Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ACSS1	0	genome.wustl.edu	37	20	24993469	24993469	+	Silent	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	20	24993469	24993469	G	A	SNP	ACSS1	ENST00000323482	human	ensembl	74_37	-1	known	silent	c.1686	p.T562	0.035	pfam_AMP-dep_Synth/Lig,tigrfam_Ac_CoA_lig	pfam_AMP-dep_Synth/Lig,tigrfam_Ac_CoA_lig	-	no_errors	ACSS1	HGNC	ENSG00000154930	tier1	-	-	48	0	0.00	117	13	10.00
ACSS1	0	genome.wustl.edu	37	20	24993469	24993469	+	Silent	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	20	24993469	24993469	G	A	SNP	ACSS1	ENST00000323482	human	ensembl	74_37	-1	known	silent	c.1686	p.T562	0.035	pfam_AMP-dep_Synth/Lig,tigrfam_Ac_CoA_lig	pfam_AMP-dep_Synth/Lig,tigrfam_Ac_CoA_lig	-	no_errors	ACSS1	HGNC	ENSG00000154930	tier1	-	-	56	0	0.00	117	13	10.00
ACSS3	0	genome.wustl.edu	37	12	81593158	81593158	+	Missense_Mutation	SNP	T	T	C			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	12	81593158	81593158	T	C	SNP	ACSS3	ENST00000548058	human	ensembl	74_37	+1	known	missense	c.1289	p.V430A	1.000	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSS3	HGNC	ENSG00000111058	tier1	-	-	25	0	0.00	25	6	19.35
ACSS3	0	genome.wustl.edu	37	12	81593158	81593158	+	Missense_Mutation	SNP	T	T	C			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	12	81593158	81593158	T	C	SNP	ACSS3	ENST00000548058	human	ensembl	74_37	+1	known	missense	c.1289	p.V430A	1.000	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSS3	HGNC	ENSG00000111058	tier1	-	-	31	0	0.00	25	6	19.35
ADAMTSL1	0	genome.wustl.edu	37	9	18775842	18775842	+	Silent	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	9	18775842	18775842	G	A	SNP	ADAMTSL1	ENST00000380548	human	ensembl	74_37	+1	novel	silent	c.2499	p.P833	0.013	superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,pfam_Immunoglobulin,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,prints_Peptidase_M12B_ADAM-TS,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	ADAMTSL1	HGNC	ENSG00000178031	tier1	-	-	51	0	0.00	39	15	27.27
ADAMTSL1	0	genome.wustl.edu	37	9	18775842	18775842	+	Silent	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	9	18775842	18775842	G	A	SNP	ADAMTSL1	ENST00000380548	human	ensembl	74_37	+1	novel	silent	c.2499	p.P833	0.013	superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,pfam_Immunoglobulin,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,prints_Peptidase_M12B_ADAM-TS,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	ADAMTSL1	HGNC	ENSG00000178031	tier1	-	-	65	0	0.00	39	15	27.27
ADCY10	0	genome.wustl.edu	37	1	167805612	167805612	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	1	167805612	167805612	C	T	SNP	ADCY10	ENST00000367851	human	ensembl	74_37	-1	known	missense	c.3244	p.D1082N	0.003	pirsf_Adenylate_cylcase_typ10	pfam_A/G_cyclase,superfamily_A/G_cyclase,superfamily_P-loop_NTPase,pirsf_Adenylate_cylcase_typ10,pfscan_A/G_cyclase	-	no_errors	ADCY10	HGNC	ENSG00000143199	tier1	-	-	14	0	0.00	8	11	57.89
ADCY10	0	genome.wustl.edu	37	1	167805612	167805612	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	1	167805612	167805612	C	T	SNP	ADCY10	ENST00000367851	human	ensembl	74_37	-1	known	missense	c.3244	p.D1082N	0.003	pirsf_Adenylate_cylcase_typ10	pfam_A/G_cyclase,superfamily_A/G_cyclase,superfamily_P-loop_NTPase,pirsf_Adenylate_cylcase_typ10,pfscan_A/G_cyclase	-	no_errors	ADCY10	HGNC	ENSG00000143199	tier1	-	-	27	0	0.00	8	11	57.89
AHNAK2	0	genome.wustl.edu	37	14	105418612	105418612	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	14	105418612	105418612	G	T	SNP	AHNAK2	ENST00000333244	human	ensembl	74_37	-1	known	missense	c.3176	p.A1059D	0.000	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567	tier1	-	-	91	0	0.00	114	12	9.52
AHNAK2	0	genome.wustl.edu	37	14	105418612	105418612	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	14	105418612	105418612	G	T	SNP	AHNAK2	ENST00000333244	human	ensembl	74_37	-1	known	missense	c.3176	p.A1059D	0.000	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567	tier1	-	-	94	0	0.00	114	12	9.52
AK9	0	genome.wustl.edu	37	6	109854548	109854548	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	6	109854548	109854548	C	T	SNP	AK9	ENST00000424296	human	ensembl	74_37	-1	known	missense	c.3476	p.R1159H	0.997	pfam_Adenylate_kin,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Adenylate_kin,pfam_YHS_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	AK9	HGNC	ENSG00000155085	tier1	-	-	50	0	0.00	33	12	26.09
AK9	0	genome.wustl.edu	37	6	109854548	109854548	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	6	109854548	109854548	C	T	SNP	AK9	ENST00000424296	human	ensembl	74_37	-1	known	missense	c.3476	p.R1159H	0.997	pfam_Adenylate_kin,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Adenylate_kin,pfam_YHS_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	AK9	HGNC	ENSG00000155085	tier1	-	-	56	0	0.00	33	12	26.09
ANAPC2	0	genome.wustl.edu	37	9	140070321	140070321	+	RNA	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	9	140070321	140070321	C	T	SNP	ANAPC2	ENST00000487917	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ANAPC2	HGNC	ENSG00000176248	tier1	-	-	36	0	0.00	46	7	13.21
ANAPC2	0	genome.wustl.edu	37	9	140070321	140070321	+	RNA	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	9	140070321	140070321	C	T	SNP	ANAPC2	ENST00000487917	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ANAPC2	HGNC	ENSG00000176248	tier1	-	-	56	0	0.00	46	7	13.21
ANK3	0	genome.wustl.edu	37	10	61829891	61829891	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	10	61829891	61829891	G	A	SNP	ANK3	ENST00000280772	human	ensembl	74_37	-1	known	missense	c.10748	p.T3583M	1.000	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK3	HGNC	ENSG00000151150	tier1	-	-	34	0	0.00	33	28	45.90
ANK3	0	genome.wustl.edu	37	10	61829891	61829891	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	10	61829891	61829891	G	A	SNP	ANK3	ENST00000280772	human	ensembl	74_37	-1	known	missense	c.10748	p.T3583M	1.000	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK3	HGNC	ENSG00000151150	tier1	-	-	40	0	0.00	33	28	45.90
ANKRD30BL	0	genome.wustl.edu	37	2	133015445	133015445	+	RNA	SNP	C	C	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	2	133015445	133015445	C	G	SNP	ANKRD30BL	ENST00000470729	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	ANKRD30BL	HGNC	ENSG00000163046	tier1	-	-	80	0	0.00	117	17	12.69
AOX1	0	genome.wustl.edu	37	2	201470309	201470309	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	2	201470309	201470309	G	T	SNP	AOX1	ENST00000374700	human	ensembl	74_37	+1	known	missense	c.865	p.D289Y	0.059	pfam_Mopterin_DH_FAD-bd,superfamily_FAD-bd_2,pirsf_Ald_Oxase/xanthine_DH,tigrfam_Aldehyde_oxidase	pfam_AldOxase/xan_DH_Mopterin-bd,pfam_Mopterin_DH_FAD-bd,pfam_Ald_Oxase/Xan_DH_a/b,pfam_2Fe-2S-bd,pfam_CO_DH_flav_C,pfam_2Fe-2S_ferredoxin-type,superfamily_AldOxase/xan_DH_Mopterin-bd,superfamily_FAD-bd_2,superfamily_Ald_Oxase/Xan_DH_a/b,superfamily_2Fe-2S-bd,superfamily_CO_DH_flav_C,superfamily_2Fe-2S_ferredoxin-type,pirsf_Ald_Oxase/xanthine_DH,pfscan_2Fe-2S_ferredoxin-type,tigrfam_Aldehyde_oxidase	-	no_errors	AOX1	HGNC	ENSG00000138356	tier1	-	-	46	0	0.00	51	14	21.54
AOX1	0	genome.wustl.edu	37	2	201470309	201470309	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	2	201470309	201470309	G	T	SNP	AOX1	ENST00000374700	human	ensembl	74_37	+1	known	missense	c.865	p.D289Y	0.059	pfam_Mopterin_DH_FAD-bd,superfamily_FAD-bd_2,pirsf_Ald_Oxase/xanthine_DH,tigrfam_Aldehyde_oxidase	pfam_AldOxase/xan_DH_Mopterin-bd,pfam_Mopterin_DH_FAD-bd,pfam_Ald_Oxase/Xan_DH_a/b,pfam_2Fe-2S-bd,pfam_CO_DH_flav_C,pfam_2Fe-2S_ferredoxin-type,superfamily_AldOxase/xan_DH_Mopterin-bd,superfamily_FAD-bd_2,superfamily_Ald_Oxase/Xan_DH_a/b,superfamily_2Fe-2S-bd,superfamily_CO_DH_flav_C,superfamily_2Fe-2S_ferredoxin-type,pirsf_Ald_Oxase/xanthine_DH,pfscan_2Fe-2S_ferredoxin-type,tigrfam_Aldehyde_oxidase	-	no_errors	AOX1	HGNC	ENSG00000138356	tier1	-	-	50	0	0.00	51	14	21.54
ARHGAP5	0	genome.wustl.edu	37	14	32561340	32561340	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	14	32561340	32561340	G	A	SNP	ARHGAP5	ENST00000345122	human	ensembl	74_37	+1	known	missense	c.1465	p.E489K	1.000	pfam_FF_domain,superfamily_FF_domain,smart_FF_domain	pfam_RhoGAP_dom,pfam_FF_domain,pfam_Small_GTPase,superfamily_Rho_GTPase_activation_prot,superfamily_P-loop_NTPase,superfamily_FF_domain,smart_FF_domain,smart_RhoGAP_dom,pfscan_RhoGAP_dom,prints_Small_GTPase	-	no_errors	ARHGAP5	HGNC	ENSG00000100852	tier1	rs78337553	-	37	0	0.00	64	6	8.57
ARHGEF10	0	genome.wustl.edu	37	8	1853763	1853763	+	Silent	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	8	1853763	1853763	C	T	SNP	ARHGEF10	ENST00000398564	human	ensembl	74_37	+1	known	silent	c.1923	p.L641	0.976	NULL	pfam_DH-domain,superfamily_DH-domain,superfamily_WD40_repeat_dom,smart_DH-domain,pfscan_DH-domain	-	no_errors	ARHGEF10	HGNC	ENSG00000104728	tier1	rs146717173	-	59	0	0.00	110	19	14.73
ARHGEF10	0	genome.wustl.edu	37	8	1853763	1853763	+	Silent	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	8	1853763	1853763	C	T	SNP	ARHGEF10	ENST00000398564	human	ensembl	74_37	+1	known	silent	c.1923	p.L641	0.976	NULL	pfam_DH-domain,superfamily_DH-domain,superfamily_WD40_repeat_dom,smart_DH-domain,pfscan_DH-domain	-	no_errors	ARHGEF10	HGNC	ENSG00000104728	tier1	rs146717173	-	64	0	0.00	110	19	14.73
ARVCF	0	genome.wustl.edu	37	22	19958768	19958768	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	22	19958768	19958768	C	T	SNP	ARVCF	ENST00000263207	human	ensembl	74_37	-1	known	missense	c.2872	p.V958I	0.998	NULL	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	ARVCF	HGNC	ENSG00000099889	tier1	rs72554700	-	31	0	0.00	40	9	18.37
ARVCF	0	genome.wustl.edu	37	22	19958768	19958768	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	22	19958768	19958768	C	T	SNP	ARVCF	ENST00000263207	human	ensembl	74_37	-1	known	missense	c.2872	p.V958I	0.998	NULL	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	ARVCF	HGNC	ENSG00000099889	tier1	rs72554700	-	50	0	0.00	40	9	18.37
ATL3	0	genome.wustl.edu	37	11	63426708	63426708	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	11	63426708	63426708	G	T	SNP	ATL3	ENST00000332645	human	ensembl	74_37	-1	known	missense	c.219	p.S73R	0.000	superfamily_P-loop_NTPase	pfam_Guanylate-bd_N,pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C,superfamily_P-loop_NTPase	-	no_errors	ATL3	HGNC	ENSG00000184743				35	0	0.00	38	2	5.00
ATP8A2	0	genome.wustl.edu	37	13	26106431	26106431	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	13	26106431	26106431	G	T	SNP	ATP8A2	ENST00000381655	human	ensembl	74_37	+1	known	missense	c.442	p.A148S	1.000	pfam_ATPase_P-typ_transduc_dom_A,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8A2	HGNC	ENSG00000132932				18	0	0.00	28	4	12.50
BBS10	0	genome.wustl.edu	37	12	76741020	76741020	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	12	76741020	76741020	G	T	SNP	BBS10	ENST00000393262	human	ensembl	74_37	-1	known	missense	c.745	p.R249S	1.000	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom	-	no_errors	BBS10	HGNC	ENSG00000179941				19	0	0.00	34	2	5.56
BRD2	0	genome.wustl.edu	37	6	32947844	32947844	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	6	32947844	32947844	C	T	SNP	BRD2	ENST00000395289	human	ensembl	74_37	+1	known	missense	c.2186	p.S729F	1.000	NULL	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD2	HGNC	ENSG00000204256	tier1	-	-	19	0	0.00	15	8	34.78
BRD2	0	genome.wustl.edu	37	6	32947844	32947844	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	6	32947844	32947844	C	T	SNP	BRD2	ENST00000395289	human	ensembl	74_37	+1	known	missense	c.2186	p.S729F	1.000	NULL	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD2	HGNC	ENSG00000204256	tier1	-	-	29	0	0.00	15	8	34.78
C11orf35	0	genome.wustl.edu	37	11	556252	556252	+	Silent	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	11	556252	556252	G	A	SNP	C11orf35	ENST00000329451	human	ensembl	74_37	-1	known	silent	c.1197	p.F399	0.913	pfam_Lamin_tail_dom	pfam_Lamin_tail_dom	-	no_errors	C11orf35	HGNC	ENSG00000185522	tier1	-	-	12	0	0.00	20	6	23.08
C5orf60	0	genome.wustl.edu	37	5	179069468	179069468	+	Missense_Mutation	SNP	A	A	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	5	179069468	179069468	A	G	SNP	C5orf60	ENST00000448248	human	ensembl	74_37	-1	known	missense	c.706	p.W236R	0.002	NULL	NULL	-	no_errors	C5orf60	HGNC	ENSG00000204661				94	0	0.00	67	4	5.63
CAPS2	0	genome.wustl.edu	37	12	75669885	75669885	+	RNA	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	12	75669885	75669885	C	T	SNP	CAPS2	ENST00000409004	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CAPS2	HGNC	ENSG00000180881	tier1	-	-	30	0	0.00	23	14	37.84
CAPS2	0	genome.wustl.edu	37	12	75669885	75669885	+	RNA	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	12	75669885	75669885	C	T	SNP	CAPS2	ENST00000409004	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CAPS2	HGNC	ENSG00000180881	tier1	-	-	32	0	0.00	23	14	37.84
CCAR2	0	genome.wustl.edu	37	8	22473699	22473699	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	8	22473699	22473699	G	T	SNP	CCAR2	ENST00000308511	human	ensembl	74_37	+1	known	missense	c.1783	p.V595F	0.988	NULL	superfamily_NA-bd_OB-fold	-	no_errors	CCAR2	HGNC	ENSG00000158941				24	0	0.00	34	4	10.53
CCL20	0	genome.wustl.edu	37	2	228680209	228680209	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	2	228680209	228680209	G	T	SNP	CCL20	ENST00000358813	human	ensembl	74_37	+1	known	missense	c.116	p.R39L	0.000	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	-	no_errors	CCL20	HGNC	ENSG00000115009	tier1	-	-	19	0	0.00	27	6	18.18
CCL20	0	genome.wustl.edu	37	2	228680209	228680209	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	2	228680209	228680209	G	T	SNP	CCL20	ENST00000358813	human	ensembl	74_37	+1	known	missense	c.116	p.R39L	0.000	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	-	no_errors	CCL20	HGNC	ENSG00000115009	tier1	-	-	20	0	0.00	27	6	18.18
CDC27	0	genome.wustl.edu	37	17	45234397	45234397	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	17	45234397	45234397	G	A	SNP	CDC27	ENST00000531206	human	ensembl	74_37	-1	known	missense	c.724	p.P242S	1.000	NULL	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	CDC27	HGNC	ENSG00000004897	tier1	rs7350908	-	41	0	0.00	45	5	10.00
CDH19	0	genome.wustl.edu	37	18	64172263	64172263	+	Missense_Mutation	SNP	T	T	C			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	18	64172263	64172263	T	C	SNP	CDH19	ENST00000262150	human	ensembl	74_37	-1	known	missense	c.2105	p.K702R	1.000	pfam_Cadherin_cytoplasmic-dom	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH19	HGNC	ENSG00000071991	tier1	-	-	27	0	0.00	50	6	10.71
CDH19	0	genome.wustl.edu	37	18	64211432	64211432	+	Silent	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	18	64211432	64211432	G	A	SNP	CDH19	ENST00000262150	human	ensembl	74_37	-1	known	silent	c.990	p.Y330	0.029	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH19	HGNC	ENSG00000071991	tier1	-	-	43	0	0.00	57	76	57.14
CDH19	0	genome.wustl.edu	37	18	64211432	64211432	+	Silent	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	18	64211432	64211432	G	A	SNP	CDH19	ENST00000262150	human	ensembl	74_37	-1	known	silent	c.990	p.Y330	0.029	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH19	HGNC	ENSG00000071991	tier1	-	-	65	0	0.00	57	76	57.14
CDH7	0	genome.wustl.edu	37	18	63430217	63430217	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	18	63430217	63430217	C	T	SNP	CDH7	ENST00000323011	human	ensembl	74_37	+1	known	missense	c.139	p.R47C	1.000	NULL	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH7	HGNC	ENSG00000081138	tier1	-	-	48	0	0.00	40	95	70.37
CDH7	0	genome.wustl.edu	37	18	63430217	63430217	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	18	63430217	63430217	C	T	SNP	CDH7	ENST00000323011	human	ensembl	74_37	+1	known	missense	c.139	p.R47C	1.000	NULL	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH7	HGNC	ENSG00000081138	tier1	-	-	64	0	0.00	40	95	70.37
CDK13	0	genome.wustl.edu	37	7	40027387	40027387	+	Silent	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	7	40027387	40027387	C	T	SNP	CDK13	ENST00000181839	human	ensembl	74_37	+1	known	silent	c.1401	p.A467	0.995	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK13	HGNC	ENSG00000065883	tier1	rs137937704	-	29	0	0.00	34	5	12.82
CDYL	0	genome.wustl.edu	37	6	4954289	4954289	+	Silent	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	6	4954289	4954289	G	A	SNP	CDYL	ENST00000328908	human	ensembl	74_37	+1	known	silent	c.1796	p.*599	0.999	NULL	pfam_Crotonase_core_superfam,pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow	-	no_errors	CDYL	HGNC	ENSG00000153046				25	0	0.00	25	4	13.79
CEL	0	genome.wustl.edu	37	9	135945988	135945988	+	Missense_Mutation	SNP	A	A	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	9	135945988	135945988	A	G	SNP	CEL	ENST00000372080	human	ensembl	74_37	+1	known	missense	c.1436	p.Q479R	0.831	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AB_hydrolase_3	-	no_errors	CEL	HGNC	ENSG00000170835	tier1	rs201074543	-	43	0	0.00	65	7	9.72
CHAF1A	0	genome.wustl.edu	37	19	4423372	4423372	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	19	4423372	4423372	C	T	SNP	CHAF1A	ENST00000301280	human	ensembl	74_37	+1	known	missense	c.1288	p.R430W	1.000	NULL	pfam_CAF1A	-	no_errors	CHAF1A	HGNC	ENSG00000167670	tier1	-	-	23	0	0.00	23	9	28.12
CHAF1A	0	genome.wustl.edu	37	19	4423372	4423372	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	19	4423372	4423372	C	T	SNP	CHAF1A	ENST00000301280	human	ensembl	74_37	+1	known	missense	c.1288	p.R430W	1.000	NULL	pfam_CAF1A	-	no_errors	CHAF1A	HGNC	ENSG00000167670	tier1	-	-	34	0	0.00	23	9	28.12
CHDC2	0	genome.wustl.edu	37	X	36162682	36162682	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	X	36162682	36162682	G	C	SNP	CHDC2	ENST00000313548	human	ensembl	74_37	+1	known	missense	c.1265	p.C422S	0.050	NULL	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain	-	no_errors	CHDC2	HGNC	ENSG00000176034				25	0	0.00	26	6	18.75
CHSY1	0	genome.wustl.edu	37	15	101718437	101718437	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	15	101718437	101718437	G	C	SNP	CHSY1	ENST00000254190	human	ensembl	74_37	-1	known	missense	c.1565	p.S522W	0.872	pfam_Chond_GalNAc	pfam_Chond_GalNAc,pfam_Fringe-like	-	no_errors	CHSY1	HGNC	ENSG00000131873	tier1	-	-	30	0	0.00	40	10	20.00
CHSY1	0	genome.wustl.edu	37	15	101718437	101718437	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	15	101718437	101718437	G	C	SNP	CHSY1	ENST00000254190	human	ensembl	74_37	-1	known	missense	c.1565	p.S522W	0.872	pfam_Chond_GalNAc	pfam_Chond_GalNAc,pfam_Fringe-like	-	no_errors	CHSY1	HGNC	ENSG00000131873	tier1	-	-	31	0	0.00	40	10	20.00
COL6A3	0	genome.wustl.edu	37	2	238280601	238280601	+	Silent	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	2	238280601	238280601	G	A	SNP	COL6A3	ENST00000295550	human	ensembl	74_37	-1	known	silent	c.4059	p.D1353	0.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,smart_VWF_A,smart_Prot_inh_Kunz-m,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL6A3	HGNC	ENSG00000163359	tier1	-	-	35	0	0.00	18	13	41.94
COL6A3	0	genome.wustl.edu	37	2	238280601	238280601	+	Silent	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	2	238280601	238280601	G	A	SNP	COL6A3	ENST00000295550	human	ensembl	74_37	-1	known	silent	c.4059	p.D1353	0.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,smart_VWF_A,smart_Prot_inh_Kunz-m,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL6A3	HGNC	ENSG00000163359	tier1	-	-	39	0	0.00	18	13	41.94
COX8C	0	genome.wustl.edu	37	14	93813699	93813699	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	14	93813699	93813699	G	A	SNP	COX8C	ENST00000342144	human	ensembl	74_37	+1	known	missense	c.85	p.A29T	0.001	NULL	pfam_Cyt_c_oxidase_su8,superfamily_Cyt_c_oxidase_su8	-	no_errors	COX8C	HGNC	ENSG00000187581	tier1	-	-	13	0	0.00	15	19	55.88
CSMD1	0	genome.wustl.edu	37	8	2986325	2986326	+	RNA	INS	-	-	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	8	2986325	2986326	-	T	INS	CSMD1	ENST00000523387	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.001	-	-	-	no_errors	CSMD1	HGNC	ENSG00000183117	tier1			13	0	0.00	35	7	16.67
CSMD1	0	genome.wustl.edu	37	8	2986325	2986326	+	RNA	INS	-	-	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	8	2986325	2986326	-	T	INS	CSMD1	ENST00000523387	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.001	-	-	-	no_errors	CSMD1	HGNC	ENSG00000183117	tier1			16	0	0.00	35	7	16.67
CXorf67	0	genome.wustl.edu	37	X	51150911	51150911	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	X	51150911	51150911	G	A	SNP	CXorf67	ENST00000342995	human	ensembl	74_37	+1	known	missense	c.1043	p.R348H	0.000	NULL	NULL	-	no_errors	CXorf67	HGNC	ENSG00000187690	tier1	-	-	104	0	0.00	92	11	10.58
CXorf67	0	genome.wustl.edu	37	X	51150911	51150911	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	X	51150911	51150911	G	A	SNP	CXorf67	ENST00000342995	human	ensembl	74_37	+1	known	missense	c.1043	p.R348H	0.000	NULL	NULL	-	no_errors	CXorf67	HGNC	ENSG00000187690	tier1	-	-	83	0	0.00	92	11	10.58
DEFB124	0	genome.wustl.edu	37	20	30060720	30060721	+	RNA	INS	-	-	CA			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	20	30060720	30060721	-	CA	INS	DEFB124	ENST00000481595	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.259:0.435	-	-	-	no_errors	DEFB124	HGNC	ENSG00000180383	tier1			8	0	0.00	16	12	42.86
DIAPH2	0	genome.wustl.edu	37	X	96013192	96013192	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	X	96013192	96013192	C	T	SNP	DIAPH2	ENST00000324765	human	ensembl	74_37	+1	known	nonsense	c.382	p.R128*	1.000	pfam_GTPase-bd,superfamily_ARM-type_fold	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,pfam_Drf_DAD,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	DIAPH2	HGNC	ENSG00000147202	tier1	-	-	33	0	0.00	47	4	7.84
DIAPH2	0	genome.wustl.edu	37	X	96013192	96013192	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	X	96013192	96013192	C	T	SNP	DIAPH2	ENST00000324765	human	ensembl	74_37	+1	known	nonsense	c.382	p.R128*	1.000	pfam_GTPase-bd,superfamily_ARM-type_fold	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,pfam_Drf_DAD,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	DIAPH2	HGNC	ENSG00000147202	tier1	-	-	34	0	0.00	47	4	7.84
DMRTC1	0	genome.wustl.edu	37	X	72094776	72094776	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	X	72094776	72094776	G	A	SNP	DMRTC1	ENST00000373529	human	ensembl	74_37	-1	known	missense	c.140	p.A47V	0.001	NULL	NULL	-	no_errors	DMRTC1	HGNC	ENSG00000159123	tier1	rs200698413	-	9	0	0.00	4	4	50.00
DNAH10	0	genome.wustl.edu	37	12	124256179	124256179	+	Silent	SNP	A	A	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	12	124256179	124256179	A	G	SNP	DNAH10	ENST00000409039	human	ensembl	74_37	+1	known	silent	c.147	p.L49	0.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_PyrdxlP-dep_Trfase,smart_AAA+_ATPase	-	no_errors	DNAH10	HGNC	ENSG00000197653	tier1	-	-	24	0	0.00	20	15	42.86
DNAH10	0	genome.wustl.edu	37	12	124256179	124256179	+	Silent	SNP	A	A	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	12	124256179	124256179	A	G	SNP	DNAH10	ENST00000409039	human	ensembl	74_37	+1	known	silent	c.147	p.L49	0.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_PyrdxlP-dep_Trfase,smart_AAA+_ATPase	-	no_errors	DNAH10	HGNC	ENSG00000197653	tier1	-	-	25	0	0.00	20	15	42.86
DNAJC12	0	genome.wustl.edu	37	10	69571381	69571381	+	Silent	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	10	69571381	69571381	C	T	SNP	DNAJC12	ENST00000225171	human	ensembl	74_37	-1	known	silent	c.198	p.L66	1.000	pfam_DnaJ_domain,superfamily_DnaJ_domain,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	pfam_DnaJ_domain,superfamily_DnaJ_domain,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJC12	HGNC	ENSG00000108176	tier1	-	-	38	0	0.00	20	19	48.72
DNAJC12	0	genome.wustl.edu	37	10	69571381	69571381	+	Silent	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	10	69571381	69571381	C	T	SNP	DNAJC12	ENST00000225171	human	ensembl	74_37	-1	known	silent	c.198	p.L66	1.000	pfam_DnaJ_domain,superfamily_DnaJ_domain,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	pfam_DnaJ_domain,superfamily_DnaJ_domain,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJC12	HGNC	ENSG00000108176	tier1	-	-	48	0	0.00	20	19	48.72
DNM1P47	0	genome.wustl.edu	37	15	102304262	102304264	+	RNA	DEL	GCT	GCT	-			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	GCT	GCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	15	102304262	102304264	GCT	-	DEL	DNM1P47	ENST00000561463	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.999:1.000:1.000	-	-	-	no_errors	DNM1P47	HGNC	ENSG00000259660	tier1			9	0	0.00	5	3	37.50
DPP6	0	genome.wustl.edu	37	7	154681223	154681223	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	7	154681223	154681223	G	A	SNP	DPP6	ENST00000377770	human	ensembl	74_37	+1	known	missense	c.2434	p.A812T	1.000	pfam_Peptidase_S9	pfam_Peptidase_S9B,pfam_Peptidase_S9,pfam_PD40	-	no_errors	DPP6	HGNC	ENSG00000130226	tier1	-	-	29	0	0.00	28	6	17.65
DPP6	0	genome.wustl.edu	37	7	154681223	154681223	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	7	154681223	154681223	G	A	SNP	DPP6	ENST00000377770	human	ensembl	74_37	+1	known	missense	c.2434	p.A812T	1.000	pfam_Peptidase_S9	pfam_Peptidase_S9B,pfam_Peptidase_S9,pfam_PD40	-	no_errors	DPP6	HGNC	ENSG00000130226	tier1	-	-	34	0	0.00	28	6	17.65
DSEL	0	genome.wustl.edu	37	18	65181541	65181541	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	18	65181541	65181541	G	C	SNP	DSEL	ENST00000310045	human	ensembl	74_37	-1	known	missense	c.335	p.T112R	0.014	NULL	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,superfamily_Chondroitin_lyas	-	no_errors	DSEL	HGNC	ENSG00000171451	tier1	-	-	43	0	0.00	94	12	11.32
DSEL	0	genome.wustl.edu	37	18	65181541	65181541	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	18	65181541	65181541	G	C	SNP	DSEL	ENST00000310045	human	ensembl	74_37	-1	known	missense	c.335	p.T112R	0.014	NULL	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,superfamily_Chondroitin_lyas	-	no_errors	DSEL	HGNC	ENSG00000171451	tier1	-	-	68	0	0.00	94	12	11.32
DST	0	genome.wustl.edu	37	6	56494092	56494092	+	Silent	SNP	T	T	C			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	6	56494092	56494092	T	C	SNP	DST	ENST00000370754	human	ensembl	74_37	-1	known	silent	c.4332	p.Q1444	0.988	superfamily_ABC1_TM_dom	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	DST	HGNC	ENSG00000151914	tier1	-	-	63	0	0.00	38	37	49.33
DST	0	genome.wustl.edu	37	6	56494092	56494092	+	Silent	SNP	T	T	C			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	6	56494092	56494092	T	C	SNP	DST	ENST00000370754	human	ensembl	74_37	-1	known	silent	c.4332	p.Q1444	0.988	superfamily_ABC1_TM_dom	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	DST	HGNC	ENSG00000151914	tier1	-	-	76	0	0.00	38	37	49.33
DUOXA2	0	genome.wustl.edu	37	15	45406923	45406923	+	Silent	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	15	45406923	45406923	C	T	SNP	DUOXA2	ENST00000323030	human	ensembl	74_37	+1	known	silent	c.120	p.L40	1.000	pfam_Dual_oxidase_maturation_fac	pfam_Dual_oxidase_maturation_fac	-	no_errors	DUOXA2	HGNC	ENSG00000140274	tier1	-	-	76	0	0.00	67	14	17.28
DUOXA2	0	genome.wustl.edu	37	15	45406923	45406923	+	Silent	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	15	45406923	45406923	C	T	SNP	DUOXA2	ENST00000323030	human	ensembl	74_37	+1	known	silent	c.120	p.L40	1.000	pfam_Dual_oxidase_maturation_fac	pfam_Dual_oxidase_maturation_fac	-	no_errors	DUOXA2	HGNC	ENSG00000140274	tier1	-	-	84	0	0.00	67	14	17.28
EIF4G3	0	genome.wustl.edu	37	1	21191175	21191175	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	1	21191175	21191175	G	T	SNP	EIF4G3	ENST00000374937	human	ensembl	74_37	-1	known	missense	c.2650	p.L884M	1.000	pfam_MIF4G-like_typ-3,superfamily_ARM-type_fold,smart_MIF4G-like_typ-3	pfam_MIF4G-like_typ-3,pfam_Initiation_fac_eIF4g_MI,pfam_W2_domain,superfamily_ARM-type_fold,smart_MIF4G-like_typ-3,smart_Initiation_fac_eIF4g_MI,smart_W2_domain	-	no_errors	EIF4G3	HGNC	ENSG00000075151				36	0	0.00	61	4	6.15
EIF5	0	genome.wustl.edu	37	14	103804756	103804757	+	In_Frame_Ins	INS	-	-	CAC			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	14	103804756	103804757	-	CAC	INS	EIF5	ENST00000216554	human	ensembl	74_37	+1	known	in_frame_ins	c.532_533	p.182in_frame_insP	1.000:1.000	NULL	pfam_Transl_init_fac_IF2/IF5,pfam_W2_domain,superfamily_ARM-type_fold,superfamily_Transl_init_fac_IF2/IF5_N,superfamily_Transl_init_fac_IF2/IF5_Zn-bd,smart_Transl_init_fac_IF2/IF5,smart_W2_domain	-	no_errors	EIF5	HGNC	ENSG00000100664	tier1			11	0	0.00	14	9	39.13
ENSG00000182873	0	genome.wustl.edu	37	1	2113691	2113691	+	RNA	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	1	2113691	2113691	G	T	SNP	ENSG00000182873	ENST00000333854	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	RP11-181G12.2	Clone_based_vega_gene	ENSG00000182873	tier1	-	-	61	0	0.00	38	20	34.48
ENSG00000182873	0	genome.wustl.edu	37	1	2113691	2113691	+	RNA	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	1	2113691	2113691	G	T	SNP	ENSG00000182873	ENST00000333854	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	RP11-181G12.2	Clone_based_vega_gene	ENSG00000182873	tier1	-	-	64	0	0.00	38	20	34.48
ENSG00000188850	0	genome.wustl.edu	37	5	43348816	43348817	+	RNA	INS	-	-	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	5	43348816	43348817	-	A	INS	ENSG00000188850	ENST00000511991	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	RP11-159F24.2	Clone_based_vega_gene	ENSG00000188850	tier1			11	0	0.00	11	3	21.43
ENSG00000212884	0	genome.wustl.edu	37	GL000205.1	117787	117787	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	GL000205.1	117787	117787	G	A	SNP	ENSG00000212884	ENST00000391571	human	ensembl	74_37	+1	known	missense	c.418	p.G140R	NULL	NULL	pfam_D-isomer_2_OHA_DH_cat_dom	-	no_errors	AC011841.1	Clone_based_ensembl_gene	ENSG00000212884	tier1	-	-	83	0	0.00	82	20	19.61
ENSG00000255621	0	genome.wustl.edu	37	12	13153388	13153388	+	RNA	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	12	13153388	13153388	G	T	SNP	ENSG00000255621	ENST00000543321	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.055	-	-	-	no_errors	RP11-377D9.3	Clone_based_vega_gene	ENSG00000255621	tier1	rs77117939	-	13	0	0.00	6	4	40.00
ENSG00000272851	0	genome.wustl.edu	37	2	208619067	208619067	+	RNA	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	2	208619067	208619067	G	A	SNP	ENSG00000272851	ENST00000609146	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-801F7.1	Clone_based_vega_gene	ENSG00000272851	tier1	rs74909259	-	32	0	0.00	46	4	8.00
EPHA1-AS1	0	genome.wustl.edu	37	7	143219877	143219877	+	RNA	SNP	G	G	C			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	7	143219877	143219877	G	C	SNP	EPHA1-AS1	ENST00000429289	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.018	-	-	-	no_errors	EPHA1-AS1	HGNC	ENSG00000229153	tier1	-	-	18	0	0.00	38	9	19.15
EPHA1-AS1	0	genome.wustl.edu	37	7	143219877	143219877	+	RNA	SNP	G	G	C			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	7	143219877	143219877	G	C	SNP	EPHA1-AS1	ENST00000429289	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.018	-	-	-	no_errors	EPHA1-AS1	HGNC	ENSG00000229153	tier1	-	-	20	0	0.00	38	9	19.15
ERBB3	0	genome.wustl.edu	37	12	56494025	56494025	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	12	56494025	56494025	G	T	SNP	ERBB3	ENST00000267101	human	ensembl	74_37	+1	known	missense	c.3197	p.C1066F	0.002	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Furin-like_Cys-rich_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ERBB3	HGNC	ENSG00000065361	tier1	-	-	31	0	0.00	36	12	25.00
ERBB3	0	genome.wustl.edu	37	12	56494025	56494025	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	12	56494025	56494025	G	T	SNP	ERBB3	ENST00000267101	human	ensembl	74_37	+1	known	missense	c.3197	p.C1066F	0.002	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Furin-like_Cys-rich_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ERBB3	HGNC	ENSG00000065361	tier1	-	-	35	0	0.00	36	12	25.00
ESR2	0	genome.wustl.edu	37	14	64727213	64727213	+	Silent	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	14	64727213	64727213	G	A	SNP	ESR2	ENST00000341099	human	ensembl	74_37	-1	known	silent	c.906	p.A302	0.007	superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_Str_hrmn_rcpt	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Estrogen_rcpt_beta_N,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	ESR2	HGNC	ENSG00000140009	tier1	-	-	51	0	0.00	46	27	36.99
ESR2	0	genome.wustl.edu	37	14	64727213	64727213	+	Silent	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	14	64727213	64727213	G	A	SNP	ESR2	ENST00000341099	human	ensembl	74_37	-1	known	silent	c.906	p.A302	0.007	superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_Str_hrmn_rcpt	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Estrogen_rcpt_beta_N,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	ESR2	HGNC	ENSG00000140009	tier1	-	-	77	0	0.00	46	27	36.99
FAM126B	0	genome.wustl.edu	37	2	201846546	201846546	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	2	201846546	201846546	G	A	SNP	FAM126B	ENST00000418596	human	ensembl	74_37	-1	known	missense	c.1040	p.A347V	1.000	NULL	pfam_Hyccin	-	no_errors	FAM126B	HGNC	ENSG00000155744	tier1	-	-	19	0	0.00	31	12	27.91
FAM126B	0	genome.wustl.edu	37	2	201846546	201846546	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	2	201846546	201846546	G	A	SNP	FAM126B	ENST00000418596	human	ensembl	74_37	-1	known	missense	c.1040	p.A347V	1.000	NULL	pfam_Hyccin	-	no_errors	FAM126B	HGNC	ENSG00000155744	tier1	-	-	25	0	0.00	31	12	27.91
FAM138D	0	genome.wustl.edu	37	12	148078	148078	+	RNA	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	12	148078	148078	G	A	SNP	FAM138D	ENST00000320165	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FAM138D	HGNC	ENSG00000206114	tier1	rs8181620	-	8	0	0.00	5	7	58.33
FAM182B	0	genome.wustl.edu	37	20	25745639	25745640	+	Splice_Site	INS	-	-	AGAG			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	20	25745639	25745640	-	AGAG	INS	FAM182B	ENST00000376404	human	ensembl	74_37	-1	known	splice_site_ins	c.202-3_202-2	e2-2	0.078:0.082	-	-	-	no_errors	FAM182B	HGNC	ENSG00000175170	tier1			23	0	0.00	61	16	20.78
FCRL4	0	genome.wustl.edu	37	1	157551430	157551430	+	Silent	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	1	157551430	157551430	G	A	SNP	FCRL4	ENST00000271532	human	ensembl	74_37	-1	known	silent	c.1140	p.T380	0.000	NULL	pfam_Immunoglobulin,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	FCRL4	HGNC	ENSG00000163518	tier1	-	-	25	0	0.00	34	13	27.66
FCRL4	0	genome.wustl.edu	37	1	157551430	157551430	+	Silent	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	1	157551430	157551430	G	A	SNP	FCRL4	ENST00000271532	human	ensembl	74_37	-1	known	silent	c.1140	p.T380	0.000	NULL	pfam_Immunoglobulin,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	FCRL4	HGNC	ENSG00000163518	tier1	-	-	36	0	0.00	34	13	27.66
FPGT-TNNI3K	0	genome.wustl.edu	37	1	74957871	74957871	+	Missense_Mutation	SNP	A	A	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	1	74957871	74957871	A	G	SNP	FPGT-TNNI3K	ENST00000557284	human	ensembl	74_37	+1	known	missense	c.2614	p.S872G	1.000	NULL	pfam_Ankyrin_rpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom,prints_Ankyrin_rpt,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	FPGT-TNNI3K	HGNC	ENSG00000259030	tier1	-	-	51	0	0.00	63	7	10.00
FPGT-TNNI3K	0	genome.wustl.edu	37	1	74957871	74957871	+	Missense_Mutation	SNP	A	A	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	1	74957871	74957871	A	G	SNP	FPGT-TNNI3K	ENST00000557284	human	ensembl	74_37	+1	known	missense	c.2614	p.S872G	1.000	NULL	pfam_Ankyrin_rpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom,prints_Ankyrin_rpt,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	FPGT-TNNI3K	HGNC	ENSG00000259030	tier1	-	-	59	0	0.00	63	7	10.00
GABBR2	0	genome.wustl.edu	37	9	101340276	101340276	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	9	101340276	101340276	C	T	SNP	GABBR2	ENST00000259455	human	ensembl	74_37	-1	known	missense	c.400	p.V134I	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_GPCR_3	pfam_GPCR_3_C,pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_GPCR_3_GABA_rcpt_B2,prints_GPCR_3_GABA_rcpt_B,prints_GPCR_3_GABA_rcpt_B1,prints_GPCR_3,pfscan_GPCR_3_C	-	no_errors	GABBR2	HGNC	ENSG00000136928	tier1	-	-	47	0	0.00	57	7	10.94
GABBR2	0	genome.wustl.edu	37	9	101340276	101340276	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	9	101340276	101340276	C	T	SNP	GABBR2	ENST00000259455	human	ensembl	74_37	-1	known	missense	c.400	p.V134I	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_GPCR_3	pfam_GPCR_3_C,pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_GPCR_3_GABA_rcpt_B2,prints_GPCR_3_GABA_rcpt_B,prints_GPCR_3_GABA_rcpt_B1,prints_GPCR_3,pfscan_GPCR_3_C	-	no_errors	GABBR2	HGNC	ENSG00000136928	tier1	-	-	59	0	0.00	57	7	10.94
GIGYF2	0	genome.wustl.edu	37	2	233651989	233651989	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	2	233651989	233651989	G	A	SNP	GIGYF2	ENST00000373566	human	ensembl	74_37	+1	known	missense	c.728	p.R243Q	0.999	NULL	pfam_GYF,superfamily_GYF,smart_GYF,pfscan_GYF	-	no_errors	GIGYF2	HGNC	ENSG00000204120	tier1	-	-	46	0	0.00	52	6	10.34
GLI3	0	genome.wustl.edu	37	7	42005959	42005959	+	Silent	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	7	42005959	42005959	G	A	SNP	GLI3	ENST00000395925	human	ensembl	74_37	-1	known	silent	c.2712	p.R904	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI3	HGNC	ENSG00000106571	tier1	-	-	36	0	0.00	30	19	38.78
GLUD2	0	genome.wustl.edu	37	X	120182347	120182347	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	X	120182347	120182347	C	A	SNP	GLUD2	ENST00000328078	human	ensembl	74_37	+1	known	missense	c.809	p.S270Y	0.995	pfam_Glu/Leu/Phe/Val_DH_C,smart_Glu/Leu/Phe/Val_DH_C,prints_Glu/Leu/Phe/Val_DH	pfam_Glu/Leu/Phe/Val_DH_C,pfam_Glu/Leu/Phe/Val_DH_dimer_dom,smart_Glu/Leu/Phe/Val_DH_C,prints_Glu/Leu/Phe/Val_DH	-	no_errors	GLUD2	HGNC	ENSG00000182890	tier1	-	-	103	0	0.00	105	19	15.32
GLUD2	0	genome.wustl.edu	37	X	120182347	120182347	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	X	120182347	120182347	C	A	SNP	GLUD2	ENST00000328078	human	ensembl	74_37	+1	known	missense	c.809	p.S270Y	0.995	pfam_Glu/Leu/Phe/Val_DH_C,smart_Glu/Leu/Phe/Val_DH_C,prints_Glu/Leu/Phe/Val_DH	pfam_Glu/Leu/Phe/Val_DH_C,pfam_Glu/Leu/Phe/Val_DH_dimer_dom,smart_Glu/Leu/Phe/Val_DH_C,prints_Glu/Leu/Phe/Val_DH	-	no_errors	GLUD2	HGNC	ENSG00000182890	tier1	-	-	117	0	0.00	105	19	15.32
GNG4	0	genome.wustl.edu	37	1	235715256	235715256	+	RNA	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	1	235715256	235715256	C	T	SNP	GNG4	ENST00000484517	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GNG4	HGNC	ENSG00000168243	tier1	-	-	8	0	0.00	11	4	26.67
GNG4	0	genome.wustl.edu	37	1	235715256	235715256	+	RNA	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	1	235715256	235715256	C	T	SNP	GNG4	ENST00000484517	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GNG4	HGNC	ENSG00000168243	tier1	-	-	9	0	0.00	11	4	26.67
GNPTAB	0	genome.wustl.edu	37	12	102158696	102158696	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	12	102158696	102158696	C	G	SNP	GNPTAB	ENST00000299314	human	ensembl	74_37	-1	known	missense	c.1999	p.E667Q	1.000	NULL	pfam_DMAP1-bd,pfam_Notch_dom,pfam_DUF3184,superfamily_Notch_dom,smart_Notch_dom,pfscan_EF_hand_dom,pfscan_Notch_dom	-	no_errors	GNPTAB	HGNC	ENSG00000111670	tier1	-	-	27	0	0.00	27	13	32.50
GNPTAB	0	genome.wustl.edu	37	12	102158696	102158696	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	12	102158696	102158696	C	G	SNP	GNPTAB	ENST00000299314	human	ensembl	74_37	-1	known	missense	c.1999	p.E667Q	1.000	NULL	pfam_DMAP1-bd,pfam_Notch_dom,pfam_DUF3184,superfamily_Notch_dom,smart_Notch_dom,pfscan_EF_hand_dom,pfscan_Notch_dom	-	no_errors	GNPTAB	HGNC	ENSG00000111670	tier1	-	-	32	0	0.00	27	13	32.50
GOT1L1	0	genome.wustl.edu	37	8	37791833	37791834	+	Frame_Shift_Ins	INS	-	-	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	8	37791833	37791834	0	T	INS	GOT1L1	ENST00000307599	human	ensembl	74_37	-1	known	frame_shift_ins	c.1244_1243	p.T415fs	0.000:0.000	NULL	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase,prints_Asp_trans	-	no_errors	GOT1L1	HGNC	ENSG00000169154				45	0	0.00	115	11	8.73
HEATR4	0	genome.wustl.edu	37	14	73962027	73962027	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	14	73962027	73962027	C	T	SNP	HEATR4	ENST00000334988	human	ensembl	74_37	-1	known	missense	c.2690	p.G897E	0.000	NULL	pfam_HEAT,superfamily_ARM-type_fold	-	no_errors	HEATR4	HGNC	ENSG00000187105	tier1	-	-	54	0	0.00	53	25	32.05
HEATR4	0	genome.wustl.edu	37	14	73962027	73962027	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	14	73962027	73962027	C	T	SNP	HEATR4	ENST00000334988	human	ensembl	74_37	-1	known	missense	c.2690	p.G897E	0.000	NULL	pfam_HEAT,superfamily_ARM-type_fold	-	no_errors	HEATR4	HGNC	ENSG00000187105	tier1	-	-	63	0	0.00	53	25	32.05
HM13	0	genome.wustl.edu	37	20	30142485	30142485	+	RNA	DEL	A	A	-			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	20	30142485	30142485	A	-	DEL	HM13	ENST00000474466	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.172	-	-	-	no_errors	HM13	HGNC	ENSG00000101294	tier1			17	0	0.00	32	6	15.79
HOOK2	0	genome.wustl.edu	37	19	12874386	12874386	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	19	12874386	12874386	G	A	SNP	HOOK2	ENST00000397668	human	ensembl	74_37	-1	known	missense	c.1966	p.R656W	1.000	pfam_Hook-related_fam	pfam_Hook-related_fam,superfamily_UBA-like	-	no_errors	HOOK2	HGNC	ENSG00000095066	tier1	-	-	48	0	0.00	40	19	32.20
HOOK2	0	genome.wustl.edu	37	19	12874386	12874386	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	19	12874386	12874386	G	A	SNP	HOOK2	ENST00000397668	human	ensembl	74_37	-1	known	missense	c.1966	p.R656W	1.000	pfam_Hook-related_fam	pfam_Hook-related_fam,superfamily_UBA-like	-	no_errors	HOOK2	HGNC	ENSG00000095066	tier1	-	-	57	0	0.00	40	19	32.20
HSPA2	0	genome.wustl.edu	37	14	65009115	65009115	+	Silent	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	14	65009115	65009115	C	T	SNP	HSPA2	ENST00000247207	human	ensembl	74_37	+1	known	silent	c.1548	p.D516	1.000	pfam_Hsp_70_fam	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPA2	HGNC	ENSG00000126803				21	0	0.00	43	3	6.52
HTR1E	0	genome.wustl.edu	37	6	87725546	87725546	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	6	87725546	87725546	G	A	SNP	HTR1E	ENST00000305344	human	ensembl	74_37	+1	known	missense	c.494	p.R165H	0.080	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_5HT_rcpt	-	no_errors	HTR1E	HGNC	ENSG00000168830	tier1	-	-	31	0	0.00	30	4	11.76
HTR1E	0	genome.wustl.edu	37	6	87725546	87725546	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	6	87725546	87725546	G	A	SNP	HTR1E	ENST00000305344	human	ensembl	74_37	+1	known	missense	c.494	p.R165H	0.080	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_5HT_rcpt	-	no_errors	HTR1E	HGNC	ENSG00000168830	tier1	-	-	34	0	0.00	30	4	11.76
HTR7	0	genome.wustl.edu	37	10	92503625	92503625	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	10	92503625	92503625	C	A	SNP	HTR7	ENST00000371721	human	ensembl	74_37	-1	known	missense	c.1376	p.C459F	0.001	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_5HT_7_rcpt,prints_GPCR_Rhodpsn,prints_Melcrt_ACTH_rcpt	-	no_errors	HTR7	HGNC	ENSG00000148680	tier1	-	-	22	0	0.00	16	28	63.64
HTR7	0	genome.wustl.edu	37	10	92503625	92503625	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	10	92503625	92503625	C	A	SNP	HTR7	ENST00000371721	human	ensembl	74_37	-1	known	missense	c.1376	p.C459F	0.001	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_5HT_7_rcpt,prints_GPCR_Rhodpsn,prints_Melcrt_ACTH_rcpt	-	no_errors	HTR7	HGNC	ENSG00000148680	tier1	-	-	34	0	0.00	16	28	63.64
IGSF10	0	genome.wustl.edu	37	3	151165454	151165454	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	3	151165454	151165454	C	T	SNP	IGSF10	ENST00000282466	human	ensembl	74_37	-1	known	missense	c.2315	p.R772Q	0.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	IGSF10	HGNC	ENSG00000152580	tier1	-	-	54	0	0.00	114	7	5.79
IGSF22	0	genome.wustl.edu	37	11	18741278	18741278	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	11	18741278	18741278	C	G	SNP	IGSF22	ENST00000513874	human	ensembl	74_37	-1	known	missense	c.681	p.K227N	1.000	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGSF22	HGNC	ENSG00000179057	tier1	-	-	56	0	0.00	49	40	44.94
IGSF22	0	genome.wustl.edu	37	11	18741278	18741278	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	11	18741278	18741278	C	G	SNP	IGSF22	ENST00000513874	human	ensembl	74_37	-1	known	missense	c.681	p.K227N	1.000	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGSF22	HGNC	ENSG00000179057	tier1	-	-	79	0	0.00	49	40	44.94
IL22RA1	0	genome.wustl.edu	37	1	24447957	24447957	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	1	24447957	24447957	C	T	SNP	IL22RA1	ENST00000270800	human	ensembl	74_37	-1	novel	missense	c.1063	p.A355T	0.000	NULL	pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IL22RA1	HGNC	ENSG00000142677	tier1	-	-	81	0	0.00	72	9	11.11
IL22RA1	0	genome.wustl.edu	37	1	24447957	24447957	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	1	24447957	24447957	C	T	SNP	IL22RA1	ENST00000270800	human	ensembl	74_37	-1	novel	missense	c.1063	p.A355T	0.000	NULL	pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IL22RA1	HGNC	ENSG00000142677	tier1	-	-	83	0	0.00	72	9	11.11
IQCE	0	genome.wustl.edu	37	7	2638117	2638117	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	7	2638117	2638117	C	T	SNP	IQCE	ENST00000402050	human	ensembl	74_37	+1	known	missense	c.1459	p.P487S	0.000	NULL	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	-	no_errors	IQCE	HGNC	ENSG00000106012	tier1	-	-	61	0	0.00	59	38	39.18
IQCE	0	genome.wustl.edu	37	7	2638117	2638117	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	7	2638117	2638117	C	T	SNP	IQCE	ENST00000402050	human	ensembl	74_37	+1	known	missense	c.1459	p.P487S	0.000	NULL	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	-	no_errors	IQCE	HGNC	ENSG00000106012	tier1	-	-	76	0	0.00	59	38	39.18
ITPR2	0	genome.wustl.edu	37	12	26774191	26774191	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	12	26774191	26774191	G	T	SNP	ITPR2	ENST00000381340	human	ensembl	74_37	-1	known	nonsense	c.3327	p.Y1109*	1.000	superfamily_ARM-type_fold	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ARM-type_fold,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR2	HGNC	ENSG00000123104	tier1	-	-	38	0	0.00	59	4	6.35
ITPR2	0	genome.wustl.edu	37	12	26774191	26774191	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	12	26774191	26774191	G	T	SNP	ITPR2	ENST00000381340	human	ensembl	74_37	-1	known	nonsense	c.3327	p.Y1109*	1.000	superfamily_ARM-type_fold	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ARM-type_fold,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR2	HGNC	ENSG00000123104	tier1	-	-	66	0	0.00	59	4	6.35
JMY	0	genome.wustl.edu	37	5	78610246	78610246	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	5	78610246	78610246	G	A	SNP	JMY	ENST00000396137	human	ensembl	74_37	+1	known	missense	c.2231	p.R744H	0.000	NULL	pfscan_WH2_dom	-	no_errors	JMY	HGNC	ENSG00000152409				37	0	0.00	34	2	5.56
KCNT2	0	genome.wustl.edu	37	1	196459055	196459055	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	1	196459055	196459055	C	T	SNP	KCNT2	ENST00000294725	human	ensembl	74_37	-1	known	missense	c.188	p.R63H	1.000	NULL	pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom	-	no_errors	KCNT2	HGNC	ENSG00000162687	tier1	-	-	18	0	0.00	8	6	42.86
KCNT2	0	genome.wustl.edu	37	1	196459055	196459055	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	1	196459055	196459055	C	T	SNP	KCNT2	ENST00000294725	human	ensembl	74_37	-1	known	missense	c.188	p.R63H	1.000	NULL	pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom	-	no_errors	KCNT2	HGNC	ENSG00000162687	tier1	-	-	22	0	0.00	8	6	42.86
KDM4C	0	genome.wustl.edu	37	9	6793029	6793029	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	9	6793029	6793029	G	T	SNP	KDM4C	ENST00000381309	human	ensembl	74_37	+1	known	missense	c.41	p.C14F	1.000	NULL	pfam_JmjC_dom,pfam_TF_JmjN,superfamily_Znf_FYVE_PHD,superfamily_Chorismate_mutase_type_II,smart_TF_JmjN,smart_JmjC_dom,smart_Znf_PHD,smart_Tudor,pfscan_TF_JmjN,pfscan_JmjC_dom	-	no_errors	KDM4C	HGNC	ENSG00000107077	tier1	-	-	32	0	0.00	51	4	7.27
KDM4C	0	genome.wustl.edu	37	9	6793029	6793029	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	9	6793029	6793029	G	T	SNP	KDM4C	ENST00000381309	human	ensembl	74_37	+1	known	missense	c.41	p.C14F	1.000	NULL	pfam_JmjC_dom,pfam_TF_JmjN,superfamily_Znf_FYVE_PHD,superfamily_Chorismate_mutase_type_II,smart_TF_JmjN,smart_JmjC_dom,smart_Znf_PHD,smart_Tudor,pfscan_TF_JmjN,pfscan_JmjC_dom	-	no_errors	KDM4C	HGNC	ENSG00000107077	tier1	-	-	45	0	0.00	51	4	7.27
KHNYN	0	genome.wustl.edu	37	14	24900129	24900130	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	14	24900129	24900130	AG	-	DEL	KHNYN	ENST00000251343	human	ensembl	74_37	+1	known	frame_shift_del	c.193_194	p.R65fs	1.000:1.000	NULL	pfam_RNase_Zc3h12	-	no_errors	KHNYN	HGNC	ENSG00000100441	tier1			41	0	0.00	26	17	39.53
KHNYN	0	genome.wustl.edu	37	14	24900129	24900130	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	14	24900129	24900130	AG	-	DEL	KHNYN	ENST00000251343	human	ensembl	74_37	+1	known	frame_shift_del	c.193_194	p.R65fs	1.000:1.000	NULL	pfam_RNase_Zc3h12	-	no_errors	KHNYN	HGNC	ENSG00000100441	tier1			53	0	0.00	26	17	39.53
KIAA1211L	0	genome.wustl.edu	37	2	99449396	99449396	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	2	99449396	99449396	C	T	SNP	KIAA1211L	ENST00000397899	human	ensembl	74_37	-1	known	missense	c.304	p.G102R	0.702	NULL	NULL	-	no_errors	KIAA1211L	HGNC	ENSG00000196872	tier1	-	-	22	0	0.00	15	7	31.82
KIAA1211L	0	genome.wustl.edu	37	2	99449396	99449396	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	2	99449396	99449396	C	T	SNP	KIAA1211L	ENST00000397899	human	ensembl	74_37	-1	known	missense	c.304	p.G102R	0.702	NULL	NULL	-	no_errors	KIAA1211L	HGNC	ENSG00000196872	tier1	-	-	24	0	0.00	15	7	31.82
KLF7	0	genome.wustl.edu	37	2	207945782	207945783	+	RNA	DEL	TA	TA	-			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	TA	TA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	2	207945782	207945783	TA	-	DEL	KLF7	ENST00000467833	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.958:0.994	-	-	-	no_errors	KLF7	HGNC	ENSG00000118263	tier1			45	0	0.00	26	4	13.33
KLHL26	0	genome.wustl.edu	37	19	18779978	18779978	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	19	18779978	18779978	G	A	SNP	KLHL26	ENST00000300976	human	ensembl	74_37	+1	known	missense	c.1771	p.D591N	1.000	smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL26	HGNC	ENSG00000167487	tier1	-	-	45	0	0.00	78	14	15.22
KLHL26	0	genome.wustl.edu	37	19	18779978	18779978	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	19	18779978	18779978	G	A	SNP	KLHL26	ENST00000300976	human	ensembl	74_37	+1	known	missense	c.1771	p.D591N	1.000	smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL26	HGNC	ENSG00000167487	tier1	-	-	63	0	0.00	78	14	15.22
LILRB3	0	genome.wustl.edu	37	19	54721222	54721222	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	19	54721222	54721222	C	G	SNP	LILRB3	ENST00000407860	human	ensembl	74_37	-1	known	missense	c.1766	p.R589T	0.000	NULL	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LILRB3	HGNC	ENSG00000204577	tier1	-	-	101	0	0.00	101	22	17.89
LILRB3	0	genome.wustl.edu	37	19	54721222	54721222	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	19	54721222	54721222	C	G	SNP	LILRB3	ENST00000407860	human	ensembl	74_37	-1	known	missense	c.1766	p.R589T	0.000	NULL	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LILRB3	HGNC	ENSG00000204577	tier1	-	-	80	0	0.00	101	22	17.89
LOC100506060	0	genome.wustl.edu	37	16	70269011	70269011	+	RNA	SNP	A	A	C			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	16	70269011	70269011	A	C	SNP	LOC100506060	ENST00000568855	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-296I10.6	Clone_based_vega_gene	ENSG00000261556	tier1	-	-	140	0	0.00	158	48	23.30
LOC100506060	0	genome.wustl.edu	37	16	70269011	70269011	+	RNA	SNP	A	A	C			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	16	70269011	70269011	A	C	SNP	LOC100506060	ENST00000568855	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-296I10.6	Clone_based_vega_gene	ENSG00000261556	tier1	-	-	148	0	0.00	158	48	23.30
LOC400891	0	genome.wustl.edu	37	22	21403732	21403732	+	RNA	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	22	21403732	21403732	C	T	SNP	LOC400891	ENST00000473769	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	AC002472.13	Clone_based_vega_gene	ENSG00000187905	tier1	rs116878923	-	39	0	0.00	50	10	16.67
LOC440518	0	genome.wustl.edu	37	19	22785662	22785662	+	RNA	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	19	22785662	22785662	C	T	SNP	LOC440518	ENST00000600260	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	CTC-457E21.3	Clone_based_vega_gene	ENSG00000269332	tier1	-	-	73	0	0.00	97	6	5.83
LOC440518	0	genome.wustl.edu	37	19	22785662	22785662	+	RNA	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	19	22785662	22785662	C	T	SNP	LOC440518	ENST00000600260	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	CTC-457E21.3	Clone_based_vega_gene	ENSG00000269332	tier1	-	-	81	0	0.00	97	6	5.83
LRRC37A3	0	genome.wustl.edu	37	17	62855003	62855004	+	Splice_Site	INS	-	-	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	17	62855003	62855004	-	A	INS	LRRC37A3	ENST00000319651	human	ensembl	74_37	-1	known	splice_site_ins	c.4705-3_4705-2	e10-2	0.379:0.384	-	-	-	no_errors	LRRC37A3	HGNC	ENSG00000176809	tier1			40	0	0.00	39	5	11.36
LRRC61	0	genome.wustl.edu	37	7	150034279	150034279	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	7	150034279	150034279	C	A	SNP	LRRC61	ENST00000323078	human	ensembl	74_37	+1	known	missense	c.329	p.A110D	0.589	NULL	pfam_Leu-rich_rpt	-	no_errors	LRRC61	HGNC	ENSG00000127399	tier1	-	-	43	0	0.00	37	17	31.48
LRRC61	0	genome.wustl.edu	37	7	150034279	150034279	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	7	150034279	150034279	C	A	SNP	LRRC61	ENST00000323078	human	ensembl	74_37	+1	known	missense	c.329	p.A110D	0.589	NULL	pfam_Leu-rich_rpt	-	no_errors	LRRC61	HGNC	ENSG00000127399	tier1	-	-	70	0	0.00	37	17	31.48
MAGEB6	0	genome.wustl.edu	37	X	26213165	26213165	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	X	26213165	26213165	G	C	SNP	MAGEB6	ENST00000379034	human	ensembl	74_37	+1	known	missense	c.1202	p.R401T	0.000	NULL	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEB6	HGNC	ENSG00000176746	tier1	-	-	71	0	0.00	42	39	47.56
MAGEB6	0	genome.wustl.edu	37	X	26213165	26213165	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	X	26213165	26213165	G	C	SNP	MAGEB6	ENST00000379034	human	ensembl	74_37	+1	known	missense	c.1202	p.R401T	0.000	NULL	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEB6	HGNC	ENSG00000176746	tier1	-	-	86	0	0.00	42	39	47.56
MAGEL2	0	genome.wustl.edu	37	15	23889169	23889169	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	15	23889169	23889169	C	T	SNP	MAGEL2	ENST00000532292	human	ensembl	74_37	-1	known	missense	c.1912	p.G638S	0.027	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEL2	HGNC	ENSG00000254585	tier1	-	-	13	0	0.00	21	8	27.59
MAGEL2	0	genome.wustl.edu	37	15	23889169	23889169	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	15	23889169	23889169	C	T	SNP	MAGEL2	ENST00000532292	human	ensembl	74_37	-1	known	missense	c.1912	p.G638S	0.027	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEL2	HGNC	ENSG00000254585	tier1	-	-	23	0	0.00	21	8	27.59
MAP3K1	0	genome.wustl.edu	37	5	56189381	56189381	+	Silent	SNP	A	A	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	5	56189381	56189381	A	G	SNP	MAP3K1	ENST00000399503	human	ensembl	74_37	+1	novel	silent	c.4413	p.P1471	0.804	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_RING,pfscan_Znf_SWIM,pfscan_Prot_kinase_dom	-	no_errors	MAP3K1	HGNC	ENSG00000095015	tier1	-	-	27	0	0.00	8	16	66.67
MAP3K1	0	genome.wustl.edu	37	5	56189381	56189381	+	Silent	SNP	A	A	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	5	56189381	56189381	A	G	SNP	MAP3K1	ENST00000399503	human	ensembl	74_37	+1	novel	silent	c.4413	p.P1471	0.804	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_RING,pfscan_Znf_SWIM,pfscan_Prot_kinase_dom	-	no_errors	MAP3K1	HGNC	ENSG00000095015	tier1	-	-	38	0	0.00	8	16	66.67
MC5R	0	genome.wustl.edu	37	18	13826394	13826394	+	Silent	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	18	13826394	13826394	C	T	SNP	MC5R	ENST00000324750	human	ensembl	74_37	+1	known	silent	c.630	p.L210	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Melancort_rcpt_5,prints_Melcrt_ACTH_rcpt,prints_GPCR_Rhodpsn,prints_Melancort_rcpt	-	no_errors	MC5R	HGNC	ENSG00000176136	tier1	-	-	45	0	0.00	68	16	19.05
MC5R	0	genome.wustl.edu	37	18	13826394	13826394	+	Silent	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	18	13826394	13826394	C	T	SNP	MC5R	ENST00000324750	human	ensembl	74_37	+1	known	silent	c.630	p.L210	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Melancort_rcpt_5,prints_Melcrt_ACTH_rcpt,prints_GPCR_Rhodpsn,prints_Melancort_rcpt	-	no_errors	MC5R	HGNC	ENSG00000176136	tier1	-	-	68	0	0.00	68	16	19.05
MFN2	0	genome.wustl.edu	37	1	12066704	12066704	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	1	12066704	12066704	C	G	SNP	MFN2	ENST00000235329	human	ensembl	74_37	+1	known	missense	c.1826	p.S609C	1.000	pfam_Fzo/mitofusin_HR2	pfam_Fzo/mitofusin_HR2,pfam_Dynamin_GTPase,superfamily_P-loop_NTPase	-	no_errors	MFN2	HGNC	ENSG00000116688	tier1	-	-	50	0	0.00	50	23	31.51
MFN2	0	genome.wustl.edu	37	1	12066704	12066704	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	1	12066704	12066704	C	G	SNP	MFN2	ENST00000235329	human	ensembl	74_37	+1	known	missense	c.1826	p.S609C	1.000	pfam_Fzo/mitofusin_HR2	pfam_Fzo/mitofusin_HR2,pfam_Dynamin_GTPase,superfamily_P-loop_NTPase	-	no_errors	MFN2	HGNC	ENSG00000116688	tier1	-	-	72	0	0.00	50	23	31.51
MIR1302-5	0	genome.wustl.edu	37	20	49231294	49231294	+	RNA	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	20	49231294	49231294	G	A	SNP	MIR1302-5	ENST00000408164	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	MIR1302-5	HGNC	ENSG00000221091	tier1	-	-	45	0	0.00	95	12	11.21
MIR1302-5	0	genome.wustl.edu	37	20	49231294	49231294	+	RNA	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	20	49231294	49231294	G	A	SNP	MIR1302-5	ENST00000408164	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	MIR1302-5	HGNC	ENSG00000221091	tier1	-	-	46	0	0.00	95	12	11.21
MIR4300	0	genome.wustl.edu	37	11	81601792	81601792	+	RNA	SNP	A	A	C			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	11	81601792	81601792	A	C	SNP	MIR4300	ENST00000581016	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	MIR4300	HGNC	ENSG00000264110	tier1	-	-	52	0	0.00	78	15	16.13
MIR4300	0	genome.wustl.edu	37	11	81601792	81601792	+	RNA	SNP	A	A	C			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	11	81601792	81601792	A	C	SNP	MIR4300	ENST00000581016	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	MIR4300	HGNC	ENSG00000264110	tier1	-	-	53	0	0.00	78	15	16.13
MMP13	0	genome.wustl.edu	37	11	102826188	102826188	+	Missense_Mutation	SNP	A	A	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	11	102826188	102826188	A	T	SNP	MMP13	ENST00000340273	human	ensembl	74_37	-1	novel	missense	c.155	p.L52H	0.980	pfam_Peptidoglycan-bd-like,superfamily_Peptidoglycan-bd-like,pirsf_Pept_M10A_Metazoans	pfam_Pept_M10_metallopeptidase,pfam_Hemopexin-like_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,pirsf_Pept_M10A_Metazoans,prints_Pept_M10A	-	no_errors	MMP13	HGNC	ENSG00000137745				39	0	0.00	48	3	5.88
MRPS15	0	genome.wustl.edu	37	1	36923529	36923529	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	1	36923529	36923529	G	A	SNP	MRPS15	ENST00000373116	human	ensembl	74_37	-1	known	nonsense	c.439	p.R147*	0.996	pfam_Ribosomal_S15,superfamily_S15_NS1_RNA-bd	pfam_Ribosomal_S15,superfamily_S15_NS1_RNA-bd	-	no_errors	MRPS15	HGNC	ENSG00000116898	tier1	-	-	48	0	0.00	60	21	25.93
MRPS15	0	genome.wustl.edu	37	1	36923529	36923529	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	1	36923529	36923529	G	A	SNP	MRPS15	ENST00000373116	human	ensembl	74_37	-1	known	nonsense	c.439	p.R147*	0.996	pfam_Ribosomal_S15,superfamily_S15_NS1_RNA-bd	pfam_Ribosomal_S15,superfamily_S15_NS1_RNA-bd	-	no_errors	MRPS15	HGNC	ENSG00000116898	tier1	-	-	68	0	0.00	60	21	25.93
MRVI1	0	genome.wustl.edu	37	11	10650303	10650303	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	11	10650303	10650303	G	A	SNP	MRVI1	ENST00000421747	human	ensembl	74_37	-1	known	missense	c.620	p.P207L	0.016	NULL	pfam_MRVI1	-	no_errors	MRVI1	HGNC	ENSG00000072952	tier1	-	-	30	0	0.00	36	10	21.28
MRVI1	0	genome.wustl.edu	37	11	10650303	10650303	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	11	10650303	10650303	G	A	SNP	MRVI1	ENST00000421747	human	ensembl	74_37	-1	known	missense	c.620	p.P207L	0.016	NULL	pfam_MRVI1	-	no_errors	MRVI1	HGNC	ENSG00000072952	tier1	-	-	34	0	0.00	36	10	21.28
MT-ATP6	0	genome.wustl.edu	37	MT	9010	9010	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	MT	9010	9010	G	T	SNP	MT-ATP6	ENST00000361899	human	ensembl	74_37	+1	known	missense	c.484	p.A162S	NULL	pfam_ATPase_F0-cplx_asu,superfamily_ATPase_F0-cplx_asu,prints_ATPase_F0-cplx_asu,tigrfam_ATPase_F0-cplx_asu	pfam_ATPase_F0-cplx_asu,superfamily_ATPase_F0-cplx_asu,prints_ATPase_F0-cplx_asu,tigrfam_ATPase_F0-cplx_asu	-	no_errors	MT-ATP6	HGNC	ENSG00000198899	tier1	-	-	35	0	0.00	11	2	15.38
MT-ATP6	0	genome.wustl.edu	37	MT	9010	9010	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	MT	9010	9010	G	T	SNP	MT-ATP6	ENST00000361899	human	ensembl	74_37	+1	known	missense	c.484	p.A162S	NULL	pfam_ATPase_F0-cplx_asu,superfamily_ATPase_F0-cplx_asu,prints_ATPase_F0-cplx_asu,tigrfam_ATPase_F0-cplx_asu	pfam_ATPase_F0-cplx_asu,superfamily_ATPase_F0-cplx_asu,prints_ATPase_F0-cplx_asu,tigrfam_ATPase_F0-cplx_asu	-	no_errors	MT-ATP6	HGNC	ENSG00000198899	tier1	-	-	69	0	0.00	11	2	15.38
MT-ATP6	0	genome.wustl.edu	37	MT	9098	9098	+	Missense_Mutation	SNP	T	T	C			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	MT	9098	9098	T	C	SNP	MT-ATP6	ENST00000361899	human	ensembl	74_37	+1	known	missense	c.572	p.I191T	NULL	pfam_ATPase_F0-cplx_asu,superfamily_ATPase_F0-cplx_asu,tigrfam_ATPase_F0-cplx_asu	pfam_ATPase_F0-cplx_asu,superfamily_ATPase_F0-cplx_asu,prints_ATPase_F0-cplx_asu,tigrfam_ATPase_F0-cplx_asu	-	no_errors	MT-ATP6	HGNC	ENSG00000198899	tier1	rs201559119	-	62	0	0.00	0	15	100.00
MT-ND5	0	genome.wustl.edu	37	MT	13413	13413	+	Missense_Mutation	SNP	A	A	C			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	MT	13413	13413	A	C	SNP	MT-ND5	ENST00000361567	human	ensembl	74_37	+1	known	missense	c.1077	p.M359I	NULL	pfam_NADH_UbQ/plastoQ_OxRdtase,tigrfam_NADHpl_OxRdtase_5	pfam_NADH_UbQ/plastoQ_OxRdtase,pfam_NADH_DH_su5_C,pfam_NADH_UbQ_OxRdtase_chain5/L_N,tigrfam_NADHpl_OxRdtase_5	-	no_errors	MT-ND5	HGNC	ENSG00000198786	tier1	-	-	61	0	0.00	11	2	15.38
MYH14	0	genome.wustl.edu	37	19	50713840	50713840	+	Frame_Shift_Del	DEL	A	A	-			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	19	50713840	50713840	A	-	DEL	MYH14	ENST00000262269	human	ensembl	74_37	+1	known	frame_shift_del	c.218	p.G74fs	1.000	pfam_Myosin_N,superfamily_P-loop_NTPase	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH14	HGNC	ENSG00000105357	tier1			17	0	0.00	10	2	16.67
MYT1L	0	genome.wustl.edu	37	2	1926292	1926292	+	Missense_Mutation	SNP	A	A	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	2	1926292	1926292	A	G	SNP	MYT1L	ENST00000399161	human	ensembl	74_37	-1	known	missense	c.1249	p.S417P	1.000	NULL	pfam_Myelin_TF,pfam_Znf_C2HC	-	no_errors	MYT1L	HGNC	ENSG00000186487	tier1	-	-	49	0	0.00	48	12	20.00
MYT1L	0	genome.wustl.edu	37	2	1926292	1926292	+	Missense_Mutation	SNP	A	A	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	2	1926292	1926292	A	G	SNP	MYT1L	ENST00000399161	human	ensembl	74_37	-1	known	missense	c.1249	p.S417P	1.000	NULL	pfam_Myelin_TF,pfam_Znf_C2HC	-	no_errors	MYT1L	HGNC	ENSG00000186487	tier1	-	-	63	0	0.00	48	12	20.00
MZF1	0	genome.wustl.edu	37	19	59074805	59074805	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	19	59074805	59074805	G	T	SNP	MZF1	ENST00000215057	human	ensembl	74_37	-1	known	missense	c.839	p.P280H	0.764	NULL	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	MZF1	HGNC	ENSG00000099326	tier1	-	-	52	0	0.00	47	4	7.84
NAALAD2	0	genome.wustl.edu	37	11	89882244	89882244	+	Missense_Mutation	SNP	A	A	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	11	89882244	89882244	A	T	SNP	NAALAD2	ENST00000534061	human	ensembl	74_37	+1	known	missense	c.452	p.Y151F	1.000	NULL	pfam_TFR-like_dimer_dom,pfam_Peptidase_M28,pfam_Protease-assoc_domain,superfamily_TFR-like_dimer_dom	-	no_errors	NAALAD2	HGNC	ENSG00000077616	tier1	-	-	106	0	0.00	109	58	34.73
NAALAD2	0	genome.wustl.edu	37	11	89882244	89882244	+	Missense_Mutation	SNP	A	A	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	11	89882244	89882244	A	T	SNP	NAALAD2	ENST00000534061	human	ensembl	74_37	+1	known	missense	c.452	p.Y151F	1.000	NULL	pfam_TFR-like_dimer_dom,pfam_Peptidase_M28,pfam_Protease-assoc_domain,superfamily_TFR-like_dimer_dom	-	no_errors	NAALAD2	HGNC	ENSG00000077616	tier1	-	-	109	0	0.00	109	58	34.73
NALCN	0	genome.wustl.edu	37	13	101890252	101890252	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	13	101890252	101890252	C	A	SNP	NALCN	ENST00000251127	human	ensembl	74_37	-1	known	missense	c.1288	p.D430Y	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom	-	no_errors	NALCN	HGNC	ENSG00000102452				27	0	0.00	33	2	5.71
NCOR2	0	genome.wustl.edu	37	12	124904564	124904564	+	Frame_Shift_Del	DEL	T	T	-			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	12	124904564	124904564	T	-	DEL	NCOR2	ENST00000356219	human	ensembl	74_37	-1	known	frame_shift_del	c.1421	p.K474fs	1.000	superfamily_Homeodomain-like,smart_SANT/Myb	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	NCOR2	HGNC	ENSG00000196498	tier1			33	0	0.00	35	2	5.41
NCOR2	0	genome.wustl.edu	37	12	124904564	124904564	+	Frame_Shift_Del	DEL	T	T	-			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	12	124904564	124904564	T	-	DEL	NCOR2	ENST00000356219	human	ensembl	74_37	-1	known	frame_shift_del	c.1421	p.K474fs	1.000	superfamily_Homeodomain-like,smart_SANT/Myb	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	NCOR2	HGNC	ENSG00000196498	tier1			34	0	0.00	35	2	5.41
NEBL	0	genome.wustl.edu	37	10	21108359	21108359	+	Silent	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	10	21108359	21108359	C	T	SNP	NEBL	ENST00000377122	human	ensembl	74_37	-1	known	silent	c.2049	p.L683	1.000	pfam_Nebulin_35r-motif,smart_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	NEBL	HGNC	ENSG00000078114	tier1	-	-	37	0	0.00	26	12	31.58
NEBL	0	genome.wustl.edu	37	10	21108359	21108359	+	Silent	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	10	21108359	21108359	C	T	SNP	NEBL	ENST00000377122	human	ensembl	74_37	-1	known	silent	c.2049	p.L683	1.000	pfam_Nebulin_35r-motif,smart_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	NEBL	HGNC	ENSG00000078114	tier1	-	-	55	0	0.00	26	12	31.58
NIN	0	genome.wustl.edu	37	14	51238069	51238069	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	14	51238069	51238069	C	A	SNP	NIN	ENST00000245441	human	ensembl	74_37	-1	known	missense	c.1099	p.A367S	1.000	NULL	superfamily_tRNA-bd_arm,pfscan_EF_hand_dom	-	no_errors	NIN	HGNC	ENSG00000100503	tier1	-	-	36	0	0.00	37	4	9.76
NIN	0	genome.wustl.edu	37	14	51238069	51238069	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	14	51238069	51238069	C	A	SNP	NIN	ENST00000245441	human	ensembl	74_37	-1	known	missense	c.1099	p.A367S	1.000	NULL	superfamily_tRNA-bd_arm,pfscan_EF_hand_dom	-	no_errors	NIN	HGNC	ENSG00000100503	tier1	-	-	38	0	0.00	37	4	9.76
NINL	0	genome.wustl.edu	37	20	25434171	25434171	+	Silent	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	20	25434171	25434171	C	T	SNP	NINL	ENST00000278886	human	ensembl	74_37	-1	known	silent	c.4065	p.E1355	0.998	NULL	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	NINL	HGNC	ENSG00000101004	tier1	-	-	36	0	0.00	75	21	21.88
NINL	0	genome.wustl.edu	37	20	25434213	25434213	+	Silent	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	20	25434213	25434213	C	T	SNP	NINL	ENST00000278886	human	ensembl	74_37	-1	known	silent	c.4023	p.V1341	1.000	NULL	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	NINL	HGNC	ENSG00000101004	tier1	-	-	36	0	0.00	72	17	19.10
NINL	0	genome.wustl.edu	37	20	25434213	25434213	+	Silent	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	20	25434213	25434213	C	T	SNP	NINL	ENST00000278886	human	ensembl	74_37	-1	known	silent	c.4023	p.V1341	1.000	NULL	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	NINL	HGNC	ENSG00000101004	tier1	-	-	37	0	0.00	72	17	19.10
NOBOX	0	genome.wustl.edu	37	7	144096926	144096926	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	7	144096926	144096926	G	A	SNP	NOBOX	ENST00000467773	human	ensembl	74_37	-1	known	nonsense	c.1078	p.R360*	0.978	superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	NOBOX	HGNC	ENSG00000106410	tier1	-	-	48	0	0.00	36	21	36.84
NOBOX	0	genome.wustl.edu	37	7	144096926	144096926	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	7	144096926	144096926	G	A	SNP	NOBOX	ENST00000467773	human	ensembl	74_37	-1	known	nonsense	c.1078	p.R360*	0.978	superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	NOBOX	HGNC	ENSG00000106410	tier1	-	-	53	0	0.00	36	21	36.84
NRSN1	0	genome.wustl.edu	37	6	24145969	24145969	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	6	24145969	24145969	C	T	SNP	NRSN1	ENST00000378491	human	ensembl	74_37	+1	known	missense	c.383	p.T128M	0.819	NULL	NULL	-	no_errors	NRSN1	HGNC	ENSG00000152954	tier1	-	-	48	0	0.00	54	4	6.90
NRSN1	0	genome.wustl.edu	37	6	24145969	24145969	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	6	24145969	24145969	C	T	SNP	NRSN1	ENST00000378491	human	ensembl	74_37	+1	known	missense	c.383	p.T128M	0.819	NULL	NULL	-	no_errors	NRSN1	HGNC	ENSG00000152954	tier1	-	-	52	0	0.00	54	4	6.90
NUMBL	0	genome.wustl.edu	37	19	41173866	41173868	+	In_Frame_Del	DEL	TGC	TGC	-			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	TGC	TGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	19	41173866	41173868	TGC	-	DEL	NUMBL	ENST00000252891	human	ensembl	74_37	-1	known	in_frame_del	c.1337_1335	p.Q446in_frame_del	0.321:0.944:0.964	pirsf_Numb/numb-like	pfam_Numb_domain,pfam_PTB/PI_dom,pfam_PTB,smart_PTB/PI_dom,pirsf_Numb/numb-like,pfscan_PTB/PI_dom	-	no_errors	NUMBL	HGNC	ENSG00000105245	tier1			18	0	0.00	18	8	30.77
NUMBL	0	genome.wustl.edu	37	19	41173889	41173889	+	Silent	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	19	41173889	41173889	C	T	SNP	NUMBL	ENST00000252891	human	ensembl	74_37	-1	known	silent	c.1314	p.Q438	1.000	pirsf_Numb/numb-like	pfam_Numb_domain,pfam_PTB/PI_dom,pfam_PTB,smart_PTB/PI_dom,pirsf_Numb/numb-like,pfscan_PTB/PI_dom	-	no_errors	NUMBL	HGNC	ENSG00000105245	tier1	-	-	18	0	0.00	24	9	27.27
NUMBL	0	genome.wustl.edu	37	19	41173896	41173898	+	In_Frame_Del	DEL	TGT	TGT	-			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	TGT	TGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	19	41173896	41173898	TGT	-	DEL	NUMBL	ENST00000252891	human	ensembl	74_37	-1	known	in_frame_del	c.1307_1305	p.Q439in_frame_del	1.000:1.000:0.998	pirsf_Numb/numb-like	pfam_Numb_domain,pfam_PTB/PI_dom,pfam_PTB,smart_PTB/PI_dom,pirsf_Numb/numb-like,pfscan_PTB/PI_dom	-	no_errors	NUMBL	HGNC	ENSG00000105245	tier1			19	0	0.00	26	9	25.71
OBSCN	0	genome.wustl.edu	37	1	228511299	228511299	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	1	228511299	228511299	G	A	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	missense	c.15644	p.R5215H	0.998	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358	tier1	-	-	63	0	0.00	47	20	29.85
OBSCN	0	genome.wustl.edu	37	1	228511299	228511299	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	1	228511299	228511299	G	A	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	missense	c.15644	p.R5215H	0.998	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358	tier1	-	-	69	0	0.00	47	20	29.85
ODF2	0	genome.wustl.edu	37	9	131250255	131250255	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	9	131250255	131250255	G	A	SNP	ODF2	ENST00000434106	human	ensembl	74_37	+1	known	missense	c.1487	p.R496H	0.955	NULL	NULL	-	no_errors	ODF2	HGNC	ENSG00000136811	tier1	-	-	50	0	0.00	62	6	8.82
OMP	0	genome.wustl.edu	37	11	76814312	76814312	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	11	76814312	76814312	G	A	SNP	OMP	ENST00000529803	human	ensembl	74_37	+1	known	missense	c.427	p.V143I	0.997	pfam_Olfactory_marker,superfamily_Olfactory_marker	pfam_Olfactory_marker,superfamily_Olfactory_marker	-	no_errors	OMP	HGNC	ENSG00000254550	tier1	-	-	30	0	0.00	59	9	13.24
OMP	0	genome.wustl.edu	37	11	76814312	76814312	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	11	76814312	76814312	G	A	SNP	OMP	ENST00000529803	human	ensembl	74_37	+1	known	missense	c.427	p.V143I	0.997	pfam_Olfactory_marker,superfamily_Olfactory_marker	pfam_Olfactory_marker,superfamily_Olfactory_marker	-	no_errors	OMP	HGNC	ENSG00000254550	tier1	-	-	52	0	0.00	59	9	13.24
OR4D5	0	genome.wustl.edu	37	11	123810418	123810418	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	11	123810418	123810418	C	G	SNP	OR4D5	ENST00000307033	human	ensembl	74_37	+1	known	missense	c.95	p.S32C	0.283	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4D5	HGNC	ENSG00000171014	tier1	-	-	62	0	0.00	89	12	11.88
OR4D5	0	genome.wustl.edu	37	11	123810418	123810418	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	11	123810418	123810418	C	G	SNP	OR4D5	ENST00000307033	human	ensembl	74_37	+1	known	missense	c.95	p.S32C	0.283	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4D5	HGNC	ENSG00000171014	tier1	-	-	67	0	0.00	89	12	11.88
OR4N4	0	genome.wustl.edu	37	15	22382852	22382852	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	15	22382852	22382852	G	T	SNP	OR4N4	ENST00000328795	human	ensembl	74_37	+1	known	missense	c.380	p.C127F	0.997	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4N4	HGNC	ENSG00000183706	tier1	-	-	123	0	0.00	123	10	7.52
OR4N4	0	genome.wustl.edu	37	15	22382852	22382852	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	15	22382852	22382852	G	T	SNP	OR4N4	ENST00000328795	human	ensembl	74_37	+1	known	missense	c.380	p.C127F	0.997	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4N4	HGNC	ENSG00000183706	tier1	-	-	87	0	0.00	123	10	7.52
OR5L2	0	genome.wustl.edu	37	11	55595411	55595411	+	Silent	SNP	C	C	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	11	55595411	55595411	C	A	SNP	OR5L2	ENST00000378397	human	ensembl	74_37	+1	known	silent	c.717	p.S239	0.990	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5L2	HGNC	ENSG00000205030	tier1	-	-	65	0	0.00	81	17	17.35
OR5L2	0	genome.wustl.edu	37	11	55595411	55595411	+	Silent	SNP	C	C	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	11	55595411	55595411	C	A	SNP	OR5L2	ENST00000378397	human	ensembl	74_37	+1	known	silent	c.717	p.S239	0.990	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5L2	HGNC	ENSG00000205030	tier1	-	-	69	0	0.00	81	17	17.35
OR5R1	0	genome.wustl.edu	37	11	56185376	56185376	+	Silent	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	11	56185376	56185376	C	T	SNP	OR5R1	ENST00000312253	human	ensembl	74_37	-1	known	silent	c.333	p.E111	0.304	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5R1	HGNC	ENSG00000174942	tier1	-	-	27	0	0.00	20	23	53.49
OR5R1	0	genome.wustl.edu	37	11	56185376	56185376	+	Silent	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	11	56185376	56185376	C	T	SNP	OR5R1	ENST00000312253	human	ensembl	74_37	-1	known	silent	c.333	p.E111	0.304	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5R1	HGNC	ENSG00000174942	tier1	-	-	28	0	0.00	20	23	53.49
OR8J3	0	genome.wustl.edu	37	11	55904509	55904509	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	11	55904509	55904509	C	T	SNP	OR8J3	ENST00000301529	human	ensembl	74_37	-1	known	missense	c.686	p.R229H	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8J3	HGNC	ENSG00000167822	tier1	-	-	33	0	0.00	20	16	44.44
OR8J3	0	genome.wustl.edu	37	11	55904509	55904509	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	11	55904509	55904509	C	T	SNP	OR8J3	ENST00000301529	human	ensembl	74_37	-1	known	missense	c.686	p.R229H	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8J3	HGNC	ENSG00000167822	tier1	-	-	34	0	0.00	20	16	44.44
OTUD4	0	genome.wustl.edu	37	4	146059597	146059597	+	Missense_Mutation	SNP	T	T	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	4	146059597	146059597	T	A	SNP	OTUD4	ENST00000447906	human	ensembl	74_37	-1	known	missense	c.2330	p.N777I	1.000	NULL	pfam_OTU,pfscan_OTU	-	no_errors	OTUD4	HGNC	ENSG00000164164	tier1	-	-	64	0	0.00	54	17	23.94
OTUD4	0	genome.wustl.edu	37	4	146059597	146059597	+	Missense_Mutation	SNP	T	T	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	4	146059597	146059597	T	A	SNP	OTUD4	ENST00000447906	human	ensembl	74_37	-1	known	missense	c.2330	p.N777I	1.000	NULL	pfam_OTU,pfscan_OTU	-	no_errors	OTUD4	HGNC	ENSG00000164164	tier1	-	-	66	0	0.00	54	17	23.94
OTUD6B	0	genome.wustl.edu	37	8	92097035	92097035	+	Nonsense_Mutation	SNP	T	T	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	8	92097035	92097035	T	G	SNP	OTUD6B	ENST00000285420	human	ensembl	74_37	+1	known	nonsense	c.911	p.L304*	1.000	pfam_OTU,pfscan_OTU	pfam_OTU,pfam_Peptidase_C65_otubain,pfscan_OTU	-	no_errors	OTUD6B	HGNC	ENSG00000155100				13	0	0.00	22	3	12.00
PAPPA2	0	genome.wustl.edu	37	1	176664899	176664899	+	Missense_Mutation	SNP	T	T	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	1	176664899	176664899	T	G	SNP	PAPPA2	ENST00000367662	human	ensembl	74_37	+1	known	missense	c.2650	p.C884G	0.999	superfamily_Fibronectin_type3	pfam_Notch_dom,pfam_Sushi_SCR_CCP,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA2	HGNC	ENSG00000116183	tier1	-	-	66	0	0.00	71	10	12.35
PAPPA2	0	genome.wustl.edu	37	1	176664899	176664899	+	Missense_Mutation	SNP	T	T	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	1	176664899	176664899	T	G	SNP	PAPPA2	ENST00000367662	human	ensembl	74_37	+1	known	missense	c.2650	p.C884G	0.999	superfamily_Fibronectin_type3	pfam_Notch_dom,pfam_Sushi_SCR_CCP,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA2	HGNC	ENSG00000116183	tier1	-	-	74	0	0.00	71	10	12.35
PCYT1B	0	genome.wustl.edu	37	X	24625955	24625955	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	X	24625955	24625955	C	T	SNP	PCYT1B	ENST00000379144	human	ensembl	74_37	-1	known	missense	c.241	p.A81T	1.000	pfam_Cyt_trans-like,tigrfam_Cyt_trans-like	pfam_Cyt_trans-like,tigrfam_Cyt_trans-like	-	no_errors	PCYT1B	HGNC	ENSG00000102230	tier1	-	-	22	0	0.00	21	5	19.23
PCYT1B	0	genome.wustl.edu	37	X	24625955	24625955	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	X	24625955	24625955	C	T	SNP	PCYT1B	ENST00000379144	human	ensembl	74_37	-1	known	missense	c.241	p.A81T	1.000	pfam_Cyt_trans-like,tigrfam_Cyt_trans-like	pfam_Cyt_trans-like,tigrfam_Cyt_trans-like	-	no_errors	PCYT1B	HGNC	ENSG00000102230	tier1	-	-	26	0	0.00	21	5	19.23
PDE11A	0	genome.wustl.edu	37	2	178681580	178681580	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	2	178681580	178681580	C	G	SNP	PDE11A	ENST00000286063	human	ensembl	74_37	-1	known	missense	c.1713	p.W571C	1.000	NULL	pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE11A	HGNC	ENSG00000128655	tier1	-	-	11	0	0.00	18	7	28.00
PDE11A	0	genome.wustl.edu	37	2	178681580	178681580	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	2	178681580	178681580	C	G	SNP	PDE11A	ENST00000286063	human	ensembl	74_37	-1	known	missense	c.1713	p.W571C	1.000	NULL	pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE11A	HGNC	ENSG00000128655	tier1	-	-	12	0	0.00	18	7	28.00
PDE4DIP	0	genome.wustl.edu	37	1	145039744	145039744	+	RNA	SNP	C	C	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	1	145039744	145039744	C	A	SNP	PDE4DIP	ENST00000485062	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PDE4DIP	HGNC	ENSG00000178104	tier1	-	-	38	0	0.00	46	4	8.00
PDPR	0	genome.wustl.edu	37	16	70154430	70154430	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	16	70154430	70154430	G	A	SNP	PDPR	ENST00000288050	human	ensembl	74_37	+1	known	missense	c.35	p.R12K	0.005	NULL	pfam_FAD-dep_OxRdtase,pfam_GCV_T_N,pfam_GCV_T_C,pfam_FAD_bind_dom	-	no_errors	PDPR	HGNC	ENSG00000090857	tier1	-	-	116	0	0.00	161	17	9.55
PDPR	0	genome.wustl.edu	37	16	70154430	70154430	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	16	70154430	70154430	G	A	SNP	PDPR	ENST00000288050	human	ensembl	74_37	+1	known	missense	c.35	p.R12K	0.005	NULL	pfam_FAD-dep_OxRdtase,pfam_GCV_T_N,pfam_GCV_T_C,pfam_FAD_bind_dom	-	no_errors	PDPR	HGNC	ENSG00000090857	tier1	-	-	118	0	0.00	161	17	9.55
PEG3	0	genome.wustl.edu	37	19	57325604	57325604	+	Silent	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	19	57325604	57325604	G	A	SNP	PEG3	ENST00000326441	human	ensembl	74_37	-1	known	silent	c.4206	p.A1402	0.011	NULL	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	PEG3	HGNC	ENSG00000198300	tier1	rs141987198	-	55	0	0.00	55	13	19.12
PEG3	0	genome.wustl.edu	37	19	57325604	57325604	+	Silent	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	19	57325604	57325604	G	A	SNP	PEG3	ENST00000326441	human	ensembl	74_37	-1	known	silent	c.4206	p.A1402	0.011	NULL	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	PEG3	HGNC	ENSG00000198300	tier1	rs141987198	-	63	0	0.00	55	13	19.12
PHF21A	0	genome.wustl.edu	37	11	45991391	45991391	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	11	45991391	45991391	G	A	SNP	PHF21A	ENST00000257821	human	ensembl	74_37	-1	known	missense	c.677	p.T226I	1.000	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF21A	HGNC	ENSG00000135365	tier1	-	-	59	0	0.00	88	23	20.72
PHF21A	0	genome.wustl.edu	37	11	45991391	45991391	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	11	45991391	45991391	G	A	SNP	PHF21A	ENST00000257821	human	ensembl	74_37	-1	known	missense	c.677	p.T226I	1.000	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF21A	HGNC	ENSG00000135365	tier1	-	-	65	0	0.00	88	23	20.72
PKHD1L1	0	genome.wustl.edu	37	8	110417360	110417360	+	Splice_Site	SNP	G	G	C			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	8	110417360	110417360	G	C	SNP	PKHD1L1	ENST00000378402	human	ensembl	74_37	+1	known	splice_site	c.1669+1	e16+1	1.000	-	-	-	no_errors	PKHD1L1	HGNC	ENSG00000205038	tier1	-	-	30	0	0.00	45	17	27.42
PKHD1L1	0	genome.wustl.edu	37	8	110417360	110417360	+	Splice_Site	SNP	G	G	C			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	8	110417360	110417360	G	C	SNP	PKHD1L1	ENST00000378402	human	ensembl	74_37	+1	known	splice_site	c.1669+1	e16+1	1.000	-	-	-	no_errors	PKHD1L1	HGNC	ENSG00000205038	tier1	-	-	37	0	0.00	45	17	27.42
PKP4	0	genome.wustl.edu	37	2	159526239	159526239	+	Silent	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	2	159526239	159526239	C	T	SNP	PKP4	ENST00000389759	human	ensembl	74_37	+1	known	silent	c.2736	p.Y912	0.936	superfamily_ARM-type_fold	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	PKP4	HGNC	ENSG00000144283	tier1	rs138568714	-	24	0	0.00	25	10	28.57
PKP4	0	genome.wustl.edu	37	2	159526239	159526239	+	Silent	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	2	159526239	159526239	C	T	SNP	PKP4	ENST00000389759	human	ensembl	74_37	+1	known	silent	c.2736	p.Y912	0.936	superfamily_ARM-type_fold	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	PKP4	HGNC	ENSG00000144283	tier1	rs138568714	-	25	0	0.00	25	10	28.57
PLCL1	0	genome.wustl.edu	37	2	198949317	198949317	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	2	198949317	198949317	G	T	SNP	PLCL1	ENST00000428675	human	ensembl	74_37	+1	known	missense	c.1076	p.R359I	1.000	pfam_PLipase_C_EF-hand-like	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_Pleckstrin_homology,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCL1	HGNC	ENSG00000115896	tier1	-	-	46	0	0.00	50	11	18.03
PLCL1	0	genome.wustl.edu	37	2	198949317	198949317	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	2	198949317	198949317	G	T	SNP	PLCL1	ENST00000428675	human	ensembl	74_37	+1	known	missense	c.1076	p.R359I	1.000	pfam_PLipase_C_EF-hand-like	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_Pleckstrin_homology,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCL1	HGNC	ENSG00000115896	tier1	-	-	49	0	0.00	50	11	18.03
PPFIBP2	0	genome.wustl.edu	37	11	7598559	7598560	+	RNA	INS	-	-	GTGC			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	11	7598559	7598560	-	GTGC	INS	PPFIBP2	ENST00000529021	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.008:0.018	-	-	-	no_errors	PPFIBP2	HGNC	ENSG00000166387	tier1			8	0	0.00	4	2	33.33
PPP4R4	0	genome.wustl.edu	37	14	94710984	94710984	+	Silent	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	14	94710984	94710984	C	T	SNP	PPP4R4	ENST00000304338	human	ensembl	74_37	+1	known	silent	c.1279	p.L427	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	PPP4R4	HGNC	ENSG00000119698	tier1	-	-	10	0	0.00	19	6	24.00
PPP4R4	0	genome.wustl.edu	37	14	94710984	94710984	+	Silent	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	14	94710984	94710984	C	T	SNP	PPP4R4	ENST00000304338	human	ensembl	74_37	+1	known	silent	c.1279	p.L427	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	PPP4R4	HGNC	ENSG00000119698	tier1	-	-	22	0	0.00	19	6	24.00
PRDM16	0	genome.wustl.edu	37	1	3329081	3329081	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	1	3329081	3329081	G	T	SNP	PRDM16	ENST00000270722	human	ensembl	74_37	+1	known	missense	c.2320	p.D774Y	1.000	NULL	pfam_Znf_C2H2,pfam_Znf_BED_prd,smart_SET_dom,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM16	HGNC	ENSG00000142611	tier1	-	-	103	0	0.00	63	15	19.23
PRDM16	0	genome.wustl.edu	37	1	3329081	3329081	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	1	3329081	3329081	G	T	SNP	PRDM16	ENST00000270722	human	ensembl	74_37	+1	known	missense	c.2320	p.D774Y	1.000	NULL	pfam_Znf_C2H2,pfam_Znf_BED_prd,smart_SET_dom,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM16	HGNC	ENSG00000142611	tier1	-	-	78	0	0.00	63	15	19.23
PRKD3	0	genome.wustl.edu	37	2	37513341	37513341	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	2	37513341	37513341	G	A	SNP	PRKD3	ENST00000234179	human	ensembl	74_37	-1	known	missense	c.889	p.R297C	1.000	pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_Kinase_C-like_PE/DAG-bd	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	PRKD3	HGNC	ENSG00000115825	tier1	-	-	39	0	0.00	55	6	9.84
PRKD3	0	genome.wustl.edu	37	2	37513341	37513341	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	2	37513341	37513341	G	A	SNP	PRKD3	ENST00000234179	human	ensembl	74_37	-1	known	missense	c.889	p.R297C	1.000	pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_Kinase_C-like_PE/DAG-bd	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	PRKD3	HGNC	ENSG00000115825	tier1	-	-	43	0	0.00	55	6	9.84
PRPF39	0	genome.wustl.edu	37	14	45564717	45564717	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	14	45564717	45564717	C	A	SNP	PRPF39	ENST00000355765	human	ensembl	74_37	+1	known	missense	c.275	p.P92H	1.000	NULL	smart_HAT	-	no_errors	PRPF39	HGNC	ENSG00000185246	tier1	-	-	8	0	0.00	8	6	42.86
PRRC2B	0	genome.wustl.edu	37	9	134363281	134363281	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	9	134363281	134363281	G	T	SNP	PRRC2B	ENST00000357304	human	ensembl	74_37	+1	known	missense	c.6023	p.S2008I	1.000	NULL	pfam_BAT2_N	-	no_errors	PRRC2B	HGNC	ENSG00000130723	tier1	-	-	55	0	0.00	54	25	31.65
PRRC2B	0	genome.wustl.edu	37	9	134363281	134363281	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	9	134363281	134363281	G	T	SNP	PRRC2B	ENST00000357304	human	ensembl	74_37	+1	known	missense	c.6023	p.S2008I	1.000	NULL	pfam_BAT2_N	-	no_errors	PRRC2B	HGNC	ENSG00000130723	tier1	-	-	65	0	0.00	54	25	31.65
PSMD6	0	genome.wustl.edu	37	3	64004295	64004295	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	3	64004295	64004295	G	T	SNP	PSMD6	ENST00000295901	human	ensembl	74_37	-1	known	missense	c.806	p.S269Y	0.998	pfam_PCI_dom	pfam_26S_proteasome_reg_su-Rpn7,pfam_PCI_dom,smart_PCI_dom	-	no_errors	PSMD6	HGNC	ENSG00000163636				28	0	0.00	24	2	7.69
PSME4	0	genome.wustl.edu	37	2	54133795	54133795	+	Missense_Mutation	SNP	T	T	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	2	54133795	54133795	T	A	SNP	PSME4	ENST00000404125	human	ensembl	74_37	-1	known	missense	c.2883	p.K961N	1.000	superfamily_ARM-type_fold	pfam_DUF3437,superfamily_ARM-type_fold	-	no_errors	PSME4	HGNC	ENSG00000068878	tier1	-	-	31	0	0.00	36	20	35.71
PSME4	0	genome.wustl.edu	37	2	54133795	54133795	+	Missense_Mutation	SNP	T	T	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	2	54133795	54133795	T	A	SNP	PSME4	ENST00000404125	human	ensembl	74_37	-1	known	missense	c.2883	p.K961N	1.000	superfamily_ARM-type_fold	pfam_DUF3437,superfamily_ARM-type_fold	-	no_errors	PSME4	HGNC	ENSG00000068878	tier1	-	-	36	0	0.00	36	20	35.71
RAB33B	0	genome.wustl.edu	37	4	140394184	140394184	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	4	140394184	140394184	G	T	SNP	RAB33B	ENST00000305626	human	ensembl	74_37	+1	known	missense	c.594	p.K198N	1.000	pfam_Small_GTPase,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,pfam_EF_GTP-bd_dom,pfam_SRP_receptor_beta_su,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB33B	HGNC	ENSG00000172007	tier1	-	-	24	0	0.00	9	3	25.00
RECQL	0	genome.wustl.edu	37	12	21639443	21639443	+	Silent	SNP	T	T	C			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	12	21639443	21639443	T	C	SNP	RECQL	ENST00000421138	human	ensembl	74_37	-1	known	silent	c.471	p.S157	1.000	pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd,tigrfam_DNA_helicase_ATP-dep_RecQ	pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_RQC_domain,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	-	no_errors	RECQL	HGNC	ENSG00000004700				85	0	0.00	74	4	5.13
REG3G	0	genome.wustl.edu	37	2	79255036	79255036	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	2	79255036	79255036	G	T	SNP	REG3G	ENST00000272324	human	ensembl	74_37	+1	known	missense	c.437	p.C146F	0.862	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	REG3G	HGNC	ENSG00000143954	tier1	-	-	37	0	0.00	54	5	8.47
REG3G	0	genome.wustl.edu	37	2	79255036	79255036	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	2	79255036	79255036	G	T	SNP	REG3G	ENST00000272324	human	ensembl	74_37	+1	known	missense	c.437	p.C146F	0.862	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	REG3G	HGNC	ENSG00000143954	tier1	-	-	69	0	0.00	54	5	8.47
RRN3	0	genome.wustl.edu	37	16	15159153	15159153	+	Silent	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	16	15159153	15159153	G	A	SNP	RRN3	ENST00000198767	human	ensembl	74_37	-1	known	silent	c.1629	p.T543	0.012	pfam_RNA_pol_I_trans_ini_fac_RRN3	pfam_RNA_pol_I_trans_ini_fac_RRN3,superfamily_ARM-type_fold	-	no_errors	RRN3	HGNC	ENSG00000085721	tier1	-	-	65	0	0.00	110	14	11.29
RRN3	0	genome.wustl.edu	37	16	15159153	15159153	+	Silent	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	16	15159153	15159153	G	A	SNP	RRN3	ENST00000198767	human	ensembl	74_37	-1	known	silent	c.1629	p.T543	0.012	pfam_RNA_pol_I_trans_ini_fac_RRN3	pfam_RNA_pol_I_trans_ini_fac_RRN3,superfamily_ARM-type_fold	-	no_errors	RRN3	HGNC	ENSG00000085721	tier1	-	-	88	0	0.00	110	14	11.29
SESTD1	0	genome.wustl.edu	37	2	179986657	179986657	+	Splice_Site	SNP	C	C	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	2	179986657	179986657	C	G	SNP	SESTD1	ENST00000428443	human	ensembl	74_37	-1	known	splice_site	c.1283-1	e12-1	1.000	-	-	-	no_errors	SESTD1	HGNC	ENSG00000187231	tier1	-	-	30	0	0.00	27	12	30.77
SESTD1	0	genome.wustl.edu	37	2	179986657	179986657	+	Splice_Site	SNP	C	C	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	2	179986657	179986657	C	G	SNP	SESTD1	ENST00000428443	human	ensembl	74_37	-1	known	splice_site	c.1283-1	e12-1	1.000	-	-	-	no_errors	SESTD1	HGNC	ENSG00000187231	tier1	-	-	33	0	0.00	27	12	30.77
SETD8	0	genome.wustl.edu	37	12	123879766	123879766	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	12	123879766	123879766	G	T	SNP	SETD8	ENST00000330479	human	ensembl	74_37	+1	known	missense	c.462	p.K154N	1.000	pirsf_Hist_H4-K20_MeTrfase	pfam_SET_dom,smart_SET_dom,pirsf_Hist_H4-K20_MeTrfase,pfscan_SET_dom	-	no_errors	SETD8	HGNC	ENSG00000183955	tier1	-	-	32	0	0.00	26	4	13.33
SETD8	0	genome.wustl.edu	37	12	123879766	123879766	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	12	123879766	123879766	G	T	SNP	SETD8	ENST00000330479	human	ensembl	74_37	+1	known	missense	c.462	p.K154N	1.000	pirsf_Hist_H4-K20_MeTrfase	pfam_SET_dom,smart_SET_dom,pirsf_Hist_H4-K20_MeTrfase,pfscan_SET_dom	-	no_errors	SETD8	HGNC	ENSG00000183955	tier1	-	-	34	0	0.00	26	4	13.33
SIRT3	0	genome.wustl.edu	37	11	233167	233167	+	Silent	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	11	233167	233167	C	T	SNP	SIRT3	ENST00000382743	human	ensembl	74_37	-1	known	silent	c.522	p.P174	0.002	pfam_Sirtuin,pirsf_NAD-dep_deAcase_SIR2_class_I,pfscan_Ssirtuin_cat_dom	pfam_Sirtuin,pirsf_NAD-dep_deAcase_SIR2_class_I,pfscan_Ssirtuin_cat_dom	-	no_errors	SIRT3	HGNC	ENSG00000142082	tier1	rs148488998	-	35	0	0.00	50	5	9.09
SIRT3	0	genome.wustl.edu	37	11	233167	233167	+	Silent	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	11	233167	233167	C	T	SNP	SIRT3	ENST00000382743	human	ensembl	74_37	-1	known	silent	c.522	p.P174	0.002	pfam_Sirtuin,pirsf_NAD-dep_deAcase_SIR2_class_I,pfscan_Ssirtuin_cat_dom	pfam_Sirtuin,pirsf_NAD-dep_deAcase_SIR2_class_I,pfscan_Ssirtuin_cat_dom	-	no_errors	SIRT3	HGNC	ENSG00000142082	tier1	rs148488998	-	39	0	0.00	50	5	9.09
SLC12A8	0	genome.wustl.edu	37	3	124854513	124854513	+	Nonsense_Mutation	SNP	C	C	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	3	124854513	124854513	C	A	SNP	SLC12A8	ENST00000423114	human	ensembl	74_37	-1	known	nonsense	c.823	p.G275*	1.000	pfam_AA-permease/SLC12A_dom	pfam_AA-permease/SLC12A_dom,superfamily_ABC1_TM_dom	-	no_errors	SLC12A8	HGNC	ENSG00000221955	tier1	-	-	26	0	0.00	32	4	11.11
SLC38A8	0	genome.wustl.edu	37	16	84050269	84050269	+	Silent	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	16	84050269	84050269	G	A	SNP	SLC38A8	ENST00000299709	human	ensembl	74_37	-1	known	silent	c.1017	p.A339	0.017	pfam_AA_transpt_TM	pfam_AA_transpt_TM,pfam_Tryptophan/tyrosine_permease	-	no_errors	SLC38A8	HGNC	ENSG00000166558	tier1	rs144115936	-	11	0	0.00	22	9	29.03
SLC38A8	0	genome.wustl.edu	37	16	84050269	84050269	+	Silent	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	16	84050269	84050269	G	A	SNP	SLC38A8	ENST00000299709	human	ensembl	74_37	-1	known	silent	c.1017	p.A339	0.017	pfam_AA_transpt_TM	pfam_AA_transpt_TM,pfam_Tryptophan/tyrosine_permease	-	no_errors	SLC38A8	HGNC	ENSG00000166558	tier1	rs144115936	-	25	0	0.00	22	9	29.03
SLC9A5	0	genome.wustl.edu	37	16	67288942	67288942	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	16	67288942	67288942	G	T	SNP	SLC9A5	ENST00000299798	human	ensembl	74_37	+1	known	missense	c.509	p.G170V	1.000	pfam_Cation/H_exchanger,tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,prints_Na/H_exchanger_3/5,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A5	HGNC	ENSG00000135740	tier1	-	-	64	0	0.00	70	53	43.09
SLC9A5	0	genome.wustl.edu	37	16	67288942	67288942	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	16	67288942	67288942	G	T	SNP	SLC9A5	ENST00000299798	human	ensembl	74_37	+1	known	missense	c.509	p.G170V	1.000	pfam_Cation/H_exchanger,tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,prints_Na/H_exchanger_3/5,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A5	HGNC	ENSG00000135740	tier1	-	-	90	0	0.00	70	53	43.09
SLC9C2	0	genome.wustl.edu	37	1	173502849	173502849	+	Missense_Mutation	SNP	A	A	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	1	173502849	173502849	A	G	SNP	SLC9C2	ENST00000367714	human	ensembl	74_37	-1	known	missense	c.2062	p.C688R	0.010	NULL	pfam_Cation/H_exchanger,pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,pfscan_cNMP-bd_dom	-	no_errors	SLC9C2	HGNC	ENSG00000162753	tier1	-	-	43	0	0.00	62	4	6.06
SLC9C2	0	genome.wustl.edu	37	1	173502849	173502849	+	Missense_Mutation	SNP	A	A	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	1	173502849	173502849	A	G	SNP	SLC9C2	ENST00000367714	human	ensembl	74_37	-1	known	missense	c.2062	p.C688R	0.010	NULL	pfam_Cation/H_exchanger,pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,pfscan_cNMP-bd_dom	-	no_errors	SLC9C2	HGNC	ENSG00000162753	tier1	-	-	51	0	0.00	62	4	6.06
SNAI2	0	genome.wustl.edu	37	8	49832626	49832626	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	8	49832626	49832626	C	T	SNP	SNAI2	ENST00000020945	human	ensembl	74_37	-1	known	missense	c.454	p.D152N	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SNAI2	HGNC	ENSG00000019549	tier1	-	-	50	0	0.00	86	16	15.69
SNAI2	0	genome.wustl.edu	37	8	49832626	49832626	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	8	49832626	49832626	C	T	SNP	SNAI2	ENST00000020945	human	ensembl	74_37	-1	known	missense	c.454	p.D152N	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SNAI2	HGNC	ENSG00000019549	tier1	-	-	66	0	0.00	86	16	15.69
SNTA1	0	genome.wustl.edu	37	20	31997973	31997973	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	20	31997973	31997973	C	T	SNP	SNTA1	ENST00000217381	human	ensembl	74_37	-1	known	missense	c.1205	p.R402Q	0.999	smart_Pleckstrin_homology	pfam_PDZ,superfamily_PDZ,smart_Pleckstrin_homology,smart_PDZ,pfscan_PDZ,pfscan_Pleckstrin_homology	-	no_errors	SNTA1	HGNC	ENSG00000101400	tier1	-	-	46	0	0.00	95	24	20.00
SNTA1	0	genome.wustl.edu	37	20	31997973	31997973	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	20	31997973	31997973	C	T	SNP	SNTA1	ENST00000217381	human	ensembl	74_37	-1	known	missense	c.1205	p.R402Q	0.999	smart_Pleckstrin_homology	pfam_PDZ,superfamily_PDZ,smart_Pleckstrin_homology,smart_PDZ,pfscan_PDZ,pfscan_Pleckstrin_homology	-	no_errors	SNTA1	HGNC	ENSG00000101400	tier1	-	-	51	0	0.00	95	24	20.00
SPTBN2	0	genome.wustl.edu	37	11	66458832	66458832	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	11	66458832	66458832	G	A	SNP	SPTBN2	ENST00000309996	human	ensembl	74_37	-1	known	missense	c.5488	p.R1830C	1.000	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN2	HGNC	ENSG00000173898	tier1	-	-	35	0	0.00	45	13	22.41
SPTBN2	0	genome.wustl.edu	37	11	66458832	66458832	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	11	66458832	66458832	G	A	SNP	SPTBN2	ENST00000309996	human	ensembl	74_37	-1	known	missense	c.5488	p.R1830C	1.000	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN2	HGNC	ENSG00000173898	tier1	-	-	66	0	0.00	45	13	22.41
SUGP2	0	genome.wustl.edu	37	19	19120669	19120669	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	19	19120669	19120669	G	T	SNP	SUGP2	ENST00000337018	human	ensembl	74_37	-1	known	missense	c.2333	p.A778D	0.015	superfamily_Surp	pfam_Surp,pfam_G_patch_dom,superfamily_Surp,smart_Surp,smart_G_patch_dom,pfscan_Surp,pfscan_G_patch_dom	-	no_errors	SUGP2	HGNC	ENSG00000064607				34	0	0.00	31	2	6.06
SYBU	0	genome.wustl.edu	37	8	110587571	110587571	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	8	110587571	110587571	G	A	SNP	SYBU	ENST00000276646	human	ensembl	74_37	-1	known	missense	c.1556	p.A519V	0.000	NULL	NULL	-	no_errors	SYBU	HGNC	ENSG00000147642	tier1	-	-	28	0	0.00	50	4	7.41
SYBU	0	genome.wustl.edu	37	8	110587571	110587571	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	8	110587571	110587571	G	A	SNP	SYBU	ENST00000276646	human	ensembl	74_37	-1	known	missense	c.1556	p.A519V	0.000	NULL	NULL	-	no_errors	SYBU	HGNC	ENSG00000147642	tier1	-	-	49	0	0.00	50	4	7.41
SYTL3	0	genome.wustl.edu	37	6	159178395	159178395	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	6	159178395	159178395	G	T	SNP	SYTL3	ENST00000297239	human	ensembl	74_37	+1	known	missense	c.1290	p.W430C	1.000	superfamily_C2_dom	pfam_C2_dom,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,smart_C2_dom,pfscan_C2_dom,pfscan_Znf_FYVE-typ	-	no_errors	SYTL3	HGNC	ENSG00000164674	tier1	-	-	42	0	0.00	51	4	7.27
SYTL3	0	genome.wustl.edu	37	6	159178395	159178395	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	6	159178395	159178395	G	T	SNP	SYTL3	ENST00000297239	human	ensembl	74_37	+1	known	missense	c.1290	p.W430C	1.000	superfamily_C2_dom	pfam_C2_dom,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,smart_C2_dom,pfscan_C2_dom,pfscan_Znf_FYVE-typ	-	no_errors	SYTL3	HGNC	ENSG00000164674	tier1	-	-	59	0	0.00	51	4	7.27
TBXA2R	0	genome.wustl.edu	37	19	3600557	3600557	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	19	3600557	3600557	C	T	SNP	TBXA2R	ENST00000411851	human	ensembl	74_37	-1	known	missense	c.76	p.A26T	1.000	prints_Thbox_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Thbox_rcpt,prints_Prostanoid_rcpt,prints_GPCR_Rhodpsn	-	no_errors	TBXA2R	HGNC	ENSG00000006638	tier1	-	-	45	0	0.00	50	12	19.35
TBXA2R	0	genome.wustl.edu	37	19	3600557	3600557	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	19	3600557	3600557	C	T	SNP	TBXA2R	ENST00000411851	human	ensembl	74_37	-1	known	missense	c.76	p.A26T	1.000	prints_Thbox_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Thbox_rcpt,prints_Prostanoid_rcpt,prints_GPCR_Rhodpsn	-	no_errors	TBXA2R	HGNC	ENSG00000006638	tier1	-	-	61	0	0.00	50	12	19.35
TCEB3B	0	genome.wustl.edu	37	18	44560933	44560933	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	18	44560933	44560933	G	T	SNP	TCEB3B	ENST00000332567	human	ensembl	74_37	-1	known	missense	c.703	p.R235S	0.000	NULL	pfam_RNA_pol_II_trans_fac_SIII_A,pfam_TFIIS_N,superfamily_TFIIS_N,smart_TFIIS/CRSP70_N_sub	-	no_errors	TCEB3B	HGNC	ENSG00000206181	tier1	-	-	37	0	0.00	66	5	7.04
TCEB3B	0	genome.wustl.edu	37	18	44560933	44560933	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	18	44560933	44560933	G	T	SNP	TCEB3B	ENST00000332567	human	ensembl	74_37	-1	known	missense	c.703	p.R235S	0.000	NULL	pfam_RNA_pol_II_trans_fac_SIII_A,pfam_TFIIS_N,superfamily_TFIIS_N,smart_TFIIS/CRSP70_N_sub	-	no_errors	TCEB3B	HGNC	ENSG00000206181	tier1	-	-	59	0	0.00	66	5	7.04
TCTN1	0	genome.wustl.edu	37	12	111072534	111072534	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	12	111072534	111072534	G	T	SNP	TCTN1	ENST00000397659	human	ensembl	74_37	+1	known	nonsense	c.772	p.E258*	0.133	pfam_DUF1619	pfam_DUF1619	-	no_errors	TCTN1	HGNC	ENSG00000204852	tier1	-	-	27	0	0.00	39	5	11.36
TCTN1	0	genome.wustl.edu	37	12	111072534	111072534	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	12	111072534	111072534	G	T	SNP	TCTN1	ENST00000397659	human	ensembl	74_37	+1	known	nonsense	c.772	p.E258*	0.133	pfam_DUF1619	pfam_DUF1619	-	no_errors	TCTN1	HGNC	ENSG00000204852	tier1	-	-	35	0	0.00	39	5	11.36
TDO2	0	genome.wustl.edu	37	4	156831333	156831333	+	Silent	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	4	156831333	156831333	G	A	SNP	TDO2	ENST00000536354	human	ensembl	74_37	+1	known	silent	c.588	p.E196	1.000	pfam_Trp_2_3_dOase	pfam_Trp_2_3_dOase	-	no_errors	TDO2	HGNC	ENSG00000151790	tier1	-	-	14	0	0.00	16	7	30.43
TDO2	0	genome.wustl.edu	37	4	156831333	156831333	+	Silent	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	4	156831333	156831333	G	A	SNP	TDO2	ENST00000536354	human	ensembl	74_37	+1	known	silent	c.588	p.E196	1.000	pfam_Trp_2_3_dOase	pfam_Trp_2_3_dOase	-	no_errors	TDO2	HGNC	ENSG00000151790	tier1	-	-	23	0	0.00	16	7	30.43
THSD1	0	genome.wustl.edu	37	13	52951806	52951806	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	13	52951806	52951806	G	T	SNP	THSD1	ENST00000258613	human	ensembl	74_37	-1	known	missense	c.2299	p.H767N	1.000	NULL	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD1	HGNC	ENSG00000136114				62	0	0.00	71	4	5.33
TIGIT	0	genome.wustl.edu	37	3	114018535	114018535	+	Silent	SNP	C	C	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	3	114018535	114018535	C	A	SNP	TIGIT	ENST00000383671	human	ensembl	74_37	+1	known	silent	c.483	p.V161	0.000	NULL	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	TIGIT	HGNC	ENSG00000181847	tier1	-	-	34	0	0.00	28	37	56.92
TIGIT	0	genome.wustl.edu	37	3	114018535	114018535	+	Silent	SNP	C	C	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	3	114018535	114018535	C	A	SNP	TIGIT	ENST00000383671	human	ensembl	74_37	+1	known	silent	c.483	p.V161	0.000	NULL	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	TIGIT	HGNC	ENSG00000181847	tier1	-	-	65	0	0.00	28	37	56.92
TMEM178B	0	genome.wustl.edu	37	7	140912469	140912469	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	7	140912469	140912469	C	T	SNP	TMEM178B	ENST00000565468	human	ensembl	74_37	+1	putative	missense	c.461	p.T154M	1.000	NULL	NULL	-	no_errors	TMEM178B	HGNC	ENSG00000261115	tier1	-	-	59	0	0.00	66	6	8.33
TMEM178B	0	genome.wustl.edu	37	7	140912469	140912469	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	7	140912469	140912469	C	T	SNP	TMEM178B	ENST00000565468	human	ensembl	74_37	+1	putative	missense	c.461	p.T154M	1.000	NULL	NULL	-	no_errors	TMEM178B	HGNC	ENSG00000261115	tier1	-	-	62	0	0.00	66	6	8.33
TNC	0	genome.wustl.edu	37	9	117825355	117825355	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	9	117825355	117825355	C	T	SNP	TNC	ENST00000350763	human	ensembl	74_37	-1	known	missense	c.3874	p.E1292K	0.968	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNC	HGNC	ENSG00000041982	tier1	-	-	52	0	0.00	67	43	39.09
TNIK	0	genome.wustl.edu	37	3	170846630	170846630	+	Frame_Shift_Del	DEL	G	G	-			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	3	170846630	170846630	G	-	DEL	TNIK	ENST00000436636	human	ensembl	74_37	-1	known	frame_shift_del	c.1646	p.P549fs	1.000	NULL	pfam_Prot_kinase_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_dom	-	no_errors	TNIK	HGNC	ENSG00000154310	tier1			11	0	0.00	6	11	64.71
TNIK	0	genome.wustl.edu	37	3	170846630	170846630	+	Frame_Shift_Del	DEL	G	G	-			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	3	170846630	170846630	G	-	DEL	TNIK	ENST00000436636	human	ensembl	74_37	-1	known	frame_shift_del	c.1646	p.P549fs	1.000	NULL	pfam_Prot_kinase_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_dom	-	no_errors	TNIK	HGNC	ENSG00000154310	tier1			9	0	0.00	6	11	64.71
TP53	0	genome.wustl.edu	37	17	7578406	7578406	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	17	7578406	7578406	C	T	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.524	p.R175H	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	rs28934578	-	29	0	0.00	9	25	73.53
TPP1	0	genome.wustl.edu	37	11	6637740	6637743	+	RNA	DEL	TTTT	TTTT	-			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	TTTT	TTTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	11	6637740	6637743	TTTT	-	DEL	TPP1	ENST00000528807	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.237:0.105:0.000:0.000	-	-	-	no_errors	TPP1	HGNC	ENSG00000166340	tier1			11	0	0.00	12	2	14.29
TPP1	0	genome.wustl.edu	37	11	6637740	6637743	+	RNA	DEL	TTTT	TTTT	-			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	TTTT	TTTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	11	6637740	6637743	TTTT	-	DEL	TPP1	ENST00000528807	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.237:0.105:0.000:0.000	-	-	-	no_errors	TPP1	HGNC	ENSG00000166340	tier1			12	0	0.00	12	2	14.29
TPR	0	genome.wustl.edu	37	1	186302444	186302444	+	Silent	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	1	186302444	186302444	G	T	SNP	TPR	ENST00000367478	human	ensembl	74_37	-1	known	silent	c.5265	p.V1755	1.000	NULL	pfam_TPR_MLP1_2,superfamily_Prefoldin,superfamily_tRNA-bd_arm	-	no_errors	TPR	HGNC	ENSG00000047410	tier1	-	-	35	0	0.00	62	5	7.46
TPR	0	genome.wustl.edu	37	1	186302444	186302444	+	Silent	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	1	186302444	186302444	G	T	SNP	TPR	ENST00000367478	human	ensembl	74_37	-1	known	silent	c.5265	p.V1755	1.000	NULL	pfam_TPR_MLP1_2,superfamily_Prefoldin,superfamily_tRNA-bd_arm	-	no_errors	TPR	HGNC	ENSG00000047410	tier1	-	-	43	0	0.00	62	5	7.46
TRPC5	0	genome.wustl.edu	37	X	111195502	111195502	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	X	111195502	111195502	C	A	SNP	TRPC5	ENST00000262839	human	ensembl	74_37	-1	known	missense	c.147	p.K49N	1.000	superfamily_Ankyrin_rpt-contain_dom,tigrfam_TRP_channel	pfam_Ion_trans_dom,pfam_TRP_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,prints_TRPC5_channel,prints_TRPC_channel,tigrfam_TRP_channel	-	no_errors	TRPC5	HGNC	ENSG00000072315	tier1	-	-	14	0	0.00	10	17	62.96
TRPC5	0	genome.wustl.edu	37	X	111195502	111195502	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	X	111195502	111195502	C	A	SNP	TRPC5	ENST00000262839	human	ensembl	74_37	-1	known	missense	c.147	p.K49N	1.000	superfamily_Ankyrin_rpt-contain_dom,tigrfam_TRP_channel	pfam_Ion_trans_dom,pfam_TRP_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,prints_TRPC5_channel,prints_TRPC_channel,tigrfam_TRP_channel	-	no_errors	TRPC5	HGNC	ENSG00000072315	tier1	-	-	32	0	0.00	10	17	62.96
TRPM7	0	genome.wustl.edu	37	15	50955214	50955214	+	Silent	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	15	50955214	50955214	C	T	SNP	TRPM7	ENST00000313478	human	ensembl	74_37	-1	known	silent	c.33	p.L11	1.000	NULL	pfam_MHCK_EF2_kinase,pfam_Ion_trans_dom,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase	-	no_errors	TRPM7	HGNC	ENSG00000092439	tier1	-	-	25	0	0.00	28	5	15.15
TRPM7	0	genome.wustl.edu	37	15	50955214	50955214	+	Silent	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	15	50955214	50955214	C	T	SNP	TRPM7	ENST00000313478	human	ensembl	74_37	-1	known	silent	c.33	p.L11	1.000	NULL	pfam_MHCK_EF2_kinase,pfam_Ion_trans_dom,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase	-	no_errors	TRPM7	HGNC	ENSG00000092439	tier1	-	-	32	0	0.00	28	5	15.15
TTN	0	genome.wustl.edu	37	2	179647637	179647637	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	2	179647637	179647637	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.2996	p.R999H	1.000	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	25	0	0.00	33	14	29.79
TTN	0	genome.wustl.edu	37	2	179647637	179647637	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	2	179647637	179647637	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.2996	p.R999H	1.000	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	28	0	0.00	33	14	29.79
TUBA3C	0	genome.wustl.edu	37	13	19748204	19748204	+	Silent	SNP	G	G	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	13	19748204	19748204	G	A	SNP	TUBA3C	ENST00000400113	human	ensembl	74_37	-1	known	silent	c.1152	p.I384	1.000	pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tub_FtsZ_C,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Tubulin,prints_Delta_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin,prints_Beta_tubulin	-	no_errors	TUBA3C	HGNC	ENSG00000198033	tier1	rs1052403	-	65	0	0.00	79	17	17.71
UBR4	0	genome.wustl.edu	37	1	19440388	19440388	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	1	19440388	19440388	C	G	SNP	UBR4	ENST00000375218	human	ensembl	74_37	-1	known	missense	c.624	p.Q208H	0.001	NULL	NULL	-	no_errors	UBR4	HGNC	ENSG00000127481	tier1	-	-	28	0	0.00	27	7	20.59
UBR4	0	genome.wustl.edu	37	1	19440388	19440388	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	1	19440388	19440388	C	G	SNP	UBR4	ENST00000375218	human	ensembl	74_37	-1	known	missense	c.624	p.Q208H	0.001	NULL	NULL	-	no_errors	UBR4	HGNC	ENSG00000127481	tier1	-	-	31	0	0.00	27	7	20.59
UPF3B	0	genome.wustl.edu	37	X	118975734	118975734	+	Silent	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	X	118975734	118975734	C	T	SNP	UPF3B	ENST00000276201	human	ensembl	74_37	-1	known	silent	c.588	p.K196	1.000	pfam_Nonsense_mediated_decay_UPF3	pfam_Nonsense_mediated_decay_UPF3	-	no_errors	UPF3B	HGNC	ENSG00000125351	tier1	-	-	39	0	0.00	63	6	8.70
UPF3B	0	genome.wustl.edu	37	X	118975734	118975734	+	Silent	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	X	118975734	118975734	C	T	SNP	UPF3B	ENST00000276201	human	ensembl	74_37	-1	known	silent	c.588	p.K196	1.000	pfam_Nonsense_mediated_decay_UPF3	pfam_Nonsense_mediated_decay_UPF3	-	no_errors	UPF3B	HGNC	ENSG00000125351	tier1	-	-	51	0	0.00	63	6	8.70
VPS13C	0	genome.wustl.edu	37	15	62209684	62209684	+	Silent	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	15	62209684	62209684	G	T	SNP	VPS13C	ENST00000261517	human	ensembl	74_37	-1	known	silent	c.7911	p.L2637	0.939	NULL	pfam_VPSAP_dom,pfam_Autophagy-rel_C	-	no_errors	VPS13C	HGNC	ENSG00000129003	tier1	-	-	46	0	0.00	75	4	5.06
VPS13C	0	genome.wustl.edu	37	15	62209684	62209684	+	Silent	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	15	62209684	62209684	G	T	SNP	VPS13C	ENST00000261517	human	ensembl	74_37	-1	known	silent	c.7911	p.L2637	0.939	NULL	pfam_VPSAP_dom,pfam_Autophagy-rel_C	-	no_errors	VPS13C	HGNC	ENSG00000129003	tier1	-	-	52	0	0.00	75	4	5.06
VSTM2B	0	genome.wustl.edu	37	19	30054821	30054821	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	19	30054821	30054821	C	T	SNP	VSTM2B	ENST00000335523	human	ensembl	74_37	+1	known	missense	c.838	p.R280C	0.087	NULL	pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	VSTM2B	HGNC	ENSG00000187135	tier1	-	-	38	0	0.00	37	16	30.19
VSTM2B	0	genome.wustl.edu	37	19	30054821	30054821	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	19	30054821	30054821	C	T	SNP	VSTM2B	ENST00000335523	human	ensembl	74_37	+1	known	missense	c.838	p.R280C	0.087	NULL	pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	VSTM2B	HGNC	ENSG00000187135	tier1	-	-	46	0	0.00	37	16	30.19
VWDE	0	genome.wustl.edu	37	7	12409792	12409792	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	7	12409792	12409792	G	T	SNP	VWDE	ENST00000452576	human	ensembl	74_37	-1	known	missense	c.2140	p.H714N	0.000	NULL	pfam_VWF_type-D,superfamily_Cadherin-like,smart_VWF_type-D,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	VWDE	HGNC	ENSG00000146530	tier1	-	-	51	0	0.00	31	25	44.64
VWDE	0	genome.wustl.edu	37	7	12409792	12409792	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	7	12409792	12409792	G	T	SNP	VWDE	ENST00000452576	human	ensembl	74_37	-1	known	missense	c.2140	p.H714N	0.000	NULL	pfam_VWF_type-D,superfamily_Cadherin-like,smart_VWF_type-D,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	VWDE	HGNC	ENSG00000146530	tier1	-	-	60	0	0.00	31	25	44.64
WDR78	0	genome.wustl.edu	37	1	67313346	67313346	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	1	67313346	67313346	G	T	SNP	WDR78	ENST00000371026	human	ensembl	74_37	-1	known	missense	c.1112	p.S371Y	0.993	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR78	HGNC	ENSG00000152763				28	0	0.00	37	2	5.13
WISP3	0	genome.wustl.edu	37	6	112389434	112389434	+	Frame_Shift_Del	DEL	A	A	-			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	6	112389434	112389434	A	-	DEL	WISP3	ENST00000361714	human	ensembl	74_37	+1	known	frame_shift_del	c.670	p.K226fs	1.000	superfamily_Thrombospondin_1_rpt,pirsf_IGFBP_CNN,pfscan_Thrombospondin_1_rpt	pfam_IGFBP-like,pfam_Cys_knot,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_IGFBP-like,smart_Thrombospondin_1_rpt,smart_Cys_knot_C,pirsf_IGFBP_CNN,pfscan_Cys_knot_C,pfscan_Thrombospondin_1_rpt	-	no_errors	WISP3	HGNC	ENSG00000112761	tier1			15	0	0.00	21	3	12.50
WWTR1	0	genome.wustl.edu	37	3	149290715	149290715	+	Silent	SNP	G	G	C			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	3	149290715	149290715	G	C	SNP	WWTR1	ENST00000360632	human	ensembl	74_37	-1	known	silent	c.504	p.L168	1.000	NULL	pfam_WW_dom,superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	-	no_errors	WWTR1	HGNC	ENSG00000018408	tier1	-	-	100	0	0.00	138	23	14.29
WWTR1	0	genome.wustl.edu	37	3	149290715	149290715	+	Silent	SNP	G	G	C			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	3	149290715	149290715	G	C	SNP	WWTR1	ENST00000360632	human	ensembl	74_37	-1	known	silent	c.504	p.L168	1.000	NULL	pfam_WW_dom,superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	-	no_errors	WWTR1	HGNC	ENSG00000018408	tier1	-	-	114	0	0.00	138	23	14.29
ZC3H12B	0	genome.wustl.edu	37	X	64709206	64709206	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	X	64709206	64709206	C	A	SNP	ZC3H12B	ENST00000338957	human	ensembl	74_37	+1	known	missense	c.525	p.S175R	0.980	NULL	pfam_RNase_Zc3h12	-	no_errors	ZC3H12B	HGNC	ENSG00000102053	tier1	-	-	25	0	0.00	28	5	15.15
ZC3H12B	0	genome.wustl.edu	37	X	64709206	64709206	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	X	64709206	64709206	C	A	SNP	ZC3H12B	ENST00000338957	human	ensembl	74_37	+1	known	missense	c.525	p.S175R	0.980	NULL	pfam_RNase_Zc3h12	-	no_errors	ZC3H12B	HGNC	ENSG00000102053	tier1	-	-	27	0	0.00	28	5	15.15
ZC3H12D	0	genome.wustl.edu	37	6	149782909	149782909	+	RNA	SNP	G	G	C			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	6	149782909	149782909	G	C	SNP	ZC3H12D	ENST00000462655	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZC3H12D	HGNC	ENSG00000178199	tier1	-	-	46	0	0.00	49	20	28.99
ZC3H12D	0	genome.wustl.edu	37	6	149782909	149782909	+	RNA	SNP	G	G	C			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	6	149782909	149782909	G	C	SNP	ZC3H12D	ENST00000462655	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZC3H12D	HGNC	ENSG00000178199	tier1	-	-	54	0	0.00	49	20	28.99
ZC3H3	0	genome.wustl.edu	37	8	144522386	144522386	+	Silent	SNP	T	T	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	8	144522386	144522386	T	G	SNP	ZC3H3	ENST00000262577	human	ensembl	74_37	-1	known	silent	c.2640	p.S880	0.000	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H3	HGNC	ENSG00000014164				37	0	0.00	65	4	5.80
ZFPM2	0	genome.wustl.edu	37	8	106815021	106815021	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	8	106815021	106815021	G	T	SNP	ZFPM2	ENST00000407775	human	ensembl	74_37	+1	known	missense	c.2711	p.S904I	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFPM2	HGNC	ENSG00000169946				14	0	0.00	24	2	7.69
ZMYND11	0	genome.wustl.edu	37	10	287978	287978	+	Silent	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	10	287978	287978	G	T	SNP	ZMYND11	ENST00000381591	human	ensembl	74_37	+1	known	silent	c.849	p.L283	1.000	pfam_PWWP_dom,smart_PWWP_dom,pfscan_PWWP_dom	pfam_PWWP_dom,pfam_Bromodomain,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Bromodomain,smart_PWWP_dom,pfscan_PWWP_dom,pfscan_Znf_MYND,pfscan_Znf_PHD-finger,pfscan_Bromodomain	-	no_errors	ZMYND11	HGNC	ENSG00000015171	tier1	-	-	39	0	0.00	47	4	7.84
ZMYND11	0	genome.wustl.edu	37	10	287978	287978	+	Silent	SNP	G	G	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	10	287978	287978	G	T	SNP	ZMYND11	ENST00000381591	human	ensembl	74_37	+1	known	silent	c.849	p.L283	1.000	pfam_PWWP_dom,smart_PWWP_dom,pfscan_PWWP_dom	pfam_PWWP_dom,pfam_Bromodomain,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Bromodomain,smart_PWWP_dom,pfscan_PWWP_dom,pfscan_Znf_MYND,pfscan_Znf_PHD-finger,pfscan_Bromodomain	-	no_errors	ZMYND11	HGNC	ENSG00000015171	tier1	-	-	52	0	0.00	47	4	7.84
ZNF358	0	genome.wustl.edu	37	19	7584255	7584255	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	19	7584255	7584255	C	T	SNP	ZNF358	ENST00000394341	human	ensembl	74_37	+1	known	missense	c.127	p.P43S	0.036	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF358	HGNC	ENSG00000198816				32	0	0.00	54	3	5.26
ZNF525	0	genome.wustl.edu	37	19	53887291	53887291	+	RNA	SNP	C	C	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	19	53887291	53887291	C	G	SNP	ZNF525	ENST00000601790	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.586	-	-	-	no_errors	ZNF525	HGNC	ENSG00000203326	tier1	-	-	15	0	0.00	17	12	41.38
ZNF525	0	genome.wustl.edu	37	19	53887291	53887291	+	RNA	SNP	C	C	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	19	53887291	53887291	C	G	SNP	ZNF525	ENST00000601790	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.586	-	-	-	no_errors	ZNF525	HGNC	ENSG00000203326	tier1	-	-	19	0	0.00	17	12	41.38
ZNF582	0	genome.wustl.edu	37	19	56895667	56895667	+	Silent	SNP	T	T	C			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	19	56895667	56895667	T	C	SNP	ZNF582	ENST00000301310	human	ensembl	74_37	-1	known	silent	c.1119	p.G373	0.002	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF582	HGNC	ENSG00000018869	tier1	-	-	26	0	0.00	27	12	30.77
ZNF582	0	genome.wustl.edu	37	19	56895667	56895667	+	Silent	SNP	T	T	C			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	19	56895667	56895667	T	C	SNP	ZNF582	ENST00000301310	human	ensembl	74_37	-1	known	silent	c.1119	p.G373	0.002	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF582	HGNC	ENSG00000018869	tier1	-	-	29	0	0.00	27	12	30.77
ZNF766	0	genome.wustl.edu	37	19	52793497	52793497	+	Silent	SNP	A	A	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	19	52793497	52793497	A	G	SNP	ZNF766	ENST00000359102	human	ensembl	74_37	+1	known	silent	c.498	p.R166	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF766	HGNC	ENSG00000196214	tier1	-	-	17	0	0.00	14	5	26.32
ZNF766	0	genome.wustl.edu	37	19	52793497	52793497	+	Silent	SNP	A	A	G			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	19	52793497	52793497	A	G	SNP	ZNF766	ENST00000359102	human	ensembl	74_37	+1	known	silent	c.498	p.R166	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF766	HGNC	ENSG00000196214	tier1	-	-	8	0	0.00	14	5	26.32
ZNF91	0	genome.wustl.edu	37	19	23542601	23542601	+	Missense_Mutation	SNP	T	T	C			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	19	23542601	23542601	T	C	SNP	ZNF91	ENST00000300619	human	ensembl	74_37	-1	known	missense	c.3180	p.I1060M	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF91	HGNC	ENSG00000167232	tier1	-	-	32	0	0.00	34	29	46.03
ZNF91	0	genome.wustl.edu	37	19	23542601	23542601	+	Missense_Mutation	SNP	T	T	C			TCGA-IG-A3I8-01A-11D-A247-09	TCGA-IG-A3I8-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	0ce0db90-1984-4605-9bb4-14e8d0f60458	f4d061b0-d3da-4573-9af1-b6b1e0b582d5	19	23542601	23542601	T	C	SNP	ZNF91	ENST00000300619	human	ensembl	74_37	-1	known	missense	c.3180	p.I1060M	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF91	HGNC	ENSG00000167232	tier1	-	-	45	0	0.00	34	29	46.03
