Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ABCB11	0	genome.wustl.edu	37	2	169870832	169870832	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	2	169870832	169870832	C	G	SNP	ABCB11	ENST00000263817	human	ensembl	74_37	-1	known	missense	c.131	p.R44T	0.163	superfamily_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB11	HGNC	ENSG00000073734	tier1	-	-	46	0	0.00	51	6	10.53
ABCG5	0	genome.wustl.edu	37	2	44065707	44065707	+	Silent	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	2	44065707	44065707	G	A	SNP	ABCG5	ENST00000260645	human	ensembl	74_37	-1	known	silent	c.112	p.L38	0.997	NULL	pfam_ABC_2_trans,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCG5	HGNC	ENSG00000138075	tier1	-	-	60	0	0.00	54	7	11.48
ACAN	0	genome.wustl.edu	37	15	89398787	89398787	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	15	89398787	89398787	G	A	SNP	ACAN	ENST00000439576	human	ensembl	74_37	+1	known	missense	c.2971	p.D991N	0.008	NULL	pfam_Link,pfam_C-type_lectin,pfam_Ig_V-set,pfam_Sushi_SCR_CCP,pfam_EG-like_dom,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Link,smart_EG-like_dom,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like_dom,prints_Link	-	no_errors	ACAN	HGNC	ENSG00000157766	tier1	-	-	26	0	0.00	26	7	21.21
ACAT2	0	genome.wustl.edu	37	6	160196340	160196340	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	6	160196340	160196340	G	A	SNP	ACAT2	ENST00000541436	human	ensembl	74_37	+1	known	missense	c.716	p.R239K	1.000	pfam_Thiolase_N,superfamily_Thiolase-like,pirsf_Thiolase,tigrfam_Thiolase	pfam_Thiolase_N,pfam_Thiolase_C,superfamily_Thiolase-like,pirsf_Thiolase,tigrfam_Thiolase	-	no_errors	ACAT2	HGNC	ENSG00000120437	tier1	-	-	47	0	0.00	61	8	11.59
ACPP	0	genome.wustl.edu	37	3	132086565	132086565	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	3	132086565	132086565	G	A	SNP	ACPP	ENST00000351273	human	ensembl	74_37	+1	known	missense	c.1156	p.A386T	0.451	NULL	pfam_His_Pase_superF_clade-2	-	no_errors	ACPP	HGNC	ENSG00000014257				44	0	0.00	62	4	6.06
ADAMTS15	0	genome.wustl.edu	37	11	130318901	130318901	+	Silent	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	11	130318901	130318901	C	T	SNP	ADAMTS15	ENST00000299164	human	ensembl	74_37	+1	known	silent	c.33	p.F11	0.004	NULL	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS,prints_Pept_M12B_ADAM-TS8	-	no_errors	ADAMTS15	HGNC	ENSG00000166106				20	0	0.00	47	3	6.00
ADCY7	0	genome.wustl.edu	37	16	50345982	50345982	+	Silent	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	16	50345982	50345982	G	A	SNP	ADCY7	ENST00000254235	human	ensembl	74_37	+1	known	silent	c.2484	p.K828	1.000	NULL	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY7	HGNC	ENSG00000121281	tier1	-	-	38	0	0.00	69	5	6.76
ADPGK	0	genome.wustl.edu	37	15	73048618	73048618	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	15	73048618	73048618	C	G	SNP	ADPGK	ENST00000311669	human	ensembl	74_37	-1	known	missense	c.814	p.E272Q	1.000	pfam_ADP_PFK/GK	pfam_ADP_PFK/GK	-	no_errors	ADPGK	HGNC	ENSG00000159322	tier1	-	-	53	0	0.00	81	18	18.18
AHDC1	0	genome.wustl.edu	37	1	27877849	27877849	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	27877849	27877849	C	G	SNP	AHDC1	ENST00000247087	human	ensembl	74_37	-1	known	missense	c.778	p.E260Q	0.996	NULL	NULL	-	no_errors	AHDC1	HGNC	ENSG00000126705	tier1	-	-	51	0	0.00	70	8	10.26
AHDC1	0	genome.wustl.edu	37	1	27878086	27878086	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	27878086	27878086	C	T	SNP	AHDC1	ENST00000247087	human	ensembl	74_37	-1	known	missense	c.541	p.E181K	0.992	NULL	NULL	-	no_errors	AHDC1	HGNC	ENSG00000126705				41	0	0.00	26	2	7.14
AIMP1	0	genome.wustl.edu	37	4	107246215	107246215	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	4	107246215	107246215	G	C	SNP	AIMP1	ENST00000394701	human	ensembl	74_37	+1	known	missense	c.121	p.E41Q	1.000	superfamily_t-SNARE	pfam_tRNA-bd_dom,superfamily_NA-bd_OB-fold,superfamily_t-SNARE,pfscan_tRNA-bd_dom	-	no_errors	AIMP1	HGNC	ENSG00000164022	tier1	-	-	30	0	0.00	24	6	19.35
AKAP8	0	genome.wustl.edu	37	19	15483682	15483682	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	19	15483682	15483682	G	A	SNP	AKAP8	ENST00000269701	human	ensembl	74_37	-1	known	missense	c.841	p.R281W	0.788	NULL	pfam_AKAP95	-	no_errors	AKAP8	HGNC	ENSG00000105127				30	0	0.00	37	3	7.50
AMOT	0	genome.wustl.edu	37	X	112058657	112058657	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	X	112058657	112058657	G	A	SNP	AMOT	ENST00000371959	human	ensembl	74_37	-1	known	missense	c.1321	p.L441F	1.000	superfamily_Prefoldin	pfam_Angiomotin_C,superfamily_Prefoldin,prints_Angiomotin	-	no_errors	AMOT	HGNC	ENSG00000126016	tier1	-	-	29	0	0.00	62	9	12.68
APLP2	0	genome.wustl.edu	37	11	130011951	130011951	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	11	130011951	130011951	C	G	SNP	APLP2	ENST00000263574	human	ensembl	74_37	+1	known	missense	c.2172	p.I724M	1.000	pfam_APP_amyloid_C	pfam_Amyloid_glyco_heparin-bd,pfam_APP_amyloid_C,pfam_Prot_inh_Kunz-m,superfamily_Amyloid_glyco_E2_domain,superfamily_Amyloid_glyco_heparin-bd,superfamily_Amyloid_glyco_Cu-bd,superfamily_Prot_inh_Kunz-m,smart_Amyloid_glyco_extra,smart_Prot_inh_Kunz-m,prints_Amyloid_glyco,prints_Prot_inh_Kunz-m,pfscan_Prot_inh_Kunz-m	-	no_errors	APLP2	HGNC	ENSG00000084234				21	0	0.00	51	4	7.27
ATP10B	0	genome.wustl.edu	37	5	160114974	160114974	+	Silent	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	5	160114974	160114974	C	G	SNP	ATP10B	ENST00000327245	human	ensembl	74_37	-1	known	silent	c.108	p.G36	0.000	NULL	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10B	HGNC	ENSG00000118322	tier1	-	-	37	0	0.00	70	5	6.67
ATP6V1D	0	genome.wustl.edu	37	14	67819642	67819642	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	14	67819642	67819642	C	G	SNP	ATP6V1D	ENST00000216442	human	ensembl	74_37	-1	known	missense	c.157	p.E53Q	1.000	pfam_V_ATPase_D,tigrfam_V_ATPase_D	pfam_V_ATPase_D,tigrfam_V_ATPase_D	-	no_errors	ATP6V1D	HGNC	ENSG00000100554	tier1	-	-	75	0	0.00	127	18	12.41
ATR	0	genome.wustl.edu	37	3	142224118	142224118	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	3	142224118	142224118	C	G	SNP	ATR	ENST00000350721	human	ensembl	74_37	-1	known	missense	c.5059	p.D1687H	1.000	pfscan_PIK_FAT	pfam_PI3/4_kinase_cat_dom,pfam_PIK-rel_kinase_FAT,pfam_UME,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_UME,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_HEAT_type_2,pfscan_PI3/4_kinase_cat_dom	-	no_errors	ATR	HGNC	ENSG00000175054	tier1	-	-	30	0	0.00	38	4	9.52
B3GALT4	0	genome.wustl.edu	37	6	33246327	33246327	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	6	33246327	33246327	G	C	SNP	B3GALT4	ENST00000451237	human	ensembl	74_37	+1	known	missense	c.1131	p.Q377H	0.054	NULL	pfam_Glyco_trans_31	-	no_errors	B3GALT4	HGNC	ENSG00000235863				41	0	0.00	40	3	6.98
BARX2	0	genome.wustl.edu	37	11	129306730	129306730	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	11	129306730	129306730	C	G	SNP	BARX2	ENST00000281437	human	ensembl	74_37	+1	known	missense	c.272	p.P91R	0.050	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	BARX2	HGNC	ENSG00000043039	tier1	-	-	51	0	0.00	53	5	8.62
BCAR1	0	genome.wustl.edu	37	16	75298373	75298373	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	16	75298373	75298373	G	C	SNP	BCAR1	ENST00000418647	human	ensembl	74_37	-1	known	missense	c.26	p.S9C	0.001	NULL	pfam_CAS_DUF3513,pfam_Serine_rich,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	BCAR1	HGNC	ENSG00000050820	tier1	-	-	25	0	0.00	56	9	13.85
BEND2	0	genome.wustl.edu	37	X	18221839	18221839	+	Missense_Mutation	SNP	A	A	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	X	18221839	18221839	A	C	SNP	BEND2	ENST00000380033	human	ensembl	74_37	-1	known	missense	c.689	p.F230C	0.000	NULL	pfam_BEN_domain	-	no_errors	BEND2	HGNC	ENSG00000177324	tier1	-	-	27	0	0.00	68	14	17.07
BEND3	0	genome.wustl.edu	37	6	107391610	107391610	+	Nonsense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	6	107391610	107391610	G	C	SNP	BEND3	ENST00000369042	human	ensembl	74_37	-1	known	nonsense	c.785	p.S262*	0.982	NULL	pfam_BEN_domain	-	no_errors	BEND3	HGNC	ENSG00000178409	tier1	-	-	47	0	0.00	74	9	10.84
BPGM	0	genome.wustl.edu	37	7	134346821	134346821	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	7	134346821	134346821	C	G	SNP	BPGM	ENST00000344924	human	ensembl	74_37	+1	known	missense	c.562	p.H188D	1.000	pfam_His_Pase_superF_clade-1,smart_His_Pase_superF_clade-1,tigrfam_Phosphogly_mut1	pfam_His_Pase_superF_clade-1,smart_His_Pase_superF_clade-1,tigrfam_Phosphogly_mut1	-	no_errors	BPGM	HGNC	ENSG00000172331	tier1	-	-	38	0	0.00	64	5	7.25
BRCA2	0	genome.wustl.edu	37	13	32954186	32954186	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	13	32954186	32954186	C	T	SNP	BRCA2	ENST00000380152	human	ensembl	74_37	+1	known	missense	c.9160	p.P3054S	0.000	pfam_BRCA2_OB_3,superfamily_NA-bd_OB-fold,pirsf_BRCA2	pfam_DNA_recomb/repair_BRCA2_hlx,pfam_BRCA2_repeat,pfam_BRCA2_OB_3,pfam_BRCA2_OB_1,pfam_Tower,superfamily_DNA_recomb/repair_BRCA2_hlx,superfamily_NA-bd_OB-fold,pirsf_BRCA2,pfscan_BRCA2_repeat	-	no_errors	BRCA2	HGNC	ENSG00000139618	tier1	-	-	69	0	0.00	80	5	5.88
BRD1	0	genome.wustl.edu	37	22	50217944	50217944	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	22	50217944	50217944	G	A	SNP	BRD1	ENST00000216267	human	ensembl	74_37	-1	known	missense	c.22	p.H8Y	1.000	NULL	pfam_Enhancer_polycomb-like_N,pfam_Bromodomain,pfam_PWWP_dom,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Bromodomain,smart_PWWP_dom,prints_Bromodomain,pfscan_PWWP_dom,pfscan_Znf_PHD-finger,pfscan_Bromodomain	-	no_errors	BRD1	HGNC	ENSG00000100425	tier1	-	-	11	0	0.00	28	14	33.33
BRD9	0	genome.wustl.edu	37	5	876276	876276	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	5	876276	876276	G	T	SNP	BRD9	ENST00000467963	human	ensembl	74_37	-1	known	missense	c.1323	p.D441E	0.804	pfam_DUF3512	pfam_DUF3512,pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD9	HGNC	ENSG00000028310				23	0	0.00	22	2	8.33
BRWD3	0	genome.wustl.edu	37	X	80001094	80001094	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	X	80001094	80001094	C	G	SNP	BRWD3	ENST00000373275	human	ensembl	74_37	-1	known	missense	c.565	p.D189H	1.000	pfam_WD40_repeat,superfamily_Quino_amine_DH_bsu,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_Bromodomain,superfamily_Quino_amine_DH_bsu,superfamily_Bromodomain,smart_WD40_repeat,smart_Bromodomain,pfscan_Bromodomain,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Bromodomain	-	no_errors	BRWD3	HGNC	ENSG00000165288	tier1	-	-	35	0	0.00	40	9	18.37
BTBD6	0	genome.wustl.edu	37	14	105716690	105716690	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	14	105716690	105716690	C	A	SNP	BTBD6	ENST00000392554	human	ensembl	74_37	+1	known	missense	c.1139	p.S380Y	0.996	pfam_PHR	pfam_PHR,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,pfscan_BTB/POZ-like	-	no_errors	BTBD6	HGNC	ENSG00000184887	tier1	-	-	20	0	0.00	15	4	21.05
C17orf104	0	genome.wustl.edu	37	17	42743838	42743838	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	17	42743838	42743838	G	A	SNP	C17orf104	ENST00000409122	human	ensembl	74_37	+1	known	missense	c.559	p.D187N	1.000	NULL	NULL	-	no_errors	C17orf104	HGNC	ENSG00000180336				23	0	0.00	40	4	9.09
C17orf77	0	genome.wustl.edu	37	17	72588749	72588749	+	Silent	SNP	T	T	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	17	72588749	72588749	T	A	SNP	C17orf77	ENST00000328023	human	ensembl	74_37	+1	known	silent	c.564	p.T188	0.000	NULL	NULL	-	no_errors	C17orf77	HGNC	ENSG00000182352	tier1	-	-	33	0	0.00	42	7	14.29
C17orf78	0	genome.wustl.edu	37	17	35746184	35746184	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	17	35746184	35746184	C	T	SNP	C17orf78	ENST00000300618	human	ensembl	74_37	+1	known	nonsense	c.637	p.Q213*	0.076	NULL	NULL	-	no_errors	C17orf78	HGNC	ENSG00000167230	tier1	-	-	34	0	0.00	43	12	21.82
C3orf55	0	genome.wustl.edu	37	3	157289013	157289013	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	3	157289013	157289013	C	G	SNP	C3orf55	ENST00000449199	human	ensembl	74_37	+1	known	missense	c.131	p.S44C	0.173	NULL	NULL	-	no_errors	C3orf55	HGNC	ENSG00000174899	tier1	-	-	102	0	0.00	115	21	15.44
C7orf72	0	genome.wustl.edu	37	7	50198667	50198667	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	7	50198667	50198667	G	T	SNP	C7orf72	ENST00000297001	human	ensembl	74_37	+1	known	missense	c.1219	p.D407Y	0.038	NULL	NULL	-	no_errors	C7orf72	HGNC	ENSG00000164500	tier1	-	-	54	0	0.00	60	39	39.39
C8orf34	0	genome.wustl.edu	37	8	69434053	69434053	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	8	69434053	69434053	C	T	SNP	C8orf34	ENST00000518698	human	ensembl	74_37	+1	known	missense	c.785	p.S262F	1.000	NULL	superfamily_cAMP_dep_PK_reg_su_I/II_a/b	-	no_errors	C8orf34	HGNC	ENSG00000165084	tier1	rs150489120	-	37	0	0.00	69	5	6.76
C9	0	genome.wustl.edu	37	5	39341298	39341298	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	5	39341298	39341298	G	T	SNP	C9	ENST00000263408	human	ensembl	74_37	-1	known	nonsense	c.426	p.C142*	1.000	superfamily_LDrepeatLR_classA_rpt	pfam_MACPF,pfam_LDrepeatLR_classA_rpt,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,superfamily_LDrepeatLR_classA_rpt,smart_Thrombospondin_1_rpt,smart_LDrepeatLR_classA_rpt,smart_MACPF,prints_MAC_perforin,pfscan_LDrepeatLR_classA_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	C9	HGNC	ENSG00000113600				17	0	0.00	34	4	10.53
CACNA1A	0	genome.wustl.edu	37	19	13397432	13397432	+	Silent	SNP	G	G	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	19	13397432	13397432	G	T	SNP	CACNA1A	ENST00000360228	human	ensembl	74_37	-1	known	silent	c.3438	p.V1146	1.000	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_P/Q_a1su	-	no_errors	CACNA1A	HGNC	ENSG00000141837	tier1	-	-	28	0	0.00	28	5	15.15
CAND1	0	genome.wustl.edu	37	12	67691219	67691219	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	12	67691219	67691219	C	T	SNP	CAND1	ENST00000545606	human	ensembl	74_37	+1	known	missense	c.524	p.S175L	1.000	superfamily_ARM-type_fold	pfam_TATA-bd_TIP120,pfam_HEAT,superfamily_ARM-type_fold	-	no_errors	CAND1	HGNC	ENSG00000111530	tier1	-	-	38	0	0.00	85	5	5.56
CCDC50	0	genome.wustl.edu	37	3	191087747	191087747	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	3	191087747	191087747	G	C	SNP	CCDC50	ENST00000392456	human	ensembl	74_37	+1	known	missense	c.370	p.E124Q	1.000	NULL	NULL	-	no_errors	CCDC50	HGNC	ENSG00000152492	tier1	-	-	57	0	0.00	96	6	5.88
CCDC88A	0	genome.wustl.edu	37	2	55544775	55544775	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	2	55544775	55544775	G	C	SNP	CCDC88A	ENST00000436346	human	ensembl	74_37	-1	known	missense	c.3527	p.S1176C	1.000	NULL	pfam_Hook-related_fam,superfamily_Prefoldin,superfamily_t-SNARE	-	no_errors	CCDC88A	HGNC	ENSG00000115355				31	0	0.00	27	3	10.00
CCIN	0	genome.wustl.edu	37	9	36169685	36169685	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	9	36169685	36169685	G	T	SNP	CCIN	ENST00000335119	human	ensembl	74_37	+1	known	missense	c.186	p.M62I	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pfscan_BTB/POZ-like	-	no_errors	CCIN	HGNC	ENSG00000185972	tier1	-	-	24	0	0.00	38	5	11.63
CD55	0	genome.wustl.edu	37	1	207499005	207499005	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	207499005	207499005	C	G	SNP	CD55	ENST00000314754	human	ensembl	74_37	+1	known	missense	c.517	p.Q173E	0.043	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CD55	HGNC	ENSG00000196352	tier1	-	-	48	0	0.00	96	8	7.69
CDC37L1	0	genome.wustl.edu	37	9	4697838	4697838	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	9	4697838	4697838	G	C	SNP	CDC37L1	ENST00000381854	human	ensembl	74_37	+1	known	missense	c.706	p.D236H	1.000	pfam_Cdc37_Hsp90-bd	pfam_Cdc37_Hsp90-bd	-	no_errors	CDC37L1	HGNC	ENSG00000106993	tier1	-	-	70	0	0.00	88	13	12.75
CDH18	0	genome.wustl.edu	37	5	19473394	19473394	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	5	19473394	19473394	G	T	SNP	CDH18	ENST00000274170	human	ensembl	74_37	-1	known	missense	c.2314	p.P772T	1.000	pfam_Cadherin_cytoplasmic-dom	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH18	HGNC	ENSG00000145526	tier1	-	-	50	0	0.00	58	21	26.58
CDH23	0	genome.wustl.edu	37	10	73499506	73499506	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	10	73499506	73499506	G	C	SNP	CDH23	ENST00000224721	human	ensembl	74_37	+1	putative	missense	c.4480	p.E1494Q	0.990	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH23	HGNC	ENSG00000107736	tier1	-	-	44	0	0.00	54	9	14.29
CDK10	0	genome.wustl.edu	37	16	89755673	89755673	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	16	89755673	89755673	G	A	SNP	CDK10	ENST00000353379	human	ensembl	74_37	+1	known	missense	c.101	p.R34Q	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK10	HGNC	ENSG00000185324	tier1	-	-	63	0	0.00	111	7	5.93
CDKN1A	0	genome.wustl.edu	37	6	36652282	36652282	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	6	36652282	36652282	G	C	SNP	CDKN1A	ENST00000448526	human	ensembl	74_37	+1	known	missense	c.506	p.G169A	0.197	NULL	pfam_CDI	-	no_errors	CDKN1A	HGNC	ENSG00000124762				26	0	0.00	41	3	6.82
CEP290	0	genome.wustl.edu	37	12	88481593	88481593	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	12	88481593	88481593	G	C	SNP	CEP290	ENST00000309041	human	ensembl	74_37	-1	known	missense	c.4164	p.I1388M	1.000	NULL	NULL	-	no_errors	CEP290	HGNC	ENSG00000198707	tier1	-	-	48	0	0.00	51	9	15.00
CFHR4	0	genome.wustl.edu	37	1	196876605	196876605	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	196876605	196876605	G	T	SNP	CFHR4	ENST00000367416	human	ensembl	74_37	+1	known	missense	c.773	p.W258L	0.984	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CFHR4	HGNC	ENSG00000134365				22	0	0.00	45	5	10.00
CHAF1B	0	genome.wustl.edu	37	21	37775142	37775142	+	Silent	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	21	37775142	37775142	C	T	SNP	CHAF1B	ENST00000314103	human	ensembl	74_37	+1	known	silent	c.750	p.L250	0.978	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Gprotein_B	-	no_errors	CHAF1B	HGNC	ENSG00000159259	tier1	-	-	53	0	0.00	74	9	10.84
CHGB	0	genome.wustl.edu	37	20	5904375	5904375	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	20	5904375	5904375	C	G	SNP	CHGB	ENST00000378961	human	ensembl	74_37	+1	known	missense	c.1585	p.L529V	0.000	pfam_Granin	pfam_Granin,prints_Chromogranin_AB	-	no_errors	CHGB	HGNC	ENSG00000089199	tier1	-	-	14	0	0.00	16	7	30.43
CHML	0	genome.wustl.edu	37	1	241798714	241798714	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	241798714	241798714	G	C	SNP	CHML	ENST00000366553	human	ensembl	74_37	-1	known	missense	c.355	p.L119V	0.093	pirsf_Rab_geranylTrfase_A_euk,prints_Rab_escort	pfam_GDP_dissociation_inhibitor,pirsf_Rab_geranylTrfase_A_euk,prints_Rab_escort,prints_GDP_dissociation_inhibitor	-	no_errors	CHML	HGNC	ENSG00000203668	tier1	-	-	19	0	0.00	25	5	16.67
CHST12	0	genome.wustl.edu	37	7	2472467	2472467	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	7	2472467	2472467	G	A	SNP	CHST12	ENST00000258711	human	ensembl	74_37	+1	known	missense	c.193	p.D65N	0.001	NULL	pfam_Sulfotransferase,superfamily_P-loop_NTPase	-	no_errors	CHST12	HGNC	ENSG00000136213	tier1	-	-	65	0	0.00	130	12	8.45
CLPTM1	0	genome.wustl.edu	37	19	45476365	45476365	+	Silent	SNP	C	C	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	19	45476365	45476365	C	A	SNP	CLPTM1	ENST00000337392	human	ensembl	74_37	+1	known	silent	c.207	p.I69	1.000	pfam_CLPTM1	pfam_CLPTM1	-	no_errors	CLPTM1	HGNC	ENSG00000104853	tier1	-	-	36	0	0.00	41	10	19.61
CLTCL1	0	genome.wustl.edu	37	22	19241719	19241719	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	22	19241719	19241719	C	G	SNP	CLTCL1	ENST00000263200	human	ensembl	74_37	-1	known	missense	c.282	p.E94D	1.000	superfamily_Clathrin_H-chain_propeller_N,pirsf_Clathrin_heavy_chain	pfam_Clathrin_H-chain/VPS_repeat,pfam_Clathrin_H-chain_propeller_rpt,pfam_Clathrin_H-chain_linker_core,superfamily_Clathrin_H-chain_propeller_N,superfamily_ARM-type_fold,smart_Clathrin_H-chain/VPS_repeat,pirsf_Clathrin_heavy_chain	-	no_errors	CLTCL1	HGNC	ENSG00000070371	tier1	-	-	39	0	0.00	60	11	15.49
COBLL1	0	genome.wustl.edu	37	2	165561596	165561596	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	2	165561596	165561596	C	G	SNP	COBLL1	ENST00000194871	human	ensembl	74_37	-1	known	missense	c.1214	p.R405T	0.001	pfam_Cordon-bleu_ubiquitin_domain	pfam_Cordon-bleu_ubiquitin_domain,pfscan_WH2_dom	-	no_errors	COBLL1	HGNC	ENSG00000082438	tier1	-	-	24	0	0.00	45	8	15.09
COL4A4	0	genome.wustl.edu	37	2	227896937	227896937	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	2	227896937	227896937	C	G	SNP	COL4A4	ENST00000396625	human	ensembl	74_37	-1	known	missense	c.3633	p.E1211D	0.734	pfam_Collagen	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A4	HGNC	ENSG00000081052				22	0	0.00	29	4	12.12
COL4A6	0	genome.wustl.edu	37	X	107400267	107400267	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	X	107400267	107400267	C	T	SNP	COL4A6	ENST00000372216	human	ensembl	74_37	-1	known	missense	c.5039	p.R1680Q	0.967	pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A6	HGNC	ENSG00000197565	tier1	-	-	19	0	0.00	29	11	27.50
COPA	0	genome.wustl.edu	37	1	160268910	160268910	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	160268910	160268910	G	C	SNP	COPA	ENST00000368069	human	ensembl	74_37	-1	known	missense	c.1839	p.I613M	1.000	pfam_Coatomer_WD-assoc_reg,pirsf_Coatomer_asu	pfam_Coatomer_asu_C,pfam_Coatomer_WD-assoc_reg,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_Coatomer_asu,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	COPA	HGNC	ENSG00000122218	tier1	-	-	45	0	0.00	84	5	5.62
COPA	0	genome.wustl.edu	37	1	160276271	160276271	+	Missense_Mutation	SNP	T	T	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	160276271	160276271	T	A	SNP	COPA	ENST00000368069	human	ensembl	74_37	-1	known	missense	c.1315	p.N439Y	1.000	pfam_Coatomer_WD-assoc_reg,pirsf_Coatomer_asu	pfam_Coatomer_asu_C,pfam_Coatomer_WD-assoc_reg,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_Coatomer_asu,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	COPA	HGNC	ENSG00000122218				28	0	0.00	42	3	6.67
CRCP	0	genome.wustl.edu	37	7	65617257	65617257	+	Silent	SNP	C	C	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	7	65617257	65617257	C	A	SNP	CRCP	ENST00000395326	human	ensembl	74_37	+1	known	silent	c.360	p.V120	0.998	pfam_RNA_pol_II_Rpb4,superfamily_HRDC-like,smart_RNA_pol_II_Rpb4_core	pfam_RNA_pol_II_Rpb4,superfamily_HRDC-like,smart_RNA_pol_II_Rpb4_core	-	no_errors	CRCP	HGNC	ENSG00000241258				23	0	0.00	31	4	11.43
CRCP	0	genome.wustl.edu	37	7	65617267	65617267	+	Silent	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	7	65617267	65617267	C	T	SNP	CRCP	ENST00000395326	human	ensembl	74_37	+1	known	silent	c.370	p.L124	1.000	superfamily_HRDC-like,smart_RNA_pol_II_Rpb4_core	pfam_RNA_pol_II_Rpb4,superfamily_HRDC-like,smart_RNA_pol_II_Rpb4_core	-	no_errors	CRCP	HGNC	ENSG00000241258				22	0	0.00	32	3	8.57
CSF2RB	0	genome.wustl.edu	37	22	37326490	37326490	+	Silent	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	22	37326490	37326490	G	A	SNP	CSF2RB	ENST00000262825	human	ensembl	74_37	+1	known	silent	c.792	p.V264	0.994	pirsf_IL3_rcpt_beta,pfam_IL-6_rcpt_alpha-bd,superfamily_Fibronectin_type3	pirsf_IL3_rcpt_beta,pfam_Fibronectin_type3,pfam_IL-6_rcpt_alpha-bd,pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	CSF2RB	HGNC	ENSG00000100368	tier1	-	-	51	0	0.00	61	18	22.78
CSMD1	0	genome.wustl.edu	37	8	3889611	3889611	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	8	3889611	3889611	G	T	SNP	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	missense	c.426	p.S142R	0.979	NULL	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117				21	0	0.00	21	5	19.23
CXCL1	0	genome.wustl.edu	37	4	74735691	74735691	+	Missense_Mutation	SNP	A	A	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	4	74735691	74735691	A	G	SNP	CXCL1	ENST00000395761	human	ensembl	74_37	+1	known	missense	c.293	p.E98G	0.003	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom,prints_Chemokine_CXC	-	no_errors	CXCL1	HGNC	ENSG00000163739				28	0	0.00	37	2	5.13
CYB5R2	0	genome.wustl.edu	37	11	7690913	7690913	+	Silent	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	11	7690913	7690913	C	T	SNP	CYB5R2	ENST00000299498	human	ensembl	74_37	-1	known	silent	c.201	p.R67	0.981	pfam_OxRdtase_FAD-bd_dom,superfamily_Riboflavin_synthase-like_b-brl,prints_NADH-Cyt_B5_reductase,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase	pfam_OxRdtase_FAD-bd_dom,pfam_OxRdtase_FAD/NAD-bd,superfamily_Riboflavin_synthase-like_b-brl,prints_NADH-Cyt_B5_reductase,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase	-	no_errors	CYB5R2	HGNC	ENSG00000166394	tier1	-	-	49	0	0.00	74	4	5.13
DBX2	0	genome.wustl.edu	37	12	45410229	45410229	+	Nonsense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	12	45410229	45410229	G	C	SNP	DBX2	ENST00000332700	human	ensembl	74_37	-1	known	nonsense	c.860	p.S287*	0.672	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	DBX2	HGNC	ENSG00000185610	tier1	-	-	60	0	0.00	70	12	14.63
DCC	0	genome.wustl.edu	37	18	50976874	50976874	+	Silent	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	18	50976874	50976874	G	A	SNP	DCC	ENST00000442544	human	ensembl	74_37	+1	known	silent	c.3234	p.P1078	0.974	pfam_Neogenin_C	pfam_Neogenin_C,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DCC	HGNC	ENSG00000187323	tier1	-	-	65	0	0.00	92	19	17.12
DCLK1	0	genome.wustl.edu	37	13	36362275	36362275	+	RNA	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	13	36362275	36362275	G	A	SNP	DCLK1	ENST00000477664	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	DCLK1	HGNC	ENSG00000133083	tier1	-	-	63	0	0.00	87	10	10.31
DDX19A	0	genome.wustl.edu	37	16	70390094	70390094	+	Silent	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	16	70390094	70390094	G	A	SNP	DDX19A	ENST00000302243	human	ensembl	74_37	+1	known	silent	c.237	p.L79	1.000	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX19A	HGNC	ENSG00000168872	tier1	-	-	47	0	0.00	67	4	5.63
DDX39A	0	genome.wustl.edu	37	19	14522410	14522410	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	19	14522410	14522410	C	A	SNP	DDX39A	ENST00000242776	human	ensembl	74_37	-1	known	missense	c.337	p.V113L	1.000	pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX39A	HGNC	ENSG00000123136	tier1	-	-	76	0	0.00	91	8	8.08
DDX3X	0	genome.wustl.edu	37	X	41206955	41206955	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	X	41206955	41206955	G	C	SNP	DDX3X	ENST00000399959	human	ensembl	74_37	+1	known	missense	c.1972	p.D658H	1.000	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX3X	HGNC	ENSG00000215301	tier1	-	-	16	0	0.00	15	6	28.57
DEFB129	0	genome.wustl.edu	37	20	210168	210168	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	20	210168	210168	C	A	SNP	DEFB129	ENST00000246105	human	ensembl	74_37	+1	known	missense	c.308	p.P103H	0.000	NULL	NULL	-	no_errors	DEFB129	HGNC	ENSG00000125903				22	0	0.00	38	2	5.00
DHTKD1	0	genome.wustl.edu	37	10	12126748	12126748	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	10	12126748	12126748	C	G	SNP	DHTKD1	ENST00000263035	human	ensembl	74_37	+1	known	missense	c.520	p.Q174E	1.000	pirsf_2oxoglutarate_DH_E1,tigrfam_2oxoglutarate_DH_E1	pfam_Transketolase-like_Pyr-bd,pfam_DH_E1,smart_Transketolase-like_Pyr-bd,pirsf_2oxoglutarate_DH_E1,tigrfam_2oxoglutarate_DH_E1	-	no_errors	DHTKD1	HGNC	ENSG00000181192	tier1	-	-	38	0	0.00	46	4	8.00
DIAPH2	0	genome.wustl.edu	37	X	96502803	96502803	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	X	96502803	96502803	G	C	SNP	DIAPH2	ENST00000324765	human	ensembl	74_37	+1	known	missense	c.2809	p.E937Q	0.957	pfam_FH2_Formin,smart_FH2_Formin	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,pfam_Drf_DAD,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	DIAPH2	HGNC	ENSG00000147202	tier1	-	-	53	0	0.00	68	15	18.07
DIDO1	0	genome.wustl.edu	37	20	61510742	61510742	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	20	61510742	61510742	C	T	SNP	DIDO1	ENST00000266070	human	ensembl	74_37	-1	known	missense	c.6566	p.R2189Q	0.781	NULL	pfam_TFIIS_cen_dom,pfam_SPOC_C,pfam_Znf_PHD-finger,superfamily_TFIIS_cen_dom,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_TFS2M,pfscan_Znf_PHD-finger	-	no_errors	DIDO1	HGNC	ENSG00000101191	tier1	-	-	70	0	0.00	91	9	9.00
DNAAF1	0	genome.wustl.edu	37	16	84199429	84199429	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	16	84199429	84199429	G	A	SNP	DNAAF1	ENST00000378553	human	ensembl	74_37	+1	known	missense	c.904	p.E302K	1.000	NULL	NULL	-	no_errors	DNAAF1	HGNC	ENSG00000154099	tier1	-	-	48	0	0.00	44	10	18.52
DNAH12	0	genome.wustl.edu	37	3	57399535	57399535	+	Silent	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	3	57399535	57399535	C	T	SNP	DNAH12	ENST00000351747	human	ensembl	74_37	-1	known	silent	c.5901	p.L1967	1.000	pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH12	HGNC	ENSG00000174844				24	0	0.00	23	3	11.54
DNAH14	0	genome.wustl.edu	37	1	225576110	225576110	+	Silent	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	225576110	225576110	G	A	SNP	DNAH14	ENST00000430092	human	ensembl	74_37	+1	known	silent	c.12801	p.L4267	0.199	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,superfamily_P-loop_NTPase,superfamily_Tautomerase/MIF_sf,smart_AAA+_ATPase	-	no_errors	DNAH14	HGNC	ENSG00000185842	tier1	-	-	38	0	0.00	74	10	11.63
DNAH17	0	genome.wustl.edu	37	17	76423160	76423160	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	17	76423160	76423160	C	G	SNP	DNAH17	ENST00000389840	human	ensembl	74_37	-1	known	missense	c.12687	p.E4229D	1.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_HR1_rho-bd	-	no_errors	DNAH17	HGNC	ENSG00000187775	tier1	-	-	29	0	0.00	42	9	17.65
DNAH7	0	genome.wustl.edu	37	2	196912149	196912149	+	Missense_Mutation	SNP	T	T	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	2	196912149	196912149	T	C	SNP	DNAH7	ENST00000312428	human	ensembl	74_37	-1	known	missense	c.325	p.T109A	0.846	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,superfamily_P-loop_NTPase,superfamily_Signal_recog_particle_SRP9/14,smart_AAA+_ATPase,pfscan_EF_hand_dom	-	no_errors	DNAH7	HGNC	ENSG00000118997	tier1	-	-	52	0	0.00	72	13	15.29
DOCK9	0	genome.wustl.edu	37	13	99538803	99538803	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	13	99538803	99538803	G	C	SNP	DOCK9	ENST00000339416	human	ensembl	74_37	-1	known	missense	c.2122	p.P708A	1.000	NULL	pfam_DOCK_C,pfam_DOCK_C/D_N,pfam_Pleckstrin_homology,superfamily_ARM-type_fold,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	DOCK9	HGNC	ENSG00000088387	tier1	-	-	26	0	0.00	24	5	17.24
DSCAML1	0	genome.wustl.edu	37	11	117302357	117302357	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	11	117302357	117302357	G	C	SNP	DSCAML1	ENST00000321322	human	ensembl	74_37	-1	known	missense	c.5447	p.S1816C	1.000	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DSCAML1	HGNC	ENSG00000177103	tier1	-	-	58	0	0.00	61	8	11.43
DST	0	genome.wustl.edu	37	6	56324949	56324949	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	6	56324949	56324949	C	G	SNP	DST	ENST00000370754	human	ensembl	74_37	-1	known	missense	c.22970	p.R7657T	0.995	NULL	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	DST	HGNC	ENSG00000151914	tier1	-	-	40	0	0.00	39	6	13.33
DYNC1H1	0	genome.wustl.edu	37	14	102499768	102499768	+	Silent	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	14	102499768	102499768	C	T	SNP	DYNC1H1	ENST00000360184	human	ensembl	74_37	+1	known	silent	c.10360	p.L3454	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_Thioredoxin-like_fold,superfamily_Glutathione-S-Trfase_C-like,smart_AAA+_ATPase	-	no_errors	DYNC1H1	HGNC	ENSG00000197102	tier1	-	-	27	0	0.00	27	6	18.18
ELFN2	0	genome.wustl.edu	37	22	37770925	37770925	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	22	37770925	37770925	G	A	SNP	ELFN2	ENST00000402918	human	ensembl	74_37	-1	known	missense	c.650	p.S217L	1.000	NULL	superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,pfscan_LPXTG_anchor	-	no_errors	ELFN2	HGNC	ENSG00000166897	tier1	-	-	126	0	0.00	169	30	15.08
EME1	0	genome.wustl.edu	37	17	48452978	48452978	+	Missense_Mutation	SNP	A	A	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	17	48452978	48452978	A	C	SNP	EME1	ENST00000393271	human	ensembl	74_37	+1	known	missense	c.409	p.K137Q	0.140	NULL	pfam_ERCC4_domain,smart_ERCC4_domain	-	no_errors	EME1	HGNC	ENSG00000154920				36	0	0.00	49	5	9.26
ENSG00000161103	0	genome.wustl.edu	37	22	18839191	18839191	+	RNA	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	22	18839191	18839191	C	T	SNP	ENSG00000161103	ENST00000412938	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.057	-	-	-	no_errors	AC008132.13	Clone_based_vega_gene	ENSG00000161103	tier1	-	-	9	0	0.00	7	7	50.00
ENSG00000214915	0	genome.wustl.edu	37	X	150684403	150684403	+	RNA	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	X	150684403	150684403	G	C	SNP	ENSG00000214915	ENST00000454307	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	XX-FW80269A6.1	Clone_based_vega_gene	ENSG00000214915	tier1	-	-	50	0	0.00	76	7	8.43
ENSG00000224631	0	genome.wustl.edu	37	16	61089574	61089574	+	RNA	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	16	61089574	61089574	C	T	SNP	ENSG00000224631	ENST00000591758	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-51O6.1	Clone_based_vega_gene	ENSG00000224631	tier1	-	-	22	0	0.00	37	8	17.78
ENSG00000247228	0	genome.wustl.edu	37	16	70190311	70190311	+	RNA	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	16	70190311	70190311	C	T	SNP	ENSG00000247228	ENST00000566989	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-296I10.3	Clone_based_vega_gene	ENSG00000247228	tier1	-	-	56	0	0.00	72	6	7.69
ENSG00000257761	0	genome.wustl.edu	37	12	71976149	71976149	+	RNA	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	12	71976149	71976149	C	T	SNP	ENSG00000257761	ENST00000546601	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-186F10.2	Clone_based_vega_gene	ENSG00000257761	tier1	-	-	18	0	0.00	27	5	15.62
ENSG00000260772	0	genome.wustl.edu	37	16	69737362	69737362	+	RNA	SNP	G	G	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	16	69737362	69737362	G	T	SNP	ENSG00000260772	ENST00000561622	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.072	-	-	-	no_errors	RP11-311C24.1	Clone_based_vega_gene	ENSG00000260772	tier1	-	-	75	0	0.00	75	35	31.82
ENSG00000268412	0	genome.wustl.edu	37	2	26251217	26251217	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	2	26251217	26251217	C	G	SNP	ENSG00000268412	ENST00000599234	human	ensembl	74_37	-1	novel	missense	c.265	p.E89Q	0.003	pfam_UPF0434/Trm112	pfam_UPF0434/Trm112	-	no_errors	AC013449.1	Clone_based_ensembl_gene	ENSG00000268412	tier1	-	-	53	0	0.00	33	5	13.16
ENSG00000273398	0	genome.wustl.edu	37	2	68384711	68384711	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	2	68384711	68384711	G	C	SNP	ENSG00000273398	ENST00000406334	human	ensembl	74_37	-1	known	missense	c.878	p.A293G	0.000	NULL	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	RP11-474G23.1	Clone_based_vega_gene	ENSG00000273398	tier1	-	-	61	0	0.00	76	5	6.17
EPHA3	0	genome.wustl.edu	37	3	89445061	89445061	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	3	89445061	89445061	G	A	SNP	EPHA3	ENST00000336596	human	ensembl	74_37	+1	known	missense	c.1381	p.E461K	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_2,pfam_SAM_type1,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA3	HGNC	ENSG00000044524				26	0	0.00	39	3	7.14
EPM2AIP1	0	genome.wustl.edu	37	3	37033360	37033360	+	Silent	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	3	37033360	37033360	G	C	SNP	EPM2AIP1	ENST00000322716	human	ensembl	74_37	-1	known	silent	c.1209	p.V403	0.109	NULL	NULL	-	no_errors	EPM2AIP1	HGNC	ENSG00000178567				23	0	0.00	30	3	9.09
EVA1C	0	genome.wustl.edu	37	21	33887364	33887364	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	21	33887364	33887364	C	T	SNP	EVA1C	ENST00000300255	human	ensembl	74_37	+1	known	missense	c.1190	p.S397L	0.982	NULL	pfam_Lectin_gal-bd_dom,pfscan_Lectin_gal-bd_dom	-	no_errors	EVA1C	HGNC	ENSG00000166979				22	0	0.00	19	3	13.64
FAM208B	0	genome.wustl.edu	37	10	5784127	5784127	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	10	5784127	5784127	C	G	SNP	FAM208B	ENST00000328090	human	ensembl	74_37	+1	known	missense	c.2395	p.L799V	1.000	NULL	pfam_DUF3715,pfam_DUF3699	-	no_errors	FAM208B	HGNC	ENSG00000108021	tier1	-	-	41	0	0.00	54	4	6.90
FAM71A	0	genome.wustl.edu	37	1	212798703	212798703	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	212798703	212798703	G	A	SNP	FAM71A	ENST00000294829	human	ensembl	74_37	+1	known	missense	c.484	p.D162N	0.965	pfam_DUF3699	pfam_DUF3699	-	no_errors	FAM71A	HGNC	ENSG00000162771	tier1	-	-	28	0	0.00	58	5	7.94
FAM71C	0	genome.wustl.edu	37	12	100043170	100043170	+	Silent	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	12	100043170	100043170	G	A	SNP	FAM71C	ENST00000324341	human	ensembl	74_37	+1	known	silent	c.720	p.E240	0.006	NULL	pfam_DUF3699	-	no_errors	FAM71C	HGNC	ENSG00000180219	tier1	-	-	30	0	0.00	51	7	12.07
FAM71D	0	genome.wustl.edu	37	14	67669818	67669818	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	14	67669818	67669818	G	C	SNP	FAM71D	ENST00000311864	human	ensembl	74_37	+1	known	missense	c.167	p.R56T	0.999	NULL	pfam_DUF3699	-	no_errors	FAM71D	HGNC	ENSG00000172717	tier1	-	-	55	0	0.00	58	8	12.12
FAM9B	0	genome.wustl.edu	37	X	8997386	8997386	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	X	8997386	8997386	C	G	SNP	FAM9B	ENST00000327220	human	ensembl	74_37	-1	known	missense	c.355	p.E119Q	0.002	pfam_Cor1/Xlr/Xmr	pfam_Cor1/Xlr/Xmr	-	no_errors	FAM9B	HGNC	ENSG00000177138	tier1	-	-	43	0	0.00	65	10	13.33
FOXI3	0	genome.wustl.edu	37	2	88748296	88748296	+	RNA	SNP	A	A	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	2	88748296	88748296	A	G	SNP	FOXI3	ENST00000398142	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.392	-	-	-	no_errors	FOXI3	HGNC	ENSG00000214336	tier1	-	-	26	0	0.00	33	5	13.16
FPGT	0	genome.wustl.edu	37	1	74670407	74670407	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	74670407	74670407	C	T	SNP	FPGT	ENST00000370898	human	ensembl	74_37	+1	known	missense	c.715	p.R239C	1.000	pfam_Fucokinase,pirsf_Fucose-1-phosphate_GuaTrfase	pfam_Fucokinase,superfamily_Trimer_LpxA-like,pirsf_Fucose-1-phosphate_GuaTrfase	-	no_errors	FPGT	HGNC	ENSG00000254685				19	0	0.00	25	2	7.41
FRMD6	0	genome.wustl.edu	37	14	52187044	52187044	+	Silent	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	14	52187044	52187044	C	T	SNP	FRMD6	ENST00000344768	human	ensembl	74_37	+1	known	silent	c.1296	p.S432	1.000	NULL	pfam_FERM_central,pfam_FERM_PH-like_C,pfam_FERM_N,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain	-	no_errors	FRMD6	HGNC	ENSG00000139926	tier1	-	-	30	0	0.00	40	8	16.67
FUCA2	0	genome.wustl.edu	37	6	143825347	143825347	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	6	143825347	143825347	G	T	SNP	FUCA2	ENST00000002165	human	ensembl	74_37	-1	known	missense	c.455	p.A152D	0.966	pfam_Glyco_hydro_29,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_29,pirsf_Glyco_hydro_29_sub	pfam_Glyco_hydro_29,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_29,pirsf_Glyco_hydro_29_sub,prints_Glyco_hydro_29_sub	-	no_errors	FUCA2	HGNC	ENSG00000001036				18	0	0.00	33	2	5.71
FUK	0	genome.wustl.edu	37	16	70513177	70513177	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	16	70513177	70513177	G	C	SNP	FUK	ENST00000378912	human	ensembl	74_37	+1	known	missense	c.3042	p.M1014I	1.000	pfam_GHMP_kinase_C_dom	pfam_Fucokinase,pfam_GHMP_kinase_C_dom,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_Trimer_LpxA-like,prints_Galkinase	-	no_errors	FUK	HGNC	ENSG00000157353				47	0	0.00	70	6	7.89
GCN1L1	0	genome.wustl.edu	37	12	120591024	120591024	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	12	120591024	120591024	G	C	SNP	GCN1L1	ENST00000300648	human	ensembl	74_37	-1	known	missense	c.4055	p.S1352C	1.000	superfamily_ARM-type_fold	pfam_DUF3554,pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	GCN1L1	HGNC	ENSG00000089154				28	0	0.00	35	3	7.89
GDAP1L1	0	genome.wustl.edu	37	20	42908227	42908227	+	Nonsense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	20	42908227	42908227	C	G	SNP	GDAP1L1	ENST00000447658	human	ensembl	74_37	+1	known	nonsense	c.290	p.S97*	0.879	superfamily_Glutathione-S-Trfase_C-like	pfam_GST_C,superfamily_Glutathione-S-Trfase_C-like	-	no_errors	GDAP1L1	HGNC	ENSG00000124194	tier1	-	-	47	0	0.00	47	9	16.07
GINS2	0	genome.wustl.edu	37	16	85711917	85711917	+	Silent	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	16	85711917	85711917	G	A	SNP	GINS2	ENST00000253462	human	ensembl	74_37	-1	known	silent	c.459	p.I153	1.000	pfam_GINS_complex,pirsf_GINS_Psf2_subgr	pfam_GINS_complex,pirsf_GINS_Psf2_subgr	-	no_errors	GINS2	HGNC	ENSG00000131153	tier1	-	-	45	0	0.00	62	8	11.43
GJA9	0	genome.wustl.edu	37	1	39340430	39340430	+	Silent	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	39340430	39340430	G	A	SNP	GJA9	ENST00000357771	human	ensembl	74_37	-1	known	silent	c.1341	p.F447	0.004	NULL	pfam_Connexin_N,pfam_Connexin_CCC,smart_Connexin_N,prints_Connexin	-	no_errors	GJA9	HGNC	ENSG00000131233	tier1	-	-	36	0	0.00	56	8	12.50
GLIPR1L1	0	genome.wustl.edu	37	12	75728517	75728517	+	Silent	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	12	75728517	75728517	G	A	SNP	GLIPR1L1	ENST00000378695	human	ensembl	74_37	+1	known	silent	c.9	p.L3	0.000	NULL	pfam_CAP_domain,superfamily_CAP_domain,smart_Allrgn_V5/Tpx1,prints_Allrgn_V5/Tpx1,prints_V5_allergen	-	no_errors	GLIPR1L1	HGNC	ENSG00000173401	tier1	-	-	58	0	0.00	90	14	13.46
GPBP1L1	0	genome.wustl.edu	37	1	46099807	46099807	+	Silent	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	46099807	46099807	C	G	SNP	GPBP1L1	ENST00000290795	human	ensembl	74_37	-1	known	silent	c.846	p.V282	0.998	NULL	NULL	-	no_errors	GPBP1L1	HGNC	ENSG00000159592				53	0	0.00	67	4	5.63
GPR26	0	genome.wustl.edu	37	10	125447475	125447475	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	10	125447475	125447475	C	G	SNP	GPR26	ENST00000284674	human	ensembl	74_37	+1	known	missense	c.813	p.I271M	0.991	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR26	HGNC	ENSG00000154478	tier1	-	-	34	0	0.00	29	6	17.14
GREB1L	0	genome.wustl.edu	37	18	19029503	19029503	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	18	19029503	19029503	G	C	SNP	GREB1L	ENST00000424526	human	ensembl	74_37	+1	known	missense	c.1426	p.E476Q	1.000	NULL	superfamily_P-loop_NTPase	-	no_errors	GREB1L	HGNC	ENSG00000141449				34	0	0.00	28	6	17.65
HAS2	0	genome.wustl.edu	37	8	122626975	122626975	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	8	122626975	122626975	G	T	SNP	HAS2	ENST00000303924	human	ensembl	74_37	-1	known	missense	c.1033	p.L345I	1.000	pfam_Chitin_synth_fng	pfam_Chitin_synth_fng	-	no_errors	HAS2	HGNC	ENSG00000170961	tier1	-	-	67	0	0.00	130	8	5.80
HERC2P3	0	genome.wustl.edu	37	15	20644361	20644361	+	RNA	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	15	20644361	20644361	C	T	SNP	HERC2P3	ENST00000426501	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HERC2P3	HGNC	ENSG00000180229				74	0	0.00	92	6	6.12
HIST1H2BK	0	genome.wustl.edu	37	6	27114569	27114569	+	Silent	SNP	T	T	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	6	27114569	27114569	T	C	SNP	HIST1H2BK	ENST00000356950	human	ensembl	74_37	-1	known	silent	c.9	p.E3	0.083	NULL	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	-	no_errors	HIST1H2BK	HGNC	ENSG00000197903				56	0	0.00	95	8	7.77
HMCN1	0	genome.wustl.edu	37	1	185902877	185902877	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	185902877	185902877	C	G	SNP	HMCN1	ENST00000271588	human	ensembl	74_37	+1	known	missense	c.1749	p.F583L	0.002	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	HMCN1	HGNC	ENSG00000143341	tier1	-	-	77	0	0.00	139	17	10.90
HMCN1	0	genome.wustl.edu	37	1	185902924	185902924	+	Nonsense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	185902924	185902924	C	G	SNP	HMCN1	ENST00000271588	human	ensembl	74_37	+1	known	nonsense	c.1796	p.S599*	0.006	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	HMCN1	HGNC	ENSG00000143341	tier1	-	-	75	0	0.00	153	11	6.71
HSD11B2	0	genome.wustl.edu	37	16	67469707	67469707	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	16	67469707	67469707	G	A	SNP	HSD11B2	ENST00000326152	human	ensembl	74_37	+1	known	missense	c.442	p.V148M	0.208	pfam_DH_sc/Rdtase_SDR	pfam_DH_sc/Rdtase_SDR,prints_Glc/ribitol_DH	-	no_errors	HSD11B2	HGNC	ENSG00000176387	tier1	-	-	17	0	0.00	27	9	25.00
HSPA2	0	genome.wustl.edu	37	14	65009364	65009364	+	Silent	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	14	65009364	65009364	G	A	SNP	HSPA2	ENST00000247207	human	ensembl	74_37	+1	known	silent	c.1797	p.Q599	1.000	pfam_Hsp_70_fam	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPA2	HGNC	ENSG00000126803				15	0	0.00	31	4	11.43
HTR3A	0	genome.wustl.edu	37	11	113856798	113856798	+	Silent	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	11	113856798	113856798	C	T	SNP	HTR3A	ENST00000355556	human	ensembl	74_37	+1	known	silent	c.624	p.V208	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_5HT3_rcpt_A,prints_5HT3_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	HTR3A	HGNC	ENSG00000166736	tier1	-	-	56	0	0.00	77	9	10.47
ICAM5	0	genome.wustl.edu	37	19	10401883	10401883	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	19	10401883	10401883	G	A	SNP	ICAM5	ENST00000221980	human	ensembl	74_37	+1	known	missense	c.218	p.R73Q	0.994	pfam_ICAM_N	pfam_Ig_I-set,pfam_ICAM_N,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom,prints_ICAM_VCAM_N,prints_ICAM	-	no_errors	ICAM5	HGNC	ENSG00000105376				24	0	0.00	30	3	9.09
IFI27L2	0	genome.wustl.edu	37	14	94594153	94594153	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	14	94594153	94594153	C	G	SNP	IFI27L2	ENST00000238609	human	ensembl	74_37	-1	known	missense	c.376	p.E126Q	0.726	NULL	pfam_IFI6/IFI27	-	no_errors	IFI27L2	HGNC	ENSG00000119632	tier1	-	-	121	0	0.00	200	17	7.83
INTS2	0	genome.wustl.edu	37	17	59949628	59949628	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	17	59949628	59949628	G	C	SNP	INTS2	ENST00000444766	human	ensembl	74_37	-1	known	missense	c.2800	p.Q934E	1.000	NULL	NULL	-	no_errors	INTS2	HGNC	ENSG00000108506				46	0	0.00	60	10	14.29
IPP	0	genome.wustl.edu	37	1	46193360	46193360	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	46193360	46193360	G	A	SNP	IPP	ENST00000396478	human	ensembl	74_37	-1	known	nonsense	c.991	p.Q331*	1.000	smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	IPP	HGNC	ENSG00000197429	tier1	-	-	58	0	0.00	63	9	12.50
IPPK	0	genome.wustl.edu	37	9	95414874	95414874	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	9	95414874	95414874	C	G	SNP	IPPK	ENST00000287996	human	ensembl	74_37	-1	known	missense	c.273	p.K91N	1.000	pfam_Ins_P5_2-kin	pfam_Ins_P5_2-kin	-	no_errors	IPPK	HGNC	ENSG00000127080				53	0	0.00	51	3	5.56
ITGA8	0	genome.wustl.edu	37	10	15688954	15688954	+	Silent	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	10	15688954	15688954	C	T	SNP	ITGA8	ENST00000378076	human	ensembl	74_37	-1	known	silent	c.1098	p.V366	0.001	smart_Int_alpha_beta-p	pfam_Integrin_alpha-2,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA8	HGNC	ENSG00000077943	tier1	-	-	61	0	0.00	75	12	13.79
KALRN	0	genome.wustl.edu	37	3	124132352	124132352	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	3	124132352	124132352	G	C	SNP	KALRN	ENST00000360013	human	ensembl	74_37	+1	known	missense	c.2376	p.L792F	1.000	NULL	pfam_DH-domain,pfam_Prot_kinase_dom,pfam_Spectrin_repeat,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRAL-TRIO_dom,pfscan_Fibronectin_type3,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	KALRN	HGNC	ENSG00000160145	tier1	-	-	31	0	0.00	42	6	12.50
KANSL2	0	genome.wustl.edu	37	12	49065687	49065687	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	12	49065687	49065687	G	C	SNP	KANSL2	ENST00000420613	human	ensembl	74_37	-1	known	missense	c.604	p.R202G	1.000	NULL	NULL	-	no_errors	KANSL2	HGNC	ENSG00000139620	tier1	-	-	54	0	0.00	65	5	7.14
KCTD16	0	genome.wustl.edu	37	5	143586365	143586365	+	Missense_Mutation	SNP	A	A	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	5	143586365	143586365	A	C	SNP	KCTD16	ENST00000507359	human	ensembl	74_37	+1	known	missense	c.88	p.N30H	1.000	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	-	no_errors	KCTD16	HGNC	ENSG00000183775				13	0	0.00	34	3	8.11
KCTD4	0	genome.wustl.edu	37	13	45768277	45768277	+	Silent	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	13	45768277	45768277	G	A	SNP	KCTD4	ENST00000379108	human	ensembl	74_37	-1	known	silent	c.426	p.F142	1.000	NULL	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	-	no_errors	KCTD4	HGNC	ENSG00000180332	tier1	-	-	33	0	0.00	46	4	8.00
KERA	0	genome.wustl.edu	37	12	91449383	91449383	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	12	91449383	91449383	C	T	SNP	KERA	ENST00000266719	human	ensembl	74_37	-1	known	missense	c.676	p.E226K	1.000	NULL	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	KERA	HGNC	ENSG00000139330	tier1	-	-	48	0	0.00	63	5	7.35
KHDRBS2	0	genome.wustl.edu	37	6	62688035	62688035	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	6	62688035	62688035	G	T	SNP	KHDRBS2	ENST00000281156	human	ensembl	74_37	-1	known	missense	c.419	p.P140Q	1.000	smart_KH_dom	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	KHDRBS2	HGNC	ENSG00000112232				32	0	0.00	40	3	6.98
KLHL20	0	genome.wustl.edu	37	1	173744844	173744844	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	173744844	173744844	G	C	SNP	KLHL20	ENST00000209884	human	ensembl	74_37	+1	known	missense	c.1501	p.G501R	0.992	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL20	HGNC	ENSG00000076321	tier1	-	-	38	0	0.00	75	8	9.64
KMT2A	0	genome.wustl.edu	37	11	118375063	118375063	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	11	118375063	118375063	C	G	SNP	KMT2A	ENST00000389506	human	ensembl	74_37	+1	known	missense	c.8447	p.S2816C	0.979	pirsf_MeTrfase_trithorax	pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_Bromodomain,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pirsf_MeTrfase_trithorax,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC,pfscan_Bromodomain	-	no_errors	KMT2A	HGNC	ENSG00000118058	tier1	-	-	36	0	0.00	41	4	8.89
KMT2C	0	genome.wustl.edu	37	7	151859780	151859780	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	7	151859780	151859780	C	T	SNP	KMT2C	ENST00000355193	human	ensembl	74_37	-1	known	missense	c.10882	p.D3628N	1.000	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2C	HGNC	ENSG00000055609	tier1	-	-	37	0	0.00	56	14	20.00
KRT28	0	genome.wustl.edu	37	17	38948703	38948703	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	17	38948703	38948703	C	G	SNP	KRT28	ENST00000306658	human	ensembl	74_37	-1	known	missense	c.1371	p.K457N	0.962	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT28	HGNC	ENSG00000173908	tier1	-	-	48	0	0.00	65	5	7.14
KRT9	0	genome.wustl.edu	37	17	39723652	39723652	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	17	39723652	39723652	C	T	SNP	KRT9	ENST00000246662	human	ensembl	74_37	-1	known	missense	c.1745	p.S582N	0.996	NULL	pfam_IF,prints_Keratin_I	-	no_errors	KRT9	HGNC	ENSG00000171403	tier1	-	-	101	0	0.00	176	25	12.44
LAMA4	0	genome.wustl.edu	37	6	112443245	112443245	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	6	112443245	112443245	C	G	SNP	LAMA4	ENST00000230538	human	ensembl	74_37	-1	known	missense	c.4447	p.E1483Q	1.000	superfamily_ConA-like_lec_gl_sf,pfscan_Laminin_G	pfam_Laminin_G,pfam_Laminin_I,pfam_Laminin_II,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Focal_adhesion_kin_target_dom,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Laminin_G	-	no_errors	LAMA4	HGNC	ENSG00000112769	tier1	-	-	51	0	0.00	76	10	11.63
LAMA4	0	genome.wustl.edu	37	6	112496650	112496650	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	6	112496650	112496650	C	T	SNP	LAMA4	ENST00000230538	human	ensembl	74_37	-1	known	missense	c.1222	p.E408K	0.008	pfam_Laminin_I	pfam_Laminin_G,pfam_Laminin_I,pfam_Laminin_II,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Focal_adhesion_kin_target_dom,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Laminin_G	-	no_errors	LAMA4	HGNC	ENSG00000112769				23	0	0.00	40	4	9.09
LHFPL5	0	genome.wustl.edu	37	6	35782462	35782462	+	Silent	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	6	35782462	35782462	C	G	SNP	LHFPL5	ENST00000360215	human	ensembl	74_37	+1	known	silent	c.552	p.L184	1.000	pfam_Lipome_HGMIC_fus_partner-like	pfam_Lipome_HGMIC_fus_partner-like	-	no_errors	LHFPL5	HGNC	ENSG00000197753	tier1	-	-	68	0	0.00	71	5	6.58
LINC00617	0	genome.wustl.edu	37	14	96389122	96389122	+	RNA	SNP	G	G	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	14	96389122	96389122	G	T	SNP	LINC00617	ENST00000503525	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	LINC00617	HGNC	ENSG00000250366				54	0	0.00	75	4	5.06
LINC00905	0	genome.wustl.edu	37	19	16146762	16146762	+	RNA	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	19	16146762	16146762	G	C	SNP	LINC00905	ENST00000588117	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	LINC00905	HGNC	ENSG00000167459	tier1	-	-	26	0	0.00	35	6	14.63
LOC100289283	0	genome.wustl.edu	37	16	29821856	29821856	+	RNA	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	16	29821856	29821856	C	T	SNP	LOC100289283	ENST00000569981	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.996	-	-	-	no_errors	AC009133.14	Clone_based_vega_gene	ENSG00000238045	tier1	-	-	58	0	0.00	75	13	14.77
LOC100506060	0	genome.wustl.edu	37	16	70267382	70267382	+	RNA	SNP	T	T	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	16	70267382	70267382	T	A	SNP	LOC100506060	ENST00000568855	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-296I10.6	Clone_based_vega_gene	ENSG00000261556	tier1	-	-	134	0	0.00	176	55	23.81
LOC100653515	0	genome.wustl.edu	37	17	76888114	76888114	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	17	76888114	76888114	G	A	SNP	LOC100653515	ENST00000322630	human	ensembl	74_37	-1	putative	nonsense	c.472	p.R158*	0.000	NULL	NULL	-	no_errors	DDC8	Uniprot_gn	ENSG00000178404	tier1	-	-	26	0	0.00	32	6	15.79
LOC202181	0	genome.wustl.edu	37	5	177099140	177099140	+	RNA	SNP	T	T	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	5	177099140	177099140	T	A	SNP	LOC202181	ENST00000515045	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.986	-	-	-	no_errors	RP11-1277A3.2	Clone_based_vega_gene	ENSG00000246596	tier1	-	-	8	0	0.00	4	6	60.00
LOC285556	0	genome.wustl.edu	37	4	100574460	100574460	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	4	100574460	100574460	C	T	SNP	LOC285556	ENST00000511828	human	ensembl	74_37	-1	putative	missense	c.1346	p.S449N	0.385	NULL	NULL	-	no_errors	RP11-766F14.2	Clone_based_vega_gene	ENSG00000248713	tier1	-	-	47	0	0.00	52	7	11.86
LOC441666	0	genome.wustl.edu	37	10	42832735	42832735	+	RNA	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	10	42832735	42832735	C	G	SNP	LOC441666	ENST00000609841	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	RP11-313J2.1	Clone_based_vega_gene	ENSG00000215146	tier1	-	-	37	0	0.00	32	8	20.00
LOC729224	0	genome.wustl.edu	37	2	202979699	202979699	+	RNA	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	2	202979699	202979699	G	C	SNP	LOC729224	ENST00000409819	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.035	-	-	-	no_errors	AC079354.3	Clone_based_vega_gene	ENSG00000222035	tier1	-	-	54	0	0.00	72	7	8.86
LRP1B	0	genome.wustl.edu	37	2	141143523	141143523	+	Silent	SNP	G	G	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	2	141143523	141143523	G	T	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	silent	c.10470	p.P3490	0.994	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	tier1	-	-	36	0	0.00	34	12	26.09
LRRTM4	0	genome.wustl.edu	37	2	77746526	77746526	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	2	77746526	77746526	G	A	SNP	LRRTM4	ENST00000409911	human	ensembl	74_37	-1	known	missense	c.472	p.R158W	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRTM4	HGNC	ENSG00000176204	tier1	-	-	44	0	0.00	39	4	9.30
LRTM2	0	genome.wustl.edu	37	12	1936680	1936680	+	RNA	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	12	1936680	1936680	G	C	SNP	LRTM2	ENST00000544489	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	LRTM2	HGNC	ENSG00000166159	tier1	-	-	50	0	0.00	46	6	11.32
LSM14B	0	genome.wustl.edu	37	20	60701373	60701373	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	20	60701373	60701373	C	T	SNP	LSM14B	ENST00000253001	human	ensembl	74_37	+1	known	missense	c.305	p.S102F	1.000	NULL	pfam_FDF_dom,superfamily_LSM_dom	-	no_errors	LSM14B	HGNC	ENSG00000149657	tier1	-	-	49	0	0.00	57	8	12.31
LZTS2	0	genome.wustl.edu	37	10	102762382	102762382	+	Silent	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	10	102762382	102762382	G	C	SNP	LZTS2	ENST00000370220	human	ensembl	74_37	+1	known	silent	c.87	p.V29	1.000	NULL	NULL	-	no_errors	LZTS2	HGNC	ENSG00000107816	tier1	-	-	65	0	0.00	61	18	22.50
MAD2L2	0	genome.wustl.edu	37	1	11735184	11735184	+	Silent	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	11735184	11735184	G	A	SNP	MAD2L2	ENST00000376669	human	ensembl	74_37	-1	known	silent	c.588	p.D196	1.000	superfamily_HORMA_DNA-bd,pfscan_HORMA_DNA-bd	pfam_HORMA_DNA-bd,superfamily_HORMA_DNA-bd,pfscan_HORMA_DNA-bd	-	no_errors	MAD2L2	HGNC	ENSG00000116670				37	0	0.00	32	3	8.57
MAP3K11	0	genome.wustl.edu	37	11	65373507	65373507	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	11	65373507	65373507	C	T	SNP	MAP3K11	ENST00000309100	human	ensembl	74_37	-1	known	missense	c.1649	p.R550Q	0.014	pirsf_MAPKKK9/10/11	pirsf_MAPKKK9/10/11,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH3_2,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH3_domain,pfscan_SH3_domain,pfscan_Prot_kinase_dom	-	no_errors	MAP3K11	HGNC	ENSG00000173327	tier1	-	-	38	0	0.00	53	10	15.87
MAP3K6	0	genome.wustl.edu	37	1	27685071	27685071	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	27685071	27685071	G	A	SNP	MAP3K6	ENST00000357582	human	ensembl	74_37	-1	known	missense	c.2615	p.P872L	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_SAM/pointed,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K6	HGNC	ENSG00000142733				69	0	0.00	72	4	5.26
MDN1	0	genome.wustl.edu	37	6	90402667	90402667	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	6	90402667	90402667	G	C	SNP	MDN1	ENST00000369393	human	ensembl	74_37	-1	known	missense	c.10082	p.S3361C	0.921	pirsf_Midasin	pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_AAA+_ATPase,smart_VWF_A,pirsf_Midasin,pfscan_VWF_A	-	no_errors	MDN1	HGNC	ENSG00000112159	tier1	-	-	41	0	0.00	26	5	16.13
ME1	0	genome.wustl.edu	37	6	83947511	83947511	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	6	83947511	83947511	C	G	SNP	ME1	ENST00000369705	human	ensembl	74_37	-1	known	missense	c.951	p.L317F	1.000	pfam_Malic_NAD-bd,smart_Malic_NAD-bd	pfam_Malic_NAD-bd,pfam_Malic_N,smart_Malic_NAD-bd,prints_Malic_OxRdtase	-	no_errors	ME1	HGNC	ENSG00000065833	tier1	-	-	37	0	0.00	63	7	10.00
MEA1	0	genome.wustl.edu	37	6	42980987	42980987	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	6	42980987	42980987	C	G	SNP	MEA1	ENST00000244711	human	ensembl	74_37	-1	known	missense	c.169	p.E57Q	1.000	pfam_MEA1	pfam_MEA1	-	no_errors	MEA1	HGNC	ENSG00000124733	tier1	-	-	66	0	0.00	76	12	13.64
MED13L	0	genome.wustl.edu	37	12	116434866	116434866	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	12	116434866	116434866	G	C	SNP	MED13L	ENST00000281928	human	ensembl	74_37	-1	known	missense	c.2739	p.F913L	0.969	NULL	pfam_Mediator_Med13,pfam_Mediator_Med13_N_met/fun	-	no_errors	MED13L	HGNC	ENSG00000123066	tier1	-	-	39	0	0.00	55	4	6.78
MIA3	0	genome.wustl.edu	37	1	222826624	222826624	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	222826624	222826624	G	C	SNP	MIA3	ENST00000344441	human	ensembl	74_37	+1	known	missense	c.4264	p.E1422Q	0.155	NULL	pfam_SH3_2,superfamily_SH3_domain	-	no_errors	MIA3	HGNC	ENSG00000154305				41	0	0.00	72	6	7.69
MRAS	0	genome.wustl.edu	37	3	138121105	138121105	+	Silent	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	3	138121105	138121105	C	T	SNP	MRAS	ENST00000289104	human	ensembl	74_37	+1	known	silent	c.621	p.I207	0.741	smart_Ran_GTPase	pfam_Small_GTPase,pfam_MIRO-like,pfam_EF_GTP-bd_dom,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	MRAS	HGNC	ENSG00000158186	tier1	-	-	41	0	0.00	54	14	20.59
MROH9	0	genome.wustl.edu	37	1	170959080	170959080	+	Silent	SNP	T	T	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	170959080	170959080	T	C	SNP	MROH9	ENST00000367759	human	ensembl	74_37	+1	known	silent	c.964	p.L322	0.006	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	MROH9	HGNC	ENSG00000117501	tier1	-	-	55	0	0.00	97	7	6.73
MSH3	0	genome.wustl.edu	37	5	79950579	79950579	+	Silent	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	5	79950579	79950579	C	G	SNP	MSH3	ENST00000265081	human	ensembl	74_37	+1	known	silent	c.33	p.L11	0.000	NULL	pfam_DNA_mismatch_repair_MutS_C,pfam_DNA_mismatch_repair_MutS_core,pfam_DNA_mmatch_repair_MutS_con_dom,pfam_DNA_mismatch_repair_MutS-lik_N,pfam_DNA_mismatch_repair_MutS_clamp,superfamily_DNA_mismatch_repair_MutS_core,superfamily_P-loop_NTPase,superfamily_DNA_mismatch_repair_MutS_N,superfamily_DNA_mmatch_repair_MutS_con_dom,smart_DNA_mismatch_repair_MutS_core,smart_DNA_mismatch_repair_MutS_C	-	no_errors	MSH3	HGNC	ENSG00000113318				30	0	0.00	26	3	10.34
MTMR8	0	genome.wustl.edu	37	X	63445264	63445264	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	X	63445264	63445264	C	A	SNP	MTMR8	ENST00000453546	human	ensembl	74_37	-1	known	missense	c.1392	p.L464F	0.957	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Myotubularin-like_Pase_dom,pfam_Ankyrin_rpt,pfam_SOCS_C,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_SOCS_C,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	MTMR8	HGNC	ENSG00000102043	tier1	-	-	16	0	0.00	21	11	34.38
MUC16	0	genome.wustl.edu	37	19	9084625	9084625	+	Nonsense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	19	9084625	9084625	G	C	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	nonsense	c.7190	p.S2397*	0.007	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	54	0	0.00	84	12	12.50
MYBL1	0	genome.wustl.edu	37	8	67485683	67485683	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	8	67485683	67485683	G	T	SNP	MYBL1	ENST00000522677	human	ensembl	74_37	-1	known	nonsense	c.1529	p.S510*	1.000	pfam_C-myb_C	pfam_C-myb_C,pfam_SANT/Myb,pfam_Tscrpt_reg_Wos2-domain,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	MYBL1	HGNC	ENSG00000185697	tier1	-	-	61	0	0.00	87	5	5.43
MYH13	0	genome.wustl.edu	37	17	10206759	10206759	+	Silent	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	17	10206759	10206759	C	G	SNP	MYH13	ENST00000252172	human	ensembl	74_37	-1	known	silent	c.5523	p.L1841	0.819	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH13	HGNC	ENSG00000006788	tier1	-	-	65	0	0.00	98	10	9.26
MYH14	0	genome.wustl.edu	37	19	50720965	50720965	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	19	50720965	50720965	C	T	SNP	MYH14	ENST00000262269	human	ensembl	74_37	+1	known	missense	c.499	p.R167C	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH14	HGNC	ENSG00000105357	tier1	-	-	35	0	0.00	41	4	8.89
MYH4	0	genome.wustl.edu	37	17	10354724	10354724	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	17	10354724	10354724	C	T	SNP	MYH4	ENST00000255381	human	ensembl	74_37	-1	known	missense	c.3784	p.E1262K	1.000	pfam_Myosin_tail,superfamily_Prefoldin	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH4	HGNC	ENSG00000264424	tier1	-	-	58	0	0.00	75	10	11.63
MYO9A	0	genome.wustl.edu	37	15	72244100	72244100	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	15	72244100	72244100	C	G	SNP	MYO9A	ENST00000566885	human	ensembl	74_37	-1	putative	missense	c.1105	p.D369H	0.009	superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO9A	HGNC	ENSG00000066933	tier1	-	-	61	0	0.00	89	10	10.10
MYT1L	0	genome.wustl.edu	37	2	1795777	1795777	+	Missense_Mutation	SNP	A	A	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	2	1795777	1795777	A	T	SNP	MYT1L	ENST00000399161	human	ensembl	74_37	-1	known	missense	c.3423	p.D1141E	1.000	NULL	pfam_Myelin_TF,pfam_Znf_C2HC	-	no_errors	MYT1L	HGNC	ENSG00000186487	tier1	-	-	23	0	0.00	15	5	25.00
NAV3	0	genome.wustl.edu	37	12	78569186	78569186	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	12	78569186	78569186	G	C	SNP	NAV3	ENST00000397909	human	ensembl	74_37	+1	known	missense	c.5082	p.K1694N	1.000	NULL	pfam_CH-domain,pfam_ATPase_AAA_core,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV3	HGNC	ENSG00000067798	tier1	-	-	96	0	0.00	107	10	8.55
NDUFB7	0	genome.wustl.edu	37	19	14677011	14677011	+	Silent	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	19	14677011	14677011	C	T	SNP	NDUFB7	ENST00000215565	human	ensembl	74_37	-1	known	silent	c.348	p.E116	0.002	NULL	pfam_NADH_UbQ_OxRdtase_B18_su	-	no_errors	NDUFB7	HGNC	ENSG00000099795	tier1	-	-	53	0	0.00	70	6	7.89
NIPBL	0	genome.wustl.edu	37	5	36975895	36975895	+	Missense_Mutation	SNP	A	A	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	5	36975895	36975895	A	G	SNP	NIPBL	ENST00000282516	human	ensembl	74_37	+1	known	missense	c.886	p.I296V	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	NIPBL	HGNC	ENSG00000164190	tier1	-	-	28	0	0.00	42	7	14.29
NOL10	0	genome.wustl.edu	37	2	10799328	10799328	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	2	10799328	10799328	C	G	SNP	NOL10	ENST00000381685	human	ensembl	74_37	-1	known	missense	c.726	p.L242F	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_NUC153,superfamily_WD40_repeat_dom,smart_WD40_repeat	-	no_errors	NOL10	HGNC	ENSG00000115761	tier1	-	-	41	0	0.00	60	8	11.76
NOTCH1	0	genome.wustl.edu	37	9	139404376	139404377	+	Frame_Shift_Ins	INS	-	-	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	9	139404376	139404377	-	A	INS	NOTCH1	ENST00000277541	human	ensembl	74_37	-1	known	frame_shift_ins	c.2778_2777	p.N927fs	0.907:0.900	pfam_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pirsf_Notch,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,pfam_Ankyrin_rpt,pfam_EGF_extracell,pfam_Notch_NOD_dom,pfam_DUF3454_notch,pfam_Notch_NODP_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,pirsf_Notch,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom,prints_Notch_1,prints_Notch_dom	-	no_errors	NOTCH1	HGNC	ENSG00000148400	tier1			58	0	0.00	53	16	23.19
NOTCH2	0	genome.wustl.edu	37	1	120484162	120484162	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	120484162	120484162	C	T	SNP	NOTCH2	ENST00000256646	human	ensembl	74_37	-1	known	missense	c.2968	p.E990K	1.000	pirsf_Notch,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pirsf_Notch,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,pfam_Ankyrin_rpt,pfam_Notch_NOD_dom,pfam_DUF3454_notch,pfam_Notch_NODP_dom,pfam_EGF_extracell,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,prints_Notch_2,prints_Notch_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom	-	no_errors	NOTCH2	HGNC	ENSG00000134250	tier1	-	-	68	0	0.00	111	10	8.26
NPAS3	0	genome.wustl.edu	37	14	34029384	34029384	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	14	34029384	34029384	G	A	SNP	NPAS3	ENST00000356141	human	ensembl	74_37	+1	known	missense	c.526	p.E176K	1.000	pfam_PAS_fold,superfamily_PAS,smart_PAS,pfscan_PAS	pfam_PAS_fold_3,pfam_PAS_fold,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	NPAS3	HGNC	ENSG00000151322	tier1	-	-	50	0	0.00	80	13	13.98
NRCAM	0	genome.wustl.edu	37	7	107789071	107789071	+	RNA	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	7	107789071	107789071	C	G	SNP	NRCAM	ENST00000522550	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.641	-	-	-	no_errors	NRCAM	HGNC	ENSG00000091129	tier1	-	-	46	0	0.00	48	9	15.79
NTRK3	0	genome.wustl.edu	37	15	88474392	88474392	+	RNA	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	15	88474392	88474392	C	G	SNP	NTRK3	ENST00000559680	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	NTRK3	HGNC	ENSG00000140538	tier1	-	-	86	0	0.00	133	11	7.64
OR4C15	0	genome.wustl.edu	37	11	55321806	55321806	+	Silent	SNP	A	A	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	11	55321806	55321806	A	G	SNP	OR4C15	ENST00000314644	human	ensembl	74_37	+1	known	silent	c.24	p.A8	0.001	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C15	HGNC	ENSG00000181939	tier1	-	-	36	0	0.00	60	9	13.04
OR4C15	0	genome.wustl.edu	37	11	55321807	55321807	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	11	55321807	55321807	C	A	SNP	OR4C15	ENST00000314644	human	ensembl	74_37	+1	known	missense	c.25	p.L9I	0.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C15	HGNC	ENSG00000181939	tier1	-	-	37	0	0.00	60	9	13.04
OR4C5	0	genome.wustl.edu	37	11	48387907	48387907	+	Silent	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	11	48387907	48387907	G	A	SNP	OR4C5	ENST00000319813	human	ensembl	74_37	-1	known	silent	c.111	p.G37	0.989	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C5	HGNC	ENSG00000176540	tier1	-	-	40	0	0.00	70	7	9.09
OR5AK2	0	genome.wustl.edu	37	11	56756448	56756448	+	Silent	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	11	56756448	56756448	G	A	SNP	OR5AK2	ENST00000326855	human	ensembl	74_37	+1	known	silent	c.60	p.Q20	0.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5AK2	HGNC	ENSG00000181273	tier1	-	-	100	0	0.00	147	14	8.70
OSBPL6	0	genome.wustl.edu	37	2	179197727	179197727	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	2	179197727	179197727	G	C	SNP	OSBPL6	ENST00000315022	human	ensembl	74_37	+1	known	missense	c.553	p.E185Q	1.000	NULL	pfam_Oxysterol-bd,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBPL6	HGNC	ENSG00000079156				36	0	0.00	45	3	6.25
OTP	0	genome.wustl.edu	37	5	76932724	76932724	+	Silent	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	5	76932724	76932724	G	A	SNP	OTP	ENST00000306422	human	ensembl	74_37	-1	known	silent	c.369	p.F123	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,prints_HTH_motif,pfscan_OAR_dom,pfscan_Homeobox_dom	-	no_errors	OTP	HGNC	ENSG00000171540	tier1	-	-	98	0	0.00	101	7	6.48
OTUD1	0	genome.wustl.edu	37	10	23729743	23729743	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	10	23729743	23729743	C	G	SNP	OTUD1	ENST00000376495	human	ensembl	74_37	+1	known	missense	c.1357	p.Q453E	1.000	NULL	pfam_OTU,pfscan_OTU	-	no_errors	OTUD1	HGNC	ENSG00000165312				30	0	0.00	36	3	7.50
OXA1L	0	genome.wustl.edu	37	14	23235862	23235862	+	Silent	SNP	T	T	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	14	23235862	23235862	T	C	SNP	OXA1L	ENST00000285848	human	ensembl	74_37	+1	known	silent	c.132	p.G44	0.000	NULL	pfam_Membrane_insert_OXA1/ALB3/YidC,tigrfam_Membr_insert_YidC/Oxa1_C	-	no_errors	OXA1L	HGNC	ENSG00000155463	tier1	-	-	35	0	0.00	54	8	12.90
P2RY4	0	genome.wustl.edu	37	X	69478523	69478523	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	X	69478523	69478523	G	A	SNP	P2RY4	ENST00000374519	human	ensembl	74_37	-1	known	missense	c.952	p.R318C	0.023	prints_P2Y4_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_P2Y4_rcpt,prints_GPCR_Rhodpsn,prints_P2Y2_rcpt	-	no_errors	P2RY4	HGNC	ENSG00000186912	tier1	-	-	40	0	0.00	44	22	33.33
PAPD5	0	genome.wustl.edu	37	16	50261847	50261847	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	16	50261847	50261847	C	T	SNP	PAPD5	ENST00000436909	human	ensembl	74_37	+1	known	missense	c.1853	p.S618F	1.000	NULL	pfam_PAP_assoc,pfam_Nucleotidyltransferase	-	no_errors	PAPD5	HGNC	ENSG00000121274	tier1	-	-	54	0	0.00	87	27	23.68
PCCA	0	genome.wustl.edu	37	13	100861714	100861714	+	Silent	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	13	100861714	100861714	C	G	SNP	PCCA	ENST00000376285	human	ensembl	74_37	+1	known	silent	c.597	p.V199	1.000	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_ATP-grasp_RimK-type,pfam_ATP-grasp_carboxylate-amine,pfscan_ATP-grasp,pfscan_Biotin_carboxylation_dom	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_lsu_N,pfam_Biotin_COase_C,pfam_Biotin_lipoyl,pfam_Dala_Dala_lig_C,pfam_ATP-grasp_RimK-type,pfam_ATP-grasp_carboxylate-amine,superfamily_PreATP-grasp_dom,superfamily_Rudment_hybrid_motif,superfamily_Single_hybrid_motif,smart_Biotin_COase_C,pfscan_ATP-grasp,pfscan_Biotin_carboxylation_dom,pfscan_Biotin_lipoyl	-	no_errors	PCCA	HGNC	ENSG00000175198	tier1	-	-	28	0	0.00	48	4	7.69
PCDHA2	0	genome.wustl.edu	37	5	140174599	140174599	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	5	140174599	140174599	C	G	SNP	PCDHA2	ENST00000526136	human	ensembl	74_37	+1	known	missense	c.50	p.S17W	0.968	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA2	HGNC	ENSG00000204969	tier1	-	-	39	0	0.00	54	8	12.90
PCDHB1	0	genome.wustl.edu	37	5	140431453	140431453	+	Missense_Mutation	SNP	T	T	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	5	140431453	140431453	T	C	SNP	PCDHB1	ENST00000306549	human	ensembl	74_37	+1	known	missense	c.398	p.F133S	0.998	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB1	HGNC	ENSG00000171815	tier1	-	-	32	0	0.00	25	6	19.35
PCDHB6	0	genome.wustl.edu	37	5	140530592	140530592	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	5	140530592	140530592	G	A	SNP	PCDHB6	ENST00000231136	human	ensembl	74_37	+1	known	missense	c.754	p.E252K	1.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB6	HGNC	ENSG00000113211	tier1	-	-	34	0	0.00	37	9	19.57
PCED1A	0	genome.wustl.edu	37	20	2818908	2818908	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	20	2818908	2818908	C	A	SNP	PCED1A	ENST00000360652	human	ensembl	74_37	-1	known	missense	c.811	p.V271L	0.991	NULL	NULL	-	no_errors	PCED1A	HGNC	ENSG00000132635	tier1	-	-	44	0	0.00	74	8	9.76
PCIF1	0	genome.wustl.edu	37	20	44567713	44567713	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	20	44567713	44567713	G	C	SNP	PCIF1	ENST00000372409	human	ensembl	74_37	+1	known	missense	c.75	p.Q25H	1.000	NULL	pfam_PCIF1_WW,pfam_WW_dom,superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	-	no_errors	PCIF1	HGNC	ENSG00000100982	tier1	-	-	48	0	0.00	67	8	10.67
PDLIM3	0	genome.wustl.edu	37	4	186456520	186456520	+	Silent	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	4	186456520	186456520	G	A	SNP	PDLIM3	ENST00000284770	human	ensembl	74_37	-1	known	silent	c.69	p.F23	0.999	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,pfam_Znf_LIM,superfamily_PDZ,smart_PDZ,smart_ZASP,smart_Znf_LIM,pfscan_Znf_LIM,pfscan_PDZ	-	no_errors	PDLIM3	HGNC	ENSG00000154553	tier1	-	-	46	0	0.00	50	7	12.28
PDS5B	0	genome.wustl.edu	37	13	33330027	33330027	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	13	33330027	33330027	C	G	SNP	PDS5B	ENST00000315596	human	ensembl	74_37	+1	known	missense	c.2989	p.H997D	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	PDS5B	HGNC	ENSG00000083642	tier1	-	-	36	0	0.00	26	7	21.21
PDXK	0	genome.wustl.edu	37	21	45152385	45152385	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	21	45152385	45152385	G	C	SNP	PDXK	ENST00000327574	human	ensembl	74_37	+1	putative	missense	c.127	p.E43Q	0.060	NULL	NULL	-	no_errors	PDXK	HGNC	ENSG00000160209	tier1	-	-	67	0	0.00	53	11	17.19
PEAK1	0	genome.wustl.edu	37	15	77407012	77407012	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	15	77407012	77407012	C	T	SNP	PEAK1	ENST00000312493	human	ensembl	74_37	-1	known	missense	c.4727	p.R1576H	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	-	no_errors	PEAK1	HGNC	ENSG00000173517	tier1	-	-	39	0	0.00	54	11	16.92
PHLDB3	0	genome.wustl.edu	37	19	43983562	43983562	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	19	43983562	43983562	C	G	SNP	PHLDB3	ENST00000292140	human	ensembl	74_37	-1	known	missense	c.1669	p.D557H	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PHLDB3	HGNC	ENSG00000176531	tier1	-	-	59	0	0.00	77	10	11.49
PIKFYVE	0	genome.wustl.edu	37	2	209182630	209182630	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	2	209182630	209182630	G	T	SNP	PIKFYVE	ENST00000264380	human	ensembl	74_37	+1	known	missense	c.2047	p.G683C	1.000	pfam_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom	pfam_PInositol-4-P-5-kinase_core,pfam_Cpn60/TCP-1,pfam_DEP_dom,pfam_Znf_FYVE,superfamily_GroEL-like_apical_dom,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,smart_DEP_dom,smart_PInositol-4P-5-kinase_core_sub,pfscan_DEP_dom,pfscan_Znf_FYVE-rel	-	no_errors	PIKFYVE	HGNC	ENSG00000115020				60	0	0.00	76	4	5.00
PLBD1	0	genome.wustl.edu	37	12	14664608	14664608	+	Silent	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	12	14664608	14664608	G	A	SNP	PLBD1	ENST00000240617	human	ensembl	74_37	-1	known	silent	c.882	p.S294	1.000	pfam_PLipase_B-like	pfam_PLipase_B-like	-	no_errors	PLBD1	HGNC	ENSG00000121316	tier1	-	-	35	0	0.00	61	8	11.59
PLCG1	0	genome.wustl.edu	37	20	39788339	39788339	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	20	39788339	39788339	C	T	SNP	PLCG1	ENST00000244007	human	ensembl	74_37	+1	known	missense	c.311	p.S104L	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pirsf_PLC-gamma,pfscan_Pleckstrin_homology	pfam_PLipase_C_PInositol-sp_X_dom,pfam_SH2,pfam_PLipase_C_Pinositol-sp_Y,pfam_Pleckstrin_homology,pfam_C2_dom,pfam_SH3_domain,pfam_SH3_2,pfam_PLipase_C_EF-hand-like,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_PLipase_C_PInositol-sp_X_dom,smart_SH2,smart_SH3_domain,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pirsf_PLC-gamma,pfscan_EF_hand_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C,prints_SH2	-	no_errors	PLCG1	HGNC	ENSG00000124181	tier1	-	-	43	0	0.00	73	4	5.19
PLEC	0	genome.wustl.edu	37	8	144996792	144996792	+	Silent	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	8	144996792	144996792	C	T	SNP	PLEC	ENST00000322810	human	ensembl	74_37	-1	known	silent	c.7716	p.E2572	1.000	NULL	pfam_Plectin_repeat,pfam_CH-domain,pfam_S10_plectin_N,superfamily_CH-domain,superfamily_Chorismate_mutase_type_II,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,pfscan_CH-domain	-	no_errors	PLEC	HGNC	ENSG00000178209	tier1	-	-	21	0	0.00	51	13	20.31
PLEKHA6	0	genome.wustl.edu	37	1	204228389	204228389	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	204228389	204228389	C	T	SNP	PLEKHA6	ENST00000272203	human	ensembl	74_37	-1	known	missense	c.1004	p.R335Q	0.863	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHA6	HGNC	ENSG00000143850	tier1	-	-	25	0	0.00	33	5	13.16
PLEKHM2	0	genome.wustl.edu	37	1	16043265	16043265	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	16043265	16043265	C	G	SNP	PLEKHM2	ENST00000375799	human	ensembl	74_37	+1	known	missense	c.231	p.I77M	0.995	pfam_Run,pfscan_Run	pfam_Run,pfam_Pleckstrin_homology,smart_Run,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Run	-	no_errors	PLEKHM2	HGNC	ENSG00000116786	tier1	-	-	32	0	0.00	41	4	8.70
PLXNA2	0	genome.wustl.edu	37	1	208390941	208390941	+	Silent	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	208390941	208390941	G	A	SNP	PLXNA2	ENST00000367033	human	ensembl	74_37	-1	known	silent	c.327	p.L109	0.965	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA2	HGNC	ENSG00000076356	tier1	-	-	57	0	0.00	97	11	10.19
PLXND1	0	genome.wustl.edu	37	3	129324787	129324787	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	3	129324787	129324787	G	T	SNP	PLXND1	ENST00000324093	human	ensembl	74_37	-1	known	missense	c.696	p.F232L	1.000	superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT,pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXND1	HGNC	ENSG00000004399				22	0	0.00	18	3	14.29
PNPLA6	0	genome.wustl.edu	37	19	7600729	7600729	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	19	7600729	7600729	G	C	SNP	PNPLA6	ENST00000414982	human	ensembl	74_37	+1	known	missense	c.82	p.E28Q	0.000	NULL	pfam_cNMP-bd_dom,pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	PNPLA6	HGNC	ENSG00000032444				56	0	0.00	57	4	6.56
PODN	0	genome.wustl.edu	37	1	53544495	53544495	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	53544495	53544495	C	T	SNP	PODN	ENST00000312553	human	ensembl	74_37	+1	known	missense	c.1457	p.S486L	1.000	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_LRR-contain_N,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	PODN	HGNC	ENSG00000174348	tier1	-	-	54	0	0.00	63	7	10.00
POLG	0	genome.wustl.edu	37	15	89876828	89876830	+	In_Frame_Del	DEL	TGC	TGC	-			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	TGC	TGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	15	89876828	89876830	TGC	-	DEL	POLG	ENST00000268124	human	ensembl	74_37	-1	known	in_frame_del	c.158_156	p.Q55in_frame_del	0.005:0.011:0.014	pirsf_DNA-dir_DNA_pol_A_mt_sub	pirsf_DNA-dir_DNA_pol_A_mt_sub,pfam_DNA-dir_DNA_pol_A_palm_dom,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_A_palm_dom,prints_DNA-dir_DNA_pol_A_mt	-	no_errors	POLG	HGNC	ENSG00000140521	tier1			23	0	0.00	31	4	11.43
POLR3A	0	genome.wustl.edu	37	10	79784318	79784318	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	10	79784318	79784318	C	T	SNP	POLR3A	ENST00000372371	human	ensembl	74_37	-1	known	missense	c.634	p.G212R	1.000	pfam_RNA_pol_Rpb1_1	pfam_RNA_pol_Rpb1_1,pfam_RNA_pol_Rpb1_5,pfam_RNA_pol_asu,pfam_RNA_pol_Rpb1_3,pfam_RNA_pol_Rpb1_4,smart_RNA_pol_N	-	no_errors	POLR3A	HGNC	ENSG00000148606	tier1	-	-	37	0	0.00	40	10	20.00
PPIP5K2	0	genome.wustl.edu	37	5	102488444	102488444	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	5	102488444	102488444	C	A	SNP	PPIP5K2	ENST00000358359	human	ensembl	74_37	+1	known	missense	c.1121	p.S374Y	1.000	NULL	pfam_His_Pase_superF_clade-2	-	no_errors	PPIP5K2	HGNC	ENSG00000145725	tier1	-	-	51	0	0.00	50	10	16.67
PRDM15	0	genome.wustl.edu	37	21	43221625	43221625	+	Silent	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	21	43221625	43221625	C	T	SNP	PRDM15	ENST00000269844	human	ensembl	74_37	-1	known	silent	c.4299	p.P1433	0.006	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM15	HGNC	ENSG00000141956				67	0	0.00	67	5	6.94
PROSER1	0	genome.wustl.edu	37	13	39591640	39591640	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	13	39591640	39591640	G	C	SNP	PROSER1	ENST00000352251	human	ensembl	74_37	-1	known	missense	c.772	p.Q258E	1.000	NULL	NULL	-	no_errors	PROSER1	HGNC	ENSG00000120685	tier1	-	-	42	0	0.00	50	5	9.09
PRR26	0	genome.wustl.edu	37	10	697123	697123	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	10	697123	697123	G	A	SNP	PRR26	ENST00000441152	human	ensembl	74_37	+1	known	missense	c.616	p.V206I	0.001	NULL	NULL	-	no_errors	PRR26	HGNC	ENSG00000180525				22	0	0.00	25	3	10.71
PSMD11	0	genome.wustl.edu	37	17	30806325	30806325	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	17	30806325	30806325	G	T	SNP	PSMD11	ENST00000261712	human	ensembl	74_37	+1	known	missense	c.969	p.L323F	1.000	pfam_PCI_dom,smart_PCI_dom	pfam_PCI_dom,smart_PAM,smart_PCI_dom	-	no_errors	PSMD11	HGNC	ENSG00000108671	tier1	-	-	44	0	0.00	73	4	5.19
PSMG3	0	genome.wustl.edu	37	7	1608892	1608892	+	Silent	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	7	1608892	1608892	G	A	SNP	PSMG3	ENST00000252329	human	ensembl	74_37	-1	known	silent	c.84	p.F28	1.000	NULL	pfam_Proteasome_assmbl_chp_3	-	no_errors	PSMG3	HGNC	ENSG00000157778				19	0	0.00	55	8	12.70
PTBP1	0	genome.wustl.edu	37	19	806462	806462	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	19	806462	806462	C	T	SNP	PTBP1	ENST00000356948	human	ensembl	74_37	+1	known	missense	c.1025	p.A342V	0.382	tigrfam_HnRNP-L_PTB	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP-L_PTB	-	no_errors	PTBP1	HGNC	ENSG00000011304	tier1	-	-	52	0	0.00	59	7	10.61
PTCD3	0	genome.wustl.edu	37	2	86361473	86361473	+	Silent	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	2	86361473	86361473	C	T	SNP	PTCD3	ENST00000254630	human	ensembl	74_37	+1	known	silent	c.1602	p.L534	0.999	NULL	NULL	-	no_errors	PTCD3	HGNC	ENSG00000132300	tier1	-	-	52	0	0.00	68	4	5.56
PTPRT	0	genome.wustl.edu	37	20	41306583	41306583	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	20	41306583	41306583	C	G	SNP	PTPRT	ENST00000373198	human	ensembl	74_37	-1	known	missense	c.1076	p.R359P	0.998	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRT	HGNC	ENSG00000196090	tier1	-	-	45	0	0.00	83	6	6.74
RECK	0	genome.wustl.edu	37	9	36112352	36112352	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	9	36112352	36112352	G	A	SNP	RECK	ENST00000377966	human	ensembl	74_37	+1	known	missense	c.1939	p.G647R	1.000	pfam_Kazal_dom,smart_Kazal_dom	pfam_Kazal_dom,superfamily_Prot_inh_PMP,smart_Kazal_dom	-	no_errors	RECK	HGNC	ENSG00000122707	tier1	-	-	65	0	0.00	62	24	27.91
REG1A	0	genome.wustl.edu	37	2	79349978	79349978	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	2	79349978	79349978	G	A	SNP	REG1A	ENST00000233735	human	ensembl	74_37	+1	known	nonsense	c.333	p.W111*	0.962	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin,prints_AntifreezeII	-	no_errors	REG1A	HGNC	ENSG00000115386	tier1	-	-	31	0	0.00	41	5	10.87
RFPL2	0	genome.wustl.edu	37	22	32587193	32587193	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	22	32587193	32587193	G	C	SNP	RFPL2	ENST00000400237	human	ensembl	74_37	-1	known	missense	c.703	p.R235G	0.059	superfamily_ConA-like_lec_gl_sf,smart_PRY,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_RDM_domain_RFPL,pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	-	no_errors	RFPL2	HGNC	ENSG00000128253	tier1	-	-	109	0	0.00	174	12	6.45
RFX2	0	genome.wustl.edu	37	19	6190810	6190811	+	RNA	DEL	AT	AT	-			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	AT	AT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	19	6190810	6190811	AT	-	DEL	RFX2	ENST00000587700	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RFX2	HGNC	ENSG00000087903	tier1			8	0	0.00	8	7	46.67
RGL3	0	genome.wustl.edu	37	19	11510589	11510589	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	19	11510589	11510589	C	G	SNP	RGL3	ENST00000393423	human	ensembl	74_37	-1	known	missense	c.1706	p.R569T	0.000	NULL	pfam_RasGRF_CDC25,pfam_Ras-assoc,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,smart_Ras-assoc,pfscan_Ras-assoc,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RGL3	HGNC	ENSG00000205517	tier1	-	-	27	0	0.00	33	6	15.38
RILP	0	genome.wustl.edu	37	17	1551189	1551189	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	17	1551189	1551189	C	T	SNP	RILP	ENST00000301336	human	ensembl	74_37	-1	known	missense	c.884	p.R295Q	0.966	pfam_RILP	pfam_RILP,pfam_JNK/Rab-associated_protein-1_N	-	no_errors	RILP	HGNC	ENSG00000167705	tier1	-	-	31	0	0.00	38	4	9.52
RNF41	0	genome.wustl.edu	37	12	56600447	56600447	+	Silent	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	12	56600447	56600447	C	T	SNP	RNF41	ENST00000345093	human	ensembl	74_37	-1	known	silent	c.738	p.L246	1.000	pfam_USP8_interacting	pfam_USP8_interacting,pfam_Znf_C3HC4_RING-type,pfam_Ubox_domain,superfamily_TRAF-like,smart_Znf_RING,pfscan_Znf_RING,pfscan_Znf_SIAH	-	no_errors	RNF41	HGNC	ENSG00000181852				49	0	0.00	74	4	5.13
RPE65	0	genome.wustl.edu	37	1	68910473	68910473	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	68910473	68910473	C	A	SNP	RPE65	ENST00000262340	human	ensembl	74_37	-1	known	missense	c.339	p.K113N	1.000	pfam_Carotenoid_Oase	pfam_Carotenoid_Oase	-	no_errors	RPE65	HGNC	ENSG00000116745				22	0	0.00	31	4	11.43
RRP15	0	genome.wustl.edu	37	1	218480911	218480911	+	Silent	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	218480911	218480911	G	A	SNP	RRP15	ENST00000366932	human	ensembl	74_37	+1	known	silent	c.642	p.L214	0.295	pfam_DUF1665	pfam_DUF1665	-	no_errors	RRP15	HGNC	ENSG00000067533	tier1	-	-	46	0	0.00	90	11	10.89
RTKN	0	genome.wustl.edu	37	2	74657797	74657797	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	2	74657797	74657797	C	G	SNP	RTKN	ENST00000272430	human	ensembl	74_37	-1	known	missense	c.319	p.D107H	0.996	NULL	pfam_Pleckstrin_homology,pfam_HR1_rho-bd,superfamily_HR1_rho-bd,smart_HR1_rho-bd,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	RTKN	HGNC	ENSG00000114993	tier1	-	-	60	0	0.00	72	7	8.86
RUSC2	0	genome.wustl.edu	37	9	35547582	35547582	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	9	35547582	35547582	C	T	SNP	RUSC2	ENST00000361226	human	ensembl	74_37	+1	known	missense	c.1064	p.S355F	1.000	NULL	pfam_Run,pfam_SH3_2,superfamily_SH3_domain,smart_Run,smart_SH3_domain,pfscan_Run,pfscan_SH3_domain	-	no_errors	RUSC2	HGNC	ENSG00000198853	tier1	-	-	24	0	0.00	31	13	29.55
RYR2	0	genome.wustl.edu	37	1	237895425	237895425	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	237895425	237895425	G	C	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	missense	c.11009	p.S3670T	1.000	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626	tier1	-	-	36	0	0.00	55	9	14.06
RYR3	0	genome.wustl.edu	37	15	34078107	34078107	+	Silent	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	15	34078107	34078107	C	T	SNP	RYR3	ENST00000389232	human	ensembl	74_37	+1	known	silent	c.9513	p.L3171	1.000	superfamily_ARM-type_fold	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838	tier1	-	-	33	0	0.00	43	7	14.00
SAMD4A	0	genome.wustl.edu	37	14	55203862	55203862	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	14	55203862	55203862	G	C	SNP	SAMD4A	ENST00000392067	human	ensembl	74_37	+1	known	missense	c.836	p.R279T	1.000	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM	-	no_errors	SAMD4A	HGNC	ENSG00000020577	tier1	-	-	55	0	0.00	88	11	11.11
SCAF8	0	genome.wustl.edu	37	6	155153402	155153402	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	6	155153402	155153402	C	A	SNP	SCAF8	ENST00000367186	human	ensembl	74_37	+1	known	missense	c.2887	p.L963M	0.996	NULL	pfam_RNA_pol_II-bd,pfam_RRM_dom,superfamily_ENTH_VHS,smart_CID_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SCAF8	HGNC	ENSG00000213079	tier1	-	-	33	0	0.00	58	4	6.45
SCG2	0	genome.wustl.edu	37	2	224463090	224463090	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	2	224463090	224463090	G	A	SNP	SCG2	ENST00000305409	human	ensembl	74_37	-1	known	missense	c.911	p.S304L	1.000	pfam_Granin	pfam_Granin	-	no_errors	SCG2	HGNC	ENSG00000171951	tier1	-	-	41	0	0.00	51	9	15.00
SCML2	0	genome.wustl.edu	37	X	18275038	18275038	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	X	18275038	18275038	C	G	SNP	SCML2	ENST00000251900	human	ensembl	74_37	-1	known	missense	c.1386	p.L462F	1.000	pfam_DUF3588	pfam_Mbt,pfam_DUF3588,pfam_SAM_type1,superfamily_SAM/pointed,smart_Mbt,smart_SAM,pfscan_Mbt	-	no_errors	SCML2	HGNC	ENSG00000102098				14	0	0.00	27	3	10.00
SEC61A1	0	genome.wustl.edu	37	3	127786785	127786785	+	RNA	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	3	127786785	127786785	C	T	SNP	SEC61A1	ENST00000498837	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SEC61A1	HGNC	ENSG00000058262	tier1	-	-	45	0	0.00	63	9	12.50
SEMA4G	0	genome.wustl.edu	37	10	102739898	102739898	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	10	102739898	102739898	G	T	SNP	SEMA4G	ENST00000210633	human	ensembl	74_37	+1	known	missense	c.1148	p.R383L	0.995	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Ig_sub,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA4G	HGNC	ENSG00000095539				27	0	0.00	35	2	5.41
SEMG2	0	genome.wustl.edu	37	20	43850642	43850642	+	Silent	SNP	T	T	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	20	43850642	43850642	T	C	SNP	SEMG2	ENST00000372769	human	ensembl	74_37	+1	known	silent	c.369	p.F123	0.001	pfam_Semenogelin	pfam_Semenogelin	-	no_errors	SEMG2	HGNC	ENSG00000124157	tier1	-	-	40	0	0.00	50	12	19.35
SERPINA4	0	genome.wustl.edu	37	14	95033361	95033361	+	Missense_Mutation	SNP	T	T	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	14	95033361	95033361	T	A	SNP	SERPINA4	ENST00000298841	human	ensembl	74_37	+1	known	missense	c.704	p.V235D	0.970	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINA4	HGNC	ENSG00000100665	tier1	-	-	77	0	0.00	116	13	10.08
SETBP1	0	genome.wustl.edu	37	18	42532279	42532279	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	18	42532279	42532279	C	T	SNP	SETBP1	ENST00000282030	human	ensembl	74_37	+1	known	missense	c.2974	p.H992Y	1.000	NULL	smart_AT_hook_DNA-bd_motif	-	no_errors	SETBP1	HGNC	ENSG00000152217	tier1	-	-	59	0	0.00	56	6	9.68
SETD2	0	genome.wustl.edu	37	3	47122509	47122509	+	RNA	SNP	G	G	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	3	47122509	47122509	G	T	SNP	SETD2	ENST00000492397	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SETD2	HGNC	ENSG00000181555	tier1	-	-	38	0	0.00	68	4	5.56
SETDB1	0	genome.wustl.edu	37	1	150923931	150923931	+	Silent	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	150923931	150923931	G	A	SNP	SETDB1	ENST00000271640	human	ensembl	74_37	+1	known	silent	c.2304	p.K768	1.000	pfam_Pre-SET_dom,smart_Pre-SET_Zn-bd_sub,pfscan_Pre-SET_dom	pfam_SET_dom,pfam_Pre-SET_dom,pfam_Methyl_CpG_DNA-bd,superfamily_DNA-bd_dom,smart_Tudor,smart_Methyl_CpG_DNA-bd,smart_Pre-SET_Zn-bd_sub,smart_SET_dom,pfscan_Methyl_CpG_DNA-bd,pfscan_SET_dom,pfscan_Pre-SET_dom,pfscan_Post-SET_dom	-	no_errors	SETDB1	HGNC	ENSG00000143379	tier1	-	-	62	0	0.00	95	15	13.64
SIPA1L1	0	genome.wustl.edu	37	14	72055797	72055797	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	14	72055797	72055797	G	C	SNP	SIPA1L1	ENST00000555818	human	ensembl	74_37	+1	known	missense	c.1208	p.G403A	1.000	NULL	pfam_DUF3401,pfam_Rap_GAP_dom,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1L1	HGNC	ENSG00000197555	tier1	-	-	50	0	0.00	95	11	10.19
SLC13A4	0	genome.wustl.edu	37	7	135386446	135386446	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	7	135386446	135386446	C	G	SNP	SLC13A4	ENST00000354042	human	ensembl	74_37	-1	known	missense	c.693	p.K231N	1.000	pfam_Na/sul_symport	pfam_Na/sul_symport,pfam_Cit_transptr-like_dom,pfam_DctM	-	no_errors	SLC13A4	HGNC	ENSG00000164707	tier1	-	-	179	0	0.00	181	30	14.15
SLC16A2	0	genome.wustl.edu	37	X	73749129	73749129	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	X	73749129	73749129	C	G	SNP	SLC16A2	ENST00000276033	human	ensembl	74_37	+1	known	missense	c.1474	p.L492V	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC16A2	HGNC	ENSG00000147100	tier1	-	-	34	0	0.00	55	5	8.33
SLC25A51	0	genome.wustl.edu	37	9	37888332	37888332	+	Silent	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	9	37888332	37888332	C	T	SNP	SLC25A51	ENST00000242275	human	ensembl	74_37	-1	known	silent	c.216	p.L72	0.995	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	-	no_errors	SLC25A51	HGNC	ENSG00000122696	tier1	-	-	68	0	0.00	78	32	29.09
SLC44A4	0	genome.wustl.edu	37	6	31833354	31833354	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	6	31833354	31833354	C	G	SNP	SLC44A4	ENST00000229729	human	ensembl	74_37	-1	known	missense	c.1607	p.C536S	0.999	pfam_Choline_transptr-like	pfam_Choline_transptr-like	-	no_errors	SLC44A4	HGNC	ENSG00000204385	tier1	-	-	39	0	0.00	36	5	11.90
SLC6A13	0	genome.wustl.edu	37	12	330676	330676	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	12	330676	330676	G	T	SNP	SLC6A13	ENST00000343164	human	ensembl	74_37	-1	known	missense	c.1552	p.L518M	0.995	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_GABA_GAT2	-	no_errors	SLC6A13	HGNC	ENSG00000010379				61	0	0.00	64	4	5.88
SLC9A4	0	genome.wustl.edu	37	2	103141509	103141509	+	Silent	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	2	103141509	103141509	C	G	SNP	SLC9A4	ENST00000295269	human	ensembl	74_37	+1	known	silent	c.1845	p.L615	0.038	tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,prints_NaH_exchanger,prints_Na/H_exchanger_2,tigrfam_NaH_exchanger	-	no_errors	SLC9A4	HGNC	ENSG00000180251	tier1	-	-	39	0	0.00	65	7	9.72
SLC9A5	0	genome.wustl.edu	37	16	67292260	67292260	+	Silent	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	16	67292260	67292260	G	A	SNP	SLC9A5	ENST00000299798	human	ensembl	74_37	+1	known	silent	c.1536	p.L512	1.000	tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,prints_Na/H_exchanger_3/5,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A5	HGNC	ENSG00000135740	tier1	-	-	36	0	0.00	62	10	13.89
SLCO2A1	0	genome.wustl.edu	37	3	133664007	133664007	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	3	133664007	133664007	C	G	SNP	SLCO2A1	ENST00000310926	human	ensembl	74_37	-1	known	missense	c.1393	p.E465Q	1.000	pfam_OA_transporter,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO2A1	HGNC	ENSG00000174640	tier1	-	-	41	0	0.00	49	8	14.04
SMG1	0	genome.wustl.edu	37	16	18823362	18823362	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	16	18823362	18823362	G	A	SNP	SMG1	ENST00000389467	human	ensembl	74_37	-1	known	missense	c.10712	p.S3571L	1.000	NULL	pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	SMG1	HGNC	ENSG00000157106	tier1	-	-	47	0	0.00	96	15	13.51
SMIM4	0	genome.wustl.edu	37	3	52613043	52613043	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	3	52613043	52613043	C	T	SNP	SMIM4	ENST00000476842	human	ensembl	74_37	+1	putative	missense	c.161	p.S54L	0.000	NULL	NULL	-	no_errors	SMIM4	HGNC	ENSG00000168273	tier1	-	-	31	0	0.00	26	4	13.33
SNAPIN	0	genome.wustl.edu	37	1	153631615	153631615	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	153631615	153631615	G	C	SNP	SNAPIN	ENST00000368685	human	ensembl	74_37	+1	known	missense	c.145	p.E49Q	1.000	pirsf_Snapin	pirsf_Snapin	-	no_errors	SNAPIN	HGNC	ENSG00000143553	tier1	-	-	51	0	0.00	78	10	11.36
SNHG12	0	genome.wustl.edu	37	1	28907438	28907438	+	RNA	SNP	A	A	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	28907438	28907438	A	G	SNP	SNHG12	ENST00000384342	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SNHG12	HGNC	ENSG00000197989	tier1	-	-	47	0	0.00	52	6	10.34
SNORA72	0	genome.wustl.edu	37	8	99054836	99054837	+	RNA	INS	-	-	AAAA			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	8	99054836	99054837	-	AAAA	INS	SNORA72	ENST00000501016	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.049	-	-	-	no_errors	KB-1208A12.3	Clone_based_vega_gene	ENSG00000245970	tier1			22	0	0.00	34	6	15.00
SOGA2	0	genome.wustl.edu	37	18	8813075	8813075	+	Silent	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	18	8813075	8813075	G	C	SNP	SOGA2	ENST00000359865	human	ensembl	74_37	+1	known	silent	c.2703	p.L901	0.998	NULL	pfam_SOGA	-	no_errors	SOGA2	HGNC	ENSG00000168502				16	0	0.00	25	2	7.41
SP100	0	genome.wustl.edu	37	2	231307706	231307706	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	2	231307706	231307706	C	G	SNP	SP100	ENST00000340126	human	ensembl	74_37	+1	known	missense	c.162	p.F54L	0.000	pfam_Sp100	pfam_Sp100,pfam_SAND_dom,pfam_Bromodomain,superfamily_SAND_dom-like,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_SAND_dom,smart_Znf_PHD,smart_Bromodomain,pfscan_Znf_PHD-finger,pfscan_SAND_dom	-	no_errors	SP100	HGNC	ENSG00000067066	tier1	-	-	53	0	0.00	60	4	6.25
SPAG17	0	genome.wustl.edu	37	1	118596628	118596628	+	Silent	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	118596628	118596628	G	C	SNP	SPAG17	ENST00000336338	human	ensembl	74_37	-1	known	silent	c.2811	p.L937	0.998	NULL	NULL	-	no_errors	SPAG17	HGNC	ENSG00000155761	tier1	-	-	54	0	0.00	90	5	5.26
SPAG9	0	genome.wustl.edu	37	17	49197792	49197792	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	17	49197792	49197792	C	G	SNP	SPAG9	ENST00000262013	human	ensembl	74_37	-1	known	missense	c.226	p.E76Q	1.000	pfam_JNK/Rab-associated_protein-1_N	pfam_JNK/Rab-associated_protein-1_N,superfamily_WD40_repeat_dom	-	no_errors	SPAG9	HGNC	ENSG00000008294				49	0	0.00	62	4	6.06
SPATA3	0	genome.wustl.edu	37	2	231865090	231865090	+	Missense_Mutation	SNP	T	T	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	2	231865090	231865090	T	C	SNP	SPATA3	ENST00000424440	human	ensembl	74_37	+1	known	missense	c.311	p.I104T	0.002	NULL	NULL	-	no_errors	SPATA3	HGNC	ENSG00000173699				44	0	0.00	50	3	5.66
SRSF7	0	genome.wustl.edu	37	2	38973295	38973295	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	2	38973295	38973295	G	C	SNP	SRSF7	ENST00000313117	human	ensembl	74_37	-1	known	missense	c.653	p.P218R	1.000	NULL	pfam_RRM_dom,superfamily_Znf_CCHC,smart_RRM_dom,pfscan_Znf_CCHC,pfscan_RRM_dom	-	no_errors	SRSF7	HGNC	ENSG00000115875	tier1	-	-	46	0	0.00	49	7	12.50
STARD3NL	0	genome.wustl.edu	37	7	38259194	38259194	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	7	38259194	38259194	G	C	SNP	STARD3NL	ENST00000009041	human	ensembl	74_37	+1	known	missense	c.582	p.E194D	1.000	pfam_MENTAL	pfam_MENTAL	-	no_errors	STARD3NL	HGNC	ENSG00000010270	tier1	-	-	73	0	0.00	120	19	13.67
STK31	0	genome.wustl.edu	37	7	23826213	23826213	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	7	23826213	23826213	C	G	SNP	STK31	ENST00000355870	human	ensembl	74_37	+1	known	missense	c.2361	p.D787E	0.955	superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	pfam_Tudor,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Tudor,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Tudor,pfscan_Prot_kinase_dom	-	no_errors	STK31	HGNC	ENSG00000196335	tier1	-	-	56	0	0.00	64	36	35.64
STX17	0	genome.wustl.edu	37	9	102713413	102713413	+	Silent	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	9	102713413	102713413	G	A	SNP	STX17	ENST00000259400	human	ensembl	74_37	+1	known	silent	c.261	p.L87	1.000	superfamily_t-SNARE	pfam_T_SNARE_dom,superfamily_t-SNARE,smart_T_SNARE_dom,pfscan_T_SNARE_dom	-	no_errors	STX17	HGNC	ENSG00000136874	tier1	-	-	39	0	0.00	59	14	19.18
SYNE1	0	genome.wustl.edu	37	6	152644662	152644662	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	6	152644662	152644662	C	G	SNP	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	missense	c.15868	p.E5290Q	0.990	superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018	tier1	-	-	27	0	0.00	38	6	13.64
SYNE2	0	genome.wustl.edu	37	14	64457753	64457753	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	14	64457753	64457753	G	A	SNP	SYNE2	ENST00000358025	human	ensembl	74_37	+1	known	missense	c.2566	p.E856K	0.998	NULL	pfam_CH-domain,pfam_KASH,pfam_Spectrin_repeat,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE2	HGNC	ENSG00000054654	tier1	-	-	29	0	0.00	40	9	18.37
SYNE2	0	genome.wustl.edu	37	14	64469753	64469753	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	14	64469753	64469753	C	T	SNP	SYNE2	ENST00000358025	human	ensembl	74_37	+1	known	missense	c.4102	p.H1368Y	0.000	NULL	pfam_CH-domain,pfam_KASH,pfam_Spectrin_repeat,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE2	HGNC	ENSG00000054654				15	0	0.00	25	3	10.71
TAF4	0	genome.wustl.edu	37	20	60578929	60578929	+	Silent	SNP	G	G	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	20	60578929	60578929	G	T	SNP	TAF4	ENST00000252996	human	ensembl	74_37	-1	known	silent	c.2229	p.I743	0.998	NULL	pfam_TAF4,pfam_TAFH_NHR1,superfamily_Histone-fold,smart_TAFH_NHR1,pfscan_TAFH_NHR1	-	no_errors	TAF4	HGNC	ENSG00000130699	tier1	-	-	53	0	0.00	63	4	5.97
TBC1D19	0	genome.wustl.edu	37	4	26744169	26744169	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	4	26744169	26744169	C	T	SNP	TBC1D19	ENST00000264866	human	ensembl	74_37	+1	known	nonsense	c.1267	p.Q423*	1.000	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D19	HGNC	ENSG00000109680	tier1	-	-	53	0	0.00	50	12	19.35
TBC1D29	0	genome.wustl.edu	37	17	28887700	28887700	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	17	28887700	28887700	G	A	SNP	TBC1D29	ENST00000579181	human	ensembl	74_37	+1	known	missense	c.144	p.M48I	0.997	superfamily_Rab-GTPase-TBC_dom	superfamily_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D29	HGNC	ENSG00000266733	tier1	-	-	86	0	0.00	82	9	9.89
TBP	0	genome.wustl.edu	37	6	170871004	170871004	+	Silent	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	6	170871004	170871004	G	A	SNP	TBP	ENST00000230354	human	ensembl	74_37	+1	known	silent	c.180	p.Q60	0.991	NULL	pfam_TBP,prints_TBP	-	no_errors	TBP	HGNC	ENSG00000112592	tier1	-	-	45	0	0.00	75	12	13.79
TCTE1	0	genome.wustl.edu	37	6	44250020	44250020	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	6	44250020	44250020	C	G	SNP	TCTE1	ENST00000371505	human	ensembl	74_37	-1	known	missense	c.1123	p.E375Q	0.999	smart_Leu-rich_rpt_RNase_inh_sub-typ	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	TCTE1	HGNC	ENSG00000146221	tier1	-	-	31	0	0.00	60	4	6.25
TDP1	0	genome.wustl.edu	37	14	90446926	90446926	+	Silent	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	14	90446926	90446926	C	T	SNP	TDP1	ENST00000335725	human	ensembl	74_37	+1	known	silent	c.834	p.V278	1.000	pfam_Tyr-DNA_phospho	pfam_Tyr-DNA_phospho	-	no_errors	TDP1	HGNC	ENSG00000042088	tier1	-	-	63	0	0.00	91	10	9.90
TEX2	0	genome.wustl.edu	37	17	62290620	62290620	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	17	62290620	62290620	C	A	SNP	TEX2	ENST00000258991	human	ensembl	74_37	-1	known	missense	c.958	p.A320S	1.000	NULL	pfam_DUF2404	-	no_errors	TEX2	HGNC	ENSG00000136478				22	0	0.00	33	3	8.11
TGFB3	0	genome.wustl.edu	37	14	76447096	76447096	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	14	76447096	76447096	G	C	SNP	TGFB3	ENST00000238682	human	ensembl	74_37	-1	known	missense	c.141	p.I47M	1.000	pirsf_TGF-beta,pfam_TGF-b_N	pirsf_TGF-beta,pfam_TGF-b_N,pfam_TGF-b_C,smart_TGF-b_C,prints_Transform_grow_fac_b3,prints_TGF-beta	-	no_errors	TGFB3	HGNC	ENSG00000119699	tier1	-	-	70	0	0.00	100	19	15.97
TIAM1	0	genome.wustl.edu	37	21	32638328	32638328	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	21	32638328	32638328	G	A	SNP	TIAM1	ENST00000286827	human	ensembl	74_37	-1	known	nonsense	c.961	p.Q321*	1.000	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Raf-like_ras-bd,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,smart_Pleckstrin_homology,smart_Raf-like_ras-bd,smart_PDZ,smart_DH-domain,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_Raf-like_ras-bd,pfscan_DH-domain	-	no_errors	TIAM1	HGNC	ENSG00000156299	tier1	-	-	64	0	0.00	106	6	5.36
TMEM105	0	genome.wustl.edu	37	17	79288254	79288254	+	Silent	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	17	79288254	79288254	G	C	SNP	TMEM105	ENST00000332900	human	ensembl	74_37	-1	known	silent	c.9	p.L3	0.014	NULL	NULL	-	no_errors	TMEM105	HGNC	ENSG00000185332	tier1	-	-	51	0	0.00	73	14	16.09
TMEM173	0	genome.wustl.edu	37	5	138860385	138860385	+	Silent	SNP	C	C	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	5	138860385	138860385	C	A	SNP	TMEM173	ENST00000330794	human	ensembl	74_37	-1	known	silent	c.510	p.L170	0.999	NULL	NULL	-	no_errors	TMEM173	HGNC	ENSG00000184584				31	0	0.00	17	3	15.00
TMEM209	0	genome.wustl.edu	37	7	129832592	129832592	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	7	129832592	129832592	C	G	SNP	TMEM209	ENST00000397622	human	ensembl	74_37	-1	known	missense	c.645	p.L215F	1.000	pfam_Cytochrome_B561-rel	pfam_Cytochrome_B561-rel	-	no_errors	TMEM209	HGNC	ENSG00000146842	tier1	-	-	74	0	0.00	70	17	19.54
TMEM71	0	genome.wustl.edu	37	8	133759306	133759306	+	Silent	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	8	133759306	133759306	G	C	SNP	TMEM71	ENST00000377901	human	ensembl	74_37	-1	known	silent	c.369	p.L123	0.004	NULL	NULL	-	no_errors	TMEM71	HGNC	ENSG00000165071	tier1	-	-	67	0	0.00	78	9	10.34
TNFRSF1B	0	genome.wustl.edu	37	1	12251047	12251047	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	12251047	12251047	C	T	SNP	TNFRSF1B	ENST00000376259	human	ensembl	74_37	+1	known	missense	c.212	p.S71L	0.068	pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg	pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg,prints_TNFR_1B	-	no_errors	TNFRSF1B	HGNC	ENSG00000028137	tier1	-	-	32	0	0.00	58	7	10.77
TNRC18	0	genome.wustl.edu	37	7	5396810	5396810	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	7	5396810	5396810	G	A	SNP	TNRC18	ENST00000399537	human	ensembl	74_37	-1	known	missense	c.4931	p.S1644L	1.000	NULL	pfam_BAH_dom,smart_BAH_dom,pfscan_BAH_dom	-	no_errors	TNRC18	HGNC	ENSG00000182095	tier1	-	-	50	0	0.00	94	12	11.32
TOM1L2	0	genome.wustl.edu	37	17	17788081	17788081	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	17	17788081	17788081	G	A	SNP	TOM1L2	ENST00000379504	human	ensembl	74_37	-1	known	missense	c.368	p.A123V	1.000	pfam_VHS,superfamily_ENTH_VHS,smart_VHS_subgr,pirsf_TOM1,pfscan_VHS	pfam_VHS,pfam_GAT,superfamily_ENTH_VHS,smart_VHS_subgr,pirsf_TOM1,pfscan_GAT,pfscan_VHS	-	no_errors	TOM1L2	HGNC	ENSG00000175662				46	0	0.00	63	4	5.97
TP53	0	genome.wustl.edu	37	17	7577094	7577094	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	17	7577094	7577094	G	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.844	p.R282W	0.997	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	rs28934574	-	38	0	0.00	38	14	26.92
TRIM22	0	genome.wustl.edu	37	11	5717813	5717813	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	11	5717813	5717813	G	A	SNP	TRIM22	ENST00000379965	human	ensembl	74_37	+1	known	nonsense	c.351	p.W117*	0.320	pfam_Znf_B-box,smart_Znf_B-box,pfscan_Znf_B-box	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM22	HGNC	ENSG00000132274	tier1	-	-	15	0	0.00	15	4	21.05
TRIM7	0	genome.wustl.edu	37	5	180622300	180622300	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	5	180622300	180622300	C	G	SNP	TRIM7	ENST00000274773	human	ensembl	74_37	-1	known	missense	c.1402	p.E468Q	0.997	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin,prints_Znf_B-box_chordata	-	no_errors	TRIM7	HGNC	ENSG00000146054				18	0	0.00	40	3	6.98
TRMT2A	0	genome.wustl.edu	37	22	20104018	20104018	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	22	20104018	20104018	C	T	SNP	TRMT2A	ENST00000252136	human	ensembl	74_37	-1	known	missense	c.142	p.G48R	0.000	NULL	pfam_U5_MeTrfase,pfam_PCMT,pfam_Small_mtfrase_dom,pfam_RNA_methylase_dom,pfam_RNA_MeTrfase_RsmD,pfam_Methyltransf_11,pfam_tRNA_(Gua-N-7)_MeTrfase,pfam_UbiE/COQ5_MeTrFase,pfscan_RRM_dom	-	no_errors	TRMT2A	HGNC	ENSG00000099899				57	0	0.00	70	4	5.41
TSSC2	0	genome.wustl.edu	37	11	3424843	3424843	+	RNA	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	11	3424843	3424843	G	C	SNP	TSSC2	ENST00000533775	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	TSSC2	HGNC	ENSG00000223756	tier1	-	-	75	0	0.00	74	5	6.33
TTC21B	0	genome.wustl.edu	37	2	166788351	166788351	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	2	166788351	166788351	C	G	SNP	TTC21B	ENST00000243344	human	ensembl	74_37	-1	known	missense	c.811	p.E271Q	0.975	NULL	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC21B	HGNC	ENSG00000123607	tier1	-	-	69	0	0.00	90	12	11.76
TTC30B	0	genome.wustl.edu	37	2	178417447	178417447	+	Silent	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	2	178417447	178417447	G	A	SNP	TTC30B	ENST00000408939	human	ensembl	74_37	-1	known	silent	c.45	p.T15	0.059	pfscan_TPR-contain_dom	smart_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC30B	HGNC	ENSG00000196659	tier1	-	-	53	0	0.00	39	12	23.53
TTN	0	genome.wustl.edu	37	2	179399355	179399355	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	2	179399355	179399355	G	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.94283	p.T31428K	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	79	0	0.00	82	9	9.89
TYR	0	genome.wustl.edu	37	11	88911211	88911211	+	Silent	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	11	88911211	88911211	G	C	SNP	TYR	ENST00000263321	human	ensembl	74_37	+1	known	silent	c.90	p.L30	0.955	NULL	pfam_Tyrosinase,superfamily_Unchr_di-copper_centre,prints_Tyrosinase	-	no_errors	TYR	HGNC	ENSG00000077498				32	0	0.00	35	2	5.41
UBE3C	0	genome.wustl.edu	37	7	156963014	156963014	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	7	156963014	156963014	G	T	SNP	UBE3C	ENST00000348165	human	ensembl	74_37	+1	known	missense	c.212	p.S71I	1.000	pfscan_IQ_motif_EF-hand-BS	pfam_HECT,superfamily_HECT,superfamily_DHFR-like_dom,smart_IQ_motif_EF-hand-BS,smart_HECT,pfscan_HECT,pfscan_IQ_motif_EF-hand-BS	-	no_errors	UBE3C	HGNC	ENSG00000009335				32	0	0.00	55	4	6.78
UNC5C	0	genome.wustl.edu	37	4	96222865	96222865	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	4	96222865	96222865	G	A	SNP	UNC5C	ENST00000453304	human	ensembl	74_37	-1	known	missense	c.382	p.R128C	0.997	NULL	pfam_ZU5,pfam_Death_domain,pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,superfamily_DEATH-like_dom,superfamily_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,smart_Thrombospondin_1_rpt,smart_ZU5,smart_Death_domain,pfscan_Thrombospondin_1_rpt,pfscan_ZU5,pfscan_Ig-like_dom	-	no_errors	UNC5C	HGNC	ENSG00000182168	tier1	-	-	35	0	0.00	36	4	10.00
UPF1	0	genome.wustl.edu	37	19	18972827	18972827	+	Silent	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	19	18972827	18972827	G	A	SNP	UPF1	ENST00000599848	human	ensembl	74_37	+1	known	silent	c.2499	p.E833	0.998	superfamily_P-loop_NTPase	pfam_RNA-helicase_UPF1_UPF2-interct,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase	-	no_errors	UPF1	HGNC	ENSG00000005007	tier1	-	-	24	0	0.00	38	10	20.83
UPF1	0	genome.wustl.edu	37	19	18972858	18972858	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	19	18972858	18972858	G	A	SNP	UPF1	ENST00000599848	human	ensembl	74_37	+1	known	missense	c.2530	p.E844K	0.998	superfamily_P-loop_NTPase	pfam_RNA-helicase_UPF1_UPF2-interct,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase	-	no_errors	UPF1	HGNC	ENSG00000005007	tier1	-	-	23	0	0.00	44	7	13.73
USP35	0	genome.wustl.edu	37	11	77907300	77907300	+	Silent	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	11	77907300	77907300	G	A	SNP	USP35	ENST00000529308	human	ensembl	74_37	+1	known	silent	c.9	p.K3	1.000	NULL	pfam_Peptidase_C19/C67,superfamily_ARM-type_fold,pfscan_Peptidase_C19/C67	-	no_errors	USP35	HGNC	ENSG00000118369				32	0	0.00	60	4	6.25
USP50	0	genome.wustl.edu	37	15	50792993	50792993	+	Silent	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	15	50792993	50792993	G	A	SNP	USP50	ENST00000532404	human	ensembl	74_37	-1	known	silent	c.978	p.F326	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP50	HGNC	ENSG00000170236	tier1	-	-	34	0	0.00	61	5	7.58
VPS13D	0	genome.wustl.edu	37	1	12304375	12304375	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	12304375	12304375	C	T	SNP	VPS13D	ENST00000358136	human	ensembl	74_37	+1	known	missense	c.248	p.S83F	1.000	NULL	pfam_VPSAP_dom,pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	VPS13D	HGNC	ENSG00000048707	tier1	-	-	27	0	0.00	50	12	19.35
WDFY4	0	genome.wustl.edu	37	10	50186394	50186394	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	10	50186394	50186394	G	A	SNP	WDFY4	ENST00000325239	human	ensembl	74_37	+1	known	missense	c.9332	p.R3111Q	0.000	superfamily_WD40_repeat_dom	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDFY4	HGNC	ENSG00000128815				35	0	0.00	23	4	14.81
WDR64	0	genome.wustl.edu	37	1	241943353	241943353	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	1	241943353	241943353	C	T	SNP	WDR64	ENST00000366552	human	ensembl	74_37	+1	known	missense	c.2554	p.H852Y	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR64	HGNC	ENSG00000162843	tier1	-	-	38	0	0.00	59	5	7.81
WISP2	0	genome.wustl.edu	37	20	43353384	43353384	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	20	43353384	43353384	G	C	SNP	WISP2	ENST00000190983	human	ensembl	74_37	+1	known	missense	c.283	p.E95Q	0.239	NULL	pfam_IGFBP-like,pfam_VWF_C,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_IGFBP-like,smart_VWF_C,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt,pfscan_VWF_C	-	no_errors	WISP2	HGNC	ENSG00000064205	tier1	-	-	73	0	0.00	120	13	9.77
XIRP2	0	genome.wustl.edu	37	2	168101829	168101829	+	Silent	SNP	A	A	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	2	168101829	168101829	A	G	SNP	XIRP2	ENST00000295237	human	ensembl	74_37	+1	known	silent	c.3927	p.V1309	1.000	pfam_Actin-binding_Xin_repeat	pfam_Actin-binding_Xin_repeat	-	no_errors	XIRP2	HGNC	ENSG00000163092	tier1	-	-	62	0	0.00	61	9	12.86
XIST	0	genome.wustl.edu	37	X	73065478	73065478	+	RNA	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	X	73065478	73065478	G	C	SNP	XIST	ENST00000429829	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	XIST	HGNC	ENSG00000229807	tier1	-	-	27	0	0.00	43	5	10.42
YAP1	0	genome.wustl.edu	37	11	102094417	102094417	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	11	102094417	102094417	C	G	SNP	YAP1	ENST00000282441	human	ensembl	74_37	+1	known	missense	c.1097	p.S366C	1.000	NULL	pfam_WW_dom,superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	-	no_errors	YAP1	HGNC	ENSG00000137693	tier1	-	-	57	0	0.00	77	16	17.20
YWHAB	0	genome.wustl.edu	37	20	43533668	43533668	+	Missense_Mutation	SNP	A	A	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	20	43533668	43533668	A	G	SNP	YWHAB	ENST00000353703	human	ensembl	74_37	+1	known	missense	c.484	p.M162V	1.000	pfam_14-3-3_domain,superfamily_14-3-3_domain,smart_14-3-3_domain,pirsf_14-3-3,prints_14-3-3	pfam_14-3-3_domain,superfamily_14-3-3_domain,smart_14-3-3_domain,pirsf_14-3-3,prints_14-3-3	-	no_errors	YWHAB	HGNC	ENSG00000166913	tier1	-	-	26	0	0.00	31	21	40.38
ZMYM3	0	genome.wustl.edu	37	X	70471431	70471431	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	X	70471431	70471431	C	T	SNP	ZMYM3	ENST00000373988	human	ensembl	74_37	-1	known	missense	c.688	p.A230T	0.881	NULL	pfam_Znf_MYM,pfam_DUF3504,smart_TRASH_dom	-	no_errors	ZMYM3	HGNC	ENSG00000147130	tier1	-	-	18	0	0.00	20	20	50.00
ZNF143	0	genome.wustl.edu	37	11	9522726	9522728	+	In_Frame_Del	DEL	AGG	AGG	-			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	11	9522726	9522728	AGG	-	DEL	ZNF143	ENST00000396602	human	ensembl	74_37	+1	known	in_frame_del	c.1056_1058	p.G353in_frame_del	0.999:1.000:1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF143	HGNC	ENSG00000166478	tier1			34	0	0.00	68	9	11.69
ZNF213	0	genome.wustl.edu	37	16	3190882	3190882	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	16	3190882	3190882	G	A	SNP	ZNF213	ENST00000396878	human	ensembl	74_37	+1	known	missense	c.914	p.R305Q	0.875	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF213	HGNC	ENSG00000085644	tier1	-	-	10	0	0.00	15	5	23.81
ZNF311	0	genome.wustl.edu	37	6	28963076	28963076	+	Nonsense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	6	28963076	28963076	G	C	SNP	ZNF311	ENST00000377179	human	ensembl	74_37	-1	known	nonsense	c.1703	p.S568*	0.002	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF311	HGNC	ENSG00000197935	tier1	-	-	32	0	0.00	58	11	15.94
ZNF438	0	genome.wustl.edu	37	10	31138696	31138696	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	10	31138696	31138696	C	G	SNP	ZNF438	ENST00000361310	human	ensembl	74_37	-1	known	missense	c.638	p.S213T	0.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF438	HGNC	ENSG00000183621	tier1	-	-	85	0	0.00	88	8	8.33
ZNF518A	0	genome.wustl.edu	37	10	97918367	97918367	+	RNA	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	10	97918367	97918367	G	C	SNP	ZNF518A	ENST00000316045	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ZNF518A	HGNC	ENSG00000177853	tier1	-	-	19	0	0.00	38	8	17.39
ZNF585B	0	genome.wustl.edu	37	19	37680968	37680968	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	19	37680968	37680968	G	C	SNP	ZNF585B	ENST00000532828	human	ensembl	74_37	-1	known	missense	c.157	p.R53G	0.882	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF585B	HGNC	ENSG00000245680				58	0	0.00	112	6	5.04
ZNF700	0	genome.wustl.edu	37	19	12059541	12059541	+	Silent	SNP	C	C	T			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	19	12059541	12059541	C	T	SNP	ZNF700	ENST00000254321	human	ensembl	74_37	+1	known	silent	c.702	p.F234	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF700	HGNC	ENSG00000196757	tier1	-	-	39	0	0.00	66	5	7.04
ZNF804B	0	genome.wustl.edu	37	7	88963860	88963860	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3Y9-01A-12D-A247-09	TCGA-IG-A3Y9-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d490dc67-08e6-4d8e-b641-c405b20d86e1	98880f6a-bdae-4313-8eff-525d22ab97a5	7	88963860	88963860	G	C	SNP	ZNF804B	ENST00000333190	human	ensembl	74_37	+1	known	missense	c.1564	p.D522H	1.000	NULL	pfam_Znf_C2H2_jaz	-	no_errors	ZNF804B	HGNC	ENSG00000182348	tier1	-	-	38	0	0.00	27	4	12.90
