Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ABHD16A	0	genome.wustl.edu	37	6	31668752	31668752	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	6	31668752	31668752	G	T	SNP	ABHD16A	ENST00000538874	human	ensembl	74_37	-1	known	nonsense	c.15	p.C5*	1.000	NULL	NULL	-	no_errors	ABHD16A	HGNC	ENSG00000204427	tier1	-	-	95	0	0.00	52	4	7.14
ABHD16B	0	genome.wustl.edu	37	20	62493609	62493609	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	20	62493609	62493609	C	T	SNP	ABHD16B	ENST00000369916	human	ensembl	74_37	+1	known	missense	c.716	p.A239V	0.002	pfam_AB_hydrolase_1	pfam_AB_hydrolase_1	-	no_errors	ABHD16B	HGNC	ENSG00000183260	tier1	-	-	42	0	0.00	21	7	25.00
ACACB	0	genome.wustl.edu	37	12	109702980	109702980	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	12	109702980	109702980	G	C	SNP	ACACB	ENST00000338432	human	ensembl	74_37	+1	known	missense	c.7008	p.E2336D	1.000	NULL	pfam_AcCoA_COase_cen,pfam_Carboxyl_trans,pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_lsu_N,pfam_Biotin_COase_C,pfam_Biotin_lipoyl,superfamily_PreATP-grasp_dom,superfamily_Rudment_hybrid_motif,superfamily_Single_hybrid_motif,smart_Biotin_COase_C,pfscan_ATP-grasp,pfscan_Biotin_carboxylation_dom,pfscan_COA_CT_N,pfscan_COA_CT_C,pfscan_Biotin_lipoyl	-	no_errors	ACACB	HGNC	ENSG00000076555	tier1	-	-	82	0	0.00	25	11	30.56
AGPAT4	0	genome.wustl.edu	37	6	161653159	161653159	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	6	161653159	161653159	G	T	SNP	AGPAT4	ENST00000320285	human	ensembl	74_37	-1	known	missense	c.87	p.N29K	1.000	NULL	pfam_Plipid/glycerol_acylTrfase,smart_Plipid/glycerol_acylTrfase	-	no_errors	AGPAT4	HGNC	ENSG00000026652	tier1	-	-	52	0	0.00	29	4	12.12
ANAPC1	0	genome.wustl.edu	37	2	112620071	112620071	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	2	112620071	112620071	G	C	SNP	ANAPC1	ENST00000341068	human	ensembl	74_37	-1	known	missense	c.1157	p.S386C	1.000	NULL	NULL	-	no_errors	ANAPC1	HGNC	ENSG00000153107				122	0	0.00	66	4	5.63
AP3B1	0	genome.wustl.edu	37	5	77511947	77511947	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	5	77511947	77511947	C	G	SNP	AP3B1	ENST00000255194	human	ensembl	74_37	-1	known	missense	c.718	p.G240R	1.000	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP3_beta	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP3_beta	-	no_errors	AP3B1	HGNC	ENSG00000132842	tier1	-	-	71	0	0.00	37	10	21.28
APH1A	0	genome.wustl.edu	37	1	150238905	150238905	+	RNA	SNP	G	G	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	1	150238905	150238905	G	A	SNP	APH1A	ENST00000461320	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	APH1A	HGNC	ENSG00000117362	tier1	-	-	95	0	0.00	47	6	11.32
ARMC3	0	genome.wustl.edu	37	10	23292215	23292215	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	10	23292215	23292215	C	T	SNP	ARMC3	ENST00000298032	human	ensembl	74_37	+1	known	missense	c.1603	p.R535W	0.995	NULL	pfam_Armadillo,pfam_HEAT,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	ARMC3	HGNC	ENSG00000165309	tier1	rs148669748	-	56	0	0.00	25	11	30.56
ASNS	0	genome.wustl.edu	37	7	97481609	97481609	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	7	97481609	97481609	G	C	SNP	ASNS	ENST00000175506	human	ensembl	74_37	-1	known	missense	c.1648	p.R550G	1.000	NULL	pfam_Asn_synthase,pfam_GATase_dom,tigrfam_Asn_synth_AEB	-	no_errors	ASNS	HGNC	ENSG00000070669	tier1	-	-	54	0	0.00	85	5	5.56
B4GALT6	0	genome.wustl.edu	37	18	29210978	29210978	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	18	29210978	29210978	G	T	SNP	B4GALT6	ENST00000306851	human	ensembl	74_37	-1	known	nonsense	c.720	p.Y240*	0.340	pfam_Galactosyl_T_C,prints_Galactosyl_T	pfam_Galactosyl_T_C,prints_Galactosyl_T	-	no_errors	B4GALT6	HGNC	ENSG00000118276	tier1	-	-	82	0	0.00	31	8	20.51
C6orf118	0	genome.wustl.edu	37	6	165715349	165715349	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	6	165715349	165715349	C	G	SNP	C6orf118	ENST00000230301	human	ensembl	74_37	-1	known	missense	c.462	p.E154D	0.000	superfamily_Ribonuclease/ribotoxin	superfamily_Ribonuclease/ribotoxin	-	no_errors	C6orf118	HGNC	ENSG00000112539	tier1	-	-	62	0	0.00	24	7	22.58
CACNA2D1	0	genome.wustl.edu	37	7	81964469	81964469	+	Silent	SNP	G	G	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	7	81964469	81964469	G	A	SNP	CACNA2D1	ENST00000356253	human	ensembl	74_37	-1	known	silent	c.276	p.N92	1.000	NULL	pfam_VDCC_a2/dsu,pfam_VWA_N,pfam_Cache_domain,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	CACNA2D1	HGNC	ENSG00000153956	tier1	-	-	80	0	0.00	37	8	17.78
CAMSAP2	0	genome.wustl.edu	37	1	200730051	200730051	+	Missense_Mutation	SNP	T	T	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	1	200730051	200730051	T	A	SNP	CAMSAP2	ENST00000236925	human	ensembl	74_37	+1	known	missense	c.224	p.L75H	1.000	NULL	pfam_CKK_domain,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_PRC_barrel-like,superfamily_CH-domain	-	no_errors	CAMSAP2	HGNC	ENSG00000118200	tier1	-	-	50	0	0.00	31	6	16.22
CCDC88B	0	genome.wustl.edu	37	11	64111870	64111870	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	11	64111870	64111870	G	T	SNP	CCDC88B	ENST00000356786	human	ensembl	74_37	+1	known	missense	c.1857	p.L619F	0.000	NULL	pfam_Hook-related_fam	-	no_errors	CCDC88B	HGNC	ENSG00000168071	tier1	-	-	103	0	0.00	43	4	8.51
CD93	0	genome.wustl.edu	37	20	23066567	23066567	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	20	23066567	23066567	G	T	SNP	CD93	ENST00000246006	human	ensembl	74_37	-1	known	missense	c.263	p.A88E	0.000	pirsf_CD93/CD141,pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pirsf_CD93/CD141,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,pfam_C-type_lectin,superfamily_C-type_lectin_fold,superfamily_MFS_dom_general_subst_transpt,smart_C-type_lectin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_C-type_lectin	-	no_errors	CD93	HGNC	ENSG00000125810	tier1	-	-	122	0	0.00	73	4	5.19
CEP152	0	genome.wustl.edu	37	15	49083507	49083507	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	15	49083507	49083507	C	G	SNP	CEP152	ENST00000380950	human	ensembl	74_37	-1	known	missense	c.899	p.R300T	1.000	NULL	NULL	-	no_errors	CEP152	HGNC	ENSG00000103995	tier1	-	-	95	0	0.00	48	4	7.69
CHAC2	0	genome.wustl.edu	37	2	54001489	54001489	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	2	54001489	54001489	G	T	SNP	CHAC2	ENST00000295304	human	ensembl	74_37	+1	known	missense	c.382	p.A128S	1.000	pfam_ChaC	pfam_ChaC	-	no_errors	CHAC2	HGNC	ENSG00000143942	tier1	-	-	66	0	0.00	25	3	10.71
CHRM3	0	genome.wustl.edu	37	1	240072404	240072404	+	Silent	SNP	C	C	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	1	240072404	240072404	C	T	SNP	CHRM3	ENST00000255380	human	ensembl	74_37	+1	known	silent	c.1653	p.F551	1.000	prints_Musac_Ach_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Musac_Ach_M3_rcpt,prints_Musac_Ach_rcpt,prints_GPCR_Rhodpsn	-	no_errors	CHRM3	HGNC	ENSG00000133019	tier1	-	-	79	0	0.00	50	9	15.25
CNTNAP4	0	genome.wustl.edu	37	16	76461364	76461364	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	16	76461364	76461364	G	T	SNP	CNTNAP4	ENST00000307431	human	ensembl	74_37	+1	known	missense	c.403	p.A135S	1.000	pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP4	HGNC	ENSG00000152910	tier1	-	-	92	0	0.00	45	4	8.16
COL5A3	0	genome.wustl.edu	37	19	10083616	10083616	+	Silent	SNP	C	C	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	19	10083616	10083616	C	T	SNP	COL5A3	ENST00000264828	human	ensembl	74_37	-1	known	silent	c.3753	p.E1251	1.000	NULL	pfam_Collagen,pfam_Fib_collagen_C,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL5A3	HGNC	ENSG00000080573	tier1	-	-	84	0	0.00	45	12	21.05
CPT2	0	genome.wustl.edu	37	1	53675749	53675749	+	Missense_Mutation	SNP	A	A	G			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	1	53675749	53675749	A	G	SNP	CPT2	ENST00000371486	human	ensembl	74_37	+1	known	missense	c.403	p.M135V	1.000	pfam_Carn_acyl_trans	pfam_Carn_acyl_trans	-	no_errors	CPT2	HGNC	ENSG00000157184				58	0	0.00	32	3	8.57
DACH2	0	genome.wustl.edu	37	X	85997699	85997699	+	Missense_Mutation	SNP	A	A	C			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	X	85997699	85997699	A	C	SNP	DACH2	ENST00000461604	human	ensembl	74_37	+1	known	missense	c.1294	p.T432P	0.954	NULL	pfam_Transform_Ski,superfamily_DNA-bd_dom_put	-	no_errors	DACH2	HGNC	ENSG00000126733	tier1	-	-	74	0	0.00	29	6	17.14
DEPDC1B	0	genome.wustl.edu	37	5	59982979	59982979	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	5	59982979	59982979	G	T	SNP	DEPDC1B	ENST00000265036	human	ensembl	74_37	-1	known	missense	c.124	p.H42N	0.086	pfam_DEP_dom,smart_DEP_dom,pfscan_DEP_dom	pfam_DEP_dom,pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_DEP_dom,pfscan_DEP_dom,pfscan_RhoGAP_dom	-	no_errors	DEPDC1B	HGNC	ENSG00000035499				64	0	0.00	42	3	6.67
DHX37	0	genome.wustl.edu	37	12	125434711	125434711	+	Missense_Mutation	SNP	A	A	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	12	125434711	125434711	A	T	SNP	DHX37	ENST00000308736	human	ensembl	74_37	-1	known	missense	c.3200	p.F1067Y	1.000	NULL	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_T2SS_protein-E,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX37	HGNC	ENSG00000150990	tier1	-	-	150	0	0.00	75	6	7.41
DNM1P47	0	genome.wustl.edu	37	15	102304719	102304719	+	RNA	SNP	C	C	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	15	102304719	102304719	C	A	SNP	DNM1P47	ENST00000561463	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.990	-	-	-	no_errors	DNM1P47	HGNC	ENSG00000259660	tier1	-	-	80	0	0.00	34	4	10.53
DXO	0	genome.wustl.edu	37	6	31939108	31939108	+	Silent	SNP	G	G	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	6	31939108	31939108	G	T	SNP	DXO	ENST00000337523	human	ensembl	74_37	-1	known	silent	c.345	p.G115	0.998	NULL	pfam_RAI1	-	no_errors	DXO	HGNC	ENSG00000204348				101	0	0.00	57	4	6.56
DYRK1B	0	genome.wustl.edu	37	19	40319120	40319120	+	Silent	SNP	G	G	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	19	40319120	40319120	G	A	SNP	DYRK1B	ENST00000323039	human	ensembl	74_37	-1	known	silent	c.624	p.G208	0.190	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	DYRK1B	HGNC	ENSG00000105204				59	0	0.00	36	3	7.69
EDIL3	0	genome.wustl.edu	37	5	83239272	83239272	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	5	83239272	83239272	C	T	SNP	EDIL3	ENST00000296591	human	ensembl	74_37	-1	known	missense	c.1409	p.R470Q	1.000	pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	pfam_Coagulation_fac_5/8-C_type_dom,pfam_EG-like_dom,pfam_EGF_extracell,superfamily_Galactose-bd-like,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Coagulation_fac_5/8-C_type_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	EDIL3	HGNC	ENSG00000164176	tier1	-	-	152	0	0.00	67	6	8.22
ENSG00000173213	0	genome.wustl.edu	37	18	49110	49110	+	Missense_Mutation	SNP	A	A	G			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	18	49110	49110	A	G	SNP	ENSG00000173213	ENST00000573909	human	ensembl	74_37	-1	putative	missense	c.109	p.S37P	0.863	smart_Tubulin_FtsZ_GTPase	pfam_Tubulin/FtsZ_2-layer-sand-dom,pfam_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,superfamily_Tubulin_FtsZ_GTPase,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Gamma_tubulin,prints_Delta_tubulin	-	no_errors	RP11-683L23.1	Clone_based_vega_gene	ENSG00000173213	tier1	rs62075714	-	47	0	0.00	27	7	20.59
ENSG00000199959	0	genome.wustl.edu	37	1	84743069	84743069	+	RNA	SNP	G	G	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	1	84743069	84743069	G	A	SNP	ENSG00000199959	ENST00000363089	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.986	-	-	-	no_errors	SNORA2	RFAM	ENSG00000199959	tier1	-	-	16	0	0.00	13	4	23.53
ENSG00000249428	0	genome.wustl.edu	37	4	2451713	2451713	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	4	2451713	2451713	C	A	SNP	ENSG00000249428	ENST00000506607	human	ensembl	74_37	+1	putative	missense	c.11	p.S4Y	0.003	NULL	NULL	-	no_errors	RP11-503N18.3	Clone_based_vega_gene	ENSG00000249428	tier1	-	-	94	0	0.00	44	4	8.33
ENSG00000251273	0	genome.wustl.edu	37	5	25190700	25190700	+	RNA	SNP	G	G	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	5	25190700	25190700	G	A	SNP	ENSG00000251273	ENST00000507600	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.013	-	-	-	no_errors	RP11-549K20.1	Clone_based_vega_gene	ENSG00000251273	tier1	-	-	34	0	0.00	22	6	21.43
ENSG00000255622	0	genome.wustl.edu	37	5	140537168	140537168	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	5	140537168	140537168	G	A	SNP	ENSG00000255622	ENST00000539533	human	ensembl	74_37	+1	known	missense	c.1592	p.R531H	0.001	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB17	Uniprot_gn	ENSG00000255622	tier1	-	-	251	0	0.00	125	7	5.30
EPB41L3	0	genome.wustl.edu	37	18	5428401	5428401	+	Silent	SNP	G	G	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	18	5428401	5428401	G	T	SNP	EPB41L3	ENST00000341928	human	ensembl	74_37	-1	known	silent	c.976	p.R326	1.000	pirsf_Band_41_protein,pfam_FERM_PH-like_C,pfscan_FERM_domain	pirsf_Band_41_protein,pfam_Band_4.1_C,pfam_SAB_dom,pfam_FERM_N,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	EPB41L3	HGNC	ENSG00000082397				67	0	0.00	35	3	7.89
ERV3-1	0	genome.wustl.edu	37	7	64452476	64452476	+	Missense_Mutation	SNP	T	T	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	7	64452476	64452476	T	A	SNP	ERV3-1	ENST00000394323	human	ensembl	74_37	-1	known	missense	c.929	p.E310V	0.158	NULL	NULL	-	no_errors	ERV3-1	HGNC	ENSG00000213462	tier1	-	-	107	0	0.00	53	11	17.19
EYS	0	genome.wustl.edu	37	6	65146103	65146103	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	6	65146103	65146103	C	T	SNP	EYS	ENST00000370616	human	ensembl	74_37	-1	known	missense	c.5891	p.R1964K	0.926	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	EYS	HGNC	ENSG00000188107	tier1	-	-	71	0	0.00	36	8	18.18
EYS	0	genome.wustl.edu	37	6	66200582	66200582	+	Missense_Mutation	SNP	A	A	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	6	66200582	66200582	A	T	SNP	EYS	ENST00000370616	human	ensembl	74_37	-1	known	missense	c.767	p.I256K	1.000	pfscan_EG-like_dom	pfam_Laminin_G,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	EYS	HGNC	ENSG00000188107	tier1	-	-	74	0	0.00	38	8	17.39
FAM160A2	0	genome.wustl.edu	37	11	6239886	6239886	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	11	6239886	6239886	C	G	SNP	FAM160A2	ENST00000265978	human	ensembl	74_37	-1	known	missense	c.1379	p.C460S	1.000	NULL	pfam_RetinoicA-induced_16-like	-	no_errors	FAM160A2	HGNC	ENSG00000051009				64	0	0.00	32	3	8.57
FAM83E	0	genome.wustl.edu	37	19	49113245	49113245	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	19	49113245	49113245	G	A	SNP	FAM83E	ENST00000263266	human	ensembl	74_37	-1	known	missense	c.646	p.R216C	0.970	pfam_DUF1669	pfam_DUF1669,superfamily_Acyl_CoA_acyltransferase	-	no_errors	FAM83E	HGNC	ENSG00000105523	tier1	-	-	81	0	0.00	36	17	32.08
FGF14	0	genome.wustl.edu	37	13	102379101	102379101	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	13	102379101	102379101	G	C	SNP	FGF14	ENST00000376131	human	ensembl	74_37	-1	known	missense	c.483	p.I161M	1.000	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	-	no_errors	FGF14	HGNC	ENSG00000102466	tier1	-	-	78	0	0.00	43	15	25.86
FMN1	0	genome.wustl.edu	37	15	33066543	33066543	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	15	33066543	33066543	G	A	SNP	FMN1	ENST00000334528	human	ensembl	74_37	-1	known	missense	c.3559	p.R1187C	1.000	prints_Formin_Cappuccino_subfam	pfam_FH2_Formin,smart_FH2_Formin,prints_Formin_Cappuccino_subfam	-	no_errors	FMN1	HGNC	ENSG00000248905	tier1	-	-	96	0	0.00	24	9	27.27
GABPB1	0	genome.wustl.edu	37	15	50596184	50596184	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	15	50596184	50596184	G	T	SNP	GABPB1	ENST00000220429	human	ensembl	74_37	-1	known	missense	c.255	p.S85R	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	GABPB1	HGNC	ENSG00000104064				80	0	0.00	34	3	8.11
GBP1	0	genome.wustl.edu	37	1	89523677	89523677	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	1	89523677	89523677	G	T	SNP	GBP1	ENST00000370473	human	ensembl	74_37	-1	known	missense	c.872	p.P291H	0.876	pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C	pfam_Guanylate-bd_C,pfam_Guanylate-bd_N,superfamily_Guanylate-bd_C,superfamily_P-loop_NTPase	-	no_errors	GBP1	HGNC	ENSG00000117228				52	0	0.00	30	3	9.09
GDF3	0	genome.wustl.edu	37	12	7842645	7842645	+	Silent	SNP	G	G	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	12	7842645	7842645	G	A	SNP	GDF3	ENST00000329913	human	ensembl	74_37	-1	known	silent	c.924	p.S308	1.000	pfam_TGF-b_C,smart_TGF-b_C	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C,prints_Inhibin_asu	-	no_errors	GDF3	HGNC	ENSG00000184344	tier1	-	-	75	0	0.00	41	6	12.77
GH2	0	genome.wustl.edu	37	17	61958788	61958788	+	Silent	SNP	C	C	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	17	61958788	61958788	C	T	SNP	GH2	ENST00000332800	human	ensembl	74_37	-1	known	silent	c.102	p.R34	1.000	pfam_Somatotropin,superfamily_4_helix_cytokine-like_core	pfam_Somatotropin,superfamily_4_helix_cytokine-like_core,prints_Somatotropin	-	no_errors	GH2	HGNC	ENSG00000136487	tier1	-	-	86	0	0.00	35	5	12.50
GJE1	0	genome.wustl.edu	37	6	142455065	142455065	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	6	142455065	142455065	G	C	SNP	GJE1	ENST00000450456	human	ensembl	74_37	+1	known	missense	c.118	p.G40R	1.000	pfam_Connexin_N	pfam_Connexin_CCC,pfam_Connexin_N	-	no_errors	GJE1	HGNC	ENSG00000203733	tier1	-	-	148	0	0.00	63	20	24.10
GPR126	0	genome.wustl.edu	37	6	142723827	142723827	+	Silent	SNP	T	T	C			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	6	142723827	142723827	T	C	SNP	GPR126	ENST00000367609	human	ensembl	74_37	+1	known	silent	c.1815	p.N605	0.998	NULL	pfam_GPCR_2_secretin-like,pfam_CUB_dom,pfam_GPS_dom,pfam_Pentaxin,superfamily_CUB_dom,superfamily_ConA-like_lec_gl_sf,smart_CUB_dom,smart_Pentaxin,smart_GPS_dom,pfscan_CUB_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	-	no_errors	GPR126	HGNC	ENSG00000112414	tier1	-	-	41	0	0.00	19	7	26.92
GRAMD1B	0	genome.wustl.edu	37	11	123480536	123480536	+	Missense_Mutation	SNP	A	A	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	11	123480536	123480536	A	T	SNP	GRAMD1B	ENST00000322282	human	ensembl	74_37	+1	known	missense	c.1262	p.N421I	0.282	NULL	pfam_GRAM,smart_GRAM	-	no_errors	GRAMD1B	HGNC	ENSG00000023171	tier1	-	-	98	0	0.00	35	8	18.60
GUCY2D	0	genome.wustl.edu	37	17	7919550	7919550	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	17	7919550	7919550	C	A	SNP	GUCY2D	ENST00000254854	human	ensembl	74_37	+1	known	missense	c.3166	p.L1056I	1.000	pfam_A/G_cyclase,superfamily_A/G_cyclase	pfam_A/G_cyclase,pfam_ANF_lig-bd_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Haem_no_assoc-bd,superfamily_Peripla_BP_I,superfamily_A/G_cyclase,superfamily_Kinase-like_dom,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_A/G_cyclase,pfscan_Prot_kinase_dom,pfscan_A/G_cyclase,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	GUCY2D	HGNC	ENSG00000132518	tier1	-	-	96	0	0.00	48	13	21.31
H3F3B	0	genome.wustl.edu	37	17	73774199	73774200	+	RNA	INS	-	-	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	17	73774199	73774200	-	T	INS	H3F3B	ENST00000593254	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.995:1.000	-	-	-	no_errors	H3F3B	HGNC	ENSG00000132475	tier1			43	0	0.00	28	5	15.15
HCFC1	0	genome.wustl.edu	37	X	153220290	153220290	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	X	153220290	153220290	C	A	SNP	HCFC1	ENST00000310441	human	ensembl	74_37	-1	known	missense	c.3560	p.C1187F	0.058	NULL	pfam_Kelch_2,pfam_Kelch_1,superfamily_Fibronectin_type3,smart_Fibronectin_type3	-	no_errors	HCFC1	HGNC	ENSG00000172534	tier1	-	-	13	0	0.00	10	4	28.57
HEATR5A	0	genome.wustl.edu	37	14	31774121	31774121	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	14	31774121	31774121	G	C	SNP	HEATR5A	ENST00000389961	human	ensembl	74_37	-1	known	missense	c.5211	p.C1737W	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	HEATR5A	HGNC	ENSG00000129493	tier1	-	-	43	0	0.00	24	7	22.58
HIST1H3B	0	genome.wustl.edu	37	6	26031995	26031995	+	Silent	SNP	C	C	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	6	26031995	26031995	C	T	SNP	HIST1H3B	ENST00000244661	human	ensembl	74_37	-1	known	silent	c.294	p.E98	1.000	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	-	no_errors	HIST1H3B	HGNC	ENSG00000124693	tier1	-	-	120	0	0.00	70	6	7.89
HLA-J	0	genome.wustl.edu	37	6	29974769	29974769	+	RNA	SNP	T	T	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	6	29974769	29974769	T	A	SNP	HLA-J	ENST00000462773	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	HLA-J	HGNC	ENSG00000204622	tier1	-	-	156	0	0.00	50	24	32.43
HNRNPU	0	genome.wustl.edu	37	1	245025801	245025803	+	In_Frame_Del	DEL	TCT	TCT	-			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	TCT	TCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	1	245025801	245025803	TCT	-	DEL	HNRNPU	ENST00000283179	human	ensembl	74_37	-1	known	in_frame_del	c.839_837	p.E279in_frame_del	1.000:1.000:1.000	superfamily_ConA-like_lec_gl_sf,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,pfam_SAP_dom,pfam_Zeta_toxin_domain,superfamily_ConA-like_lec_gl_sf,superfamily_P-loop_NTPase,smart_SAP_dom,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_SAP_dom	-	no_errors	HNRNPU	HGNC	ENSG00000153187	tier1			128	0	0.00	71	13	15.48
HSPB7	0	genome.wustl.edu	37	1	16342202	16342202	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	1	16342202	16342202	G	A	SNP	HSPB7	ENST00000487046	human	ensembl	74_37	-1	known	missense	c.401	p.P134L	0.997	pfam_a-crystallin/Hsp20_dom,superfamily_HSP20-like_chaperone,pfscan_a-crystallin/Hsp20_dom	pfam_a-crystallin/Hsp20_dom,superfamily_HSP20-like_chaperone,pfscan_a-crystallin/Hsp20_dom,prints_Alpha-crystallin/HSP	-	no_errors	HSPB7	HGNC	ENSG00000173641	tier1	-	-	71	0	0.00	45	9	16.67
HYOU1	0	genome.wustl.edu	37	11	118922241	118922241	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	11	118922241	118922241	G	A	SNP	HYOU1	ENST00000404233	human	ensembl	74_37	-1	known	missense	c.1435	p.R479C	1.000	pfam_Hsp_70_fam	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HYOU1	HGNC	ENSG00000149428	tier1	rs139920723	-	165	0	0.00	68	6	8.11
IL7R	0	genome.wustl.edu	37	5	35876573	35876573	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	5	35876573	35876573	C	G	SNP	IL7R	ENST00000303115	human	ensembl	74_37	+1	known	missense	c.1365	p.F455L	1.000	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3	-	no_errors	IL7R	HGNC	ENSG00000168685	tier1	-	-	75	0	0.00	61	7	10.29
KRTAP4-3	0	genome.wustl.edu	37	17	39324398	39324398	+	Silent	SNP	G	G	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	17	39324398	39324398	G	A	SNP	KRTAP4-3	ENST00000391356	human	ensembl	74_37	-1	known	silent	c.27	p.V9	0.656	pfam_Keratin-assoc	pfam_Keratin-assoc	-	no_errors	KRTAP4-3	HGNC	ENSG00000196156	tier1	-	-	186	0	0.00	80	21	20.59
LOC100506060	0	genome.wustl.edu	37	16	70253716	70253716	+	RNA	SNP	T	T	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	16	70253716	70253716	T	A	SNP	LOC100506060	ENST00000573141	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.109	-	-	-	no_errors	RP11-296I10.6	Clone_based_vega_gene	ENSG00000261556	tier1	rs145600612	-	75	0	0.00	68	8	10.39
LRP1B	0	genome.wustl.edu	37	2	141665564	141665564	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	2	141665564	141665564	G	T	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	missense	c.3402	p.F1134L	0.726	superfamily_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	tier1	-	-	60	0	0.00	15	4	21.05
LRRC56	0	genome.wustl.edu	37	11	550123	550123	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	11	550123	550123	C	A	SNP	LRRC56	ENST00000270115	human	ensembl	74_37	+1	known	missense	c.475	p.L159M	1.000	NULL	NULL	-	no_errors	LRRC56	HGNC	ENSG00000161328	tier1	-	-	109	0	0.00	45	8	15.09
MED12L	0	genome.wustl.edu	37	3	150883635	150883635	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	3	150883635	150883635	G	C	SNP	MED12L	ENST00000474524	human	ensembl	74_37	+1	known	missense	c.1360	p.V454L	1.000	pfam_Mediator_Med12_LCEWAV	pfam_Mediator_Med12_LCEWAV,pfam_Mediator_Med12,pfam_Mediator_Med12_catenin-bd	-	no_errors	MED12L	HGNC	ENSG00000144893	tier1	-	-	97	0	0.00	32	4	11.11
MGST3	0	genome.wustl.edu	37	1	165620279	165620279	+	Missense_Mutation	SNP	A	A	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	1	165620279	165620279	A	T	SNP	MGST3	ENST00000367886	human	ensembl	74_37	+1	known	missense	c.188	p.E63V	1.000	pfam_Membr-assoc_MAPEG	pfam_Membr-assoc_MAPEG	-	no_errors	MGST3	HGNC	ENSG00000143198	tier1	-	-	124	0	0.00	67	11	14.10
MPP5	0	genome.wustl.edu	37	14	67799567	67799567	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	14	67799567	67799567	C	T	SNP	MPP5	ENST00000261681	human	ensembl	74_37	+1	known	missense	c.1922	p.T641M	0.999	pfam_GK/Ca_channel_bsu,superfamily_P-loop_NTPase,smart_GK/Ca_channel_bsu,pfscan_Guanylate_kin-like	pfam_GK/Ca_channel_bsu,pfam_L27_N,pfam_SH3_2,pfam_PDZ,pfam_SH3_domain,pfam_L27_C,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_L27,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	MPP5	HGNC	ENSG00000072415	tier1	-	-	67	0	0.00	41	4	8.89
MYB	0	genome.wustl.edu	37	6	135539216	135539216	+	RNA	SNP	C	C	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	6	135539216	135539216	C	A	SNP	MYB	ENST00000531845	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.899	-	-	-	no_errors	MYB	HGNC	ENSG00000118513	tier1	-	-	70	0	0.00	28	4	12.50
MYO9A	0	genome.wustl.edu	37	15	72190310	72190310	+	Missense_Mutation	SNP	T	T	C			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	15	72190310	72190310	T	C	SNP	MYO9A	ENST00000424560	human	ensembl	74_37	-1	known	missense	c.4534	p.M1512V	1.000	NULL	pfam_Myosin_head_motor_dom,pfam_RhoGAP_dom,pfam_Ras-assoc,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Rho_GTPase_activation_prot,smart_Ras-assoc,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_IQ_motif_EF-hand-BS,pfscan_Ras-assoc,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO9A	HGNC	ENSG00000066933	tier1	-	-	169	0	0.00	89	7	7.29
NAP1L3	0	genome.wustl.edu	37	X	92927199	92927199	+	Silent	SNP	T	T	G			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	X	92927199	92927199	T	G	SNP	NAP1L3	ENST00000373079	human	ensembl	74_37	-1	known	silent	c.1105	p.R369	0.996	pfam_NAP_family	pfam_NAP_family	-	no_errors	NAP1L3	HGNC	ENSG00000186310	tier1	-	-	38	0	0.00	10	3	23.08
NCKAP5	0	genome.wustl.edu	37	2	133483202	133483202	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	2	133483202	133483202	G	T	SNP	NCKAP5	ENST00000317721	human	ensembl	74_37	-1	known	missense	c.5711	p.P1904Q	0.368	NULL	NULL	-	no_errors	NCKAP5	HGNC	ENSG00000176771	tier1	-	-	94	0	0.00	41	4	8.89
NKD2	0	genome.wustl.edu	37	5	1034951	1034951	+	Silent	SNP	C	C	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	5	1034951	1034951	C	T	SNP	NKD2	ENST00000296849	human	ensembl	74_37	+1	known	silent	c.507	p.L169	0.949	NULL	pfscan_EF_hand_dom	-	no_errors	NKD2	HGNC	ENSG00000145506	tier1	-	-	48	0	0.00	30	6	16.67
NLRP1	0	genome.wustl.edu	37	17	5434003	5434003	+	Silent	SNP	G	G	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	17	5434003	5434003	G	T	SNP	NLRP1	ENST00000572272	human	ensembl	74_37	-1	known	silent	c.3318	p.G1106	0.810	NULL	pfam_CARD,pfam_DAPIN,pfam_Leu-rich_rpt,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_CARD,pfscan_DAPIN,prints_Disease_R	-	no_errors	NLRP1	HGNC	ENSG00000091592				43	0	0.00	26	3	10.34
NOL9	0	genome.wustl.edu	37	1	6610498	6610498	+	Missense_Mutation	SNP	T	T	C			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	1	6610498	6610498	T	C	SNP	NOL9	ENST00000377705	human	ensembl	74_37	-1	known	missense	c.574	p.K192E	0.043	NULL	pfam_Pre-mRNA_cleavage_cplxII_Clp1,superfamily_P-loop_NTPase	-	no_errors	NOL9	HGNC	ENSG00000162408	tier1	-	-	102	0	0.00	48	11	18.64
NRCAM	0	genome.wustl.edu	37	7	107872803	107872803	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	7	107872803	107872803	C	A	SNP	NRCAM	ENST00000379028	human	ensembl	74_37	-1	known	missense	c.394	p.A132S	1.000	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	NRCAM	HGNC	ENSG00000091129	tier1	-	-	84	0	0.00	91	9	9.00
OR2M2	0	genome.wustl.edu	37	1	248344165	248344165	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	1	248344165	248344165	G	A	SNP	OR2M2	ENST00000359682	human	ensembl	74_37	+1	known	missense	c.878	p.R293H	0.001	prints_Olfact_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2M2	HGNC	ENSG00000198601	tier1	-	-	166	0	0.00	72	11	13.10
OR6C6	0	genome.wustl.edu	37	12	55688667	55688667	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	12	55688667	55688667	G	A	SNP	OR6C6	ENST00000358433	human	ensembl	74_37	-1	known	missense	c.350	p.S117F	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6C6	HGNC	ENSG00000188324	tier1	-	-	80	0	0.00	38	4	9.52
OR8G1	0	genome.wustl.edu	37	11	124121122	124121122	+	Missense_Mutation	SNP	A	A	G			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	11	124121122	124121122	A	G	SNP	OR8G1	ENST00000341493	human	ensembl	74_37	+1	known	missense	c.700	p.R234G	0.003	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8G1	HGNC	ENSG00000197849	tier1	-	-	140	0	0.00	85	7	7.61
OSBPL6	0	genome.wustl.edu	37	2	179247154	179247154	+	Missense_Mutation	SNP	A	A	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	2	179247154	179247154	A	T	SNP	OSBPL6	ENST00000315022	human	ensembl	74_37	+1	known	missense	c.1553	p.D518V	1.000	NULL	pfam_Oxysterol-bd,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBPL6	HGNC	ENSG00000079156	tier1	-	-	82	0	0.00	31	7	18.42
OSTCP1	0	genome.wustl.edu	37	6	159262436	159262436	+	RNA	DEL	T	T	-			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	6	159262436	159262436	T	0	DEL	OSTCP1	ENST00000522287	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	OSTCP1	HGNC	ENSG00000243775				10	0	0.00	9	2	18.18
OVGP1	0	genome.wustl.edu	37	1	111957574	111957574	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	1	111957574	111957574	C	A	SNP	OVGP1	ENST00000369732	human	ensembl	74_37	-1	known	missense	c.1549	p.V517L	0.010	NULL	pfam_Glyco_hydro18cat,superfamily_Glycoside_hydrolase_SF,smart_Chitinase_II	-	no_errors	OVGP1	HGNC	ENSG00000085465	tier1	-	-	97	0	0.00	41	7	14.29
PC	0	genome.wustl.edu	37	11	66616073	66616073	+	RNA	SNP	A	A	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	11	66616073	66616073	A	T	SNP	PC	ENST00000528224	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	PC	HGNC	ENSG00000173599	tier1	-	-	91	0	0.00	59	9	13.24
PCBP2	0	genome.wustl.edu	37	12	53848620	53848620	+	Silent	SNP	C	C	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	12	53848620	53848620	C	A	SNP	PCBP2	ENST00000603815	human	ensembl	74_37	+1	known	silent	c.36	p.V12	1.000	smart_KH_dom	pfam_KH_dom_type_1,pfam_KH_dom_type_2,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	PCBP2	HGNC	ENSG00000197111	tier1	-	-	115	0	0.00	39	4	9.30
PDXP	0	genome.wustl.edu	37	22	38055258	38055258	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	22	38055258	38055258	G	T	SNP	PDXP	ENST00000215904	human	ensembl	74_37	+1	known	missense	c.469	p.A157S	0.973	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_PGP_euk,tigrfam_HAD-SF_hydro_IIA	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_PGP_euk,tigrfam_HAD-SF_hydro_IIA	-	no_errors	PDXP	HGNC	ENSG00000241360				10	0	0.00	4	3	42.86
PGAP3	0	genome.wustl.edu	37	17	37842243	37842243	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	17	37842243	37842243	C	T	SNP	PGAP3	ENST00000300658	human	ensembl	74_37	-1	known	missense	c.211	p.E71K	1.000	pfam_Per1	pfam_Per1	-	no_errors	PGAP3	HGNC	ENSG00000161395	tier1	-	-	57	0	0.00	32	6	15.79
PINK1	0	genome.wustl.edu	37	1	20964578	20964578	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	1	20964578	20964578	G	T	SNP	PINK1	ENST00000321556	human	ensembl	74_37	+1	known	missense	c.631	p.A211S	0.068	superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	PINK1	HGNC	ENSG00000158828				63	0	0.00	34	4	10.53
PPEF2	0	genome.wustl.edu	37	4	76794369	76794369	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	4	76794369	76794369	G	T	SNP	PPEF2	ENST00000286719	human	ensembl	74_37	-1	known	missense	c.1417	p.Q473K	0.183	pirsf_Ser/Thr-Pase_EF-hand_contain,pfam_PEstase_dom,smart_Ser/Thr-sp_prot-phosphatase	pirsf_Ser/Thr-Pase_EF-hand_contain,pfam_PEstase_dom,pfam_PPP_dom,smart_Ser/Thr-sp_prot-phosphatase,smart_EF_hand_dom,prints_Ser/Thr-sp_prot-phosphatase,pfscan_EF_hand_dom	-	no_errors	PPEF2	HGNC	ENSG00000156194	tier1	-	-	119	0	0.00	54	4	6.90
PPP3R2	0	genome.wustl.edu	37	9	104356907	104356907	+	Silent	SNP	G	G	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	9	104356907	104356907	G	A	SNP	PPP3R2	ENST00000374806	human	ensembl	74_37	-1	known	silent	c.306	p.Y102	1.000	smart_EF_hand_dom,pfscan_EF_hand_dom	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	-	no_errors	PPP3R2	HGNC	ENSG00000188386	tier1	-	-	109	0	0.00	41	4	8.89
PROX1	0	genome.wustl.edu	37	1	214171007	214171007	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	1	214171007	214171007	C	T	SNP	PROX1	ENST00000261454	human	ensembl	74_37	+1	known	missense	c.1129	p.R377C	1.000	pfam_Homeo_prospero_dom	pfam_Homeo_prospero_dom,superfamily_Homeodomain-like	-	no_errors	PROX1	HGNC	ENSG00000117707	tier1	-	-	37	0	0.00	23	6	20.69
PTGER4	0	genome.wustl.edu	37	5	40681944	40681944	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	5	40681944	40681944	C	G	SNP	PTGER4	ENST00000302472	human	ensembl	74_37	+1	known	missense	c.849	p.I283M	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Prostanoid_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Prost_EP4_rcpt,prints_Prostanoid_rcpt,prints_GPCR_Rhodpsn,prints_Prostglndn_DP_rcpt	-	no_errors	PTGER4	HGNC	ENSG00000171522	tier1	-	-	43	0	0.00	15	10	40.00
PTPN14	0	genome.wustl.edu	37	1	214557130	214557131	+	Frame_Shift_Ins	INS	-	-	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	1	214557130	214557131	-	A	INS	PTPN14	ENST00000366956	human	ensembl	74_37	-1	known	frame_shift_ins	c.2068_2067	p.P689fs	0.970:0.517	pirsf_Tyr_Pase_non-rcpt_typ-14/21	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_FERM_central,pfam_FERM_N,pfam_FERM_PH-like_C,pfam_Dual-sp_phosphatase_cat-dom,superfamily_FERM_central,smart_Band_41_domain,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-14/21,pfscan_FERM_domain,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam	-	no_errors	PTPN14	HGNC	ENSG00000152104	tier1			63	0	0.00	16	9	36.00
PXN-AS1	0	genome.wustl.edu	37	12	120639171	120639171	+	RNA	DEL	A	A	-			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	12	120639171	120639171	A	0	DEL	PXN-AS1	ENST00000538804	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PXN-AS1	HGNC	ENSG00000255857				11	0	0.00	5	2	28.57
RABGGTB	0	genome.wustl.edu	37	1	76260328	76260328	+	Missense_Mutation	SNP	T	T	G			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	1	76260328	76260328	T	G	SNP	RABGGTB	ENST00000319942	human	ensembl	74_37	+1	known	missense	c.989	p.V330G	1.000	NULL	pfam_Prenyltrans,superfamily_Terpenoid_cyclase/PrenylTrfase	-	no_errors	RABGGTB	HGNC	ENSG00000137955	tier1	-	-	78	0	0.00	37	4	9.52
RHOBTB3	0	genome.wustl.edu	37	5	95103749	95103749	+	Splice_Site	SNP	G	G	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	5	95103749	95103749	G	T	SNP	RHOBTB3	ENST00000379982	human	ensembl	74_37	+1	known	splice_site	c.1162-1	e8-1	1.000	-	-	-	no_errors	RHOBTB3	HGNC	ENSG00000164292				101	0	0.00	47	3	6.00
RNF216P1	0	genome.wustl.edu	37	7	5016059	5016059	+	RNA	SNP	G	G	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	7	5016059	5016059	G	A	SNP	RNF216P1	ENST00000403969	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RNF216P1	HGNC	ENSG00000196204	tier1	-	-	155	0	0.00	66	25	27.47
RPUSD1	0	genome.wustl.edu	37	16	836115	836115	+	Silent	SNP	G	G	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	16	836115	836115	G	A	SNP	RPUSD1	ENST00000007264	human	ensembl	74_37	-1	known	silent	c.774	p.P258	0.004	NULL	pfam_PsdUridine_synth_RsuA/RluD,superfamily_PsdUridine_synth_cat_dom	-	no_errors	RPUSD1	HGNC	ENSG00000007376	tier1	rs144842334	-	36	0	0.00	15	5	25.00
SAMD9L	0	genome.wustl.edu	37	7	92765282	92765282	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	7	92765282	92765282	C	G	SNP	SAMD9L	ENST00000318238	human	ensembl	74_37	-1	known	missense	c.3	p.M1I	0.189	NULL	superfamily_SAM/pointed,superfamily_P-loop_NTPase,pfscan_SAM	-	no_errors	SAMD9L	HGNC	ENSG00000177409	tier1	-	-	56	0	0.00	61	23	27.38
SCN1B	0	genome.wustl.edu	37	19	35524873	35524873	+	Silent	SNP	C	C	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	19	35524873	35524873	C	T	SNP	SCN1B	ENST00000415950	human	ensembl	74_37	+1	novel	silent	c.678	p.S226	0.001	NULL	pfam_Immunoglobulin,pfam_Ig_V-set	-	no_errors	SCN1B	HGNC	ENSG00000105711	tier1	-	-	106	0	0.00	29	14	32.56
SCYL1	0	genome.wustl.edu	37	11	65304155	65304155	+	Silent	SNP	C	C	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	11	65304155	65304155	C	T	SNP	SCYL1	ENST00000270176	human	ensembl	74_37	+1	known	silent	c.1750	p.L584	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_ARM-type_fold,superfamily_Kinase-like_dom,pfscan_Prot_kinase_dom	-	no_errors	SCYL1	HGNC	ENSG00000142186	tier1	-	-	64	0	0.00	26	4	13.33
SEL1L2	0	genome.wustl.edu	37	20	13850835	13850835	+	Silent	SNP	G	G	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	20	13850835	13850835	G	A	SNP	SEL1L2	ENST00000284951	human	ensembl	74_37	-1	known	silent	c.1119	p.G373	1.000	smart_Sel1-like	pfam_Sel1-like,smart_Sel1-like	-	no_errors	SEL1L2	HGNC	ENSG00000101251	tier1	-	-	75	0	0.00	38	16	29.63
SEL1L2	0	genome.wustl.edu	37	20	13850839	13850840	+	Frame_Shift_Ins	INS	-	-	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	20	13850839	13850840	-	T	INS	SEL1L2	ENST00000284951	human	ensembl	74_37	-1	known	frame_shift_ins	c.1115_1114	p.I372fs	1.000:1.000	smart_Sel1-like	pfam_Sel1-like,smart_Sel1-like	-	no_errors	SEL1L2	HGNC	ENSG00000101251	tier1			71	0	0.00	38	15	28.30
SEMA3A	0	genome.wustl.edu	37	7	83592579	83592579	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	7	83592579	83592579	G	T	SNP	SEMA3A	ENST00000265362	human	ensembl	74_37	-1	known	nonsense	c.1802	p.S601*	1.000	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Semap_dom,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Ig_sub,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA3A	HGNC	ENSG00000075213	tier1	-	-	77	0	0.00	70	4	5.41
SEMA3C	0	genome.wustl.edu	37	7	80432008	80432008	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	7	80432008	80432008	C	T	SNP	SEMA3C	ENST00000544525	human	ensembl	74_37	-1	known	missense	c.943	p.G315S	1.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Ig_I-set,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Ig_sub,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA3C	HGNC	ENSG00000075223				48	0	0.00	46	4	8.00
SLC30A3	0	genome.wustl.edu	37	2	27480186	27480186	+	Frame_Shift_Del	DEL	G	G	-			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	2	27480186	27480186	G	-	DEL	SLC30A3	ENST00000233535	human	ensembl	74_37	-1	known	frame_shift_del	c.613	p.H205fs	0.996	pfam_Cation_efflux,tigrfam_Cation_efflux	pfam_Cation_efflux,tigrfam_Cation_efflux	-	no_errors	SLC30A3	HGNC	ENSG00000115194	tier1			112	0	0.00	38	7	15.56
SLC30A3	0	genome.wustl.edu	37	2	27480193	27480193	+	Silent	SNP	C	C	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	2	27480193	27480193	C	T	SNP	SLC30A3	ENST00000233535	human	ensembl	74_37	-1	known	silent	c.606	p.G202	0.997	pfam_Cation_efflux,tigrfam_Cation_efflux	pfam_Cation_efflux,tigrfam_Cation_efflux	-	no_errors	SLC30A3	HGNC	ENSG00000115194	tier1	-	-	112	0	0.00	39	7	15.22
SLC46A3	0	genome.wustl.edu	37	13	29278264	29278265	+	RNA	INS	-	-	AA			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	13	29278264	29278265	-	AA	INS	SLC46A3	ENST00000475385	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	SLC46A3	HGNC	ENSG00000139508	tier1			30	0	0.00	13	2	13.33
SLC6A3	0	genome.wustl.edu	37	5	1443252	1443252	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	5	1443252	1443252	G	A	SNP	SLC6A3	ENST00000270349	human	ensembl	74_37	-1	known	missense	c.61	p.P21S	0.786	prints_Na/ntran_symport_dopamine	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_dopamine	-	no_errors	SLC6A3	HGNC	ENSG00000142319	tier1	-	-	68	0	0.00	42	8	16.00
SNX14	0	genome.wustl.edu	37	6	86277260	86277260	+	Silent	SNP	C	C	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	6	86277260	86277260	C	T	SNP	SNX14	ENST00000314673	human	ensembl	74_37	-1	known	silent	c.453	p.P151	0.864	pfam_Phox_assoc,smart_PX_assoc_Snx13,pfscan_Phox_assoc	pfam_Phox_assoc,pfam_Sorting_nexin_C,pfam_Phox,pfam_RGS_dom,superfamily_Phox,superfamily_Regulat_G_prot_signal_superfam,smart_PX_assoc_Snx13,smart_Regulat_G_prot_signal_superfam,smart_Phox,pfscan_Phox,pfscan_Phox_assoc,pfscan_Regulat_G_prot_signal_superfam	-	no_errors	SNX14	HGNC	ENSG00000135317	tier1	-	-	18	0	0.00	8	3	27.27
SOX5	0	genome.wustl.edu	37	12	23999004	23999004	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	12	23999004	23999004	G	A	SNP	SOX5	ENST00000451604	human	ensembl	74_37	-1	known	missense	c.394	p.P132S	1.000	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX5	HGNC	ENSG00000134532	tier1	-	-	56	0	0.00	29	8	21.62
SPG11	0	genome.wustl.edu	37	15	44914420	44914420	+	Silent	SNP	G	G	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	15	44914420	44914420	G	T	SNP	SPG11	ENST00000261866	human	ensembl	74_37	-1	known	silent	c.2442	p.P814	1.000	NULL	NULL	-	no_errors	SPG11	HGNC	ENSG00000104133	tier1	-	-	90	0	0.00	30	3	9.09
SREBF1	0	genome.wustl.edu	37	17	17718043	17718043	+	Missense_Mutation	SNP	T	T	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	17	17718043	17718043	T	A	SNP	SREBF1	ENST00000355815	human	ensembl	74_37	-1	known	missense	c.2711	p.K904M	1.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	SREBF1	HGNC	ENSG00000072310				50	0	0.00	27	4	12.90
TAOK2	0	genome.wustl.edu	37	16	29996571	29996571	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	16	29996571	29996571	C	T	SNP	TAOK2	ENST00000308893	human	ensembl	74_37	+1	known	missense	c.1460	p.A487V	0.996	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TAOK2	HGNC	ENSG00000149930				89	0	0.00	34	3	8.11
TFPI2	0	genome.wustl.edu	37	7	93519957	93519957	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	7	93519957	93519957	G	T	SNP	TFPI2	ENST00000222543	human	ensembl	74_37	-1	known	missense	c.34	p.L12M	0.113	pirsf_Prot_inhib_I2_TFPI	pirsf_Prot_inhib_I2_TFPI,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,smart_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m,pfscan_Prot_inh_Kunz-m	-	no_errors	TFPI2	HGNC	ENSG00000105825	tier1	-	-	18	0	0.00	13	11	45.83
TP53	0	genome.wustl.edu	37	17	7578493	7578493	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	17	7578493	7578493	C	T	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	nonsense	c.437	p.W146*	0.248	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	57	0	0.00	18	11	37.93
TRIM27	0	genome.wustl.edu	37	6	28875015	28875015	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	6	28875015	28875015	G	A	SNP	TRIM27	ENST00000377199	human	ensembl	74_37	-1	known	missense	c.944	p.S315L	1.000	superfamily_ConA-like_lec_gl_sf,smart_PRY,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin,prints_Znf_B-box_chordata	-	no_errors	TRIM27	HGNC	ENSG00000204713	tier1	-	-	92	0	0.00	36	7	16.28
TROVE2	0	genome.wustl.edu	37	1	193054347	193054347	+	RNA	DEL	A	A	-			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	1	193054347	193054347	A	-	DEL	TROVE2	ENST00000460715	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TROVE2	HGNC	ENSG00000116747	tier1			39	0	0.00	26	2	7.14
UHMK1	0	genome.wustl.edu	37	1	162492706	162492706	+	RNA	SNP	G	G	C			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	1	162492706	162492706	G	C	SNP	UHMK1	ENST00000282169	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	UHMK1	HGNC	ENSG00000152332	tier1	-	-	173	0	0.00	77	8	9.41
VAT1	0	genome.wustl.edu	37	17	41168411	41168411	+	Silent	SNP	C	C	G			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	17	41168411	41168411	C	G	SNP	VAT1	ENST00000355653	human	ensembl	74_37	-1	known	silent	c.1011	p.L337	0.997	smart_PKS_ER	pfam_ADH_C,pfam_ADH_GroES-like,superfamily_GroES-like,smart_PKS_ER	-	no_errors	VAT1	HGNC	ENSG00000108828	tier1	-	-	44	0	0.00	17	4	19.05
XPO4	0	genome.wustl.edu	37	13	21374323	21374323	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	13	21374323	21374323	G	T	SNP	XPO4	ENST00000255305	human	ensembl	74_37	-1	known	missense	c.2119	p.L707I	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	XPO4	HGNC	ENSG00000132953	tier1	-	-	86	0	0.00	25	3	10.71
YTHDC1	0	genome.wustl.edu	37	4	69189889	69189889	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	4	69189889	69189889	G	T	SNP	YTHDC1	ENST00000344157	human	ensembl	74_37	-1	known	missense	c.1402	p.H468N	1.000	pfam_YTH_domain,pfscan_YTH_domain	pfam_YTH_domain,pfscan_YTH_domain	-	no_errors	YTHDC1	HGNC	ENSG00000083896	tier1	-	-	124	0	0.00	66	4	5.71
ZFPM2	0	genome.wustl.edu	37	8	106431482	106431482	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	8	106431482	106431482	G	C	SNP	ZFPM2	ENST00000407775	human	ensembl	74_37	+1	known	missense	c.151	p.G51R	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFPM2	HGNC	ENSG00000169946	tier1	-	-	50	0	0.00	54	4	6.90
ZHX3	0	genome.wustl.edu	37	20	39831306	39831306	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	20	39831306	39831306	G	T	SNP	ZHX3	ENST00000309060	human	ensembl	74_37	-1	known	missense	c.2251	p.P751T	0.001	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	ZHX3	HGNC	ENSG00000174306	tier1	-	-	58	0	0.00	30	4	11.76
ZIM2	0	genome.wustl.edu	37	19	57290775	57290775	+	Missense_Mutation	SNP	T	T	G			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	19	57290775	57290775	T	G	SNP	ZIM2	ENST00000221722	human	ensembl	74_37	-1	known	missense	c.712	p.T238P	0.004	pfscan_Krueppel-associated_box	pfam_Krueppel-associated_box,pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZIM2	HGNC	ENSG00000269699	tier1	-	-	89	0	0.00	59	9	13.24
ZNF488	0	genome.wustl.edu	37	10	48370969	48370969	+	Missense_Mutation	SNP	A	A	G			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	10	48370969	48370969	A	G	SNP	ZNF488	ENST00000395702	human	ensembl	74_37	+1	known	missense	c.437	p.K146R	0.003	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF488	HGNC	ENSG00000165388	tier1	rs140082282	-	72	0	0.00	18	9	33.33
ZNF613	0	genome.wustl.edu	37	19	52447931	52447931	+	Silent	SNP	T	T	C			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	19	52447931	52447931	T	C	SNP	ZNF613	ENST00000293471	human	ensembl	74_37	+1	known	silent	c.795	p.C265	0.964	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF613	HGNC	ENSG00000176024	tier1	-	-	73	0	0.00	33	4	10.81
ZNF671	0	genome.wustl.edu	37	19	58232292	58232292	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A3YC-01A-11D-A247-09	TCGA-IG-A3YC-10A-01D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c529fe8f-c004-4642-a506-93e894bc5712	648b50f7-18ce-4188-83d1-e095f4b0b98b	19	58232292	58232292	G	T	SNP	ZNF671	ENST00000317398	human	ensembl	74_37	-1	known	missense	c.1162	p.Q388K	0.960	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF671	HGNC	ENSG00000083814	tier1	-	-	72	0	0.00	38	7	15.56
