.00	41	25	37.88
PTPN23	0	genome.wustl.edu	37	3	47454574	47454574	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	3	47454574	47454574	A	C	SNP	PTPN23	ENST00000265562	human	ensembl	74_37	+1	known	missense	c.4810	p.N1604H	1.000	NULL	pfam_BRO1_dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_BRO1_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN23	HGNC	ENSG00000076201	tier1	-	-	45	0	0.00	30	9	23.08
PTPN23	0	genome.wustl.edu	37	3	47454574	47454574	+	Missense_Mutation	SNP	A	A	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	3	47454574	47454574	A	C	SNP	PTPN23	ENST00000265562	human	ensembl	74_37	+1	known	missense	c.4810	p.N1604H	1.000	NULL	pfam_BRO1_dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_BRO1_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN23	HGNC	ENSG00000076201	tier1	-	-	50	0	0.00	30	9	23.08
RABGAP1	0	genome.wustl.edu	37	9	125827753	125827753	+	Frame_Shift_Del	DEL	A	A	-			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	9	125827753	125827753	A	-	DEL	RABGAP1	ENST00000456584	human	ensembl	74_37	+1	known	frame_shift_del	c.1717	p.K576fs	0.000	pfscan_Rab-GTPase-TBC_dom	pfam_Kinesin-like,pfam_Rab-GTPase-TBC_dom,pfam_PTB/PI_dom,superfamily_Rab-GTPase-TBC_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	RABGAP1	HGNC	ENSG00000011454	tier1			42	0	0.00	52	6	10.34
RABGGTB	0	genome.wustl.edu	37	1	76255542	76255542	+	RNA	DEL	A	A	-			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	76255542	76255542	A	-	DEL	RABGGTB	ENST00000461653	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RABGGTB	HGNC	ENSG00000137955	tier1			29	0	0.00	33	2	5.71
RASGEF1C	0	genome.wustl.edu	37	5	179528352	179528353	+	RNA	DEL	GG	GG	-			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	GG	GG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	5	179528352	179528353	GG	-	DEL	RASGEF1C	ENST00000519456	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.147:0.007	-	-	-	no_errors	RASGEF1C	HGNC	ENSG00000146090	tier1			18	0	0.00	19	6	24.00
RBFOX1	0	genome.wustl.edu	37	16	7743345	7743345	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	16	7743345	7743345	G	T	SNP	RBFOX1	ENST00000547372	human	ensembl	74_37	+1	known	nonsense	c.1153	p.E385*	1.000	pirsf_RNA-bd_Fox-1	pfam_Fox-1_C_dom,pfam_RRM_dom,smart_RRM_dom,pirsf_RNA-bd_Fox-1,pfscan_RRM_dom	-	no_errors	RBFOX1	HGNC	ENSG00000078328				34	0	0.00	48	3	5.88
RBM26	0	genome.wustl.edu	37	13	79940176	79940176	+	RNA	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	13	79940176	79940176	G	A	SNP	RBM26	ENST00000461008	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.459	-	-	-	no_errors	RBM26	HGNC	ENSG00000139746	tier1	-	-	22	0	0.00	29	6	17.14
RBM26	0	genome.wustl.edu	37	13	79940176	79940176	+	RNA	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	13	79940176	79940176	G	A	SNP	RBM26	ENST00000461008	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.459	-	-	-	no_errors	RBM26	HGNC	ENSG00000139746	tier1	-	-	25	0	0.00	29	6	17.14
RBMS1	0	genome.wustl.edu	37	2	161130757	161130757	+	RNA	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	161130757	161130757	C	T	SNP	RBMS1	ENST00000474820	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	RBMS1	HGNC	ENSG00000153250	tier1	-	-	40	0	0.00	74	22	22.92
RBMS1	0	genome.wustl.edu	37	2	161130757	161130757	+	RNA	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	161130757	161130757	C	T	SNP	RBMS1	ENST00000474820	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	RBMS1	HGNC	ENSG00000153250	tier1	-	-	47	0	0.00	74	22	22.92
RELN	0	genome.wustl.edu	37	7	103234836	103234836	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	7	103234836	103234836	C	A	SNP	RELN	ENST00000424685	human	ensembl	74_37	-1	known	missense	c.3643	p.D1215Y	1.000	superfamily_Growth_fac_rcpt_N_dom	pfam_EGF_extracell,pfam_Reeler_dom,pfam_BNR_rpt,superfamily_Sialidases,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Reeler_dom	-	no_errors	RELN	HGNC	ENSG00000189056				22	0	0.00	48	3	5.88
RFT1	0	genome.wustl.edu	37	3	53145865	53145865	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	3	53145865	53145865	C	A	SNP	RFT1	ENST00000296292	human	ensembl	74_37	-1	known	missense	c.756	p.L252F	1.000	pfam_RFT1	pfam_RFT1	-	no_errors	RFT1	HGNC	ENSG00000163933				40	0	0.00	66	4	5.71
RHBG	0	genome.wustl.edu	37	1	156354355	156354355	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	156354355	156354355	C	A	SNP	RHBG	ENST00000368246	human	ensembl	74_37	+1	known	missense	c.1268	p.P423Q	0.476	NULL	pfam_NH4_transpt_AmtB-like_dom,superfamily_NH4_transpt_AmtB-like_dom,prints_RhesusRHD	-	no_errors	RHBG	HGNC	ENSG00000132677				48	0	0.00	71	5	6.58
RICTOR	0	genome.wustl.edu	37	5	38945021	38945021	+	Silent	SNP	A	A	G			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	5	38945021	38945021	A	G	SNP	RICTOR	ENST00000296782	human	ensembl	74_37	-1	known	silent	c.4855	p.L1619	0.748	NULL	superfamily_ARM-type_fold	-	no_errors	RICTOR	HGNC	ENSG00000164327	tier1	-	-	48	0	0.00	65	15	18.75
RIMS1	0	genome.wustl.edu	37	6	72955519	72955519	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	6	72955519	72955519	G	T	SNP	RIMS1	ENST00000521978	human	ensembl	74_37	+1	known	missense	c.2083	p.D695Y	1.000	superfamily_PDZ	pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,superfamily_PDZ,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel	-	no_errors	RIMS1	HGNC	ENSG00000079841				62	0	0.00	52	4	7.14
RNASE4	0	genome.wustl.edu	37	14	21167735	21167735	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	14	21167735	21167735	C	T	SNP	RNASE4	ENST00000304704	human	ensembl	74_37	+1	known	missense	c.205	p.R69C	0.300	pfam_RNaseA_domain,superfamily_RNaseA_domain,smart_RNaseA_domain,prints_RNaseA	pfam_RNaseA_domain,superfamily_RNaseA_domain,smart_RNaseA_domain,prints_RNaseA	-	no_errors	RNASE4	HGNC	ENSG00000258818	tier1	-	-	29	0	0.00	32	7	17.95
RNASE4	0	genome.wustl.edu	37	14	21167735	21167735	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	14	21167735	21167735	C	T	SNP	RNASE4	ENST00000304704	human	ensembl	74_37	+1	known	missense	c.205	p.R69C	0.300	pfam_RNaseA_domain,superfamily_RNaseA_domain,smart_RNaseA_domain,prints_RNaseA	pfam_RNaseA_domain,superfamily_RNaseA_domain,smart_RNaseA_domain,prints_RNaseA	-	no_errors	RNASE4	HGNC	ENSG00000258818	tier1	-	-	41	0	0.00	32	7	17.95
RNF213	0	genome.wustl.edu	37	17	78350691	78350691	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	17	78350691	78350691	C	A	SNP	RNF213	ENST00000582970	human	ensembl	74_37	+1	known	missense	c.13438	p.L4480I	1.000	NULL	superfamily_P-loop_NTPase,smart_AAA+_ATPase,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF213	HGNC	ENSG00000173821	tier1	-	-	23	0	0.00	34	9	20.93
RNF213	0	genome.wustl.edu	37	17	78350691	78350691	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	17	78350691	78350691	C	A	SNP	RNF213	ENST00000582970	human	ensembl	74_37	+1	known	missense	c.13438	p.L4480I	1.000	NULL	superfamily_P-loop_NTPase,smart_AAA+_ATPase,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF213	HGNC	ENSG00000173821	tier1	-	-	37	0	0.00	34	9	20.93
ROBO3	0	genome.wustl.edu	37	11	124740981	124740981	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	11	124740981	124740981	G	T	SNP	ROBO3	ENST00000397801	human	ensembl	74_37	+1	known	nonsense	c.1105	p.E369*	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Fibronectin_type3,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	ROBO3	HGNC	ENSG00000154134				25	0	0.00	37	2	5.13
ROR2	0	genome.wustl.edu	37	9	94489026	94489026	+	Splice_Site	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	9	94489026	94489026	C	T	SNP	ROR2	ENST00000375708	human	ensembl	74_37	-1	known	splice_site	c.1184-1	e8-1	1.000	-	-	-	no_errors	ROR2	HGNC	ENSG00000169071	tier1	-	-	17	0	0.00	25	12	32.43
ROR2	0	genome.wustl.edu	37	9	94489026	94489026	+	Splice_Site	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	9	94489026	94489026	C	T	SNP	ROR2	ENST00000375708	human	ensembl	74_37	-1	known	splice_site	c.1184-1	e8-1	1.000	-	-	-	no_errors	ROR2	HGNC	ENSG00000169071	tier1	-	-	22	0	0.00	25	12	32.43
RPL12P38	0	genome.wustl.edu	37	17	58512418	58512419	+	RNA	INS	-	-	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	17	58512418	58512419	-	A	INS	RPL12P38	ENST00000588627	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998:0.998	-	-	-	no_errors	RPL12P38	HGNC	ENSG00000213228	tier1			37	0	0.00	55	5	8.33
RPLP0P2	0	genome.wustl.edu	37	11	61405193	61405193	+	RNA	SNP	A	A	G			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	11	61405193	61405193	A	G	SNP	RPLP0P2	ENST00000496593	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.179	-	-	-	no_errors	RPLP0P2	HGNC	ENSG00000243742				63	0	0.00	112	7	5.88
RSPO4	0	genome.wustl.edu	37	20	982768	982768	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	20	982768	982768	C	T	SNP	RSPO4	ENST00000217260	human	ensembl	74_37	-1	known	missense	c.40	p.A14T	0.910	NULL	superfamily_Growth_fac_rcpt_N_dom,superfamily_Thrombospondin_1_rpt,smart_Furin_repeat,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	RSPO4	HGNC	ENSG00000101282				8	0	0.00	10	2	16.67
RYR1	0	genome.wustl.edu	37	19	39025783	39025783	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	19	39025783	39025783	G	T	SNP	RYR1	ENST00000359596	human	ensembl	74_37	+1	known	nonsense	c.11362	p.E3788*	1.000	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_MG_RAP_rcpt_1,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_MIR_motif	-	no_errors	RYR1	HGNC	ENSG00000196218				26	0	0.00	32	2	5.88
SAMD14	0	genome.wustl.edu	37	17	48191301	48191301	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	17	48191301	48191301	C	T	SNP	SAMD14	ENST00000503131	human	ensembl	74_37	-1	known	missense	c.1169	p.G390E	1.000	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	SAMD14	HGNC	ENSG00000167100	tier1	-	-	47	0	0.00	42	23	35.38
SAMD14	0	genome.wustl.edu	37	17	48191301	48191301	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	17	48191301	48191301	C	T	SNP	SAMD14	ENST00000503131	human	ensembl	74_37	-1	known	missense	c.1169	p.G390E	1.000	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	SAMD14	HGNC	ENSG00000167100	tier1	-	-	84	0	0.00	42	23	35.38
SAMD9L	0	genome.wustl.edu	37	7	92762703	92762703	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	7	92762703	92762703	A	G	SNP	SAMD9L	ENST00000318238	human	ensembl	74_37	-1	known	missense	c.2582	p.L861P	1.000	superfamily_P-loop_NTPase	superfamily_SAM/pointed,superfamily_P-loop_NTPase,pfscan_SAM	-	no_errors	SAMD9L	HGNC	ENSG00000177409	tier1	-	-	17	0	0.00	15	9	37.50
SDK1	0	genome.wustl.edu	37	7	3678687	3678687	+	Silent	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	7	3678687	3678687	G	T	SNP	SDK1	ENST00000404826	human	ensembl	74_37	+1	known	silent	c.510	p.V170	0.996	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	SDK1	HGNC	ENSG00000146555				26	0	0.00	46	4	8.00
SEC22C	0	genome.wustl.edu	37	3	42610376	42610376	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	3	42610376	42610376	C	A	SNP	SEC22C	ENST00000264454	human	ensembl	74_37	-1	known	missense	c.163	p.G55C	1.000	superfamily_Longin-like_dom,pfscan_Longin_dom	superfamily_Longin-like_dom,pfscan_Longin_dom	-	no_errors	SEC22C	HGNC	ENSG00000093183	tier1	-	-	42	0	0.00	59	4	6.35
SEC22C	0	genome.wustl.edu	37	3	42610376	42610376	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	3	42610376	42610376	C	A	SNP	SEC22C	ENST00000264454	human	ensembl	74_37	-1	known	missense	c.163	p.G55C	1.000	superfamily_Longin-like_dom,pfscan_Longin_dom	superfamily_Longin-like_dom,pfscan_Longin_dom	-	no_errors	SEC22C	HGNC	ENSG00000093183	tier1	-	-	52	0	0.00	59	4	6.35
SELP	0	genome.wustl.edu	37	1	169586496	169586496	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	169586496	169586496	G	A	SNP	SELP	ENST00000263686	human	ensembl	74_37	-1	known	missense	c.251	p.P84L	0.998	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_Sushi_SCR_CCP,pfam_C-type_lectin,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Sushi_SCR_CCP,prints_Selectin_superfamily	-	no_errors	SELP	HGNC	ENSG00000174175	tier1	-	-	77	0	0.00	68	24	26.09
SELP	0	genome.wustl.edu	37	1	169586496	169586496	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	169586496	169586496	G	A	SNP	SELP	ENST00000263686	human	ensembl	74_37	-1	known	missense	c.251	p.P84L	0.998	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_Sushi_SCR_CCP,pfam_C-type_lectin,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Sushi_SCR_CCP,prints_Selectin_superfamily	-	no_errors	SELP	HGNC	ENSG00000174175	tier1	-	-	87	0	0.00	68	24	26.09
SEMA4D	0	genome.wustl.edu	37	9	92006182	92006182	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	9	92006182	92006182	G	T	SNP	SEMA4D	ENST00000356444	human	ensembl	74_37	-1	known	nonsense	c.771	p.C257*	1.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Plexin_repeat,pfam_Immunoglobulin,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Ig_sub,smart_Ig_sub2,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA4D	HGNC	ENSG00000187764				20	0	0.00	28	3	9.68
SETD2	0	genome.wustl.edu	37	3	47155365	47155365	+	Splice_Site	SNP	C	C	G			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	3	47155365	47155365	C	G	SNP	SETD2	ENST00000409792	human	ensembl	74_37	-1	known	splice_site	c.4715+1	e5+1	1.000	-	-	-	no_errors	SETD2	HGNC	ENSG00000181555				13	0	0.00	14	8	36.36
SFRP4	0	genome.wustl.edu	37	7	37947216	37947216	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	7	37947216	37947216	C	A	SNP	SFRP4	ENST00000436072	human	ensembl	74_37	-1	known	missense	c.906	p.K302N	0.931	pfscan_Netrin_domain	pfam_Frizzled_dom,pfam_Netrin_module_non-TIMP,superfamily_Frizzled_dom,superfamily_TIMP-like_OB-fold,smart_Frizzled_dom,smart_Netrin_module_non-TIMP,pfscan_Frizzled_dom,pfscan_Netrin_domain	-	no_errors	SFRP4	HGNC	ENSG00000106483	tier1	-	-	49	0	0.00	43	16	27.12
SFRP4	0	genome.wustl.edu	37	7	37947216	37947216	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	7	37947216	37947216	C	A	SNP	SFRP4	ENST00000436072	human	ensembl	74_37	-1	known	missense	c.906	p.K302N	0.931	pfscan_Netrin_domain	pfam_Frizzled_dom,pfam_Netrin_module_non-TIMP,superfamily_Frizzled_dom,superfamily_TIMP-like_OB-fold,smart_Frizzled_dom,smart_Netrin_module_non-TIMP,pfscan_Frizzled_dom,pfscan_Netrin_domain	-	no_errors	SFRP4	HGNC	ENSG00000106483	tier1	-	-	62	0	0.00	43	16	27.12
SH3BP5-AS1	0	genome.wustl.edu	37	3	15297082	15297083	+	RNA	INS	-	-	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	3	15297082	15297083	-	T	INS	SH3BP5-AS1	ENST00000420195	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.057:0.010	-	-	-	no_errors	SH3BP5-AS1	HGNC	ENSG00000224660	tier1			20	0	0.00	14	4	22.22
SLC18A3	0	genome.wustl.edu	37	10	50818987	50818987	+	Silent	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	10	50818987	50818987	C	T	SNP	SLC18A3	ENST00000374115	human	ensembl	74_37	+1	known	silent	c.201	p.G67	0.907	superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC18A3	HGNC	ENSG00000187714	tier1	-	-	18	0	0.00	17	11	39.29
SLC26A2	0	genome.wustl.edu	37	5	149357798	149357798	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	5	149357798	149357798	G	T	SNP	SLC26A2	ENST00000286298	human	ensembl	74_37	+1	known	nonsense	c.583	p.G195*	0.000	tigrfam_SulP_transpt	pfam_Sulph_transpt,pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom,tigrfam_SulP_transpt	-	no_errors	SLC26A2	HGNC	ENSG00000155850	tier1	-	-	17	0	0.00	25	9	26.47
SLC26A2	0	genome.wustl.edu	37	5	149357798	149357798	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	5	149357798	149357798	G	T	SNP	SLC26A2	ENST00000286298	human	ensembl	74_37	+1	known	nonsense	c.583	p.G195*	0.000	tigrfam_SulP_transpt	pfam_Sulph_transpt,pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom,tigrfam_SulP_transpt	-	no_errors	SLC26A2	HGNC	ENSG00000155850	tier1	-	-	27	0	0.00	25	9	26.47
SLC26A9	0	genome.wustl.edu	37	1	205897959	205897959	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	205897959	205897959	G	T	SNP	SLC26A9	ENST00000340781	human	ensembl	74_37	-1	known	missense	c.949	p.R317S	0.431	pfam_Sulph_transpt,tigrfam_SulP_transpt	pfam_Sulph_transpt,pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom,tigrfam_SulP_transpt	-	no_errors	SLC26A9	HGNC	ENSG00000174502				23	0	0.00	33	2	5.71
SLC40A1	0	genome.wustl.edu	37	2	190426823	190426823	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	190426823	190426823	C	A	SNP	SLC40A1	ENST00000261024	human	ensembl	74_37	-1	known	missense	c.1497	p.M499I	1.000	pfam_Ferroportin-1,superfamily_MFS_dom_general_subst_transpt	pfam_Ferroportin-1,superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC40A1	HGNC	ENSG00000138449	tier1	-	-	35	0	0.00	42	4	8.70
SLC40A1	0	genome.wustl.edu	37	2	190426823	190426823	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	190426823	190426823	C	A	SNP	SLC40A1	ENST00000261024	human	ensembl	74_37	-1	known	missense	c.1497	p.M499I	1.000	pfam_Ferroportin-1,superfamily_MFS_dom_general_subst_transpt	pfam_Ferroportin-1,superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC40A1	HGNC	ENSG00000138449	tier1	-	-	48	0	0.00	42	4	8.70
SLC4A10	0	genome.wustl.edu	37	2	162751223	162751223	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	162751223	162751223	G	A	SNP	SLC4A10	ENST00000446997	human	ensembl	74_37	+1	known	missense	c.1229	p.R410H	1.000	pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,tigrfam_HCO3_transpt_euk	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Na/HCO3_transpt,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A10	HGNC	ENSG00000144290	tier1	-	-	92	0	0.00	69	51	42.50
SLC4A2	0	genome.wustl.edu	37	7	150762016	150762016	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	7	150762016	150762016	G	A	SNP	SLC4A2	ENST00000413384	human	ensembl	74_37	+1	known	missense	c.541	p.E181K	0.977	NULL	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Anion_exchange,prints_Anion_exchange_2,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A2	HGNC	ENSG00000164889	tier1	-	-	51	0	0.00	71	6	7.79
SLC4A2	0	genome.wustl.edu	37	7	150762016	150762016	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	7	150762016	150762016	G	A	SNP	SLC4A2	ENST00000413384	human	ensembl	74_37	+1	known	missense	c.541	p.E181K	0.977	NULL	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Anion_exchange,prints_Anion_exchange_2,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A2	HGNC	ENSG00000164889	tier1	-	-	97	0	0.00	71	6	7.79
SLC6A20	0	genome.wustl.edu	37	3	45814027	45814027	+	Silent	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	3	45814027	45814027	G	T	SNP	SLC6A20	ENST00000358525	human	ensembl	74_37	-1	known	silent	c.663	p.T221	0.991	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_orphan	-	no_errors	SLC6A20	HGNC	ENSG00000163817	tier1	-	-	31	0	0.00	47	4	7.84
SLC6A20	0	genome.wustl.edu	37	3	45814027	45814027	+	Silent	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	3	45814027	45814027	G	T	SNP	SLC6A20	ENST00000358525	human	ensembl	74_37	-1	known	silent	c.663	p.T221	0.991	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_orphan	-	no_errors	SLC6A20	HGNC	ENSG00000163817	tier1	-	-	41	0	0.00	47	4	7.84
SLC7A6	0	genome.wustl.edu	37	16	68308966	68308966	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	16	68308966	68308966	G	T	SNP	SLC7A6	ENST00000219343	human	ensembl	74_37	+1	known	missense	c.337	p.A113S	1.000	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	-	no_errors	SLC7A6	HGNC	ENSG00000103064				31	0	0.00	51	3	5.56
SLC9A3	0	genome.wustl.edu	37	5	488464	488464	+	Silent	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	5	488464	488464	G	A	SNP	SLC9A3	ENST00000264938	human	ensembl	74_37	-1	known	silent	c.642	p.F214	0.961	pfam_Cation/H_exchanger,tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,superfamily_Reg_factor_effector_dom,prints_Na/H_exchanger_3/5,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A3	HGNC	ENSG00000066230	tier1	-	-	50	0	0.00	52	25	32.47
SLC9A3	0	genome.wustl.edu	37	5	488464	488464	+	Silent	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	5	488464	488464	G	A	SNP	SLC9A3	ENST00000264938	human	ensembl	74_37	-1	known	silent	c.642	p.F214	0.961	pfam_Cation/H_exchanger,tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,superfamily_Reg_factor_effector_dom,prints_Na/H_exchanger_3/5,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A3	HGNC	ENSG00000066230	tier1	-	-	65	0	0.00	52	25	32.47
SLCO1B7	0	genome.wustl.edu	37	12	21196409	21196409	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	12	21196409	21196409	G	A	SNP	SLCO1B7	ENST00000554957	human	ensembl	74_37	+1	known	missense	c.869	p.R290K	0.013	pfam_OA_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO1B7	HGNC	ENSG00000205754	tier1	-	-	67	0	0.00	62	27	30.34
SLTM	0	genome.wustl.edu	37	15	59225696	59225696	+	Silent	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	15	59225696	59225696	G	T	SNP	SLTM	ENST00000380516	human	ensembl	74_37	-1	known	silent	c.69	p.T23	0.809	smart_SAP_dom,pfscan_SAP_dom	pfam_RRM_dom,pfam_SAP_dom,smart_SAP_dom,smart_RRM_dom,pfscan_SAP_dom,pfscan_RRM_dom	-	no_errors	SLTM	HGNC	ENSG00000137776				21	0	0.00	36	4	10.00
SMARCA4	0	genome.wustl.edu	37	19	11144146	11144146	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	19	11144146	11144146	C	T	SNP	SMARCA4	ENST00000358026	human	ensembl	74_37	+1	known	missense	c.3727	p.R1243W	0.997	pfscan_Helicase_C	pfam_SNF2_N,pfam_Bromodomain,pfam_BRK_domain,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,pfam_Gln-Leu-Gln_QLQ,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_Gln-Leu-Gln_QLQ,smart_HAS_subgr,smart_BRK_domain,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Bromodomain,prints_Bromodomain,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Bromodomain	-	no_errors	SMARCA4	HGNC	ENSG00000127616	tier1	-	-	35	0	0.00	32	15	31.91
SMARCA4	0	genome.wustl.edu	37	19	11144146	11144146	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	19	11144146	11144146	C	T	SNP	SMARCA4	ENST00000358026	human	ensembl	74_37	+1	known	missense	c.3727	p.R1243W	0.997	pfscan_Helicase_C	pfam_SNF2_N,pfam_Bromodomain,pfam_BRK_domain,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,pfam_Gln-Leu-Gln_QLQ,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_Gln-Leu-Gln_QLQ,smart_HAS_subgr,smart_BRK_domain,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Bromodomain,prints_Bromodomain,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Bromodomain	-	no_errors	SMARCA4	HGNC	ENSG00000127616	tier1	-	-	55	0	0.00	32	15	31.91
SMCO2	0	genome.wustl.edu	37	12	27627742	27627742	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	12	27627742	27627742	G	T	SNP	SMCO2	ENST00000416383	human	ensembl	74_37	+1	known	missense	c.258	p.E86D	0.037	NULL	NULL	-	no_errors	SMCO2	HGNC	ENSG00000165935	tier1	-	-	53	0	0.00	59	4	6.35
SMCO2	0	genome.wustl.edu	37	12	27627742	27627742	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	12	27627742	27627742	G	T	SNP	SMCO2	ENST00000416383	human	ensembl	74_37	+1	known	missense	c.258	p.E86D	0.037	NULL	NULL	-	no_errors	SMCO2	HGNC	ENSG00000165935	tier1	-	-	62	0	0.00	59	4	6.35
SMLR1	0	genome.wustl.edu	37	6	131148611	131148611	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	6	131148611	131148611	G	T	SNP	SMLR1	ENST00000541421	human	ensembl	74_37	+1	putative	missense	c.58	p.A20S	0.001	NULL	NULL	-	no_errors	SMLR1	HGNC	ENSG00000256162	tier1	-	-	110	0	0.00	93	5	5.10
SMLR1	0	genome.wustl.edu	37	6	131148611	131148611	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	6	131148611	131148611	G	T	SNP	SMLR1	ENST00000541421	human	ensembl	74_37	+1	putative	missense	c.58	p.A20S	0.001	NULL	NULL	-	no_errors	SMLR1	HGNC	ENSG00000256162	tier1	-	-	64	0	0.00	93	5	5.10
SMO	0	genome.wustl.edu	37	7	128850838	128850838	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	7	128850838	128850838	G	T	SNP	SMO	ENST00000249373	human	ensembl	74_37	+1	known	missense	c.1685	p.R562L	1.000	NULL	pfam_Frizzled,pfam_Frizzled_dom,pfam_GPCR_2_secretin-like,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	SMO	HGNC	ENSG00000128602				12	0	0.00	25	2	7.41
SNAPC3	0	genome.wustl.edu	37	9	15451373	15451373	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	9	15451373	15451373	G	T	SNP	SNAPC3	ENST00000380821	human	ensembl	74_37	+1	known	missense	c.788	p.R263I	1.000	pfam_snRNA-activating_su3	pfam_snRNA-activating_su3	-	no_errors	SNAPC3	HGNC	ENSG00000164975				21	0	0.00	38	4	9.52
SNORA72	0	genome.wustl.edu	37	8	99054503	99054504	+	RNA	INS	-	-	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	8	99054503	99054504	-	T	INS	SNORA72	ENST00000501016	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.001	-	-	-	no_errors	KB-1208A12.3	Clone_based_vega_gene	ENSG00000245970	tier1			18	0	0.00	30	3	9.09
SORCS1	0	genome.wustl.edu	37	10	108923969	108923969	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	10	108923969	108923969	C	T	SNP	SORCS1	ENST00000344440	human	ensembl	74_37	-1	known	missense	c.316	p.G106S	0.002	NULL	pfam_PKD_dom,superfamily_PKD_dom,smart_VPS10,pfscan_PKD_dom	-	no_errors	SORCS1	HGNC	ENSG00000108018	tier1	-	-	9	0	0.00	21	5	19.23
SPAG8	0	genome.wustl.edu	37	9	35809795	35809795	+	RNA	SNP	C	C	G			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	9	35809795	35809795	C	G	SNP	SPAG8	ENST00000489063	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.120	-	-	-	no_errors	SPAG8	HGNC	ENSG00000137098	tier1	-	-	23	0	0.00	21	9	30.00
SPAG8	0	genome.wustl.edu	37	9	35809795	35809795	+	RNA	SNP	C	C	G			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	9	35809795	35809795	C	G	SNP	SPAG8	ENST00000489063	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.120	-	-	-	no_errors	SPAG8	HGNC	ENSG00000137098	tier1	-	-	8	0	0.00	21	9	30.00
SPANXN1	0	genome.wustl.edu	37	X	144337320	144337320	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	X	144337320	144337320	A	T	SNP	SPANXN1	ENST00000370493	human	ensembl	74_37	+1	known	missense	c.205	p.N69Y	0.001	pfam_SPANX_prot	pfam_SPANX_prot	-	no_errors	SPANXN1	HGNC	ENSG00000203923	tier1	-	-	112	0	0.00	60	23	27.71
SPANXN1	0	genome.wustl.edu	37	X	144337320	144337320	+	Missense_Mutation	SNP	A	A	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	X	144337320	144337320	A	T	SNP	SPANXN1	ENST00000370493	human	ensembl	74_37	+1	known	missense	c.205	p.N69Y	0.001	pfam_SPANX_prot	pfam_SPANX_prot	-	no_errors	SPANXN1	HGNC	ENSG00000203923	tier1	-	-	72	0	0.00	60	23	27.71
SPATA21	0	genome.wustl.edu	37	1	16752165	16752165	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	16752165	16752165	G	T	SNP	SPATA21	ENST00000375577	human	ensembl	74_37	-1	known	missense	c.343	p.Q115K	0.003	NULL	NULL	-	no_errors	SPATA21	HGNC	ENSG00000187144	tier1	-	-	46	0	0.00	49	4	7.55
SPATA21	0	genome.wustl.edu	37	1	16752165	16752165	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	16752165	16752165	G	T	SNP	SPATA21	ENST00000375577	human	ensembl	74_37	-1	known	missense	c.343	p.Q115K	0.003	NULL	NULL	-	no_errors	SPATA21	HGNC	ENSG00000187144	tier1	-	-	82	0	0.00	49	4	7.55
SPINK5	0	genome.wustl.edu	37	5	147481362	147481362	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	5	147481362	147481362	C	T	SNP	SPINK5	ENST00000359874	human	ensembl	74_37	+1	known	missense	c.1321	p.R441C	0.023	smart_Kazal_dom	pfam_Kazal_dom,smart_Kazal_dom	-	no_errors	SPINK5	HGNC	ENSG00000133710	tier1	-	-	28	0	0.00	33	4	10.81
ST3GAL4	0	genome.wustl.edu	37	11	126283472	126283472	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	11	126283472	126283472	G	T	SNP	ST3GAL4	ENST00000356132	human	ensembl	74_37	+1	known	missense	c.862	p.G288C	1.000	pfam_Glyco_trans_29,pirsf_Sialyl_trans	pfam_Glyco_trans_29,pirsf_Sialyl_trans	-	no_errors	ST3GAL4	HGNC	ENSG00000110080	tier1	-	-	51	0	0.00	36	4	10.00
STX5	0	genome.wustl.edu	37	11	62595064	62595064	+	Silent	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	11	62595064	62595064	G	T	SNP	STX5	ENST00000294179	human	ensembl	74_37	-1	known	silent	c.265	p.R89	1.000	superfamily_t-SNARE	pfam_T_SNARE_dom,pfam_Syntaxin_N,superfamily_t-SNARE,smart_T_SNARE_dom,pfscan_T_SNARE_dom	-	no_errors	STX5	HGNC	ENSG00000162236				25	0	0.00	25	2	7.41
SULT2B1	0	genome.wustl.edu	37	19	49102487	49102487	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	19	49102487	49102487	C	T	SNP	SULT2B1	ENST00000201586	human	ensembl	74_37	+1	known	missense	c.922	p.P308S	0.546	NULL	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	SULT2B1	HGNC	ENSG00000088002				101	0	0.00	101	6	5.61
SURF2	0	genome.wustl.edu	37	9	136226967	136226967	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	9	136226967	136226967	G	T	SNP	SURF2	ENST00000371964	human	ensembl	74_37	+1	known	missense	c.479	p.G160V	0.007	pfam_Surf2	pfam_Surf2	-	no_errors	SURF2	HGNC	ENSG00000148291				34	0	0.00	46	4	8.00
SURF6	0	genome.wustl.edu	37	9	136198862	136198862	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	9	136198862	136198862	C	A	SNP	SURF6	ENST00000372022	human	ensembl	74_37	-1	known	missense	c.929	p.R310L	0.985	pfam_Surf6	pfam_Surf6	-	no_errors	SURF6	HGNC	ENSG00000148296				10	0	0.00	13	2	13.33
SWT1	0	genome.wustl.edu	37	1	185130022	185130022	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	185130022	185130022	G	T	SNP	SWT1	ENST00000367500	human	ensembl	74_37	+1	known	missense	c.49	p.D17Y	0.000	NULL	smart_PIN_dom	-	no_errors	SWT1	HGNC	ENSG00000116668				28	0	0.00	71	4	5.33
TAB2	0	genome.wustl.edu	37	6	149699391	149699391	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	6	149699391	149699391	G	T	SNP	TAB2	ENST00000286332	human	ensembl	74_37	+1	known	missense	c.340	p.G114C	0.998	NULL	pfam_CUE,pfam_Znf_RanBP2,smart_CUE,smart_Znf_RanBP2,pfscan_CUE,pfscan_Znf_RanBP2	-	no_errors	TAB2	HGNC	ENSG00000055208	tier1	-	-	37	0	0.00	46	4	8.00
TAB2	0	genome.wustl.edu	37	6	149699391	149699391	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	6	149699391	149699391	G	T	SNP	TAB2	ENST00000286332	human	ensembl	74_37	+1	known	missense	c.340	p.G114C	0.998	NULL	pfam_CUE,pfam_Znf_RanBP2,smart_CUE,smart_Znf_RanBP2,pfscan_CUE,pfscan_Znf_RanBP2	-	no_errors	TAB2	HGNC	ENSG00000055208	tier1	-	-	38	0	0.00	46	4	8.00
TAF1	0	genome.wustl.edu	37	X	70617240	70617240	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	X	70617240	70617240	C	T	SNP	TAF1	ENST00000449580	human	ensembl	74_37	+1	known	missense	c.3541	p.R1181C	1.000	pirsf_TAF1_animal	pirsf_TAF1_animal,pfam_TFIID_sub1_DUF3591,pfam_Bromodomain,pfam_TAF_II_230-bd,superfamily_Bromodomain,superfamily_TAF_II_230-bd,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain	-	no_errors	TAF1	HGNC	ENSG00000147133	tier1	-	-	50	0	0.00	40	15	27.27
TAF1	0	genome.wustl.edu	37	X	70617240	70617240	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	X	70617240	70617240	C	T	SNP	TAF1	ENST00000449580	human	ensembl	74_37	+1	known	missense	c.3541	p.R1181C	1.000	pirsf_TAF1_animal	pirsf_TAF1_animal,pfam_TFIID_sub1_DUF3591,pfam_Bromodomain,pfam_TAF_II_230-bd,superfamily_Bromodomain,superfamily_TAF_II_230-bd,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain	-	no_errors	TAF1	HGNC	ENSG00000147133	tier1	-	-	76	0	0.00	40	15	27.27
TAF1B	0	genome.wustl.edu	37	2	9989570	9989571	+	Frame_Shift_Ins	INS	-	-	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	9989570	9989571	-	A	INS	TAF1B	ENST00000263663	human	ensembl	74_37	+1	known	frame_shift_ins	c.186_187	p.N65fs	0.992:0.991	NULL	pfam_TF_Rrn7	-	no_errors	TAF1B	HGNC	ENSG00000115750	tier1			23	0	0.00	26	5	16.13
TBC1D21	0	genome.wustl.edu	37	15	74181427	74181427	+	Silent	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	15	74181427	74181427	G	A	SNP	TBC1D21	ENST00000300504	human	ensembl	74_37	+1	known	silent	c.996	p.K332	0.860	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D21	HGNC	ENSG00000167139	tier1	-	-	33	0	0.00	21	10	32.26
TBC1D21	0	genome.wustl.edu	37	15	74181427	74181427	+	Silent	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	15	74181427	74181427	G	A	SNP	TBC1D21	ENST00000300504	human	ensembl	74_37	+1	known	silent	c.996	p.K332	0.860	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D21	HGNC	ENSG00000167139	tier1	-	-	47	0	0.00	21	10	32.26
TFAP2C	0	genome.wustl.edu	37	20	55206907	55206907	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	20	55206907	55206907	G	A	SNP	TFAP2C	ENST00000201031	human	ensembl	74_37	+1	known	missense	c.581	p.R194H	1.000	NULL	pfam_TF_AP2_C,prints_TF_AP2_C,prints_TF_AP2_gamma	-	no_errors	TFAP2C	HGNC	ENSG00000087510				43	0	0.00	53	3	5.36
TFRC	0	genome.wustl.edu	37	3	195791279	195791279	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	3	195791279	195791279	C	A	SNP	TFRC	ENST00000360110	human	ensembl	74_37	-1	known	missense	c.1219	p.A407S	1.000	pfam_Peptidase_M28	pfam_TFR-like_dimer_dom,pfam_Peptidase_M28,pfam_Protease-assoc_domain,superfamily_TFR-like_dimer_dom	-	no_errors	TFRC	HGNC	ENSG00000072274	tier1	-	-	43	0	0.00	56	7	11.11
TFRC	0	genome.wustl.edu	37	3	195791279	195791279	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	3	195791279	195791279	C	A	SNP	TFRC	ENST00000360110	human	ensembl	74_37	-1	known	missense	c.1219	p.A407S	1.000	pfam_Peptidase_M28	pfam_TFR-like_dimer_dom,pfam_Peptidase_M28,pfam_Protease-assoc_domain,superfamily_TFR-like_dimer_dom	-	no_errors	TFRC	HGNC	ENSG00000072274	tier1	-	-	51	0	0.00	56	7	11.11
TH	0	genome.wustl.edu	37	11	2191949	2191949	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	11	2191949	2191949	G	T	SNP	TH	ENST00000381178	human	ensembl	74_37	-1	known	missense	c.154	p.P52T	0.000	pfam_Tyrosine_hydroxylase_CS,pirsf_Tyrosine_3-monooxygenase-like	pfam_Aromatic-AA_hydroxylase_C,pfam_Tyrosine_hydroxylase_CS,superfamily_Aromatic-AA_hydroxylase_C,pirsf_Tyrosine_3-monooxygenase-like,prints_Aromatic-AA_hydroxylase_C,tigrfam_Tyr_3_mOase	-	no_errors	TH	HGNC	ENSG00000180176	tier1	-	-	20	0	0.00	19	4	17.39
THYN1	0	genome.wustl.edu	37	11	134121080	134121080	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	11	134121080	134121080	G	T	SNP	THYN1	ENST00000341541	human	ensembl	74_37	-1	known	missense	c.166	p.H56N	0.991	pfam_EVE_domain,superfamily_PUA-like_domain	pfam_EVE_domain,superfamily_PUA-like_domain	-	no_errors	THYN1	HGNC	ENSG00000151500	tier1	-	-	39	0	0.00	42	4	8.70
THYN1	0	genome.wustl.edu	37	11	134121080	134121080	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	11	134121080	134121080	G	T	SNP	THYN1	ENST00000341541	human	ensembl	74_37	-1	known	missense	c.166	p.H56N	0.991	pfam_EVE_domain,superfamily_PUA-like_domain	pfam_EVE_domain,superfamily_PUA-like_domain	-	no_errors	THYN1	HGNC	ENSG00000151500	tier1	-	-	47	0	0.00	42	4	8.70
TLX1	0	genome.wustl.edu	37	10	102896595	102896595	+	Silent	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	10	102896595	102896595	G	A	SNP	TLX1	ENST00000370196	human	ensembl	74_37	+1	known	silent	c.918	p.L306	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	TLX1	HGNC	ENSG00000107807	tier1	-	-	33	0	0.00	35	4	10.26
TMEM132C	0	genome.wustl.edu	37	12	129189834	129189834	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	12	129189834	129189834	C	T	SNP	TMEM132C	ENST00000435159	human	ensembl	74_37	+1	known	missense	c.2321	p.T774M	0.996	NULL	NULL	-	no_errors	TMEM132C	HGNC	ENSG00000181234	tier1	-	-	24	0	0.00	34	15	30.61
TMEM132C	0	genome.wustl.edu	37	12	129189834	129189834	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	12	129189834	129189834	C	T	SNP	TMEM132C	ENST00000435159	human	ensembl	74_37	+1	known	missense	c.2321	p.T774M	0.996	NULL	NULL	-	no_errors	TMEM132C	HGNC	ENSG00000181234	tier1	-	-	44	0	0.00	34	15	30.61
TNIP1	0	genome.wustl.edu	37	5	150411870	150411870	+	Silent	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	5	150411870	150411870	G	A	SNP	TNIP1	ENST00000315050	human	ensembl	74_37	-1	known	silent	c.1854	p.P618	0.000	NULL	superfamily_ARM-type_fold	-	no_errors	TNIP1	HGNC	ENSG00000145901	tier1	-	-	52	0	0.00	48	18	27.27
TNIP1	0	genome.wustl.edu	37	5	150411870	150411870	+	Silent	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	5	150411870	150411870	G	A	SNP	TNIP1	ENST00000315050	human	ensembl	74_37	-1	known	silent	c.1854	p.P618	0.000	NULL	superfamily_ARM-type_fold	-	no_errors	TNIP1	HGNC	ENSG00000145901	tier1	-	-	77	0	0.00	48	18	27.27
TPSAB1	0	genome.wustl.edu	37	16	1291206	1291206	+	Silent	SNP	C	C	G			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	16	1291206	1291206	C	G	SNP	TPSAB1	ENST00000338844	human	ensembl	74_37	+1	known	silent	c.114	p.P38	0.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	TPSAB1	HGNC	ENSG00000172236	tier1	-	-	108	0	0.00	96	21	17.95
TPSAB1	0	genome.wustl.edu	37	16	1291206	1291206	+	Silent	SNP	C	C	G			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	16	1291206	1291206	C	G	SNP	TPSAB1	ENST00000338844	human	ensembl	74_37	+1	known	silent	c.114	p.P38	0.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	TPSAB1	HGNC	ENSG00000172236	tier1	-	-	86	0	0.00	96	21	17.95
TRIM58	0	genome.wustl.edu	37	1	248039251	248039251	+	Silent	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	248039251	248039251	C	T	SNP	TRIM58	ENST00000366481	human	ensembl	74_37	+1	known	silent	c.921	p.T307	0.000	superfamily_ConA-like_lec_gl_sf,smart_PRY,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM58	HGNC	ENSG00000162722	tier1	-	-	35	0	0.00	35	10	22.22
TRIM58	0	genome.wustl.edu	37	1	248039251	248039251	+	Silent	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	248039251	248039251	C	T	SNP	TRIM58	ENST00000366481	human	ensembl	74_37	+1	known	silent	c.921	p.T307	0.000	superfamily_ConA-like_lec_gl_sf,smart_PRY,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM58	HGNC	ENSG00000162722	tier1	-	-	39	0	0.00	35	10	22.22
TTN	0	genome.wustl.edu	37	2	179412140	179412140	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	179412140	179412140	G	C	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.86509	p.P28837A	1.000	superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	26	0	0.00	37	19	33.93
TTN	0	genome.wustl.edu	37	2	179412140	179412140	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	179412140	179412140	G	C	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.86509	p.P28837A	1.000	superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	40	0	0.00	37	19	33.93
TTN	0	genome.wustl.edu	37	2	179647087	179647087	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	179647087	179647087	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.3232	p.E1078K	1.000	superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	28	0	0.00	17	19	52.78
TTN	0	genome.wustl.edu	37	2	179647087	179647087	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	179647087	179647087	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.3232	p.E1078K	1.000	superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	56	0	0.00	17	19	52.78
TTN	0	genome.wustl.edu	37	2	179643819	179643819	+	Silent	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	179643819	179643819	G	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	silent	c.3990	p.R1330	0.998	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				15	0	0.00	27	2	6.90
UNC5D	0	genome.wustl.edu	37	8	35624506	35624506	+	Silent	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	8	35624506	35624506	C	A	SNP	UNC5D	ENST00000404895	human	ensembl	74_37	+1	known	silent	c.2400	p.T800	1.000	NULL	pfam_ZU5,pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,pfam_Death_domain,pfam_Immunoglobulin,superfamily_DEATH-like_dom,superfamily_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,smart_Thrombospondin_1_rpt,smart_ZU5,smart_Death_domain,pfscan_Thrombospondin_1_rpt,pfscan_ZU5,pfscan_Ig-like_dom	-	no_errors	UNC5D	HGNC	ENSG00000156687	tier1	-	-	25	0	0.00	35	18	33.96
UNC5D	0	genome.wustl.edu	37	8	35624506	35624506	+	Silent	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	8	35624506	35624506	C	A	SNP	UNC5D	ENST00000404895	human	ensembl	74_37	+1	known	silent	c.2400	p.T800	1.000	NULL	pfam_ZU5,pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,pfam_Death_domain,pfam_Immunoglobulin,superfamily_DEATH-like_dom,superfamily_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,smart_Thrombospondin_1_rpt,smart_ZU5,smart_Death_domain,pfscan_Thrombospondin_1_rpt,pfscan_ZU5,pfscan_Ig-like_dom	-	no_errors	UNC5D	HGNC	ENSG00000156687	tier1	-	-	39	0	0.00	35	18	33.96
UNC79	0	genome.wustl.edu	37	14	94038291	94038291	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	14	94038291	94038291	G	T	SNP	UNC79	ENST00000553484	human	ensembl	74_37	+1	known	missense	c.1807	p.G603C	1.000	NULL	superfamily_P-loop_NTPase,superfamily_ARM-type_fold	-	no_errors	UNC79	HGNC	ENSG00000133958				31	0	0.00	41	3	6.82
USP38	0	genome.wustl.edu	37	4	144107006	144107006	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	4	144107006	144107006	G	A	SNP	USP38	ENST00000307017	human	ensembl	74_37	+1	known	missense	c.403	p.V135M	1.000	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP38	HGNC	ENSG00000170185				18	0	0.00	38	2	5.00
USP51	0	genome.wustl.edu	37	X	55515327	55515327	+	Missense_Mutation	SNP	G	G	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	X	55515327	55515327	G	C	SNP	USP51	ENST00000500968	human	ensembl	74_37	-1	known	missense	c.46	p.R16G	0.000	NULL	pfam_Peptidase_C19/C67,pfam_Znf_UBP,pfscan_Znf_UBP,pfscan_Peptidase_C19/C67	-	no_errors	USP51	HGNC	ENSG00000247746				48	0	0.00	36	14	28.00
VPS13A	0	genome.wustl.edu	37	9	79972696	79972696	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	9	79972696	79972696	T	G	SNP	VPS13A	ENST00000360280	human	ensembl	74_37	+1	known	missense	c.7895	p.V2632G	0.998	NULL	pfam_VPSAP_dom,pfam_Autophagy-rel_C	-	no_errors	VPS13A	HGNC	ENSG00000197969	tier1	-	-	59	0	0.00	63	18	22.22
VPS13A	0	genome.wustl.edu	37	9	79972696	79972696	+	Missense_Mutation	SNP	T	T	G			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	9	79972696	79972696	T	G	SNP	VPS13A	ENST00000360280	human	ensembl	74_37	+1	known	missense	c.7895	p.V2632G	0.998	NULL	pfam_VPSAP_dom,pfam_Autophagy-rel_C	-	no_errors	VPS13A	HGNC	ENSG00000197969	tier1	-	-	69	0	0.00	63	18	22.22
VPS13D	0	genome.wustl.edu	37	1	12313875	12313875	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	12313875	12313875	G	T	SNP	VPS13D	ENST00000358136	human	ensembl	74_37	+1	known	nonsense	c.661	p.E221*	1.000	NULL	pfam_VPSAP_dom,pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	VPS13D	HGNC	ENSG00000048707	tier1	-	-	46	0	0.00	50	4	7.41
VPS13D	0	genome.wustl.edu	37	1	12313875	12313875	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	12313875	12313875	G	T	SNP	VPS13D	ENST00000358136	human	ensembl	74_37	+1	known	nonsense	c.661	p.E221*	1.000	NULL	pfam_VPSAP_dom,pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	VPS13D	HGNC	ENSG00000048707	tier1	-	-	54	0	0.00	50	4	7.41
WASF3	0	genome.wustl.edu	37	13	27216440	27216440	+	Silent	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	13	27216440	27216440	G	A	SNP	WASF3	ENST00000335327	human	ensembl	74_37	+1	known	silent	c.33	p.R11	1.000	NULL	pfam_WH2_dom,smart_WH2_dom,pfscan_WH2_dom	-	no_errors	WASF3	HGNC	ENSG00000132970	tier1	-	-	51	0	0.00	59	26	30.59
WASF3	0	genome.wustl.edu	37	13	27216440	27216440	+	Silent	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	13	27216440	27216440	G	A	SNP	WASF3	ENST00000335327	human	ensembl	74_37	+1	known	silent	c.33	p.R11	1.000	NULL	pfam_WH2_dom,smart_WH2_dom,pfscan_WH2_dom	-	no_errors	WASF3	HGNC	ENSG00000132970	tier1	-	-	64	0	0.00	59	26	30.59
WDR36	0	genome.wustl.edu	37	5	110428207	110428207	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	5	110428207	110428207	G	T	SNP	WDR36	ENST00000506538	human	ensembl	74_37	+1	known	missense	c.221	p.R74L	1.000	NULL	pfam_SSU_processome_Utp21,pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR36	HGNC	ENSG00000134987	tier1	-	-	29	0	0.00	38	4	9.52
WDR87	0	genome.wustl.edu	37	19	38383490	38383490	+	Silent	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	19	38383490	38383490	G	A	SNP	WDR87	ENST00000447313	human	ensembl	74_37	-1	known	silent	c.2853	p.Y951	0.999	superfamily_ARM-type_fold	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,superfamily_Quinolinate_PRibosylTrfase_C,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR87	HGNC	ENSG00000171804	tier1	-	-	39	0	0.00	28	12	30.00
ZCCHC8	0	genome.wustl.edu	37	12	122962497	122962497	+	Silent	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	12	122962497	122962497	C	A	SNP	ZCCHC8	ENST00000336229	human	ensembl	74_37	-1	known	silent	c.1236	p.V412	0.000	NULL	pfam_PSP,pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_Znf_CCHC,smart_PSP,pfscan_Znf_CCHC	-	no_errors	ZCCHC8	HGNC	ENSG00000033030				22	0	0.00	18	3	14.29
ZDHHC16	0	genome.wustl.edu	37	10	99211481	99211481	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	10	99211481	99211481	C	T	SNP	ZDHHC16	ENST00000370854	human	ensembl	74_37	+1	known	missense	c.49	p.R17C	1.000	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC16	HGNC	ENSG00000171307	tier1	-	-	16	0	0.00	17	11	39.29
ZEB2	0	genome.wustl.edu	37	2	145157786	145157786	+	Missense_Mutation	SNP	C	C	G			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	145157786	145157786	C	G	SNP	ZEB2	ENST00000303660	human	ensembl	74_37	-1	known	missense	c.968	p.G323A	1.000	smart_Znf_C2H2-like	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZEB2	HGNC	ENSG00000169554				36	0	0.00	68	6	8.11
ZFPM2	0	genome.wustl.edu	37	8	106815683	106815683	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	8	106815683	106815683	G	T	SNP	ZFPM2	ENST00000407775	human	ensembl	74_37	+1	known	missense	c.3373	p.D1125Y	1.000	smart_Znf_C2H2-like	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFPM2	HGNC	ENSG00000169946				20	0	0.00	33	2	5.71
ZMIZ1	0	genome.wustl.edu	37	10	81050766	81050766	+	Silent	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	10	81050766	81050766	C	T	SNP	ZMIZ1	ENST00000334512	human	ensembl	74_37	+1	known	silent	c.591	p.G197	0.998	NULL	pfam_Znf_MIZ,pfscan_Znf_MIZ	-	no_errors	ZMIZ1	HGNC	ENSG00000108175	tier1	-	-	34	0	0.00	60	4	6.25
ZMIZ1	0	genome.wustl.edu	37	10	81050766	81050766	+	Silent	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	10	81050766	81050766	C	T	SNP	ZMIZ1	ENST00000334512	human	ensembl	74_37	+1	known	silent	c.591	p.G197	0.998	NULL	pfam_Znf_MIZ,pfscan_Znf_MIZ	-	no_errors	ZMIZ1	HGNC	ENSG00000108175	tier1	-	-	37	0	0.00	60	4	6.25
ZMYM1	0	genome.wustl.edu	37	1	35579635	35579635	+	Missense_Mutation	SNP	A	A	G			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	35579635	35579635	A	G	SNP	ZMYM1	ENST00000359858	human	ensembl	74_37	+1	novel	missense	c.2204	p.K735R	1.000	superfamily_RNaseH-like_dom	pfam_Znf_MYM,pfam_HATC_dom_C,superfamily_RNaseH-like_dom,smart_TRASH_dom	-	no_errors	ZMYM1	HGNC	ENSG00000197056	tier1	-	-	39	0	0.00	29	10	25.00
ZMYM3	0	genome.wustl.edu	37	X	70462090	70462090	+	Silent	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	X	70462090	70462090	G	T	SNP	ZMYM3	ENST00000373988	human	ensembl	74_37	-1	known	silent	c.3738	p.T1246	0.998	pfam_DUF3504	pfam_Znf_MYM,pfam_DUF3504,smart_TRASH_dom	-	no_errors	ZMYM3	HGNC	ENSG00000147130	tier1	-	-	106	0	0.00	84	43	33.86
ZMYM3	0	genome.wustl.edu	37	X	70462090	70462090	+	Silent	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	X	70462090	70462090	G	T	SNP	ZMYM3	ENST00000373988	human	ensembl	74_37	-1	known	silent	c.3738	p.T1246	0.998	pfam_DUF3504	pfam_Znf_MYM,pfam_DUF3504,smart_TRASH_dom	-	no_errors	ZMYM3	HGNC	ENSG00000147130	tier1	-	-	131	0	0.00	84	43	33.86
ZNF423	0	genome.wustl.edu	37	16	49670652	49670652	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	16	49670652	49670652	C	T	SNP	ZNF423	ENST00000262383	human	ensembl	74_37	-1	known	missense	c.2411	p.S804N	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF423	HGNC	ENSG00000102935	tier1	-	-	13	0	0.00	14	6	30.00
ZNF423	0	genome.wustl.edu	37	16	49670652	49670652	+	Missense_Mutation	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	16	49670652	49670652	C	T	SNP	ZNF423	ENST00000262383	human	ensembl	74_37	-1	known	missense	c.2411	p.S804N	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF423	HGNC	ENSG00000102935	tier1	-	-	27	0	0.00	14	6	30.00
ZNF441	0	genome.wustl.edu	37	19	11889180	11889180	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	19	11889180	11889180	C	A	SNP	ZNF441	ENST00000357901	human	ensembl	74_37	+1	known	missense	c.166	p.Q56K	0.002	superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF441	HGNC	ENSG00000197044	tier1	-	-	65	0	0.00	61	26	29.89
ZNF496	0	genome.wustl.edu	37	1	247464284	247464284	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	247464284	247464284	G	A	SNP	ZNF496	ENST00000366498	human	ensembl	74_37	-1	known	missense	c.1409	p.P470L	0.348	pfscan_Znf_C2H2	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF496	HGNC	ENSG00000162714	tier1	-	-	35	0	0.00	28	11	28.21
ZNF496	0	genome.wustl.edu	37	1	247464284	247464284	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	247464284	247464284	G	A	SNP	ZNF496	ENST00000366498	human	ensembl	74_37	-1	known	missense	c.1409	p.P470L	0.348	pfscan_Znf_C2H2	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF496	HGNC	ENSG00000162714	tier1	-	-	43	0	0.00	28	11	28.21
ZNF644	0	genome.wustl.edu	37	1	91487584	91487584	+	RNA	SNP	G	G	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	91487584	91487584	G	C	SNP	ZNF644	ENST00000495966	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ZNF644	HGNC	ENSG00000122482	tier1	-	-	105	0	0.00	86	32	27.12
ZNF644	0	genome.wustl.edu	37	1	91487584	91487584	+	RNA	SNP	G	G	C			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	1	91487584	91487584	G	C	SNP	ZNF644	ENST00000495966	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ZNF644	HGNC	ENSG00000122482	tier1	-	-	67	0	0.00	86	32	27.12
ZNF664	0	genome.wustl.edu	37	12	124497201	124497201	+	Silent	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	12	124497201	124497201	C	A	SNP	ZNF664	ENST00000337815	human	ensembl	74_37	+1	known	silent	c.510	p.P170	0.994	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF664	HGNC	ENSG00000179195				24	0	0.00	35	4	10.26
ZNF676	0	genome.wustl.edu	37	19	22363008	22363008	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	19	22363008	22363008	C	A	SNP	ZNF676	ENST00000397121	human	ensembl	74_37	-1	known	missense	c.1511	p.R504L	0.515	pfscan_Znf_C2H2	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF676	HGNC	ENSG00000196109				33	0	0.00	24	2	7.69
ZNF729	0	genome.wustl.edu	37	19	22498307	22498307	+	Silent	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	19	22498307	22498307	C	T	SNP	ZNF729	ENST00000601693	human	ensembl	74_37	+1	novel	silent	c.2088	p.F696	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF729	HGNC	ENSG00000196350	tier1	-	-	48	0	0.00	39	9	18.75
ZNF729	0	genome.wustl.edu	37	19	22498307	22498307	+	Silent	SNP	C	C	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	19	22498307	22498307	C	T	SNP	ZNF729	ENST00000601693	human	ensembl	74_37	+1	novel	silent	c.2088	p.F696	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF729	HGNC	ENSG00000196350	tier1	-	-	49	0	0.00	39	9	18.75
ZNF784	0	genome.wustl.edu	37	19	56133379	56133379	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	19	56133379	56133379	G	A	SNP	ZNF784	ENST00000325351	human	ensembl	74_37	-1	known	missense	c.710	p.S237L	0.797	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF784	HGNC	ENSG00000179922	tier1	-	-	21	0	0.00	22	9	28.12
ZNF784	0	genome.wustl.edu	37	19	56133379	56133379	+	Missense_Mutation	SNP	G	G	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	19	56133379	56133379	G	A	SNP	ZNF784	ENST00000325351	human	ensembl	74_37	-1	known	missense	c.710	p.S237L	0.797	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF784	HGNC	ENSG00000179922	tier1	-	-	24	0	0.00	22	9	28.12
ZP2	0	genome.wustl.edu	37	16	21212735	21212735	+	Missense_Mutation	SNP	G	G	T			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	16	21212735	21212735	G	T	SNP	ZP2	ENST00000219593	human	ensembl	74_37	-1	known	missense	c.1649	p.T550N	0.003	pfam_ZP_dom,smart_ZP_dom,pfscan_ZP_dom,prints_ZP_dom	pfam_ZP_dom,smart_ZP_dom,pfscan_ZP_dom,prints_ZP_dom	-	no_errors	ZP2	HGNC	ENSG00000103310	tier1	-	-	63	0	0.00	66	4	5.71
ZRANB3	0	genome.wustl.edu	37	2	135960485	135960485	+	Missense_Mutation	SNP	C	C	A			TCGA-IC-A6RF-01A-13D-A33E-09	TCGA-IC-A6RF-10A-21D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0c1770c-8e08-4a0b-a96f-374b66ca6ddf	1c18afec-20fc-4456-9a04-f65fce56e159	2	135960485	135960485	C	A	SNP	ZRANB3	ENST00000264159	human	ensembl	74_37	-1	known	missense	c.3058	p.D1020Y	1.000	pfam_HNH,smart_HNH_nuc	pfam_SNF2_N,pfam_Helicase_C,pfam_HNH,pfam_Znf_RanBP2,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Znf_RanBP2,smart_HNH_nuc,pfscan_Znf_RanBP2,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ZRANB3	HGNC	ENSG00000121988				23	0	0.00	33	2	5.71
