Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ABCA12	0	genome.wustl.edu	37	2	215866355	215866355	+	Silent	SNP	A	A	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	2	215866355	215866355	A	G	SNP	ABCA12	ENST00000272895	human	ensembl	74_37	-1	known	silent	c.2790	p.I930	1.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA12	HGNC	ENSG00000144452	tier1	-	-	82	0	0.00	102	38	27.14
ABCA12	0	genome.wustl.edu	37	2	215890500	215890500	+	Frame_Shift_Del	DEL	T	T	-			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	2	215890500	215890500	T	-	DEL	ABCA12	ENST00000272895	human	ensembl	74_37	-1	known	frame_shift_del	c.1184	p.N395fs	1.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA12	HGNC	ENSG00000144452	tier1			50	0	0.00	51	11	17.74
ABCA6	0	genome.wustl.edu	37	17	67097074	67097074	+	Missense_Mutation	SNP	T	T	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	17	67097074	67097074	T	C	SNP	ABCA6	ENST00000284425	human	ensembl	74_37	-1	known	missense	c.2876	p.D959G	0.999	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA6	HGNC	ENSG00000154262	tier1	-	-	19	0	0.00	22	8	25.81
ABCC1	0	genome.wustl.edu	37	16	16162026	16162026	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	16	16162026	16162026	C	T	SNP	ABCC1	ENST00000399408	human	ensembl	74_37	+1	known	missense	c.1691	p.T564I	0.995	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom,tigrfam_Multidrug-R_assoc	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,tigrfam_Multidrug-R_assoc	-	no_errors	ABCC1	HGNC	ENSG00000103222	tier1	-	-	84	0	0.00	112	9	7.44
ABCC2	0	genome.wustl.edu	37	10	101553428	101553428	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	10	101553428	101553428	C	T	SNP	ABCC2	ENST00000370449	human	ensembl	74_37	+1	known	missense	c.454	p.R152W	1.000	tigrfam_Multidrug-R_assoc	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,tigrfam_Multidrug-R_assoc	-	no_errors	ABCC2	HGNC	ENSG00000023839	tier1	rs146452937	-	50	0	0.00	58	5	7.94
ACSBG1	0	genome.wustl.edu	37	15	78474909	78474909	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	15	78474909	78474909	C	A	SNP	ACSBG1	ENST00000258873	human	ensembl	74_37	-1	known	missense	c.793	p.D265Y	1.000	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSBG1	HGNC	ENSG00000103740	tier1	-	-	44	0	0.00	22	13	37.14
ACTBP12	0	genome.wustl.edu	37	1	92694815	92694815	+	RNA	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	1	92694815	92694815	C	T	SNP	ACTBP12	ENST00000594933	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ACTBP12	HGNC	ENSG00000233125	tier1	-	-	110	0	0.00	48	67	58.26
ADAM20	0	genome.wustl.edu	37	14	70990815	70990816	+	Frame_Shift_Ins	INS	-	-	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	14	70990815	70990816	-	T	INS	ADAM20	ENST00000256389	human	ensembl	74_37	-1	known	frame_shift_ins	c.810_809	p.Y270fs	0.000:0.000	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM20	HGNC	ENSG00000134007	tier1			13	0	0.00	15	4	21.05
ADAMTS12	0	genome.wustl.edu	37	5	33614421	33614421	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	5	33614421	33614421	G	T	SNP	ADAMTS12	ENST00000504830	human	ensembl	74_37	-1	known	missense	c.2449	p.L817I	0.689	NULL	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS12	HGNC	ENSG00000151388	tier1	-	-	50	0	0.00	26	16	38.10
ADAMTS16	0	genome.wustl.edu	37	5	5239960	5239960	+	Silent	SNP	T	T	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	5	5239960	5239960	T	C	SNP	ADAMTS16	ENST00000274181	human	ensembl	74_37	+1	known	silent	c.2445	p.T815	0.032	pfam_ADAM_spacer1	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS16	HGNC	ENSG00000145536	tier1	-	-	29	0	0.00	12	10	45.45
ADAMTS19	0	genome.wustl.edu	37	5	129039996	129039996	+	Missense_Mutation	SNP	A	A	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	5	129039996	129039996	A	C	SNP	ADAMTS19	ENST00000274487	human	ensembl	74_37	+1	known	missense	c.3206	p.K1069T	0.997	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_PLAC,pfam_Pept_M10_metallopeptidase,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS19	HGNC	ENSG00000145808	tier1	-	-	48	0	0.00	33	16	32.65
ADAMTS2	0	genome.wustl.edu	37	5	178552066	178552066	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	5	178552066	178552066	C	T	SNP	ADAMTS2	ENST00000251582	human	ensembl	74_37	-1	known	missense	c.2866	p.A956T	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Pept_M12B_ADAM-TS2,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS2	HGNC	ENSG00000087116	tier1	-	-	64	0	0.00	25	10	28.57
ADCY4	0	genome.wustl.edu	37	14	24788372	24788372	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	14	24788372	24788372	G	A	SNP	ADCY4	ENST00000310677	human	ensembl	74_37	-1	known	missense	c.2888	p.A963V	1.000	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY4	HGNC	ENSG00000129467				25	0	0.00	31	2	6.06
ADRA1D	0	genome.wustl.edu	37	20	4202559	4202559	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	20	4202559	4202559	C	T	SNP	ADRA1D	ENST00000379453	human	ensembl	74_37	-1	known	missense	c.1330	p.G444S	0.396	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,prints_ADRA1D_rcpt,prints_GPCR_Rhodpsn,prints_ADR_fam,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	ADRA1D	HGNC	ENSG00000171873	tier1	-	-	17	0	0.00	12	10	45.45
AGTR2	0	genome.wustl.edu	37	X	115303887	115303887	+	Missense_Mutation	SNP	A	A	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	X	115303887	115303887	A	C	SNP	AGTR2	ENST00000371906	human	ensembl	74_37	+1	known	missense	c.354	p.K118N	0.988	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_ATII_AT2_rcpt,prints_GPCR_Rhodpsn,prints_ATII_rcpt,prints_Brdyknn_rcpt,prints_Chemokine_rcpt,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	AGTR2	HGNC	ENSG00000180772	tier1	-	-	22	0	0.00	30	13	30.23
AHDC1	0	genome.wustl.edu	37	1	27878147	27878147	+	Silent	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	1	27878147	27878147	G	A	SNP	AHDC1	ENST00000247087	human	ensembl	74_37	-1	known	silent	c.480	p.P160	0.224	NULL	NULL	-	no_errors	AHDC1	HGNC	ENSG00000126705				23	0	0.00	19	4	16.67
AKNA	0	genome.wustl.edu	37	9	117108226	117108226	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	9	117108226	117108226	C	T	SNP	AKNA	ENST00000307564	human	ensembl	74_37	-1	known	missense	c.3578	p.S1193N	0.000	NULL	pfam_TF_AT-hook	-	no_errors	AKNA	HGNC	ENSG00000106948	tier1	-	-	36	0	0.00	34	4	10.53
ALDH18A1	0	genome.wustl.edu	37	10	97380872	97380872	+	Silent	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	10	97380872	97380872	G	T	SNP	ALDH18A1	ENST00000371224	human	ensembl	74_37	-1	known	silent	c.1383	p.A461	1.000	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH,pirsf_P5_carboxy_syn,tigrfam_P5_carboxy_syn,tigrfam_G-glutamylP_reductase	pfam_Asp/Glu/Uridylate_kinase,pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH,superfamily_Asp/Glu/Uridylate_kinase,pirsf_P5_carboxy_syn,prints_Glu/AcGlu_kinase,tigrfam_P5_carboxy_syn,tigrfam_G-glutamylP_reductase	-	no_errors	ALDH18A1	HGNC	ENSG00000059573				56	0	0.00	50	4	7.41
ALDH3A1	0	genome.wustl.edu	37	17	19644521	19644521	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	17	19644521	19644521	C	T	SNP	ALDH3A1	ENST00000225740	human	ensembl	74_37	-1	known	missense	c.692	p.R231H	1.000	pfam_Aldehyde_DH_dom,pfam_Acyl-CoA_reduct_LuxC,superfamily_Ald_DH/histidinol_DH,pirsf_Aldehyde_DH_NAD(P)	pfam_Aldehyde_DH_dom,pfam_Acyl-CoA_reduct_LuxC,superfamily_Ald_DH/histidinol_DH,pirsf_Aldehyde_DH_NAD(P)	-	no_errors	ALDH3A1	HGNC	ENSG00000108602				33	0	0.00	33	3	8.33
ANKK1	0	genome.wustl.edu	37	11	113264253	113264253	+	Missense_Mutation	SNP	A	A	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	11	113264253	113264253	A	C	SNP	ANKK1	ENST00000303941	human	ensembl	74_37	+1	known	missense	c.236	p.K79T	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ankyrin_rpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Ankyrin_rpt,prints_Ankyrin_rpt,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom	-	no_errors	ANKK1	HGNC	ENSG00000170209	tier1	-	-	78	0	0.00	55	9	14.06
ANO3	0	genome.wustl.edu	37	11	26563506	26563506	+	Missense_Mutation	SNP	A	A	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	11	26563506	26563506	A	C	SNP	ANO3	ENST00000256737	human	ensembl	74_37	+1	known	missense	c.1045	p.S349R	1.000	NULL	pfam_Anoctamin	-	no_errors	ANO3	HGNC	ENSG00000134343	tier1	-	-	25	0	0.00	29	4	12.12
APC	0	genome.wustl.edu	37	5	112175663	112175663	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	5	112175663	112175663	C	T	SNP	APC	ENST00000257430	human	ensembl	74_37	+1	known	missense	c.4372	p.P1458S	0.182	NULL	pfam_APC_basic_dom,pfam_EB1-bd,pfam_APC_Cys-rich_rpt,pfam_Armadillo,pfam_APC_dom,pfam_SAMP,pfam_APC_15aa_rpt,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	APC	HGNC	ENSG00000134982				16	0	0.00	18	2	10.00
APOB	0	genome.wustl.edu	37	2	21233221	21233221	+	Missense_Mutation	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	2	21233221	21233221	T	G	SNP	APOB	ENST00000233242	human	ensembl	74_37	-1	known	missense	c.6519	p.Q2173H	0.268	NULL	pfam_Lipid_transpt_N,pfam_Vitellinogen_open_b-sht,pfam_ApoB100_C,pfam_Lipid_transpt_open_b-sht,superfamily_Lipid_transp_b-sht_shell,superfamily_Vitellinogen_superhlx,superfamily_ARM-type_fold,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	APOB	HGNC	ENSG00000084674	tier1	-	-	26	0	0.00	39	16	29.09
ARAP2	0	genome.wustl.edu	37	4	36130200	36130202	+	In_Frame_Del	DEL	CAT	CAT	-			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	CAT	CAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	4	36130200	36130202	CAT	-	DEL	ARAP2	ENST00000303965	human	ensembl	74_37	-1	known	in_frame_del	c.3595_3593	p.D1198in_frame_del	1.000:1.000:1.000	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,pfam_ArfGAP,pfam_SAM_type1,pfam_SAM_2,pfam_Ras-assoc,superfamily_Rho_GTPase_activation_prot,superfamily_SAM/pointed,smart_SAM,smart_Pleckstrin_homology,smart_ArfGAP,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SAM,pfscan_ArfGAP,pfscan_RhoGAP_dom,prints_ArfGAP	-	no_errors	ARAP2	HGNC	ENSG00000047365	tier1			35	0	0.00	35	8	18.60
ARL13B	0	genome.wustl.edu	37	3	93699148	93699148	+	RNA	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	3	93699148	93699148	T	G	SNP	ARL13B	ENST00000486562	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ARL13B	HGNC	ENSG00000169379	tier1	-	-	42	0	0.00	20	28	58.33
ASB10	0	genome.wustl.edu	37	7	150884266	150884267	+	Frame_Shift_Ins	INS	-	-	AG			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	7	150884266	150884267	-	AG	INS	ASB10	ENST00000422024	human	ensembl	74_37	-1	known	frame_shift_ins	c.87_86	p.P30fs	0.000:0.003	NULL	pfam_Ankyrin_rpt,pfam_SOCS_C,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_SOCS_C,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SOCS_C,prints_Ankyrin_rpt	-	no_errors	ASB10	HGNC	ENSG00000146926	tier1			9	0	0.00	17	12	41.38
ASB7	0	genome.wustl.edu	37	15	101169730	101169730	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	15	101169730	101169730	G	A	SNP	ASB7	ENST00000332783	human	ensembl	74_37	+1	known	missense	c.300	p.M100I	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_SOCS_C,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_SOCS_C,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SOCS_C,prints_Ankyrin_rpt	-	no_errors	ASB7	HGNC	ENSG00000183475				25	0	0.00	18	6	25.00
ATP1A2	0	genome.wustl.edu	37	1	160099104	160099104	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	1	160099104	160099104	G	C	SNP	ATP1A2	ENST00000361216	human	ensembl	74_37	+1	known	missense	c.1375	p.E459Q	1.000	pfam_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Na/K_IIC	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP1A2	HGNC	ENSG00000018625				22	0	0.00	56	3	5.00
BCL9L	0	genome.wustl.edu	37	11	118772171	118772171	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	11	118772171	118772171	C	A	SNP	BCL9L	ENST00000334801	human	ensembl	74_37	-1	known	missense	c.2281	p.V761L	1.000	NULL	pfam_BCL9_beta-catenin-bd_dom	-	no_errors	BCL9L	HGNC	ENSG00000186174	tier1	-	-	70	0	0.00	70	6	7.89
BICC1	0	genome.wustl.edu	37	10	60573843	60573843	+	Missense_Mutation	SNP	A	A	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	10	60573843	60573843	A	G	SNP	BICC1	ENST00000263103	human	ensembl	74_37	+1	known	missense	c.1508	p.K503R	0.004	NULL	NULL	-	no_errors	BICC1	HGNC	ENSG00000122870	tier1	-	-	59	0	0.00	45	24	34.78
BNC1	0	genome.wustl.edu	37	15	83935797	83935798	+	Frame_Shift_Ins	INS	-	-	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	15	83935797	83935798	-	G	INS	BNC1	ENST00000345382	human	ensembl	74_37	-1	known	frame_shift_ins	c.226_225	p.M75fs	0.001:0.001	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	BNC1	HGNC	ENSG00000169594	tier1			40	0	0.00	24	12	33.33
BRINP3	0	genome.wustl.edu	37	1	190250831	190250831	+	Missense_Mutation	SNP	A	A	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	1	190250831	190250831	A	G	SNP	BRINP3	ENST00000367462	human	ensembl	74_37	-1	known	missense	c.286	p.F96L	1.000	pfam_MACPF,smart_MACPF	pfam_MACPF,smart_MACPF	-	no_errors	BRINP3	HGNC	ENSG00000162670	tier1	-	-	21	0	0.00	28	13	31.71
C1QTNF9-AS1	0	genome.wustl.edu	37	13	24890109	24890109	+	RNA	SNP	C	C	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	13	24890109	24890109	C	A	SNP	C1QTNF9-AS1	ENST00000449656	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.322	-	-	-	no_errors	C1QTNF9-AS1	HGNC	ENSG00000240868	tier1	-	-	49	0	0.00	32	11	25.58
C5AR1	0	genome.wustl.edu	37	19	47823632	47823632	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	19	47823632	47823632	C	T	SNP	C5AR1	ENST00000355085	human	ensembl	74_37	+1	known	nonsense	c.598	p.R200*	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Anaphtx_C5AR1/C5AR2,prints_GPCR_Rhodpsn,prints_Anphylx_rcpt,prints_Brdyknn_rcpt,prints_Formyl_pep_rcpt	-	no_errors	C5AR1	HGNC	ENSG00000197405	tier1	-	-	83	0	0.00	71	23	24.21
C9orf78	0	genome.wustl.edu	37	9	132596000	132596001	+	RNA	INS	-	-	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	9	132596000	132596001	-	A	INS	C9orf78	ENST00000461762	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.062:0.115	-	-	-	no_errors	C9orf78	HGNC	ENSG00000136819	tier1			21	0	0.00	19	5	20.83
CACNA1D	0	genome.wustl.edu	37	3	53809943	53809943	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	3	53809943	53809943	C	G	SNP	CACNA1D	ENST00000288139	human	ensembl	74_37	+1	known	missense	c.4293	p.I1431M	1.000	pfam_Ion_trans_dom,pfam_PKD1_2_channel	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_L_a1su,prints_LVDCC_a1dsu	-	no_errors	CACNA1D	HGNC	ENSG00000157388	tier1	-	-	56	0	0.00	29	24	45.28
CC2D2B	0	genome.wustl.edu	37	10	97728514	97728514	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	10	97728514	97728514	G	T	SNP	CC2D2B	ENST00000472454	human	ensembl	74_37	+1	novel	missense	c.492	p.K164N	1.000	NULL	NULL	-	no_errors	RP11-248J23.6	Clone_based_vega_gene	ENSG00000269948	tier1	-	-	30	0	0.00	28	4	12.50
CCDC54	0	genome.wustl.edu	37	3	107096766	107096766	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	3	107096766	107096766	G	A	SNP	CCDC54	ENST00000261058	human	ensembl	74_37	+1	known	missense	c.332	p.R111K	0.377	NULL	NULL	-	no_errors	CCDC54	HGNC	ENSG00000138483	tier1	-	-	22	0	0.00	36	8	18.18
CDC123	0	genome.wustl.edu	37	10	12257743	12257743	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	10	12257743	12257743	C	G	SNP	CDC123	ENST00000281141	human	ensembl	74_37	+1	known	missense	c.242	p.P81R	1.000	pfam_D123,pirsf_Cell_div_Cdc123	pfam_D123,pirsf_Cell_div_Cdc123	-	no_errors	CDC123	HGNC	ENSG00000151465				32	0	0.00	22	8	26.67
CDH19	0	genome.wustl.edu	37	18	64172528	64172528	+	Missense_Mutation	SNP	A	A	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	18	64172528	64172528	A	C	SNP	CDH19	ENST00000262150	human	ensembl	74_37	-1	known	missense	c.1840	p.L614V	0.104	NULL	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH19	HGNC	ENSG00000071991	tier1	-	-	18	0	0.00	5	16	76.19
CDH26	0	genome.wustl.edu	37	20	58587737	58587737	+	Silent	SNP	A	A	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	20	58587737	58587737	A	G	SNP	CDH26	ENST00000348616	human	ensembl	74_37	+1	known	silent	c.2451	p.K817	0.000	NULL	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH26	HGNC	ENSG00000124215	tier1	-	-	44	0	0.00	64	6	8.57
CDSN	0	genome.wustl.edu	37	6	31084612	31084612	+	Silent	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	6	31084612	31084612	G	A	SNP	CDSN	ENST00000376288	human	ensembl	74_37	-1	known	silent	c.780	p.H260	0.969	NULL	NULL	-	no_errors	CDSN	HGNC	ENSG00000204539	tier1	-	-	33	0	0.00	27	30	52.63
CEP164P1	0	genome.wustl.edu	37	10	45566288	45566288	+	RNA	SNP	T	T	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	10	45566288	45566288	T	C	SNP	CEP164P1	ENST00000598522	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.969	-	-	-	no_errors	CEP164P1	HGNC	ENSG00000226937	tier1	-	-	20	0	0.00	17	5	22.73
CEP350	0	genome.wustl.edu	37	1	179966116	179966116	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	1	179966116	179966116	G	A	SNP	CEP350	ENST00000367607	human	ensembl	74_37	+1	known	missense	c.824	p.R275Q	1.000	NULL	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,pfscan_CAP-Gly_domain	-	no_errors	CEP350	HGNC	ENSG00000135837	tier1	rs146475303	-	21	0	0.00	19	14	42.42
CHMP4A	0	genome.wustl.edu	37	14	24682715	24682715	+	Silent	SNP	A	A	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	14	24682715	24682715	A	G	SNP	CHMP4A	ENST00000347519	human	ensembl	74_37	-1	known	silent	c.60	p.H20	0.000	NULL	pfam_Snf7	-	no_errors	CHMP4A	HGNC	ENSG00000254505	tier1	-	-	41	0	0.00	54	13	19.40
CHODL	0	genome.wustl.edu	37	21	19635123	19635123	+	Missense_Mutation	SNP	T	T	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	21	19635123	19635123	T	C	SNP	CHODL	ENST00000299295	human	ensembl	74_37	+1	known	missense	c.650	p.L217P	1.000	NULL	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	CHODL	HGNC	ENSG00000154645	tier1	-	-	41	0	0.00	11	36	76.60
CHRD	0	genome.wustl.edu	37	3	184106421	184106421	+	Silent	SNP	T	T	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	3	184106421	184106421	T	C	SNP	CHRD	ENST00000204604	human	ensembl	74_37	+1	known	silent	c.2601	p.D867	1.000	pirsf_Chordin	pfam_CHRD,pfam_VWF_C,smart_VWF_C,smart_CHRD,pirsf_Chordin,pfscan_CHRD,pfscan_VWF_C	-	no_errors	CHRD	HGNC	ENSG00000090539	tier1	-	-	57	0	0.00	72	26	26.53
CISD1	0	genome.wustl.edu	37	10	60029032	60029032	+	RNA	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	10	60029032	60029032	C	T	SNP	CISD1	ENST00000464703	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.995	-	-	-	no_errors	CISD1	HGNC	ENSG00000122873	tier1	-	-	99	0	0.00	54	24	30.77
CLSTN2	0	genome.wustl.edu	37	3	140282851	140282851	+	Missense_Mutation	SNP	T	T	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	3	140282851	140282851	T	C	SNP	CLSTN2	ENST00000458420	human	ensembl	74_37	+1	known	missense	c.2531	p.L844P	0.998	NULL	pfam_Cadherin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CLSTN2	HGNC	ENSG00000158258	tier1	-	-	82	0	0.00	90	35	28.00
CNBD1	0	genome.wustl.edu	37	8	88365898	88365898	+	Missense_Mutation	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	8	88365898	88365898	T	G	SNP	CNBD1	ENST00000518476	human	ensembl	74_37	+1	known	missense	c.1187	p.L396R	0.229	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,pfscan_cNMP-bd_dom	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,pfscan_cNMP-bd_dom	-	no_errors	CNBD1	HGNC	ENSG00000176571	tier1	-	-	53	0	0.00	114	19	14.29
CNTN1	0	genome.wustl.edu	37	12	41316209	41316209	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	12	41316209	41316209	G	A	SNP	CNTN1	ENST00000347616	human	ensembl	74_37	+1	known	missense	c.379	p.E127K	0.997	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN1	HGNC	ENSG00000018236				19	0	0.00	19	3	13.64
CNTN3	0	genome.wustl.edu	37	3	74347115	74347115	+	Silent	SNP	T	T	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	3	74347115	74347115	T	C	SNP	CNTN3	ENST00000263665	human	ensembl	74_37	-1	known	silent	c.2394	p.A798	1.000	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN3	HGNC	ENSG00000113805	tier1	-	-	26	0	0.00	25	17	40.48
COL14A1	0	genome.wustl.edu	37	8	121381666	121381666	+	Silent	SNP	T	T	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	8	121381666	121381666	T	A	SNP	COL14A1	ENST00000297848	human	ensembl	74_37	+1	known	silent	c.5253	p.G1751	1.000	NULL	pfam_VWF_A,pfam_Fibronectin_type3,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL14A1	HGNC	ENSG00000187955	tier1	-	-	41	0	0.00	70	5	6.67
COL9A2	0	genome.wustl.edu	37	1	40776803	40776803	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	1	40776803	40776803	G	A	SNP	COL9A2	ENST00000372748	human	ensembl	74_37	-1	known	missense	c.592	p.R198C	0.003	pfam_Collagen	pfam_Collagen	-	no_errors	COL9A2	HGNC	ENSG00000049089	tier1	-	-	43	0	0.00	26	9	25.71
CSMD1	0	genome.wustl.edu	37	8	2966186	2966186	+	Missense_Mutation	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	8	2966186	2966186	T	G	SNP	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	missense	c.6696	p.Q2232H	0.914	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117	tier1	-	-	44	0	0.00	31	8	20.51
CSMD2	0	genome.wustl.edu	37	1	34037135	34037135	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	1	34037135	34037135	G	A	SNP	CSMD2	ENST00000373381	human	ensembl	74_37	-1	known	nonsense	c.7954	p.R2652*	1.000	superfamily_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD2	HGNC	ENSG00000121904	tier1	-	-	56	0	0.00	27	25	48.08
CSMD3	0	genome.wustl.edu	37	8	113277663	113277663	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	8	113277663	113277663	C	G	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	missense	c.9665	p.S3222T	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796	tier1	-	-	53	0	0.00	94	8	7.84
CSMD3	0	genome.wustl.edu	37	8	113326137	113326137	+	Missense_Mutation	SNP	A	A	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	8	113326137	113326137	A	T	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	missense	c.7694	p.I2565K	1.000	superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796	tier1	-	-	43	0	0.00	146	17	10.43
CWF19L2	0	genome.wustl.edu	37	11	107326458	107326458	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	11	107326458	107326458	C	A	SNP	CWF19L2	ENST00000282251	human	ensembl	74_37	-1	known	missense	c.150	p.K50N	1.000	NULL	pfam_Cwf19-like_C_dom-1,pfam_Cwf19-like_C_dom-2,superfamily_HIT-like	-	no_errors	CWF19L2	HGNC	ENSG00000152404	tier1	-	-	34	0	0.00	34	12	26.09
CYP7B1	0	genome.wustl.edu	37	8	65527677	65527677	+	Missense_Mutation	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	8	65527677	65527677	T	G	SNP	CYP7B1	ENST00000310193	human	ensembl	74_37	-1	known	missense	c.963	p.E321D	1.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I,prints_Cyt_P450	-	no_errors	CYP7B1	HGNC	ENSG00000172817	tier1	-	-	56	0	0.00	99	18	15.38
DCHS2	0	genome.wustl.edu	37	4	155411241	155411241	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	4	155411241	155411241	C	T	SNP	DCHS2	ENST00000339452	human	ensembl	74_37	-1	known	missense	c.1267	p.V423I	0.001	superfamily_Cadherin-like	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	DCHS2	HGNC	ENSG00000197410	tier1	-	-	31	0	0.00	19	4	17.39
DCN	0	genome.wustl.edu	37	12	91552198	91552198	+	Missense_Mutation	SNP	T	T	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	12	91552198	91552198	T	C	SNP	DCN	ENST00000052754	human	ensembl	74_37	-1	known	missense	c.413	p.K138R	1.000	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,pirsf_SLRP_I_decor/aspor/byglycan	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,pirsf_SLRP_I_decor/aspor/byglycan	-	no_errors	DCN	HGNC	ENSG00000011465	tier1	-	-	44	0	0.00	49	14	22.22
DMD	0	genome.wustl.edu	37	X	32381009	32381009	+	Missense_Mutation	SNP	A	A	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	X	32381009	32381009	A	C	SNP	DMD	ENST00000357033	human	ensembl	74_37	-1	known	missense	c.5221	p.L1741V	1.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin,pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947	tier1	-	-	23	0	0.00	26	12	31.58
DNAH2	0	genome.wustl.edu	37	17	7637950	7637950	+	Missense_Mutation	SNP	A	A	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	17	7637950	7637950	A	T	SNP	DNAH2	ENST00000389173	human	ensembl	74_37	+1	known	missense	c.902	p.K301M	0.944	pfam_Dynein_heavy_dom-1	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH2	HGNC	ENSG00000183914	tier1	-	-	66	0	0.00	9	26	74.29
DNAH7	0	genome.wustl.edu	37	2	196834703	196834703	+	Missense_Mutation	SNP	A	A	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	2	196834703	196834703	A	C	SNP	DNAH7	ENST00000312428	human	ensembl	74_37	-1	known	missense	c.2174	p.L725R	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,superfamily_P-loop_NTPase,superfamily_Signal_recog_particle_SRP9/14,smart_AAA+_ATPase,pfscan_EF_hand_dom	-	no_errors	DNAH7	HGNC	ENSG00000118997	tier1	-	-	44	0	0.00	50	20	28.57
DNAJC3	0	genome.wustl.edu	37	13	96409994	96409994	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	13	96409994	96409994	G	A	SNP	DNAJC3	ENST00000602402	human	ensembl	74_37	+1	known	missense	c.490	p.A164T	0.863	pfscan_TPR-contain_dom	pfam_TPR_1,pfam_DnaJ_domain,smart_TPR_repeat,smart_DnaJ_domain,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJC3	HGNC	ENSG00000102580	tier1	-	-	50	0	0.00	28	6	17.65
DPP10	0	genome.wustl.edu	37	2	115822281	115822281	+	RNA	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	2	115822281	115822281	G	T	SNP	DPP10	ENST00000492708	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	DPP10	HGNC	ENSG00000175497	tier1	-	-	111	0	0.00	93	44	32.12
DPP10	0	genome.wustl.edu	37	2	116447470	116447470	+	Silent	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	2	116447470	116447470	G	A	SNP	DPP10	ENST00000393147	human	ensembl	74_37	+1	known	silent	c.561	p.A187	0.959	pfam_Peptidase_S9B	pfam_Peptidase_S9B,pfam_Peptidase_S9	-	no_errors	DPP10	HGNC	ENSG00000175497	tier1	-	-	36	0	0.00	18	12	40.00
DPYS	0	genome.wustl.edu	37	8	105436539	105436539	+	Missense_Mutation	SNP	T	T	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	8	105436539	105436539	T	C	SNP	DPYS	ENST00000351513	human	ensembl	74_37	-1	known	missense	c.1171	p.R391G	1.000	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	-	no_errors	DPYS	HGNC	ENSG00000147647	tier1	-	-	63	0	0.00	124	14	10.14
DRGX	0	genome.wustl.edu	37	10	50599279	50599279	+	Silent	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	10	50599279	50599279	C	T	SNP	DRGX	ENST00000434016	human	ensembl	74_37	-1	known	silent	c.78	p.S26	0.009	NULL	pfam_Homeobox_dom,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_OAR_dom,pfscan_Homeobox_dom	-	no_errors	DRGX	HGNC	ENSG00000165606	tier1	-	-	30	0	0.00	10	10	50.00
DSCAML1	0	genome.wustl.edu	37	11	117376309	117376309	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	11	117376309	117376309	G	A	SNP	DSCAML1	ENST00000321322	human	ensembl	74_37	-1	known	missense	c.2102	p.S701L	0.996	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DSCAML1	HGNC	ENSG00000177103	tier1	-	-	80	0	0.00	84	15	15.15
EARS2	0	genome.wustl.edu	37	16	23555876	23555876	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	16	23555876	23555876	C	A	SNP	EARS2	ENST00000449606	human	ensembl	74_37	-1	known	missense	c.444	p.E148D	1.000	pfam_Glu/Gln-tRNA-synth_Ib_cat-dom,tigrfam_Glu-tRNA-ligase_bac/mito	pfam_Glu/Gln-tRNA-synth_Ib_cat-dom,superfamily_aa-tRNA-synth_I_codon-bd,prints_Glu/Gln-tRNA-synth,tigrfam_Glu-tRNA-ligase_bac/mito	-	no_errors	EARS2	HGNC	ENSG00000103356	tier1	-	-	27	0	0.00	17	12	41.38
EFCAB1	0	genome.wustl.edu	37	8	49644049	49644049	+	Missense_Mutation	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	8	49644049	49644049	T	G	SNP	EFCAB1	ENST00000262103	human	ensembl	74_37	-1	known	missense	c.72	p.E24D	1.000	NULL	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	-	no_errors	EFCAB1	HGNC	ENSG00000034239	tier1	-	-	35	0	0.00	43	15	25.86
EIF3A	0	genome.wustl.edu	37	10	120830510	120830510	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	10	120830510	120830510	C	T	SNP	EIF3A	ENST00000369144	human	ensembl	74_37	-1	known	missense	c.629	p.R210H	1.000	NULL	pfam_PCI_dom,smart_PCI_dom	-	no_errors	EIF3A	HGNC	ENSG00000107581	tier1	-	-	111	0	0.00	84	25	22.94
ELMSAN1	0	genome.wustl.edu	37	14	74193623	74193623	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	14	74193623	74193623	G	A	SNP	ELMSAN1	ENST00000286523	human	ensembl	74_37	-1	known	missense	c.2215	p.R739C	0.997	pfam_ELM2_dom,pfscan_ELM2_dom	pfam_ELM2_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_ELM2_dom	-	no_errors	ELMSAN1	HGNC	ENSG00000156030	tier1	-	-	59	0	0.00	72	4	5.26
ELP2	0	genome.wustl.edu	37	18	33750037	33750037	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	18	33750037	33750037	G	A	SNP	ELP2	ENST00000358232	human	ensembl	74_37	+1	known	nonsense	c.2088	p.W696*	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	ELP2	HGNC	ENSG00000134759	tier1	-	-	148	0	0.00	80	46	36.51
ENSG00000207832	0	genome.wustl.edu	37	22	23198781	23198781	+	RNA	SNP	T	T	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	22	23198781	23198781	T	A	SNP	ENSG00000207832	ENST00000385097	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.005	-	-	-	no_errors	D87024.1	Clone_based_ensembl_gene	ENSG00000207832	tier1	-	-	77	0	0.00	50	36	41.86
ENSG00000212952	0	genome.wustl.edu	37	9	44402133	44402133	+	Silent	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	9	44402133	44402133	C	T	SNP	ENSG00000212952	ENST00000540551	human	ensembl	74_37	-1	known	silent	c.123	p.A41	0.002	NULL	NULL	-	no_errors	BX088651.1	Clone_based_ensembl_gene	ENSG00000212952	tier1	-	-	46	0	0.00	31	14	31.11
ENSG00000215933	0	genome.wustl.edu	37	X	71372219	71372219	+	RNA	SNP	A	A	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	X	71372219	71372219	A	G	SNP	ENSG00000215933	ENST00000401114	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.003	-	-	-	no_errors	BX119917.1	Clone_based_ensembl_gene	ENSG00000215933	tier1	-	-	45	0	0.00	89	6	6.32
ENSG00000221101	0	genome.wustl.edu	37	6	87183253	87183253	+	RNA	SNP	T	T	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	6	87183253	87183253	T	C	SNP	ENSG00000221101	ENST00000408174	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.060	-	-	-	no_errors	AL391417.1	Clone_based_ensembl_gene	ENSG00000221101	tier1	-	-	64	0	0.00	70	16	18.60
ENSG00000221130	0	genome.wustl.edu	37	11	88845968	88845969	+	RNA	INS	-	-	AC			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	11	88845968	88845969	-	AC	INS	ENSG00000221130	ENST00000408203	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.026:0.027	-	-	-	no_errors	AP001482.1	Clone_based_ensembl_gene	ENSG00000221130	tier1			8	0	0.00	9	6	40.00
ENSG00000222692	0	genome.wustl.edu	37	2	51662261	51662261	+	RNA	SNP	A	A	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	2	51662261	51662261	A	C	SNP	ENSG00000222692	ENST00000410760	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.068	-	-	-	no_errors	AC007402.1	Clone_based_ensembl_gene	ENSG00000222692	tier1	-	-	35	0	0.00	32	6	15.79
ENSG00000234719	0	genome.wustl.edu	37	16	12031444	12031444	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	16	12031444	12031444	G	A	SNP	ENSG00000234719	ENST00000399147	human	ensembl	74_37	-1	putative	missense	c.145	p.P49S	0.023	NULL	NULL	-	no_errors	RP11-166B2.1	Clone_based_vega_gene	ENSG00000234719	tier1	-	-	201	0	0.00	256	63	19.75
ENSG00000251899	0	genome.wustl.edu	37	1	85258800	85258800	+	RNA	SNP	A	A	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	1	85258800	85258800	A	C	SNP	ENSG00000251899	ENST00000516090	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.074	-	-	-	no_errors	AC104169.1	Clone_based_ensembl_gene	ENSG00000251899	tier1	-	-	35	0	0.00	36	21	36.84
ENSG00000257808	0	genome.wustl.edu	37	12	53553787	53553787	+	RNA	SNP	C	C	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	12	53553787	53553787	C	A	SNP	ENSG00000257808	ENST00000550908	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-1136G11.8	Clone_based_vega_gene	ENSG00000257808	tier1	-	-	16	0	0.00	16	7	30.43
ENSG00000258661	0	genome.wustl.edu	37	14	37117219	37117219	+	RNA	SNP	C	C	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	14	37117219	37117219	C	A	SNP	ENSG00000258661	ENST00000555107	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-964E11.2	Clone_based_vega_gene	ENSG00000258661	tier1	-	-	139	0	0.00	85	24	22.02
ENSG00000262413	0	genome.wustl.edu	37	17	79826044	79826044	+	RNA	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	17	79826044	79826044	G	A	SNP	ENSG00000262413	ENST00000576021	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-498C9.3	Clone_based_vega_gene	ENSG00000262413	tier1	-	-	72	0	0.00	33	51	60.71
ENSG00000263891	0	genome.wustl.edu	37	7	63361498	63361498	+	RNA	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	7	63361498	63361498	T	G	SNP	ENSG00000263891	ENST00000585312	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.003	-	-	-	no_errors	AC092634.1	Clone_based_ensembl_gene	ENSG00000263891	tier1	-	-	27	0	0.00	15	9	37.50
ENSG00000266560	0	genome.wustl.edu	37	X	151284158	151284158	+	RNA	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	X	151284158	151284158	T	G	SNP	ENSG00000266560	ENST00000509345	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	RP11-1007I13.4	Clone_based_vega_gene	ENSG00000266560	tier1	-	-	28	0	0.00	51	23	30.67
ENSG00000267970	0	genome.wustl.edu	37	7	48887563	48887563	+	Silent	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	7	48887563	48887563	C	T	SNP	ENSG00000267970	ENST00000596947	human	ensembl	74_37	+1	known	silent	c.63	p.R21	0.070	NULL	NULL	-	no_errors	AC004899.1	Clone_based_ensembl_gene	ENSG00000267970	tier1	-	-	58	0	0.00	35	14	28.57
ENSG00000269175	0	genome.wustl.edu	37	1	101456192	101456193	+	Frame_Shift_Ins	INS	-	-	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	1	101456192	101456193	-	A	INS	ENSG00000269175	ENST00000593496	human	ensembl	74_37	+1	known	frame_shift_ins	c.186_187	p.R65fs	0.576:0.002	NULL	NULL	-	no_errors	AC093157.1	Clone_based_ensembl_gene	ENSG00000269175	tier1			24	0	0.00	35	6	14.63
ENSG00000271155	0	genome.wustl.edu	37	9	98268576	98268576	+	RNA	SNP	G	G	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	9	98268576	98268576	G	C	SNP	ENSG00000271155	ENST00000604104	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.971	-	-	-	no_errors	RP11-435O5.5	Clone_based_vega_gene	ENSG00000271155	tier1	-	-	14	0	0.00	2	7	77.78
ENSG00000271894	0	genome.wustl.edu	37	2	56612188	56612188	+	RNA	DEL	T	T	-			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	2	56612188	56612188	T	-	DEL	ENSG00000271894	ENST00000607540	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	RP11-482H16.1	Clone_based_vega_gene	ENSG00000271894	tier1			43	0	0.00	40	12	23.08
ENSG00000272299	0	genome.wustl.edu	37	13	64411581	64411581	+	RNA	DEL	A	A	-			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	13	64411581	64411581	A	-	DEL	ENSG00000272299	ENST00000606894	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.288	-	-	-	no_errors	RP11-394A14.4	Clone_based_vega_gene	ENSG00000272299	tier1			15	0	0.00	11	5	31.25
EPHA5	0	genome.wustl.edu	37	4	66201750	66201750	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	4	66201750	66201750	C	T	SNP	EPHA5	ENST00000273854	human	ensembl	74_37	-1	known	missense	c.2752	p.E918K	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_ephrin_rcpt,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pirsf_Tyr_kinase_ephrin_rcpt,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHA5	HGNC	ENSG00000145242	tier1	-	-	34	0	0.00	28	13	31.71
EXT1	0	genome.wustl.edu	37	8	118825191	118825191	+	Frame_Shift_Del	DEL	T	T	-			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	8	118825191	118825191	T	-	DEL	EXT1	ENST00000378204	human	ensembl	74_37	-1	known	frame_shift_del	c.1642	p.S548fs	1.000	pfam_HexNAc_Trfase_a	pfam_HexNAc_Trfase_a,pfam_Exostosin	-	no_errors	EXT1	HGNC	ENSG00000182197	tier1			19	0	0.00	16	49	75.38
FAM102B	0	genome.wustl.edu	37	1	109148850	109148850	+	Frame_Shift_Del	DEL	A	A	-			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	1	109148850	109148850	A	-	DEL	FAM102B	ENST00000370035	human	ensembl	74_37	+1	known	frame_shift_del	c.264	p.G90fs	1.000	pfam_NT-C2	pfam_NT-C2	-	no_errors	FAM102B	HGNC	ENSG00000162636	tier1			84	0	0.00	74	27	26.73
FAM174A	0	genome.wustl.edu	37	5	99921888	99921888	+	Silent	SNP	A	A	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	5	99921888	99921888	A	G	SNP	FAM174A	ENST00000312637	human	ensembl	74_37	+1	known	silent	c.573	p.*191	1.000	NULL	pfam_DUF1180	-	no_errors	FAM174A	HGNC	ENSG00000174132	tier1	-	-	24	0	0.00	21	18	46.15
FAM182A	0	genome.wustl.edu	37	20	26061832	26061832	+	RNA	SNP	A	A	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	20	26061832	26061832	A	C	SNP	FAM182A	ENST00000376398	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.200	-	-	-	no_errors	FAM182A	HGNC	ENSG00000125804	tier1	-	-	26	0	0.00	18	7	28.00
FAM71C	0	genome.wustl.edu	37	12	100043066	100043066	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	12	100043066	100043066	G	A	SNP	FAM71C	ENST00000324341	human	ensembl	74_37	+1	known	missense	c.616	p.G206R	0.003	NULL	pfam_DUF3699	-	no_errors	FAM71C	HGNC	ENSG00000180219	tier1	-	-	47	0	0.00	68	10	12.82
FAT4	0	genome.wustl.edu	37	4	126336175	126336175	+	Silent	SNP	A	A	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	4	126336175	126336175	A	G	SNP	FAT4	ENST00000394329	human	ensembl	74_37	+1	known	silent	c.6057	p.Q2019	0.958	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159	tier1	-	-	49	0	0.00	28	16	35.56
FHL5	0	genome.wustl.edu	37	6	97063607	97063607	+	Missense_Mutation	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	6	97063607	97063607	T	G	SNP	FHL5	ENST00000326771	human	ensembl	74_37	+1	known	missense	c.814	p.F272V	1.000	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	FHL5	HGNC	ENSG00000112214	tier1	-	-	12	0	0.00	16	12	42.86
FLJ22763	0	genome.wustl.edu	37	3	108868897	108868897	+	RNA	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	3	108868897	108868897	G	A	SNP	FLJ22763	ENST00000467240	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-59E19.1	Clone_based_vega_gene	ENSG00000241224				9	0	0.00	23	3	11.54
FNDC3B	0	genome.wustl.edu	37	3	172050929	172050929	+	Silent	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	3	172050929	172050929	G	T	SNP	FNDC3B	ENST00000336824	human	ensembl	74_37	+1	known	silent	c.1605	p.V535	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	FNDC3B	HGNC	ENSG00000075420				22	0	0.00	57	4	6.56
GABRA6	0	genome.wustl.edu	37	5	161117215	161117215	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	5	161117215	161117215	G	T	SNP	GABRA6	ENST00000274545	human	ensembl	74_37	+1	known	missense	c.682	p.V228F	0.996	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAa_rcpt,prints_GABAA_rcpt,prints_GABBAa6_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRA6	HGNC	ENSG00000145863	tier1	-	-	63	0	0.00	55	4	6.78
GNAS	0	genome.wustl.edu	37	20	57430199	57430199	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	20	57430199	57430199	C	T	SNP	GNAS	ENST00000371100	human	ensembl	74_37	+1	putative	nonsense	c.1879	p.Q627*	0.001	NULL	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_S,prints_Gprotein_alpha_su	-	no_errors	GNAS	HGNC	ENSG00000087460	tier1	-	-	34	0	0.00	32	20	38.46
GOLGB1	0	genome.wustl.edu	37	3	121383820	121383820	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	3	121383820	121383820	G	A	SNP	GOLGB1	ENST00000340645	human	ensembl	74_37	-1	known	nonsense	c.9598	p.Q3200*	0.996	NULL	superfamily_Prefoldin,superfamily_STAT_TF_coiled-coil,smart_Leu_zip_homeo	-	no_errors	GOLGB1	HGNC	ENSG00000173230	tier1	-	-	50	0	0.00	88	25	22.12
GPRASP2	0	genome.wustl.edu	37	X	101971323	101971323	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	X	101971323	101971323	G	A	SNP	GPRASP2	ENST00000332262	human	ensembl	74_37	+1	known	missense	c.1526	p.R509Q	0.674	NULL	pfam_ARM-rpt_dom,superfamily_ARM-type_fold	-	no_errors	GPRASP2	HGNC	ENSG00000158301	tier1	-	-	25	0	0.00	20	12	37.50
GRM1	0	genome.wustl.edu	37	6	146350735	146350735	+	Missense_Mutation	SNP	T	T	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	6	146350735	146350735	T	A	SNP	GRM1	ENST00000282753	human	ensembl	74_37	+1	known	missense	c.82	p.L28M	0.001	prints_GPCR_3_mtglu_rcpt_1	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Metabotropic_Glu_rcpt_Homer-bd,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3_mtglu_rcpt_1,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_5	-	no_errors	GRM1	HGNC	ENSG00000152822	tier1	-	-	30	0	0.00	26	35	57.38
GRM7	0	genome.wustl.edu	37	3	7188173	7188173	+	Missense_Mutation	SNP	A	A	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	3	7188173	7188173	A	G	SNP	GRM7	ENST00000402647	human	ensembl	74_37	+1	known	missense	c.554	p.E185G	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_7,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_4	-	no_errors	GRM7	HGNC	ENSG00000196277	tier1	-	-	37	0	0.00	26	20	43.48
GUCY1A2	0	genome.wustl.edu	37	11	106680972	106680972	+	Frame_Shift_Del	DEL	T	T	-			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	11	106680972	106680972	T	-	DEL	GUCY1A2	ENST00000282249	human	ensembl	74_37	-1	known	frame_shift_del	c.1439	p.H480fs	1.000	pfam_Haem_no_assoc-bd	pfam_Haem_no_assoc-bd,pfam_A/G_cyclase,pfam_Heme_NO-bd,superfamily_A/G_cyclase,superfamily_NO_sig/Golgi_transp_ligand-bd,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	GUCY1A2	HGNC	ENSG00000152402	tier1			54	0	0.00	29	23	44.23
HCK	0	genome.wustl.edu	37	20	30659496	30659496	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	20	30659496	30659496	G	T	SNP	HCK	ENST00000375852	human	ensembl	74_37	+1	known	missense	c.94	p.V32F	0.000	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_SH3_domain	-	no_errors	HCK	HGNC	ENSG00000101336	tier1	-	-	63	0	0.00	80	18	18.37
HCN1	0	genome.wustl.edu	37	5	45645460	45645460	+	Missense_Mutation	SNP	A	A	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	5	45645460	45645460	A	G	SNP	HCN1	ENST00000303230	human	ensembl	74_37	-1	known	missense	c.676	p.F226L	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_N,pfam_cNMP-bd_dom,pfam_Ion_trans_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG	-	no_errors	HCN1	HGNC	ENSG00000164588	tier1	-	-	35	0	0.00	28	14	33.33
HDAC9	0	genome.wustl.edu	37	7	18806744	18806744	+	Missense_Mutation	SNP	A	A	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	7	18806744	18806744	A	C	SNP	HDAC9	ENST00000441542	human	ensembl	74_37	+1	known	missense	c.2180	p.K727T	1.000	pfam_His_deacetylse_dom,pirsf_Histone_deAcase_II_euk	pfam_His_deacetylse_dom,pfam_Hist_deacetylase_Gln_rich_N,pirsf_Histone_deAcase_II_euk,prints_His_deacetylse	-	no_errors	HDAC9	HGNC	ENSG00000048052	tier1	-	-	61	0	0.00	26	14	35.00
HEPH	0	genome.wustl.edu	37	X	65486415	65486415	+	Silent	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	X	65486415	65486415	T	G	SNP	HEPH	ENST00000519389	human	ensembl	74_37	+1	known	silent	c.3540	p.L1180	0.249	NULL	pfam_Cu-oxidase_3,pfam_Cu-oxidase_2,superfamily_Cupredoxin	-	no_errors	HEPH	HGNC	ENSG00000089472	tier1	-	-	37	0	0.00	69	5	6.76
HMBS	0	genome.wustl.edu	37	11	118960710	118960710	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	11	118960710	118960710	C	A	SNP	HMBS	ENST00000278715	human	ensembl	74_37	+1	known	missense	c.355	p.P119T	1.000	pfam_Porphobilin_deaminase_N,pirsf_4pyrrol_synth_OHMeBilane_synth,tigrfam_4pyrrol_synth_OHMeBilane_synth	pfam_Porphobilin_deaminase_N,pfam_Porphobilinogen_deaminase_C,superfamily_Porphobilinogen_deaminase_C,pirsf_4pyrrol_synth_OHMeBilane_synth,prints_4pyrrol_synth_OHMeBilane_synth,tigrfam_4pyrrol_synth_OHMeBilane_synth	-	no_errors	HMBS	HGNC	ENSG00000256269	tier1	-	-	67	0	0.00	80	9	10.11
HNRNPUL1	0	genome.wustl.edu	37	19	41807528	41807528	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	19	41807528	41807528	G	A	SNP	HNRNPUL1	ENST00000392006	human	ensembl	74_37	+1	known	missense	c.1606	p.E536K	1.000	superfamily_P-loop_NTPase	pfam_SPRY_rcpt,pfam_SAP_dom,superfamily_ConA-like_lec_gl_sf,superfamily_P-loop_NTPase,smart_SAP_dom,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_SAP_dom	-	no_errors	HNRNPUL1	HGNC	ENSG00000105323	tier1	-	-	28	0	0.00	37	12	24.49
HSPA4L	0	genome.wustl.edu	37	4	128726323	128726323	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	4	128726323	128726323	G	C	SNP	HSPA4L	ENST00000439123	human	ensembl	74_37	+1	known	missense	c.1174	p.D392H	1.000	pfam_Hsp_70_fam,pfam_MreB_Mrl	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPA4L	HGNC	ENSG00000164070	tier1	-	-	36	0	0.00	15	13	46.43
IGSF22	0	genome.wustl.edu	37	11	18733790	18733790	+	Missense_Mutation	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	11	18733790	18733790	T	G	SNP	IGSF22	ENST00000513874	human	ensembl	74_37	-1	known	missense	c.2237	p.K746T	0.974	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGSF22	HGNC	ENSG00000179057	tier1	-	-	84	0	0.00	54	32	37.21
INHBA	0	genome.wustl.edu	37	7	41730006	41730006	+	Frame_Shift_Del	DEL	G	G	-			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	7	41730006	41730006	G	-	DEL	INHBA	ENST00000242208	human	ensembl	74_37	-1	known	frame_shift_del	c.523	p.L175fs	0.999	pfam_TGF-b_N	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C,prints_Inhibin_betaA,prints_Inhibin_asu	-	no_errors	INHBA	HGNC	ENSG00000122641	tier1			30	0	0.00	41	23	35.94
IVL	0	genome.wustl.edu	37	1	152882791	152882791	+	Missense_Mutation	SNP	T	T	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	1	152882791	152882791	T	C	SNP	IVL	ENST00000368764	human	ensembl	74_37	+1	known	missense	c.518	p.L173P	0.000	pfam_Involucrin_rpt	pfam_Involucrin_N,pfam_Involucrin_rpt	-	no_errors	IVL	HGNC	ENSG00000163207	tier1	-	-	50	0	0.00	76	20	20.83
KCNA1	0	genome.wustl.edu	37	12	5021058	5021058	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	12	5021058	5021058	G	A	SNP	KCNA1	ENST00000382545	human	ensembl	74_37	+1	known	missense	c.514	p.V172I	0.996	prints_K_chnl,prints_K_chnl_volt-dep_Kv1	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv1.1,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv1.3	-	no_errors	KCNA1	HGNC	ENSG00000111262	tier1	-	-	40	0	0.00	28	22	44.00
KCNH2	0	genome.wustl.edu	37	7	150648207	150648207	+	Silent	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	7	150648207	150648207	G	A	SNP	KCNH2	ENST00000262186	human	ensembl	74_37	-1	known	silent	c.1947	p.S649	0.994	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_cNMP-bd_dom,pfam_PAS_fold,pfam_PAS_fold_3,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH2	HGNC	ENSG00000055118	tier1	-	-	22	0	0.00	15	5	25.00
KIAA1024	0	genome.wustl.edu	37	15	79755565	79755565	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	15	79755565	79755565	G	A	SNP	KIAA1024	ENST00000305428	human	ensembl	74_37	+1	known	missense	c.2455	p.E819K	0.994	pfam_UPF0258	pfam_UPF0258	-	no_errors	KIAA1024	HGNC	ENSG00000169330	tier1	-	-	29	0	0.00	7	14	66.67
KIAA1109	0	genome.wustl.edu	37	4	123264574	123264574	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	4	123264574	123264574	G	T	SNP	KIAA1109	ENST00000264501	human	ensembl	74_37	+1	known	missense	c.12362	p.G4121V	0.755	NULL	pfam_Fragile_site-assoc_C	-	no_errors	KIAA1109	HGNC	ENSG00000138688	tier1	-	-	53	0	0.00	32	21	39.62
KIAA1210	0	genome.wustl.edu	37	X	118221265	118221265	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	X	118221265	118221265	C	G	SNP	KIAA1210	ENST00000402510	human	ensembl	74_37	-1	known	missense	c.3928	p.V1310L	0.000	NULL	NULL	-	no_errors	KIAA1210	HGNC	ENSG00000250423	tier1	-	-	28	0	0.00	38	20	34.48
KIAA1755	0	genome.wustl.edu	37	20	36870238	36870238	+	Missense_Mutation	SNP	A	A	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	20	36870238	36870238	A	C	SNP	KIAA1755	ENST00000279024	human	ensembl	74_37	-1	known	missense	c.295	p.L99V	0.081	NULL	superfamily_CRAL-TRIO_dom	-	no_errors	KIAA1755	HGNC	ENSG00000149633	tier1	-	-	48	0	0.00	47	16	25.40
KIAA1841	0	genome.wustl.edu	37	2	61345225	61345225	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	2	61345225	61345225	C	T	SNP	KIAA1841	ENST00000356719	human	ensembl	74_37	+1	known	nonsense	c.2002	p.R668*	1.000	NULL	pfam_DUF3342,superfamily_BTB/POZ_fold,superfamily_Homeodomain-like	-	no_errors	KIAA1841	HGNC	ENSG00000162929	tier1	-	-	43	0	0.00	54	5	8.47
KIAA2018	0	genome.wustl.edu	37	3	113378632	113378632	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	3	113378632	113378632	G	A	SNP	KIAA2018	ENST00000316407	human	ensembl	74_37	-1	known	missense	c.1897	p.L633F	1.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	KIAA2018	HGNC	ENSG00000176542	tier1	-	-	56	0	0.00	38	90	70.31
KIF22	0	genome.wustl.edu	37	16	29810459	29810459	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	16	29810459	29810459	G	A	SNP	KIF22	ENST00000160827	human	ensembl	74_37	+1	known	missense	c.713	p.R238Q	1.000	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,superfamily_RuvA_2-like,smart_Kinesin_motor_dom,smart_Hlx-hairpin-Hlx_DNA-bd_motif,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF22	HGNC	ENSG00000079616	tier1	-	-	41	0	0.00	26	9	25.71
KIF5B	0	genome.wustl.edu	37	10	32307483	32307483	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	10	32307483	32307483	G	T	SNP	KIF5B	ENST00000302418	human	ensembl	74_37	-1	known	missense	c.2314	p.Q772K	1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF5B	HGNC	ENSG00000170759	tier1	-	-	64	0	0.00	70	24	25.53
KLHL13	0	genome.wustl.edu	37	X	117033237	117033237	+	Silent	SNP	T	T	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	X	117033237	117033237	T	C	SNP	KLHL13	ENST00000539496	human	ensembl	74_37	-1	known	silent	c.1611	p.G537	1.000	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL13	HGNC	ENSG00000003096	tier1	-	-	27	0	0.00	30	25	45.45
KLRG1	0	genome.wustl.edu	37	12	9144868	9144868	+	Missense_Mutation	SNP	T	T	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	12	9144868	9144868	T	C	SNP	KLRG1	ENST00000266551	human	ensembl	74_37	+1	known	missense	c.149	p.L50P	0.724	NULL	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	KLRG1	HGNC	ENSG00000139187	tier1	-	-	49	0	0.00	23	12	34.29
L3MBTL4	0	genome.wustl.edu	37	18	6171916	6171916	+	Missense_Mutation	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	18	6171916	6171916	T	G	SNP	L3MBTL4	ENST00000284898	human	ensembl	74_37	-1	known	missense	c.1007	p.K336T	0.999	pfam_Mbt,smart_Mbt,pfscan_Mbt	pfam_Mbt,pfam_SAM_type1,pfam_Znf_C2HC,pfam_SAM_2,superfamily_SAM/pointed,smart_Mbt,smart_SAM,pfscan_Mbt,pfscan_SAM	-	no_errors	L3MBTL4	HGNC	ENSG00000154655	tier1	-	-	35	0	0.00	42	16	27.59
LAS1L	0	genome.wustl.edu	37	X	64743982	64743982	+	Nonsense_Mutation	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	X	64743982	64743982	G	T	SNP	LAS1L	ENST00000374811	human	ensembl	74_37	-1	known	nonsense	c.1254	p.Y418*	1.000	NULL	pfam_Las1	-	no_errors	LAS1L	HGNC	ENSG00000001497				21	0	0.00	30	3	9.09
LCN15	0	genome.wustl.edu	37	9	139656718	139656718	+	Frame_Shift_Del	DEL	G	G	-			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	9	139656718	139656718	G	-	DEL	LCN15	ENST00000316144	human	ensembl	74_37	-1	known	frame_shift_del	c.442	p.Q148fs	0.341	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_PstgldnD_synth,prints_Lipocalin,prints_A1-microglobln,prints_Blactoglobulin	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_PstgldnD_synth,prints_Lipocalin,prints_A1-microglobln,prints_Blactoglobulin	-	no_errors	LCN15	HGNC	ENSG00000177984	tier1			23	0	0.00	20	3	13.04
LDB2	0	genome.wustl.edu	37	4	16900100	16900100	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	4	16900100	16900100	G	T	SNP	LDB2	ENST00000304523	human	ensembl	74_37	-1	known	missense	c.9	p.S3R	1.000	NULL	NULL	-	no_errors	LDB2	HGNC	ENSG00000169744	tier1	-	-	69	0	0.00	45	12	20.69
LILRA3	0	genome.wustl.edu	37	19	54802638	54802638	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	19	54802638	54802638	C	T	SNP	LILRA3	ENST00000251390	human	ensembl	74_37	-1	known	missense	c.803	p.R268H	0.000	smart_Ig_sub,smart_Ig_sub2,pirsf_A1B_glyco/leuk_Ig-like_rcpt,pfscan_Ig-like_dom	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pirsf_A1B_glyco/leuk_Ig-like_rcpt,pfscan_Ig-like_dom	-	no_errors	LILRA3	HGNC	ENSG00000170866	tier1	-	-	71	0	0.00	122	13	9.63
LILRA4	0	genome.wustl.edu	37	19	54849483	54849483	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	19	54849483	54849483	C	T	SNP	LILRA4	ENST00000291759	human	ensembl	74_37	-1	known	missense	c.379	p.A127T	0.035	pirsf_A1B_glyco/leuk_Ig-like_rcpt,pfscan_Ig-like_dom	smart_Ig_sub,smart_Ig_sub2,pirsf_A1B_glyco/leuk_Ig-like_rcpt,pfscan_Ig-like_dom	-	no_errors	LILRA4	HGNC	ENSG00000239961	tier1	-	-	38	0	0.00	77	29	27.36
LINC00969	0	genome.wustl.edu	37	3	195410697	195410697	+	RNA	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	3	195410697	195410697	G	A	SNP	LINC00969	ENST00000414625	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	LINC00969	HGNC	ENSG00000242086	tier1	-	-	77	0	0.00	108	23	17.56
LIPI	0	genome.wustl.edu	37	21	15535844	15535844	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	21	15535844	15535844	C	T	SNP	LIPI	ENST00000344577	human	ensembl	74_37	-1	known	missense	c.965	p.G322D	1.000	pfam_Lipase_N,pirsf_Lipoprotein_lipase_LIPH	pfam_Lipase_N,pirsf_Lipoprotein_lipase_LIPH,prints_Lipase	-	no_errors	LIPI	HGNC	ENSG00000188992	tier1	-	-	44	0	0.00	36	5	12.20
LOC100289283	0	genome.wustl.edu	37	16	29821983	29821984	+	RNA	INS	-	-	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	16	29821983	29821984	-	T	INS	LOC100289283	ENST00000569981	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	AC009133.14	Clone_based_vega_gene	ENSG00000238045	tier1			31	0	0.00	22	3	12.00
LOC100289580	0	genome.wustl.edu	37	16	88804630	88804630	+	RNA	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	16	88804630	88804630	G	A	SNP	LOC100289580	ENST00000440406	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.386	-	-	-	no_errors	RP5-1142A6.2	Clone_based_vega_gene	ENSG00000224888	tier1	-	-	23	0	0.00	29	4	12.12
LOC101927188	0	genome.wustl.edu	37	18	6956263	6956263	+	RNA	DEL	T	T	-			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	18	6956263	6956263	T	-	DEL	LOC101927188	ENST00000584722	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-781P6.1	Clone_based_vega_gene	ENSG00000265069	tier1			14	0	0.00	14	6	30.00
LOC283683	0	genome.wustl.edu	37	15	23108650	23108650	+	RNA	DEL	T	T	-			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	15	23108650	23108650	T	-	DEL	LOC283683	ENST00000561063	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	RP11-566K19.6	Clone_based_vega_gene	ENSG00000259344	tier1			31	0	0.00	16	13	44.83
LRIG1	0	genome.wustl.edu	37	3	66460607	66460607	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	3	66460607	66460607	G	A	SNP	LRIG1	ENST00000273261	human	ensembl	74_37	-1	known	missense	c.881	p.S294F	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Cys-rich_flank_reg_C,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRIG1	HGNC	ENSG00000144749	tier1	-	-	40	0	0.00	21	5	19.23
LRP1B	0	genome.wustl.edu	37	2	141208225	141208225	+	Silent	SNP	A	A	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	2	141208225	141208225	A	G	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	silent	c.9969	p.R3323	0.936	pfam_LDrepeatLR_classA_rpt,superfamily_Growth_fac_rcpt_N_dom,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702				16	0	0.00	19	4	17.39
LRRC1	0	genome.wustl.edu	37	6	53660182	53660182	+	Missense_Mutation	SNP	T	T	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	6	53660182	53660182	T	A	SNP	LRRC1	ENST00000370888	human	ensembl	74_37	+1	known	missense	c.128	p.L43Q	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC1	HGNC	ENSG00000137269	tier1	-	-	53	0	0.00	51	14	21.54
LRRC4C	0	genome.wustl.edu	37	11	40136104	40136104	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	11	40136104	40136104	G	C	SNP	LRRC4C	ENST00000527150	human	ensembl	74_37	-1	known	missense	c.1739	p.P580R	1.000	NULL	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	LRRC4C	HGNC	ENSG00000148948	tier1	-	-	73	0	0.00	85	24	22.02
LRRC4C	0	genome.wustl.edu	37	11	40136422	40136422	+	Missense_Mutation	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	11	40136422	40136422	T	G	SNP	LRRC4C	ENST00000527150	human	ensembl	74_37	-1	known	missense	c.1421	p.N474T	1.000	NULL	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	LRRC4C	HGNC	ENSG00000148948	tier1	-	-	72	0	0.00	72	22	23.40
LRTM1	0	genome.wustl.edu	37	3	54958788	54958788	+	Missense_Mutation	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	3	54958788	54958788	T	G	SNP	LRTM1	ENST00000273286	human	ensembl	74_37	-1	known	missense	c.462	p.Q154H	0.124	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	LRTM1	HGNC	ENSG00000144771	tier1	-	-	19	0	0.00	23	5	17.86
LZTR1	0	genome.wustl.edu	37	22	21348441	21348441	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	22	21348441	21348441	G	T	SNP	LZTR1	ENST00000215739	human	ensembl	74_37	+1	known	missense	c.1498	p.A500S	0.017	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_Kelch_1,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_Kelch_1,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	LZTR1	HGNC	ENSG00000099949	tier1	-	-	53	0	0.00	18	47	72.31
MACROD2	0	genome.wustl.edu	37	20	16021881	16021881	+	Missense_Mutation	SNP	A	A	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	20	16021881	16021881	A	G	SNP	MACROD2	ENST00000310348	human	ensembl	74_37	+1	known	missense	c.1189	p.S397G	0.053	NULL	pfam_Macro_dom,smart_Macro_dom,pfscan_Macro_dom	-	no_errors	MACROD2	HGNC	ENSG00000172264	tier1	-	-	27	0	0.00	30	12	25.53
MADD	0	genome.wustl.edu	37	11	47305736	47305736	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	11	47305736	47305736	G	T	SNP	MADD	ENST00000311027	human	ensembl	74_37	+1	known	missense	c.1870	p.D624Y	1.000	NULL	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	MADD	HGNC	ENSG00000110514	tier1	-	-	49	0	0.00	57	4	6.56
MAGEA12	0	genome.wustl.edu	37	X	151900433	151900433	+	Missense_Mutation	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	X	151900433	151900433	T	G	SNP	MAGEA12	ENST00000357916	human	ensembl	74_37	-1	known	missense	c.368	p.K123T	0.015	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEA12	HGNC	ENSG00000213401	tier1	-	-	61	0	0.00	101	43	29.86
MAP1A	0	genome.wustl.edu	37	15	43815519	43815520	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	15	43815519	43815520	AG	-	DEL	MAP1A	ENST00000399453	human	ensembl	74_37	+1	known	frame_shift_del	c.1848_1849	p.E617fs	0.002:0.889	NULL	NULL	-	no_errors	MAP1A	HGNC	ENSG00000166963	tier1			15	0	0.00	22	12	35.29
MARCH4	0	genome.wustl.edu	37	2	217148414	217148414	+	Silent	SNP	G	G	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	2	217148414	217148414	G	C	SNP	MARCH4	ENST00000273067	human	ensembl	74_37	-1	known	silent	c.555	p.V185	1.000	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH	-	no_errors	MARCH4	HGNC	ENSG00000144583	tier1	-	-	45	0	0.00	41	19	31.67
MARCH8	0	genome.wustl.edu	37	10	45958757	45958757	+	Silent	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	10	45958757	45958757	G	A	SNP	MARCH8	ENST00000453424	human	ensembl	74_37	-1	putative	silent	c.930	p.D310	0.902	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH,pfscan_Znf_RING	-	no_errors	MARCH8	HGNC	ENSG00000165406	tier1	-	-	33	0	0.00	33	7	17.50
MARCO	0	genome.wustl.edu	37	2	119727832	119727832	+	Missense_Mutation	SNP	A	A	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	2	119727832	119727832	A	T	SNP	MARCO	ENST00000327097	human	ensembl	74_37	+1	known	missense	c.342	p.Q114H	0.007	NULL	pfam_Collagen,pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_SRCR	-	no_errors	MARCO	HGNC	ENSG00000019169	tier1	-	-	26	0	0.00	24	9	27.27
MARK1	0	genome.wustl.edu	37	1	220825478	220825478	+	Silent	SNP	A	A	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	1	220825478	220825478	A	G	SNP	MARK1	ENST00000366917	human	ensembl	74_37	+1	known	silent	c.1722	p.E574	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_KA1_dom,superfamily_Kinase-like_dom,superfamily_KA1/Ssp2_C,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_UBA/transl_elong_EF1B_N_euk,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom	-	no_errors	MARK1	HGNC	ENSG00000116141	tier1	-	-	48	0	0.00	31	22	41.51
MARK1	0	genome.wustl.edu	37	1	220835336	220835336	+	Missense_Mutation	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	1	220835336	220835336	T	G	SNP	MARK1	ENST00000366917	human	ensembl	74_37	+1	known	missense	c.2216	p.L739W	1.000	superfamily_KA1/Ssp2_C	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_KA1_dom,superfamily_Kinase-like_dom,superfamily_KA1/Ssp2_C,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_UBA/transl_elong_EF1B_N_euk,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom	-	no_errors	MARK1	HGNC	ENSG00000116141	tier1	-	-	42	0	0.00	36	13	26.53
MEG3	0	genome.wustl.edu	37	14	101300927	101300927	+	RNA	SNP	C	C	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	14	101300927	101300927	C	G	SNP	MEG3	ENST00000398461	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MEG3	HGNC	ENSG00000214548	tier1	-	-	29	0	0.00	28	11	28.21
MEG3	0	genome.wustl.edu	37	14	101324951	101324951	+	RNA	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	14	101324951	101324951	G	A	SNP	MEG3	ENST00000398460	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	MEG3	HGNC	ENSG00000214548	tier1	-	-	36	0	0.00	32	10	23.81
MFSD6L	0	genome.wustl.edu	37	17	8702166	8702166	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	17	8702166	8702166	G	T	SNP	MFSD6L	ENST00000329805	human	ensembl	74_37	-1	known	missense	c.273	p.S91R	0.978	superfamily_MFS_dom_general_subst_transpt	superfamily_MFS_dom_general_subst_transpt	-	no_errors	MFSD6L	HGNC	ENSG00000185156	tier1	-	-	62	0	0.00	58	5	7.94
MGAT1	0	genome.wustl.edu	37	5	180218677	180218677	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	5	180218677	180218677	G	A	SNP	MGAT1	ENST00000307826	human	ensembl	74_37	-1	known	missense	c.1295	p.A432V	0.998	pfam_Glyco_trans_13	pfam_Glyco_trans_13	-	no_errors	MGAT1	HGNC	ENSG00000131446	tier1	-	-	18	0	0.00	18	9	33.33
MIER1	0	genome.wustl.edu	37	1	67424600	67424600	+	Nonsense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	1	67424600	67424600	C	T	SNP	MIER1	ENST00000401041	human	ensembl	74_37	+1	known	nonsense	c.568	p.Q190*	0.997	NULL	pfam_ELM2_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_ELM2_dom	-	no_errors	MIER1	HGNC	ENSG00000198160	tier1	-	-	44	0	0.00	38	16	29.63
MMP24-AS1	0	genome.wustl.edu	37	20	33864536	33864536	+	RNA	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	20	33864536	33864536	C	T	SNP	MMP24-AS1	ENST00000435366	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.994	-	-	-	no_errors	MMP24-AS1	HGNC	ENSG00000126005	tier1	-	-	27	0	0.00	35	12	25.53
MMS22L	0	genome.wustl.edu	37	6	97597747	97597747	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	6	97597747	97597747	C	T	SNP	MMS22L	ENST00000275053	human	ensembl	74_37	-1	known	missense	c.3632	p.G1211D	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	MMS22L	HGNC	ENSG00000146263	tier1	-	-	28	0	0.00	28	16	36.36
MOCS1	0	genome.wustl.edu	37	6	39880116	39880116	+	Silent	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	6	39880116	39880116	G	T	SNP	MOCS1	ENST00000340692	human	ensembl	74_37	-1	known	silent	c.873	p.A291	1.000	pfam_Mob_synth_C,tigrfam_MoaA	pfam_Mopterin_CF_biosynth-C_dom,pfam_Mob_synth_C,pfam_rSAM,superfamily_Mopterin_CF_biosynth-C_dom,smart_Elp3/MiaB/NifB,tigrfam_MoaA,tigrfam_Mo_CF_biosynth-C	-	no_errors	MOCS1	HGNC	ENSG00000124615	tier1	-	-	57	0	0.00	67	23	25.56
MOGAT2	0	genome.wustl.edu	37	11	75439077	75439077	+	Missense_Mutation	SNP	T	T	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	11	75439077	75439077	T	A	SNP	MOGAT2	ENST00000198801	human	ensembl	74_37	+1	known	missense	c.538	p.L180M	0.949	pfam_DAGAT	pfam_DAGAT	-	no_errors	MOGAT2	HGNC	ENSG00000166391				35	0	0.00	52	5	8.77
MSR1	0	genome.wustl.edu	37	8	16026304	16026304	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	8	16026304	16026304	G	A	SNP	MSR1	ENST00000262101	human	ensembl	74_37	-1	known	missense	c.293	p.T98M	0.000	NULL	pfam_SRCR,pfam_Macro_scav_rcpt,pfam_Collagen,superfamily_Srcr_rcpt-rel,superfamily_STAT_TF_coiled-coil,smart_Srcr_rcpt-rel,prints_Macro_scav_rcpt,prints_SRCR,pfscan_SRCR	-	no_errors	MSR1	HGNC	ENSG00000038945	tier1	-	-	61	0	0.00	40	20	33.33
MT-CO2	0	genome.wustl.edu	37	MT	7790	7790	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	MT	7790	7790	C	T	SNP	MT-CO2	ENST00000361739	human	ensembl	74_37	+1	known	missense	c.205	p.P69S	NULL	pfam_Cyt_c_oxidase_su2_TM_dom,superfamily_Cyt_c_oxidase_su2_TM_dom,pfscan_Cyt_c_oxidase_su2_TM_dom,tigrfam_Cyt_c_oxidase_su2	pfam_Cyt_c_oxidase_su2_C,pfam_Cyt_c_oxidase_su2_TM_dom,superfamily_Cupredoxin,superfamily_Cyt_c_oxidase_su2_TM_dom,pfscan_Cyt_c_oxidase_su2_TM_dom,pfscan_Cyt_c_oxidase_su2_C,tigrfam_Cyt_c_oxidase_su2	-	no_errors	MT-CO2	HGNC	ENSG00000198712	tier1	-	-	321	0	0.00	652	267	29.02
MTUS2	0	genome.wustl.edu	37	13	29674973	29674973	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	13	29674973	29674973	G	A	SNP	MTUS2	ENST00000431530	human	ensembl	74_37	+1	known	missense	c.2540	p.R847H	0.996	NULL	NULL	-	no_errors	MTUS2	HGNC	ENSG00000132938	tier1	-	-	91	0	0.00	47	15	24.19
MUC19	0	genome.wustl.edu	37	12	40915464	40915464	+	RNA	SNP	A	A	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	12	40915464	40915464	A	G	SNP	MUC19	ENST00000398702	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	MUC19	HGNC	ENSG00000205592	tier1	-	-	58	0	0.00	64	12	15.79
MYB	0	genome.wustl.edu	37	6	135509008	135509008	+	Missense_Mutation	SNP	A	A	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	6	135509008	135509008	A	G	SNP	MYB	ENST00000341911	human	ensembl	74_37	+1	known	missense	c.178	p.T60A	1.000	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	pfam_C-myb_C,pfam_SANT/Myb,pfam_Tscrpt_reg_Wos2-domain,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	MYB	HGNC	ENSG00000118513	tier1	-	-	68	0	0.00	99	22	18.18
MYEOV	0	genome.wustl.edu	37	11	69063273	69063273	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	11	69063273	69063273	C	T	SNP	MYEOV	ENST00000308946	human	ensembl	74_37	+1	known	missense	c.356	p.A119V	0.046	NULL	NULL	-	no_errors	MYEOV	HGNC	ENSG00000172927				66	0	0.00	70	4	5.41
MYH2	0	genome.wustl.edu	37	17	10431082	10431082	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	17	10431082	10431082	C	T	SNP	MYH2	ENST00000245503	human	ensembl	74_37	-1	known	missense	c.3854	p.R1285H	0.996	pfam_Myosin_tail,superfamily_Prefoldin	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_Ribosomal_L29,superfamily_t-SNARE,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH2	HGNC	ENSG00000125414	tier1	rs148326504	-	33	0	0.00	30	12	28.57
MYOCD	0	genome.wustl.edu	37	17	12656029	12656029	+	Missense_Mutation	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	17	12656029	12656029	T	G	SNP	MYOCD	ENST00000425538	human	ensembl	74_37	+1	known	missense	c.1424	p.F475C	1.000	NULL	pfam_RPEL_repeat,pfam_SAP_dom,smart_RPEL_repeat,smart_SAP_dom,pfscan_RPEL_repeat,pfscan_SAP_dom	-	no_errors	MYOCD	HGNC	ENSG00000141052	tier1	-	-	25	0	0.00	16	5	23.81
MYT1L	0	genome.wustl.edu	37	2	1891271	1891272	+	Frame_Shift_Ins	INS	-	-	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	2	1891271	1891272	-	T	INS	MYT1L	ENST00000399161	human	ensembl	74_37	-1	known	frame_shift_ins	c.2631_2630	p.D878fs	1.000:1.000	NULL	pfam_Myelin_TF,pfam_Znf_C2HC	-	no_errors	MYT1L	HGNC	ENSG00000186487	tier1			75	0	0.00	64	27	29.67
NEFH	0	genome.wustl.edu	37	22	29886193	29886195	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	22	29886193	29886195	AGA	-	DEL	NEFH	ENST00000310624	human	ensembl	74_37	+1	known	in_frame_del	c.2564_2566	p.K857in_frame_del	0.995:0.967:0.974	NULL	pfam_IF,pfam_DUF1388	-	no_errors	NEFH	HGNC	ENSG00000100285	tier1			14	0	0.00	10	6	37.50
NETO1	0	genome.wustl.edu	37	18	70534522	70534522	+	Missense_Mutation	SNP	A	A	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	18	70534522	70534522	A	T	SNP	NETO1	ENST00000327305	human	ensembl	74_37	-1	known	missense	c.5	p.I2N	1.000	NULL	pfam_CUB_dom,pfam_LDrepeatLR_classA_rpt,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_LDrepeatLR_classA_rpt,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt	-	no_errors	NETO1	HGNC	ENSG00000166342	tier1	-	-	15	0	0.00	11	5	31.25
NKPD1	0	genome.wustl.edu	37	19	45655768	45655769	+	In_Frame_Ins	INS	-	-	CTG			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	19	45655768	45655769	-	CTG	INS	NKPD1	ENST00000317951	human	ensembl	74_37	-1	known	in_frame_ins	c.1927_1926	p.642in_frame_insQ	0.836:0.910	NULL	pfam_KAP_NTPase	-	no_errors	NKPD1	HGNC	ENSG00000179846	tier1			26	0	0.00	26	15	36.59
NLRC3	0	genome.wustl.edu	37	16	3614763	3614763	+	RNA	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	16	3614763	3614763	C	T	SNP	NLRC3	ENST00000603055	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NLRC3	HGNC	ENSG00000167984	tier1	-	-	82	0	0.00	59	21	26.25
NLRP13	0	genome.wustl.edu	37	19	56416458	56416458	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	19	56416458	56416458	G	A	SNP	NLRP13	ENST00000342929	human	ensembl	74_37	-1	known	missense	c.2468	p.S823L	0.015	smart_Leu-rich_rpt_RNase_inh_sub-typ	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP13	HGNC	ENSG00000173572	tier1	-	-	61	0	0.00	56	30	34.88
NNT	0	genome.wustl.edu	37	5	43659311	43659311	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	5	43659311	43659311	G	A	SNP	NNT	ENST00000264663	human	ensembl	74_37	+1	known	missense	c.2493	p.M831I	1.000	pfam_NADH_DH_b	pfam_NADH_DH_b,pfam_AlaDH/PNT_NAD(H)-bd,pfam_AlaDH/PNT_N,tigrfam_NADP_transhyd_a	-	no_errors	NNT	HGNC	ENSG00000112992	tier1	-	-	77	0	0.00	57	35	38.04
NOC3L	0	genome.wustl.edu	37	10	96116319	96116319	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	10	96116319	96116319	G	C	SNP	NOC3L	ENST00000371350	human	ensembl	74_37	-1	known	missense	c.538	p.Q180E	0.999	superfamily_ARM-type_fold,pirsf_Nucleolar_cplx-assoc_3	pfam_CCAAT-binding_factor,pfam_NOC3p,superfamily_ARM-type_fold,pirsf_Nucleolar_cplx-assoc_3	-	no_errors	NOC3L	HGNC	ENSG00000173145	tier1	-	-	22	0	0.00	15	8	34.78
NPHS2	0	genome.wustl.edu	37	1	179526362	179526362	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	1	179526362	179526362	C	T	SNP	NPHS2	ENST00000367615	human	ensembl	74_37	-1	known	missense	c.538	p.V180M	1.000	pfam_Band_7,smart_Band_7,prints_Stomatin	pfam_Band_7,smart_Band_7,prints_Stomatin	-	no_errors	NPHS2	HGNC	ENSG00000116218	tier1	rs74315347	-	38	0	0.00	31	18	36.73
NR2C2	0	genome.wustl.edu	37	3	15064742	15064742	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	3	15064742	15064742	C	T	SNP	NR2C2	ENST00000323373	human	ensembl	74_37	+1	known	missense	c.649	p.R217W	0.995	superfamily_Nucl_hormone_rcpt_ligand-bd	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt	-	no_errors	NR2C2	HGNC	ENSG00000177463	tier1	-	-	49	0	0.00	29	6	17.14
NRG1	0	genome.wustl.edu	37	8	32453467	32453467	+	Silent	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	8	32453467	32453467	G	T	SNP	NRG1	ENST00000338921	human	ensembl	74_37	+1	known	silent	c.222	p.G74	0.996	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Neuregulin_1_C,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Ig-like_dom,prints_Neuregulin	-	no_errors	NRG1	HGNC	ENSG00000157168				23	0	0.00	35	4	10.26
NRK	0	genome.wustl.edu	37	X	105156740	105156740	+	Missense_Mutation	SNP	A	A	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	X	105156740	105156740	A	C	SNP	NRK	ENST00000428173	human	ensembl	74_37	+1	known	missense	c.2345	p.K782T	0.001	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Citron,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_dom	-	no_errors	NRK	HGNC	ENSG00000123572	tier1	-	-	31	0	0.00	28	22	44.00
NRXN1	0	genome.wustl.edu	37	2	50850700	50850700	+	Silent	SNP	A	A	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	2	50850700	50850700	A	G	SNP	NRXN1	ENST00000402717	human	ensembl	74_37	-1	known	silent	c.886	p.L296	1.000	superfamily_ConA-like_lec_gl_sf,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN1	HGNC	ENSG00000179915	tier1	-	-	36	0	0.00	42	20	32.26
NYAP2	0	genome.wustl.edu	37	2	226446657	226446657	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	2	226446657	226446657	C	A	SNP	NYAP2	ENST00000272907	human	ensembl	74_37	+1	known	missense	c.524	p.A175E	0.494	NULL	NULL	-	no_errors	NYAP2	HGNC	ENSG00000144460				32	0	0.00	34	2	5.56
OGFRL1	0	genome.wustl.edu	37	6	72011416	72011416	+	Silent	SNP	T	T	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	6	72011416	72011416	T	C	SNP	OGFRL1	ENST00000370435	human	ensembl	74_37	+1	known	silent	c.1020	p.T340	0.027	NULL	pfam_OGF_rcpt	-	no_errors	OGFRL1	HGNC	ENSG00000119900	tier1	-	-	10	0	0.00	11	6	35.29
OPLAH	0	genome.wustl.edu	37	8	145110038	145110038	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	8	145110038	145110038	C	T	SNP	OPLAH	ENST00000426825	human	ensembl	74_37	-1	known	missense	c.2303	p.R768H	0.999	pfam_Hydantoinase_B	pfam_Hydantoinase_B,pfam_Hydantoinase_A,pfam_Hydant_A_N	-	no_errors	OPLAH	HGNC	ENSG00000178814	tier1	-	-	35	0	0.00	72	4	5.26
OR10G4	0	genome.wustl.edu	37	11	123886648	123886648	+	Silent	SNP	T	T	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	11	123886648	123886648	T	C	SNP	OR10G4	ENST00000320891	human	ensembl	74_37	+1	known	silent	c.367	p.L123	0.994	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10G4	HGNC	ENSG00000254737	tier1	-	-	84	0	0.00	50	25	33.33
OR2M3	0	genome.wustl.edu	37	1	248366816	248366816	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	1	248366816	248366816	G	T	SNP	OR2M3	ENST00000456743	human	ensembl	74_37	+1	known	missense	c.447	p.W149C	0.092	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2M3	HGNC	ENSG00000228198	tier1	-	-	91	0	0.00	84	33	28.21
OR2T10	0	genome.wustl.edu	37	1	248756469	248756469	+	Silent	SNP	A	A	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	1	248756469	248756469	A	G	SNP	OR2T10	ENST00000330500	human	ensembl	74_37	-1	known	silent	c.601	p.L201	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T10	HGNC	ENSG00000184022	tier1	-	-	68	0	0.00	53	31	36.90
OR2T10	0	genome.wustl.edu	37	1	248756934	248756934	+	Missense_Mutation	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	1	248756934	248756934	T	G	SNP	OR2T10	ENST00000330500	human	ensembl	74_37	-1	known	missense	c.136	p.I46L	0.009	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T10	HGNC	ENSG00000184022	tier1	-	-	26	0	0.00	12	9	42.86
OR2W3	0	genome.wustl.edu	37	1	248059417	248059417	+	Missense_Mutation	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	1	248059417	248059417	T	G	SNP	OR2W3	ENST00000360358	human	ensembl	74_37	+1	known	missense	c.529	p.F177V	0.999	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2W3	HGNC	ENSG00000238243	tier1	-	-	66	0	0.00	44	20	31.25
OR4C11	0	genome.wustl.edu	37	11	55371556	55371556	+	Silent	SNP	T	T	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	11	55371556	55371556	T	C	SNP	OR4C11	ENST00000302231	human	ensembl	74_37	-1	known	silent	c.294	p.Q98	0.966	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C11	HGNC	ENSG00000172188	tier1	-	-	32	0	0.00	40	6	13.04
OR4C46	0	genome.wustl.edu	37	11	51515371	51515371	+	Silent	SNP	T	T	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	11	51515371	51515371	T	C	SNP	OR4C46	ENST00000328188	human	ensembl	74_37	+1	known	silent	c.90	p.F30	0.000	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C46	HGNC	ENSG00000185926	tier1	-	-	61	0	0.00	55	15	21.43
OR52H1	0	genome.wustl.edu	37	11	5565851	5565851	+	Silent	SNP	T	T	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	11	5565851	5565851	T	C	SNP	OR52H1	ENST00000322653	human	ensembl	74_37	-1	known	silent	c.903	p.G301	0.990	prints_Olfact_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52H1	HGNC	ENSG00000181616	tier1	-	-	52	0	0.00	72	14	16.28
OR5D14	0	genome.wustl.edu	37	11	55563202	55563202	+	Silent	SNP	T	T	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	11	55563202	55563202	T	C	SNP	OR5D14	ENST00000335605	human	ensembl	74_37	+1	known	silent	c.171	p.F57	0.316	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5D14	HGNC	ENSG00000186113	tier1	-	-	89	0	0.00	132	27	16.98
OR5D14	0	genome.wustl.edu	37	11	55563513	55563513	+	Missense_Mutation	SNP	T	T	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	11	55563513	55563513	T	A	SNP	OR5D14	ENST00000335605	human	ensembl	74_37	+1	known	missense	c.482	p.L161H	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5D14	HGNC	ENSG00000186113	tier1	-	-	113	0	0.00	150	14	8.54
OR5K4	0	genome.wustl.edu	37	3	98073592	98073592	+	Frame_Shift_Del	DEL	A	A	-			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	3	98073592	98073592	A	-	DEL	OR5K4	ENST00000354924	human	ensembl	74_37	+1	known	frame_shift_del	c.895	p.I301fs	0.997	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5K4	HGNC	ENSG00000196098	tier1			32	0	0.00	56	6	9.68
OR6F1	0	genome.wustl.edu	37	1	247876024	247876024	+	Missense_Mutation	SNP	A	A	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	1	247876024	247876024	A	C	SNP	OR6F1	ENST00000302084	human	ensembl	74_37	-1	known	missense	c.34	p.F12V	0.031	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6F1	HGNC	ENSG00000169214	tier1	-	-	35	0	0.00	5	25	83.33
OR6K2	0	genome.wustl.edu	37	1	158670013	158670013	+	Missense_Mutation	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	1	158670013	158670013	T	G	SNP	OR6K2	ENST00000359610	human	ensembl	74_37	-1	known	missense	c.430	p.T144P	0.908	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6K2	HGNC	ENSG00000196171	tier1	-	-	9	0	0.00	25	5	16.67
OR8K1	0	genome.wustl.edu	37	11	56114008	56114008	+	Missense_Mutation	SNP	T	T	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	11	56114008	56114008	T	C	SNP	OR8K1	ENST00000279783	human	ensembl	74_37	+1	known	missense	c.494	p.L165P	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8K1	HGNC	ENSG00000150261	tier1	-	-	62	0	0.00	53	19	26.39
ORAI3	0	genome.wustl.edu	37	16	30964968	30964968	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	16	30964968	30964968	G	T	SNP	ORAI3	ENST00000318663	human	ensembl	74_37	+1	known	missense	c.691	p.A231S	0.000	pfam_CRAC_channel	pfam_CRAC_channel	-	no_errors	ORAI3	HGNC	ENSG00000175938				62	0	0.00	50	3	5.66
OSGIN2	0	genome.wustl.edu	37	8	90937464	90937464	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	8	90937464	90937464	G	T	SNP	OSGIN2	ENST00000451899	human	ensembl	74_37	+1	known	missense	c.1354	p.A452S	1.000	NULL	NULL	-	no_errors	OSGIN2	HGNC	ENSG00000164823	tier1	-	-	27	0	0.00	40	35	46.67
PAX1	0	genome.wustl.edu	37	20	21687512	21687512	+	Silent	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	20	21687512	21687512	G	A	SNP	PAX1	ENST00000398485	human	ensembl	74_37	+1	known	silent	c.723	p.P241	0.585	NULL	pfam_Paired_dom,superfamily_Homeodomain-like,smart_Paired_dom,pfscan_Paired_dom,prints_Paired_dom	-	no_errors	PAX1	HGNC	ENSG00000125813	tier1	-	-	85	0	0.00	77	65	45.77
PCDH17	0	genome.wustl.edu	37	13	58208305	58208305	+	Missense_Mutation	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	13	58208305	58208305	T	G	SNP	PCDH17	ENST00000377918	human	ensembl	74_37	+1	known	missense	c.1625	p.F542C	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH17	HGNC	ENSG00000118946	tier1	-	-	39	0	0.00	25	19	43.18
PCLO	0	genome.wustl.edu	37	7	82583544	82583544	+	Missense_Mutation	SNP	T	T	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	7	82583544	82583544	T	C	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	missense	c.6725	p.E2242G	0.996	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472	tier1	-	-	30	0	0.00	32	4	11.11
PCLO	0	genome.wustl.edu	37	7	82764562	82764562	+	Silent	SNP	A	A	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	7	82764562	82764562	A	G	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	silent	c.2304	p.S768	0.002	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472	tier1	-	-	62	0	0.00	34	23	40.35
PCLO	0	genome.wustl.edu	37	7	82784486	82784486	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	7	82784486	82784486	G	T	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	missense	c.1471	p.P491T	0.000	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472	tier1	-	-	26	0	0.00	18	5	21.74
PDE11A	0	genome.wustl.edu	37	2	178494173	178494173	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	2	178494173	178494173	G	A	SNP	PDE11A	ENST00000286063	human	ensembl	74_37	-1	known	missense	c.2764	p.P922S	0.002	NULL	pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE11A	HGNC	ENSG00000128655				77	0	0.00	104	7	6.31
PHYHIPL	0	genome.wustl.edu	37	10	60994157	60994157	+	Missense_Mutation	SNP	A	A	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	10	60994157	60994157	A	G	SNP	PHYHIPL	ENST00000373880	human	ensembl	74_37	+1	known	missense	c.200	p.K67R	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	PHYHIPL	HGNC	ENSG00000165443	tier1	-	-	31	0	0.00	24	17	41.46
PKP1	0	genome.wustl.edu	37	1	201297884	201297884	+	RNA	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	1	201297884	201297884	T	G	SNP	PKP1	ENST00000477817	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.037	-	-	-	no_errors	PKP1	HGNC	ENSG00000081277	tier1	-	-	74	0	0.00	40	34	45.95
PLCE1	0	genome.wustl.edu	37	10	96058377	96058377	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	10	96058377	96058377	G	A	SNP	PLCE1	ENST00000260766	human	ensembl	74_37	+1	known	missense	c.5409	p.M1803I	0.981	pfam_PLipase_C_Pinositol-sp_Y,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_PLipase_C_Pinositol-sp_Y,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_Ras-assoc,pfam_RasGRF_CDC25,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_Ras_GEF_dom,superfamily_C2_dom,smart_RasGRF_CDC25,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,smart_Ras-assoc,pfscan_C2_dom,pfscan_Ras-assoc,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,pfscan_RasGRF_CDC25,prints_Pinositol_PLipase_C	-	no_errors	PLCE1	HGNC	ENSG00000138193	tier1	-	-	40	0	0.00	36	8	18.18
PLCL1	0	genome.wustl.edu	37	2	198968589	198968589	+	Missense_Mutation	SNP	A	A	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	2	198968589	198968589	A	C	SNP	PLCL1	ENST00000428675	human	ensembl	74_37	+1	known	missense	c.3034	p.K1012Q	1.000	NULL	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_Pleckstrin_homology,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCL1	HGNC	ENSG00000115896	tier1	-	-	45	0	0.00	37	16	30.19
PLCXD3	0	genome.wustl.edu	37	5	41381955	41381955	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	5	41381955	41381955	C	A	SNP	PLCXD3	ENST00000328457	human	ensembl	74_37	-1	known	missense	c.785	p.S262I	1.000	superfamily_PLC-like_Pdiesterase_TIM-brl	pfam_PLipase_C_PInositol-sp_X_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_PInositol-sp_X_dom	-	no_errors	PLCXD3	HGNC	ENSG00000182836	tier1	-	-	127	0	0.00	68	42	38.18
PLEKHM1	0	genome.wustl.edu	37	17	43545713	43545713	+	Silent	SNP	T	T	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	17	43545713	43545713	T	C	SNP	PLEKHM1	ENST00000430334	human	ensembl	74_37	-1	known	silent	c.1170	p.V390	0.000	NULL	pfam_Run,superfamily_Znf_FYVE_PHD,smart_Run,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Pleckstrin_homology,pfscan_Run,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	PLEKHM1	HGNC	ENSG00000225190	tier1	-	-	80	0	0.00	69	24	25.81
PLEKHM3	0	genome.wustl.edu	37	2	208866231	208866231	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	2	208866231	208866231	G	T	SNP	PLEKHM3	ENST00000427836	human	ensembl	74_37	-1	known	missense	c.133	p.L45M	0.993	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHM3	HGNC	ENSG00000178385	tier1	-	-	28	0	0.00	20	26	56.52
PMF1-BGLAP	0	genome.wustl.edu	37	1	156203459	156203459	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	1	156203459	156203459	C	A	SNP	PMF1-BGLAP	ENST00000368276	human	ensembl	74_37	+1	known	missense	c.308	p.A103D	0.927	pfam_Nnf1	pfam_Nnf1	-	no_errors	PMF1-BGLAP	HGNC	ENSG00000260238	tier1	-	-	19	0	0.00	53	9	14.52
POLQ	0	genome.wustl.edu	37	3	121200659	121200659	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	3	121200659	121200659	C	T	SNP	POLQ	ENST00000264233	human	ensembl	74_37	-1	known	missense	c.5971	p.V1991M	1.000	superfamily_RNaseH-like_dom	pfam_DNA-dir_DNA_pol_A_palm_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_RNaseH-like_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_DNA-dir_DNA_pol_A_palm_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,prints_DNA_polymerase_A	-	no_errors	POLQ	HGNC	ENSG00000051341				14	0	0.00	20	4	16.67
POLR3A	0	genome.wustl.edu	37	10	79762008	79762008	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	10	79762008	79762008	C	T	SNP	POLR3A	ENST00000372371	human	ensembl	74_37	-1	known	missense	c.2306	p.R769Q	1.000	pfam_RNA_pol_Rpb1_4	pfam_RNA_pol_Rpb1_1,pfam_RNA_pol_Rpb1_5,pfam_RNA_pol_asu,pfam_RNA_pol_Rpb1_3,pfam_RNA_pol_Rpb1_4,smart_RNA_pol_N	-	no_errors	POLR3A	HGNC	ENSG00000148606	tier1	-	-	38	0	0.00	17	35	67.31
POU6F2	0	genome.wustl.edu	37	7	39379320	39379320	+	Silent	SNP	T	T	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	7	39379320	39379320	T	C	SNP	POU6F2	ENST00000403058	human	ensembl	74_37	+1	known	silent	c.591	p.P197	0.000	NULL	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Lambda_DNA-bd_dom,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU6F2	HGNC	ENSG00000106536				51	0	0.00	35	4	10.26
PPFIA2	0	genome.wustl.edu	37	12	81675120	81675120	+	Missense_Mutation	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	12	81675120	81675120	T	G	SNP	PPFIA2	ENST00000549396	human	ensembl	74_37	-1	known	missense	c.3128	p.E1043A	1.000	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	PPFIA2	HGNC	ENSG00000139220	tier1	-	-	28	0	0.00	15	8	34.78
PREX2	0	genome.wustl.edu	37	8	68972921	68972921	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	8	68972921	68972921	G	C	SNP	PREX2	ENST00000288368	human	ensembl	74_37	+1	known	missense	c.1246	p.V416L	1.000	pfam_DEP_dom,smart_DEP_dom,pfscan_DEP_dom	pfam_DH-domain,pfam_DEP_dom,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,smart_DH-domain,smart_Pleckstrin_homology,smart_DEP_dom,smart_PDZ,pfscan_DEP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PREX2	HGNC	ENSG00000046889	tier1	-	-	38	0	0.00	52	7	11.86
PROS1	0	genome.wustl.edu	37	3	93617396	93617396	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	3	93617396	93617396	C	T	SNP	PROS1	ENST00000394236	human	ensembl	74_37	-1	known	missense	c.745	p.E249K	0.998	smart_EGF-like_Ca-bd_dom,smart_EG-like_dom	pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,pfam_GLA_domain,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_GLA_domain,smart_GLA_domain,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_GLA_domain,pfscan_Laminin_G,prints_GLA_domain	-	no_errors	PROS1	HGNC	ENSG00000184500	tier1	-	-	54	0	0.00	85	9	9.57
PRRC2B	0	genome.wustl.edu	37	9	134358095	134358095	+	Splice_Site	SNP	A	A	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	9	134358095	134358095	A	C	SNP	PRRC2B	ENST00000357304	human	ensembl	74_37	+1	known	splice_site	c.5176-2	e21-2	0.996	-	-	-	no_errors	PRRC2B	HGNC	ENSG00000130723	tier1	-	-	38	0	0.00	23	14	37.84
PSMD1	0	genome.wustl.edu	37	2	232018342	232018342	+	Missense_Mutation	SNP	A	A	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	2	232018342	232018342	A	C	SNP	PSMD1	ENST00000308696	human	ensembl	74_37	+1	known	missense	c.2180	p.K727T	1.000	superfamily_ARM-type_fold,pirsf_26S_Psome_Rpn2	pfam_Proteasome/cyclosome_rpt,superfamily_ARM-type_fold,pirsf_26S_Psome_Rpn2	-	no_errors	PSMD1	HGNC	ENSG00000173692	tier1	-	-	40	0	0.00	44	11	20.00
PTK2	0	genome.wustl.edu	37	8	141754888	141754888	+	RNA	DEL	G	G	-			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	8	141754888	141754888	G	-	DEL	PTK2	ENST00000518509	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PTK2	HGNC	ENSG00000169398	tier1			10	0	0.00	24	5	17.24
PTPN14	0	genome.wustl.edu	37	1	214557671	214557671	+	Missense_Mutation	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	1	214557671	214557671	T	G	SNP	PTPN14	ENST00000366956	human	ensembl	74_37	-1	known	missense	c.1527	p.K509N	0.000	pirsf_Tyr_Pase_non-rcpt_typ-14/21	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_FERM_central,pfam_FERM_N,pfam_FERM_PH-like_C,pfam_Dual-sp_phosphatase_cat-dom,superfamily_FERM_central,smart_Band_41_domain,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-14/21,pfscan_FERM_domain,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam	-	no_errors	PTPN14	HGNC	ENSG00000152104	tier1	-	-	61	0	0.00	31	30	49.18
PTPRC	0	genome.wustl.edu	37	1	198725126	198725126	+	Missense_Mutation	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	1	198725126	198725126	T	G	SNP	PTPRC	ENST00000442510	human	ensembl	74_37	+1	known	missense	c.3737	p.I1246S	0.545	pirsf_Leukocyte_common_ag	pirsf_Leukocyte_common_ag,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Leukocyte_common_ag,pfam_PTP_recept_N,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRC	HGNC	ENSG00000081237	tier1	-	-	14	0	0.00	16	8	33.33
PTPRM	0	genome.wustl.edu	37	18	8253277	8253277	+	Silent	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	18	8253277	8253277	T	G	SNP	PTPRM	ENST00000400060	human	ensembl	74_37	+1	known	silent	c.2622	p.T874	0.261	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Ig_sub,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRM	HGNC	ENSG00000173482	tier1	-	-	18	0	0.00	10	13	56.52
PTPRQ	0	genome.wustl.edu	37	12	80927813	80927813	+	Missense_Mutation	SNP	A	A	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	12	80927813	80927813	A	C	SNP	PTPRQ	ENST00000266688	human	ensembl	74_37	+1	known	missense	c.2686	p.T896P	0.904	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRQ	HGNC	ENSG00000139304	tier1	-	-	17	0	0.00	23	5	17.86
QRICH2	0	genome.wustl.edu	37	17	74274083	74274083	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	17	74274083	74274083	G	A	SNP	QRICH2	ENST00000262765	human	ensembl	74_37	-1	known	missense	c.4606	p.P1536S	0.157	NULL	NULL	-	no_errors	QRICH2	HGNC	ENSG00000129646	tier1	-	-	30	0	0.00	10	8	44.44
RANBP3L	0	genome.wustl.edu	37	5	36271359	36271359	+	Missense_Mutation	SNP	A	A	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	5	36271359	36271359	A	C	SNP	RANBP3L	ENST00000296604	human	ensembl	74_37	-1	known	missense	c.146	p.F49C	0.998	NULL	pfam_Ran_bind_dom,smart_Ran_bind_dom,pfscan_Ran_bind_dom	-	no_errors	RANBP3L	HGNC	ENSG00000164188	tier1	-	-	39	0	0.00	28	14	33.33
RBBP6	0	genome.wustl.edu	37	16	24583718	24583718	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	16	24583718	24583718	G	T	SNP	RBBP6	ENST00000319715	human	ensembl	74_37	+1	known	missense	c.5331	p.E1777D	0.883	NULL	pfam_DWNN_domain,pfam_Ubox_domain,pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_Znf_CCHC,smart_Znf_RING,pfscan_Znf_RING,pfscan_Znf_CCHC	-	no_errors	RBBP6	HGNC	ENSG00000122257				11	0	0.00	10	6	37.50
RBM4	0	genome.wustl.edu	37	11	66411053	66411053	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	11	66411053	66411053	G	T	SNP	RBM4	ENST00000310092	human	ensembl	74_37	+1	known	missense	c.545	p.R182L	1.000	NULL	pfam_RRM_dom,pfam_Znf_CCHC,smart_RRM_dom,smart_Znf_CCHC,pfscan_Znf_CCHC,pfscan_RRM_dom	-	no_errors	RBM4	HGNC	ENSG00000173933				40	0	0.00	46	3	6.12
RBM45	0	genome.wustl.edu	37	2	178990805	178990805	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	2	178990805	178990805	G	T	SNP	RBM45	ENST00000286070	human	ensembl	74_37	+1	known	missense	c.1327	p.A443S	0.810	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM45	HGNC	ENSG00000155636	tier1	-	-	40	0	0.00	66	4	5.71
RFFL	0	genome.wustl.edu	37	17	33339111	33339111	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	17	33339111	33339111	G	A	SNP	RFFL	ENST00000315249	human	ensembl	74_37	-1	known	missense	c.968	p.P323L	1.000	smart_Znf_RING,pfscan_Znf_RING	superfamily_Znf_FYVE_PHD,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RFFL	HGNC	ENSG00000092871				39	0	0.00	33	4	10.81
RGMA	0	genome.wustl.edu	37	15	93588423	93588423	+	Silent	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	15	93588423	93588423	G	A	SNP	RGMA	ENST00000329082	human	ensembl	74_37	-1	known	silent	c.1158	p.G386	0.006	pfam_RGM_C	pfam_RGM_N,pfam_RGM_C	-	no_errors	RGMA	HGNC	ENSG00000182175	tier1	-	-	71	0	0.00	13	28	68.29
RIMBP3	0	genome.wustl.edu	37	22	20457383	20457383	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	22	20457383	20457383	G	T	SNP	RIMBP3	ENST00000426804	human	ensembl	74_37	-1	known	missense	c.3919	p.P1307T	0.003	NULL	pfam_SH3_2,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	RIMBP3	HGNC	ENSG00000196622	tier1	rs199673858	-	35	0	0.00	8	3	27.27
RIMS2	0	genome.wustl.edu	37	8	104898169	104898169	+	Silent	SNP	T	T	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	8	104898169	104898169	T	C	SNP	RIMS2	ENST00000406091	human	ensembl	74_37	+1	known	silent	c.1342	p.L448	0.117	NULL	pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,superfamily_PDZ,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel	-	no_errors	RIMS2	HGNC	ENSG00000176406	tier1	-	-	27	0	0.00	81	5	5.75
RIMS2	0	genome.wustl.edu	37	8	105261742	105261742	+	Missense_Mutation	SNP	A	A	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	8	105261742	105261742	A	C	SNP	RIMS2	ENST00000406091	human	ensembl	74_37	+1	known	missense	c.3617	p.K1206T	1.000	superfamily_C2_dom	pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,superfamily_PDZ,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel	-	no_errors	RIMS2	HGNC	ENSG00000176406	tier1	-	-	38	0	0.00	78	35	30.97
RIN1	0	genome.wustl.edu	37	11	66101564	66101564	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	11	66101564	66101564	G	A	SNP	RIN1	ENST00000311320	human	ensembl	74_37	-1	known	missense	c.1417	p.R473W	1.000	pfscan_VPS9	pfam_VPS9,pfam_Ras-assoc,smart_SH2,smart_VPS9_subgr,smart_Ras-assoc,pfscan_Ras-assoc,pfscan_SH2,pfscan_VPS9	-	no_errors	RIN1	HGNC	ENSG00000174791	tier1	-	-	19	0	0.00	24	11	31.43
ROBO2	0	genome.wustl.edu	37	3	77147238	77147238	+	Silent	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	3	77147238	77147238	C	T	SNP	ROBO2	ENST00000461745	human	ensembl	74_37	+1	known	silent	c.135	p.G45	0.980	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	ROBO2	HGNC	ENSG00000185008				13	0	0.00	8	6	42.86
RPS6KA1	0	genome.wustl.edu	37	1	26899743	26899743	+	Missense_Mutation	SNP	A	A	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	1	26899743	26899743	A	T	SNP	RPS6KA1	ENST00000531382	human	ensembl	74_37	+1	known	missense	c.2003	p.D668V	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ribosomal_S6_kinase_II,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Ribosomal_S6_kinase_II,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	RPS6KA1	HGNC	ENSG00000117676	tier1	-	-	29	0	0.00	9	4	30.77
RXRG	0	genome.wustl.edu	37	1	165386426	165386426	+	Silent	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	1	165386426	165386426	G	A	SNP	RXRG	ENST00000359842	human	ensembl	74_37	-1	known	silent	c.474	p.G158	0.992	pfam_Znf_hrmn_rcpt,smart_Znf_hrmn_rcpt,pfscan_Znf_hrmn_rcpt,prints_Znf_hrmn_rcpt	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Nuc_recep-AF1,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Retinoid-X_rcpt/HNF4,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_COUP_TF	-	no_errors	RXRG	HGNC	ENSG00000143171	tier1	-	-	86	0	0.00	108	45	29.41
RYR2	0	genome.wustl.edu	37	1	237948142	237948142	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	1	237948142	237948142	C	T	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	missense	c.13148	p.S4383L	0.984	pfam_Ryanrecept_TM4-6	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626	tier1	-	-	21	0	0.00	18	9	33.33
SARS	0	genome.wustl.edu	37	1	109766611	109766611	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	1	109766611	109766611	G	T	SNP	SARS	ENST00000369923	human	ensembl	74_37	+1	known	missense	c.148	p.A50S	1.000	pfam_Ser-tRNA-synth_1_N,superfamily_tRNA-bd_arm,pirsf_Ser-tRNA-ligase_type_1,tigrfam_Ser-tRNA-ligase_type_1	pfam_aa-tRNA-synt_IIb_cons-dom,pfam_Ser-tRNA-synth_1_N,superfamily_tRNA-bd_arm,pirsf_Ser-tRNA-ligase_type_1,pfscan_aa-tRNA-synth_II,prints_Ser-tRNA-ligase_type_1,tigrfam_Ser-tRNA-ligase_type_1	-	no_errors	SARS	HGNC	ENSG00000031698	tier1	-	-	46	0	0.00	50	4	7.41
SCARF1	0	genome.wustl.edu	37	17	1548969	1548969	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	17	1548969	1548969	G	A	SNP	SCARF1	ENST00000263071	human	ensembl	74_37	-1	known	missense	c.23	p.P8L	0.028	NULL	pfam_EGF_laminin,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,pfscan_EG-like_dom	-	no_errors	SCARF1	HGNC	ENSG00000074660	tier1	rs200018599	-	22	0	0.00	1	23	95.83
SCN1A	0	genome.wustl.edu	37	2	166848866	166848866	+	Missense_Mutation	SNP	A	A	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	2	166848866	166848866	A	G	SNP	SCN1A	ENST00000303395	human	ensembl	74_37	-1	known	missense	c.4919	p.L1640P	0.998	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_a1su,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN1A	HGNC	ENSG00000144285	tier1	-	-	74	0	0.00	95	25	20.83
SCN1A	0	genome.wustl.edu	37	2	166897743	166897743	+	Missense_Mutation	SNP	A	A	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	2	166897743	166897743	A	C	SNP	SCN1A	ENST00000303395	human	ensembl	74_37	-1	known	missense	c.2413	p.L805V	0.992	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_a1su,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN1A	HGNC	ENSG00000144285	tier1	-	-	37	0	0.00	34	12	26.09
SCN7A	0	genome.wustl.edu	37	2	167334095	167334095	+	Missense_Mutation	SNP	A	A	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	2	167334095	167334095	A	C	SNP	SCN7A	ENST00000409855	human	ensembl	74_37	-1	known	missense	c.112	p.L38V	0.994	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu	-	no_errors	SCN7A	HGNC	ENSG00000136546	tier1	-	-	42	0	0.00	46	12	20.34
SCN9A	0	genome.wustl.edu	37	2	167134735	167134735	+	Missense_Mutation	SNP	A	A	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	2	167134735	167134735	A	C	SNP	SCN9A	ENST00000303354	human	ensembl	74_37	-1	known	missense	c.2435	p.F812C	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,smart_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN9A	HGNC	ENSG00000169432	tier1	-	-	34	0	0.00	22	29	56.86
SEC24B	0	genome.wustl.edu	37	4	110433175	110433175	+	Frame_Shift_Del	DEL	C	C	-			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	4	110433175	110433175	C	-	DEL	SEC24B	ENST00000265175	human	ensembl	74_37	+1	known	frame_shift_del	c.1839	p.F615fs	1.000	pfam_Znf_Sec23_Sec24,superfamily_Znf_Sec23_Sec24	pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Znf_Sec23_Sec24,pfam_Gelsolin_dom,superfamily_Sec23/24_helical_dom,superfamily_Znf_Sec23_Sec24	-	no_errors	SEC24B	HGNC	ENSG00000138802	tier1			98	0	0.00	75	47	38.52
SETDB2	0	genome.wustl.edu	37	13	50050931	50050931	+	Missense_Mutation	SNP	A	A	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	13	50050931	50050931	A	G	SNP	SETDB2	ENST00000317257	human	ensembl	74_37	+1	known	missense	c.661	p.N221D	0.997	pfam_Methyl_CpG_DNA-bd,superfamily_DNA-bd_dom,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd	pfam_SET_dom,pfam_Pre-SET_dom,pfam_Methyl_CpG_DNA-bd,superfamily_DNA-bd_dom,smart_Methyl_CpG_DNA-bd,smart_Pre-SET_Zn-bd_sub,smart_SET_dom,pfscan_Methyl_CpG_DNA-bd,pfscan_SET_dom,pfscan_Pre-SET_dom	-	no_errors	SETDB2	HGNC	ENSG00000136169	tier1	-	-	40	0	0.00	49	4	7.55
SHANK2	0	genome.wustl.edu	37	11	70331764	70331764	+	Frame_Shift_Del	DEL	G	G	-			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	11	70331764	70331764	G	-	DEL	SHANK2	ENST00000338508	human	ensembl	74_37	-1	known	frame_shift_del	c.4637	p.P1546fs	0.976	NULL	pfam_SAM_type1,pfam_SAM_2,pfam_SH3_2,pfam_PDZ,pfam_SH3_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SAM/pointed,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK2	HGNC	ENSG00000162105	tier1			29	0	0.00	36	2	5.26
SHROOM2	0	genome.wustl.edu	37	X	9900467	9900467	+	Silent	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	X	9900467	9900467	G	T	SNP	SHROOM2	ENST00000380913	human	ensembl	74_37	+1	known	silent	c.3144	p.S1048	0.000	NULL	pfam_ASD2,pfam_ASD1,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SHROOM2	HGNC	ENSG00000146950				23	0	0.00	27	7	20.59
SIM1	0	genome.wustl.edu	37	6	100841712	100841712	+	Silent	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	6	100841712	100841712	G	A	SNP	SIM1	ENST00000262901	human	ensembl	74_37	-1	known	silent	c.1221	p.G407	0.018	pfam_SIM_C	pfam_SIM_C,pfam_PAS_fold_3,pfam_PAS_fold,pfam_bHLH_dom,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,smart_PAC,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	SIM1	HGNC	ENSG00000112246				31	0	0.00	29	6	17.14
SLC12A4	0	genome.wustl.edu	37	16	67984933	67984933	+	Missense_Mutation	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	16	67984933	67984933	T	G	SNP	SLC12A4	ENST00000422611	human	ensembl	74_37	-1	known	missense	c.1334	p.D445A	1.000	pfam_AA-permease/SLC12A_dom,tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,pfam_K/Cl_cotranspt_1/3,prints_KCL_cotranspt,prints_K/Cl_cotranspt1,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A4	HGNC	ENSG00000124067	tier1	-	-	30	0	0.00	28	11	28.21
SLC38A10	0	genome.wustl.edu	37	17	79256060	79256060	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	17	79256060	79256060	G	A	SNP	SLC38A10	ENST00000374759	human	ensembl	74_37	-1	known	missense	c.430	p.R144W	1.000	pfam_AA_transpt_TM	pfam_AA_transpt_TM	-	no_errors	SLC38A10	HGNC	ENSG00000157637	tier1	-	-	62	0	0.00	48	11	18.64
SLC5A10	0	genome.wustl.edu	37	17	18922878	18922878	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	17	18922878	18922878	G	A	SNP	SLC5A10	ENST00000395647	human	ensembl	74_37	+1	known	missense	c.1432	p.V478I	0.975	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A10	HGNC	ENSG00000154025	tier1	-	-	24	0	0.00	14	35	71.43
SLC5A4	0	genome.wustl.edu	37	22	32621756	32621756	+	Missense_Mutation	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	22	32621756	32621756	T	G	SNP	SLC5A4	ENST00000266086	human	ensembl	74_37	-1	known	missense	c.1335	p.Q445H	0.113	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A4	HGNC	ENSG00000100191	tier1	-	-	60	0	0.00	35	26	42.62
SLC6A16	0	genome.wustl.edu	37	19	49793843	49793843	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	19	49793843	49793843	G	T	SNP	SLC6A16	ENST00000454748	human	ensembl	74_37	-1	putative	missense	c.1960	p.P654T	0.000	pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport	-	no_errors	SLC6A16	HGNC	ENSG00000063127	tier1	-	-	33	0	0.00	28	18	39.13
SLC8A1	0	genome.wustl.edu	37	2	40656664	40656664	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	2	40656664	40656664	C	A	SNP	SLC8A1	ENST00000332839	human	ensembl	74_37	-1	known	missense	c.757	p.D253Y	1.000	tigrfam_Na_Ca_Ex	pfam_NaCa_Exmemb,pfam_Calx_beta,smart_Calx_beta,pfscan_DnaJ_domain,prints_Na_Ca_Ex,prints_NaCa_exhngr1,tigrfam_Na_Ca_Ex	-	no_errors	SLC8A1	HGNC	ENSG00000183023				12	0	0.00	31	3	8.82
SLCO1B3	0	genome.wustl.edu	37	12	21243002	21243002	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	12	21243002	21243002	G	A	SNP	SLCO1B3	ENST00000553473	human	ensembl	74_37	+1	known	missense	c.2209	p.D737N	0.002	NULL	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO1B3	HGNC	ENSG00000111700	tier1	-	-	40	0	0.00	15	11	42.31
SLCO1B7	0	genome.wustl.edu	37	12	21207483	21207483	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	12	21207483	21207483	G	T	SNP	SLCO1B7	ENST00000554957	human	ensembl	74_37	+1	known	missense	c.1595	p.R532M	0.000	pfam_OA_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO1B7	HGNC	ENSG00000205754	tier1	-	-	79	0	0.00	34	24	41.38
SLITRK5	0	genome.wustl.edu	37	13	88328683	88328683	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	13	88328683	88328683	G	A	SNP	SLITRK5	ENST00000325089	human	ensembl	74_37	+1	known	missense	c.1040	p.R347Q	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK5	HGNC	ENSG00000165300	tier1	-	-	18	0	0.00	14	7	33.33
SLK	0	genome.wustl.edu	37	10	105727547	105727549	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	10	105727547	105727549	AGA	-	DEL	SLK	ENST00000369755	human	ensembl	74_37	+1	known	in_frame_del	c.44_46	p.K19in_frame_del	1.000:0.998:1.000	superfamily_Kinase-like_dom	pfam_PKK,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_UVR_dom,pfscan_Prot_kinase_dom	-	no_errors	SLK	HGNC	ENSG00000065613	tier1			41	0	0.00	42	6	12.50
SNCAIP	0	genome.wustl.edu	37	5	121761185	121761185	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	5	121761185	121761185	C	T	SNP	SNCAIP	ENST00000379533	human	ensembl	74_37	+1	known	missense	c.1282	p.R428C	0.999	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	SNCAIP	HGNC	ENSG00000064692	tier1	-	-	21	0	0.00	7	5	41.67
SNED1	0	genome.wustl.edu	37	2	242004959	242004959	+	Silent	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	2	242004959	242004959	C	T	SNP	SNED1	ENST00000310397	human	ensembl	74_37	+1	known	silent	c.2958	p.N986	0.084	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_EG-like_dom,pfam_Fibronectin_type3,pfam_Nidogen_extracell_dom,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,superfamily_Fibronectin_type3,superfamily_Sushi_SCR_CCP,smart_Nidogen_extracell_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Sushi_SCR_CCP,smart_Fibronectin_type3,pfscan_EG-like_dom,pfscan_Fibronectin_type3,pfscan_Sushi_SCR_CCP	-	no_errors	SNED1	HGNC	ENSG00000162804				60	0	0.00	72	4	5.26
SNHG7	0	genome.wustl.edu	37	9	139616243	139616244	+	RNA	DEL	TG	TG	-			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	9	139616243	139616244	TG	-	DEL	SNHG7	ENST00000414282	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.024:0.099	-	-	-	no_errors	SNHG7	HGNC	ENSG00000233016	tier1			39	0	0.00	17	29	63.04
SNX10	0	genome.wustl.edu	37	7	26400643	26400643	+	Missense_Mutation	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	7	26400643	26400643	T	G	SNP	SNX10	ENST00000446848	human	ensembl	74_37	+1	known	missense	c.151	p.F51V	1.000	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	-	no_errors	SNX10	HGNC	ENSG00000086300	tier1	-	-	57	0	0.00	34	10	22.22
SPAG16	0	genome.wustl.edu	37	2	215013957	215013957	+	Missense_Mutation	SNP	A	A	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	2	215013957	215013957	A	C	SNP	SPAG16	ENST00000331683	human	ensembl	74_37	+1	known	missense	c.1687	p.S563R	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	SPAG16	HGNC	ENSG00000144451	tier1	-	-	70	0	0.00	84	31	26.96
SPANXN1	0	genome.wustl.edu	37	X	144337250	144337250	+	Silent	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	X	144337250	144337250	G	A	SNP	SPANXN1	ENST00000370493	human	ensembl	74_37	+1	known	silent	c.135	p.T45	0.000	pfam_SPANX_prot	pfam_SPANX_prot	-	no_errors	SPANXN1	HGNC	ENSG00000203923	tier1	-	-	56	0	0.00	37	69	65.09
SPATA13	0	genome.wustl.edu	37	13	24863303	24863303	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	13	24863303	24863303	G	T	SNP	SPATA13	ENST00000382108	human	ensembl	74_37	+1	known	missense	c.2834	p.C945F	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_SH3_domain,pfam_SH3_2,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_SH3_domain,smart_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	SPATA13	HGNC	ENSG00000182957	tier1	-	-	42	0	0.00	34	4	10.53
SPATA31A6	0	genome.wustl.edu	37	9	43625621	43625621	+	Missense_Mutation	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	9	43625621	43625621	T	G	SNP	SPATA31A6	ENST00000332857	human	ensembl	74_37	-1	known	missense	c.3066	p.Q1022H	0.033	NULL	NULL	-	no_errors	SPATA31A6	HGNC	ENSG00000185775	tier1	-	-	46	0	0.00	55	14	20.00
SPG20	0	genome.wustl.edu	37	13	36909527	36909527	+	Silent	SNP	A	A	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	13	36909527	36909527	A	G	SNP	SPG20	ENST00000355182	human	ensembl	74_37	-1	known	silent	c.441	p.T147	0.000	NULL	pfam_Senescence/spartin,pfam_MIT,smart_MIT	-	no_errors	SPG20	HGNC	ENSG00000133104	tier1	-	-	34	0	0.00	32	12	27.27
SPTLC3	0	genome.wustl.edu	37	20	13055028	13055028	+	Missense_Mutation	SNP	A	A	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	20	13055028	13055028	A	C	SNP	SPTLC3	ENST00000399002	human	ensembl	74_37	+1	known	missense	c.490	p.N164H	1.000	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase	pfam_Aminotransferase_I/II,pfam_ArAA_b-elim_lyase/Thr_aldolase,superfamily_PyrdxlP-dep_Trfase	-	no_errors	SPTLC3	HGNC	ENSG00000172296	tier1	-	-	116	0	0.00	211	24	10.21
SPTLC3	0	genome.wustl.edu	37	20	13098334	13098334	+	Missense_Mutation	SNP	A	A	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	20	13098334	13098334	A	G	SNP	SPTLC3	ENST00000399002	human	ensembl	74_37	+1	known	missense	c.1114	p.S372G	1.000	pfam_Aminotransferase_I/II,pfam_ArAA_b-elim_lyase/Thr_aldolase,superfamily_PyrdxlP-dep_Trfase	pfam_Aminotransferase_I/II,pfam_ArAA_b-elim_lyase/Thr_aldolase,superfamily_PyrdxlP-dep_Trfase	-	no_errors	SPTLC3	HGNC	ENSG00000172296	tier1	-	-	30	0	0.00	41	12	22.64
SRRM2	0	genome.wustl.edu	37	16	2815963	2815963	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	16	2815963	2815963	C	T	SNP	SRRM2	ENST00000301740	human	ensembl	74_37	+1	known	missense	c.5434	p.R1812W	0.991	NULL	pfam_mRNA_splic_Cwf21	-	no_errors	SRRM2	HGNC	ENSG00000167978	tier1	-	-	37	0	0.00	46	4	8.00
ST8SIA4	0	genome.wustl.edu	37	5	100191934	100191934	+	Frame_Shift_Del	DEL	A	A	-			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	5	100191934	100191934	A	-	DEL	ST8SIA4	ENST00000231461	human	ensembl	74_37	-1	known	frame_shift_del	c.670	p.W224fs	1.000	pfam_Glyco_trans_29,pirsf_Sialyl_trans	pfam_Glyco_trans_29,pirsf_Sialyl_trans	-	no_errors	ST8SIA4	HGNC	ENSG00000113532	tier1			58	0	0.00	34	17	33.33
STON2	0	genome.wustl.edu	37	14	81743371	81743371	+	Missense_Mutation	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	14	81743371	81743371	T	G	SNP	STON2	ENST00000267540	human	ensembl	74_37	-1	known	missense	c.2284	p.S762R	1.000	pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C,pirsf_Stonin,pfscan_Clathrin_mu_C	pfam_Stonin2_N,pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C,pirsf_Stonin,pfscan_Clathrin_mu_C,pfscan_SHD	-	no_errors	STON2	HGNC	ENSG00000140022	tier1	-	-	58	0	0.00	36	14	28.00
STPG1	0	genome.wustl.edu	37	1	24687446	24687446	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	1	24687446	24687446	C	T	SNP	STPG1	ENST00000337248	human	ensembl	74_37	-1	known	missense	c.823	p.V275M	0.999	NULL	NULL	-	no_errors	STPG1	HGNC	ENSG00000001460	tier1	-	-	39	0	0.00	28	11	28.21
SYN2	0	genome.wustl.edu	37	3	12224813	12224813	+	RNA	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	3	12224813	12224813	G	T	SNP	SYN2	ENST00000425297	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SYN2	HGNC	ENSG00000157152	tier1	-	-	61	0	0.00	68	4	5.56
SYNE1	0	genome.wustl.edu	37	6	152552615	152552615	+	Missense_Mutation	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	6	152552615	152552615	T	G	SNP	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	missense	c.20950	p.S6984R	1.000	superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018	tier1	-	-	49	0	0.00	57	53	48.18
TAS2R16	0	genome.wustl.edu	37	7	122635132	122635132	+	Missense_Mutation	SNP	A	A	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	7	122635132	122635132	A	C	SNP	TAS2R16	ENST00000249284	human	ensembl	74_37	-1	known	missense	c.557	p.V186G	0.000	pfam_TAS2_rcpt	pfam_TAS2_rcpt	-	no_errors	TAS2R16	HGNC	ENSG00000128519	tier1	-	-	48	0	0.00	42	17	28.81
TBC1D19	0	genome.wustl.edu	37	4	26673809	26673809	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	4	26673809	26673809	G	T	SNP	TBC1D19	ENST00000264866	human	ensembl	74_37	+1	known	missense	c.703	p.V235F	1.000	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D19	HGNC	ENSG00000109680	tier1	-	-	50	0	0.00	29	12	29.27
TECTA	0	genome.wustl.edu	37	11	120998499	120998499	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	11	120998499	120998499	G	A	SNP	TECTA	ENST00000264037	human	ensembl	74_37	+1	known	missense	c.1813	p.V605M	1.000	pfam_TIL_dom,superfamily_TIL_dom	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_ZP_dom,pfam_Nidogen_extracell_dom,pfam_TIL_dom,superfamily_TIL_dom,smart_Nidogen_extracell_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,smart_ZP_dom,pfscan_ZP_dom	-	no_errors	TECTA	HGNC	ENSG00000109927	tier1	-	-	69	0	0.00	61	7	10.29
TENM1	0	genome.wustl.edu	37	X	123519781	123519781	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	X	123519781	123519781	C	T	SNP	TENM1	ENST00000422452	human	ensembl	74_37	-1	known	missense	c.5822	p.R1941Q	1.000	NULL	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD	-	no_errors	TENM1	HGNC	ENSG00000009694	tier1	-	-	34	0	0.00	37	16	30.19
THAP9	0	genome.wustl.edu	37	4	83840028	83840028	+	Missense_Mutation	SNP	G	G	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	4	83840028	83840028	G	C	SNP	THAP9	ENST00000302236	human	ensembl	74_37	+1	known	missense	c.2663	p.S888T	0.492	NULL	pfam_Znf_C2CH,smart_Znf_C2CH,pfscan_Znf_C2CH	-	no_errors	THAP9	HGNC	ENSG00000168152				26	0	0.00	37	2	5.13
THBS1	0	genome.wustl.edu	37	15	39885624	39885624	+	Missense_Mutation	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	15	39885624	39885624	T	G	SNP	THBS1	ENST00000260356	human	ensembl	74_37	+1	known	missense	c.3022	p.F1008V	1.000	pfam_Thrombospondin_C,superfamily_ConA-like_lec_gl_sf	pfam_Thrombospondin_C,pfam_Thrombospondin_1_rpt,pfam_VWF_C,pfam_Thrombospondin_3-like_rpt,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Thrombospondin_1_rpt,smart_Laminin_G,smart_VWF_C,smart_Thrombospondin_1_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Thrombospondin_1_rpt,pfscan_VWF_C	-	no_errors	THBS1	HGNC	ENSG00000137801	tier1	-	-	109	0	0.00	51	24	32.00
THEMIS	0	genome.wustl.edu	37	6	128134756	128134756	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	6	128134756	128134756	G	A	SNP	THEMIS	ENST00000543064	human	ensembl	74_37	-1	known	missense	c.1030	p.R344W	0.991	NULL	NULL	-	no_errors	THEMIS	HGNC	ENSG00000172673	tier1	-	-	25	0	0.00	46	8	14.81
TLE4	0	genome.wustl.edu	37	9	82321669	82321669	+	Missense_Mutation	SNP	C	C	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	9	82321669	82321669	C	A	SNP	TLE4	ENST00000376520	human	ensembl	74_37	+1	known	missense	c.791	p.S264Y	0.937	NULL	pfam_Groucho/TLE_N,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Groucho_enhance	-	no_errors	TLE4	HGNC	ENSG00000106829	tier1	-	-	19	0	0.00	14	10	41.67
TLR4	0	genome.wustl.edu	37	9	120475582	120475582	+	Silent	SNP	T	T	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	9	120475582	120475582	T	C	SNP	TLR4	ENST00000355622	human	ensembl	74_37	+1	known	silent	c.1176	p.S392	0.914	pirsf_Toll-like_receptor,smart_Leu-rich_rpt_typical-subtyp	pirsf_Toll-like_receptor,pfam_TIR_dom,pfam_Leu-rich_rpt,superfamily_TIR_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_TIR_dom,pfscan_TIR_dom	-	no_errors	TLR4	HGNC	ENSG00000136869	tier1	-	-	20	0	0.00	11	10	47.62
TLR6	0	genome.wustl.edu	37	4	38829336	38829336	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	4	38829336	38829336	G	T	SNP	TLR6	ENST00000381950	human	ensembl	74_37	-1	known	missense	c.1759	p.L587M	0.894	pirsf_Toll-like_receptor	pirsf_Toll-like_receptor,pfam_TIR_dom,pfam_Leu-rich_rpt,pfam_Cys-rich_flank_reg_C,superfamily_TIR_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_TIR_dom,pfscan_TIR_dom	-	no_errors	TLR6	HGNC	ENSG00000174130	tier1	-	-	70	0	0.00	49	4	7.55
TMEM5	0	genome.wustl.edu	37	12	64174918	64174918	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	12	64174918	64174918	G	A	SNP	TMEM5	ENST00000261234	human	ensembl	74_37	+1	known	missense	c.289	p.D97N	0.318	NULL	pfam_Exostosin	-	no_errors	TMEM5	HGNC	ENSG00000118600	tier1	-	-	16	0	0.00	14	13	48.15
TMPRSS5	0	genome.wustl.edu	37	11	113568120	113568120	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	11	113568120	113568120	C	T	SNP	TMPRSS5	ENST00000299882	human	ensembl	74_37	-1	known	missense	c.349	p.E117K	0.162	superfamily_Srcr_rcpt-rel	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,superfamily_Srcr_rcpt-rel,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	TMPRSS5	HGNC	ENSG00000166682	tier1	-	-	19	0	0.00	34	14	29.17
TMTC4	0	genome.wustl.edu	37	13	101278362	101278362	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	13	101278362	101278362	G	T	SNP	TMTC4	ENST00000342624	human	ensembl	74_37	-1	known	missense	c.1549	p.Q517K	1.000	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_1,pfam_DUF1736,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TMTC4	HGNC	ENSG00000125247	tier1	-	-	44	0	0.00	44	4	8.33
TNXB	0	genome.wustl.edu	37	6	32064958	32064958	+	Silent	SNP	G	G	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	6	32064958	32064958	G	C	SNP	TNXB	ENST00000375247	human	ensembl	74_37	-1	known	silent	c.672	p.G224	0.900	pfam_EGF_extracell,smart_EG-like_dom	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNXB	HGNC	ENSG00000168477	tier1	-	-	67	0	0.00	79	29	26.85
TP53	0	genome.wustl.edu	37	17	7578212	7578212	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	17	7578212	7578212	G	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	nonsense	c.637	p.R213*	0.893	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	449	0	0.00	102	309	75.18
TPTE	0	genome.wustl.edu	37	21	11020889	11020889	+	RNA	SNP	C	C	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	21	11020889	11020889	C	A	SNP	TPTE	ENST00000415664	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	TPTE	HGNC	ENSG00000166157	tier1	-	-	180	0	0.00	131	47	26.40
TRPM1	0	genome.wustl.edu	37	15	31338420	31338420	+	Missense_Mutation	SNP	A	A	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	15	31338420	31338420	A	C	SNP	TRPM1	ENST00000542188	human	ensembl	74_37	-1	known	missense	c.1832	p.L611R	1.000	NULL	pfam_Ion_trans_dom	-	no_errors	TRPM1	HGNC	ENSG00000134160	tier1	-	-	9	0	0.00	4	6	60.00
TSG101	0	genome.wustl.edu	37	11	18537669	18537669	+	Missense_Mutation	SNP	C	C	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	11	18537669	18537669	C	G	SNP	TSG101	ENST00000251968	human	ensembl	74_37	-1	known	missense	c.170	p.G57A	1.000	pfam_UEV_N,superfamily_UBQ-conjugating_enzyme/RWD	pfam_UEV_N,pfam_Steadiness_box,superfamily_UBQ-conjugating_enzyme/RWD	-	no_errors	TSG101	HGNC	ENSG00000074319	tier1	-	-	35	0	0.00	40	5	11.11
TTBK1	0	genome.wustl.edu	37	6	43250725	43250725	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	6	43250725	43250725	G	T	SNP	TTBK1	ENST00000259750	human	ensembl	74_37	+1	known	missense	c.2247	p.E749D	0.754	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TTBK1	HGNC	ENSG00000146216				14	0	0.00	47	5	9.62
U2SURP	0	genome.wustl.edu	37	3	142747238	142747238	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	3	142747238	142747238	C	T	SNP	U2SURP	ENST00000473835	human	ensembl	74_37	+1	known	missense	c.1436	p.S479F	1.000	superfamily_Surp,smart_Surp	pfam_Surp,pfam_RRM_dom,superfamily_Surp,superfamily_ENTH_VHS,smart_RRM_dom,smart_Surp,smart_CID_dom,pfscan_Surp,pfscan_RRM_dom	-	no_errors	U2SURP	HGNC	ENSG00000163714	tier1	-	-	41	0	0.00	68	5	6.85
UBE2N	0	genome.wustl.edu	37	12	93804925	93804925	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	12	93804925	93804925	C	T	SNP	UBE2N	ENST00000318066	human	ensembl	74_37	-1	known	missense	c.181	p.E61K	1.000	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	-	no_errors	UBE2N	HGNC	ENSG00000177889	tier1	-	-	38	0	0.00	31	30	49.18
UBE2W	0	genome.wustl.edu	37	8	74791117	74791117	+	Frame_Shift_Del	DEL	C	C	-			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	8	74791117	74791117	C	0	DEL	UBE2W	ENST00000419880	human	ensembl	74_37	-1	known	frame_shift_del	c.28	p.A10fs	1.000	NULL	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	-	no_errors	UBE2W	HGNC	ENSG00000104343				70	0	0.00	74	8	9.76
UBE3B	0	genome.wustl.edu	37	12	109937476	109937476	+	Missense_Mutation	SNP	T	T	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	12	109937476	109937476	T	A	SNP	UBE3B	ENST00000342494	human	ensembl	74_37	+1	known	missense	c.979	p.L327I	0.936	NULL	pfam_HECT,pfam_IQ_motif_EF-hand-BS,superfamily_HECT,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,smart_HECT,pfscan_HECT,pfscan_IQ_motif_EF-hand-BS	-	no_errors	UBE3B	HGNC	ENSG00000151148	tier1	-	-	65	0	0.00	91	14	13.33
UNC13A	0	genome.wustl.edu	37	19	17758183	17758183	+	Silent	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	19	17758183	17758183	G	T	SNP	UNC13A	ENST00000428389	human	ensembl	74_37	-1	known	silent	c.2199	p.I733	1.000	NULL	pfam_Munc13_subgr_dom-2,pfam_C2_dom,pfam_Ca-dep_secretion_activator,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_C2_dom,smart_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_C2_dom	-	no_errors	UNC13A	HGNC	ENSG00000130477				34	0	0.00	40	4	9.09
VEPH1	0	genome.wustl.edu	37	3	157188234	157188234	+	Missense_Mutation	SNP	T	T	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	3	157188234	157188234	T	A	SNP	VEPH1	ENST00000362010	human	ensembl	74_37	-1	known	missense	c.223	p.I75F	0.994	superfamily_ARM-type_fold	pfam_Pleckstrin_homology,superfamily_ARM-type_fold,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	VEPH1	HGNC	ENSG00000197415	tier1	-	-	80	0	0.00	86	16	15.69
VPS35	0	genome.wustl.edu	37	16	46710559	46710559	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	16	46710559	46710559	G	A	SNP	VPS35	ENST00000299138	human	ensembl	74_37	-1	known	missense	c.850	p.R284W	1.000	pfam_VPS35,superfamily_ARM-type_fold	pfam_VPS35,superfamily_ARM-type_fold	-	no_errors	VPS35	HGNC	ENSG00000069329	tier1	-	-	36	0	0.00	46	24	34.29
VWA7	0	genome.wustl.edu	37	6	31741184	31741184	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	6	31741184	31741184	C	T	SNP	VWA7	ENST00000375686	human	ensembl	74_37	-1	known	missense	c.752	p.R251Q	0.083	NULL	NULL	-	no_errors	VWA7	HGNC	ENSG00000204396	tier1	-	-	52	0	0.00	85	28	24.78
WDR17	0	genome.wustl.edu	37	4	177046415	177046415	+	Silent	SNP	T	T	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	4	177046415	177046415	T	C	SNP	WDR17	ENST00000280190	human	ensembl	74_37	+1	known	silent	c.771	p.S257	0.817	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR17	HGNC	ENSG00000150627	tier1	-	-	51	0	0.00	32	12	27.27
WDR17	0	genome.wustl.edu	37	4	177052846	177052846	+	Missense_Mutation	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	4	177052846	177052846	T	G	SNP	WDR17	ENST00000280190	human	ensembl	74_37	+1	known	missense	c.1127	p.L376R	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR17	HGNC	ENSG00000150627	tier1	-	-	68	0	0.00	42	35	45.45
WNK1	0	genome.wustl.edu	37	12	1005335	1005335	+	Silent	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	12	1005335	1005335	G	T	SNP	WNK1	ENST00000530271	human	ensembl	74_37	+1	known	silent	c.7176	p.V2392	0.001	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Kinase_OSR1/WNK_CCT,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	WNK1	HGNC	ENSG00000060237				46	0	0.00	33	2	5.71
XKR4	0	genome.wustl.edu	37	8	56015128	56015128	+	Missense_Mutation	SNP	A	A	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	8	56015128	56015128	A	G	SNP	XKR4	ENST00000327381	human	ensembl	74_37	+1	known	missense	c.80	p.H27R	1.000	NULL	pfam_Transport_prot_XK	-	no_errors	XKR4	HGNC	ENSG00000206579	tier1	-	-	21	0	0.00	23	5	17.86
XRCC6	0	genome.wustl.edu	37	22	42057349	42057349	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	22	42057349	42057349	G	A	SNP	XRCC6	ENST00000359308	human	ensembl	74_37	+1	known	missense	c.1537	p.A513T	0.797	pirsf_Ku70,pfam_Ku_C,superfamily_SPOC_like_C_dom,tigrfam_Ku70	pirsf_Ku70,pfam_Ku_N,pfam_Ku70/Ku80_beta-barrel_dom,pfam_Ku_C,pfam_SAP_dom,superfamily_SPOC_like_C_dom,smart_Ku70/Ku80_beta-barrel_dom,smart_SAP_dom,pfscan_SAP_dom,tigrfam_Ku70	-	no_errors	XRCC6	HGNC	ENSG00000196419	tier1	rs61754572	-	66	0	0.00	47	18	27.69
YAF2	0	genome.wustl.edu	37	12	42629563	42629563	+	RNA	DEL	A	A	-			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	12	42629563	42629563	A	-	DEL	YAF2	ENST00000541702	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.986	-	-	-	no_errors	YAF2	HGNC	ENSG00000015153	tier1			16	0	0.00	23	4	14.81
ZBED6	0	genome.wustl.edu	37	1	203769532	203769532	+	Missense_Mutation	SNP	G	G	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	1	203769532	203769532	G	T	SNP	ZBED6	ENST00000550078	human	ensembl	74_37	+1	known	missense	c.2882	p.S961I	0.998	NULL	pfam_Znf_BED_prd,pfam_HATC_dom_C,superfamily_RNaseH-like_dom,smart_Znf_BED_prd,pfscan_Znf_BED_prd	-	no_errors	ZBED6	HGNC	ENSG00000257315	tier1	-	-	46	0	0.00	59	4	6.35
ZCCHC5	0	genome.wustl.edu	37	X	77913151	77913151	+	Missense_Mutation	SNP	A	A	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	X	77913151	77913151	A	C	SNP	ZCCHC5	ENST00000321110	human	ensembl	74_37	-1	known	missense	c.767	p.V256G	0.011	NULL	pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC5	HGNC	ENSG00000179300	tier1	-	-	17	0	0.00	29	29	50.00
ZFAND4	0	genome.wustl.edu	37	10	46143749	46143749	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	10	46143749	46143749	G	A	SNP	ZFAND4	ENST00000344646	human	ensembl	74_37	-1	known	missense	c.562	p.R188C	0.000	NULL	pfam_Ubiquitin_dom,pfam_Znf_AN1,smart_Ubiquitin_dom,smart_Znf_AN1,pfscan_Znf_AN1,pfscan_Ubiquitin_supergroup,prints_Ubiquitin	-	no_errors	ZFAND4	HGNC	ENSG00000172671	tier1	rs146833659	-	33	0	0.00	22	10	31.25
ZFHX4	0	genome.wustl.edu	37	8	77690559	77690559	+	Missense_Mutation	SNP	A	A	C			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	8	77690559	77690559	A	C	SNP	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	missense	c.3209	p.K1070T	1.000	smart_Znf_U1,smart_Znf_C2H2-like	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656	tier1	-	-	48	0	0.00	69	14	16.87
ZMAT1	0	genome.wustl.edu	37	X	101138901	101138901	+	Missense_Mutation	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	X	101138901	101138901	T	G	SNP	ZMAT1	ENST00000372782	human	ensembl	74_37	-1	known	missense	c.1498	p.S500R	0.978	NULL	superfamily_Asn/Gln_tRNA_amidoTrfrase-rel,smart_Znf_U1,smart_Znf_C2H2-like	-	no_errors	ZMAT1	HGNC	ENSG00000166432	tier1	-	-	28	0	0.00	31	26	45.61
ZMAT1	0	genome.wustl.edu	37	X	101138908	101138908	+	Silent	SNP	T	T	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	X	101138908	101138908	T	A	SNP	ZMAT1	ENST00000372782	human	ensembl	74_37	-1	known	silent	c.1491	p.V497	0.000	NULL	superfamily_Asn/Gln_tRNA_amidoTrfrase-rel,smart_Znf_U1,smart_Znf_C2H2-like	-	no_errors	ZMAT1	HGNC	ENSG00000166432	tier1	-	-	27	0	0.00	30	26	46.43
ZMYND11	0	genome.wustl.edu	37	10	283566	283566	+	Silent	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	10	283566	283566	G	A	SNP	ZMYND11	ENST00000381591	human	ensembl	74_37	+1	known	silent	c.558	p.P186	0.258	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain	pfam_PWWP_dom,pfam_Bromodomain,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Bromodomain,smart_PWWP_dom,pfscan_PWWP_dom,pfscan_Znf_MYND,pfscan_Znf_PHD-finger,pfscan_Bromodomain	-	no_errors	ZMYND11	HGNC	ENSG00000015171	tier1	-	-	33	0	0.00	34	11	24.44
ZNF112	0	genome.wustl.edu	37	19	44832455	44832455	+	Nonsense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	19	44832455	44832455	G	A	SNP	ZNF112	ENST00000536500	human	ensembl	74_37	-1	known	nonsense	c.1924	p.Q642*	0.442	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF112	HGNC	ENSG00000062370	tier1	-	-	69	0	0.00	85	30	26.09
ZNF208	0	genome.wustl.edu	37	19	22155862	22155862	+	Silent	SNP	A	A	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	19	22155862	22155862	A	G	SNP	ZNF208	ENST00000397126	human	ensembl	74_37	-1	novel	silent	c.1974	p.I658	0.126	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF208	HGNC	ENSG00000160321	tier1	-	-	73	0	0.00	5	48	90.57
ZNF329	0	genome.wustl.edu	37	19	58640556	58640556	+	Silent	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	19	58640556	58640556	G	A	SNP	ZNF329	ENST00000358067	human	ensembl	74_37	-1	known	silent	c.315	p.P105	0.002	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF329	HGNC	ENSG00000181894	tier1	-	-	28	0	0.00	65	21	24.42
ZNF451	0	genome.wustl.edu	37	6	56966830	56966830	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	6	56966830	56966830	G	A	SNP	ZNF451	ENST00000370708	human	ensembl	74_37	+1	known	missense	c.1616	p.R539Q	1.000	NULL	pfam_LAP2alpha	-	no_errors	ZNF451	HGNC	ENSG00000112200	tier1	-	-	22	0	0.00	21	14	40.00
ZNF469	0	genome.wustl.edu	37	16	88496484	88496484	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	16	88496484	88496484	C	T	SNP	ZNF469	ENST00000437464	human	ensembl	74_37	+1	known	missense	c.2606	p.A869V	0.026	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF469	HGNC	ENSG00000225614	tier1	-	-	21	0	0.00	21	7	25.00
ZNF512B	0	genome.wustl.edu	37	20	62598760	62598760	+	Missense_Mutation	SNP	C	C	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	20	62598760	62598760	C	T	SNP	ZNF512B	ENST00000217130	human	ensembl	74_37	-1	known	missense	c.238	p.E80K	0.995	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF512B	HGNC	ENSG00000196700	tier1	-	-	67	0	0.00	92	26	22.03
ZNF561	0	genome.wustl.edu	37	19	9721115	9721115	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	19	9721115	9721115	G	A	SNP	ZNF561	ENST00000302851	human	ensembl	74_37	-1	known	missense	c.1222	p.R408C	0.003	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF561	HGNC	ENSG00000171469	tier1	-	-	48	0	0.00	13	45	77.59
ZNF577	0	genome.wustl.edu	37	19	52383627	52383628	+	Frame_Shift_Ins	INS	-	-	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	19	52383627	52383628	-	T	INS	ZNF577	ENST00000301399	human	ensembl	74_37	-1	known	frame_shift_ins	c.9_8	p.N3fs	0.000:0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF577	HGNC	ENSG00000161551	tier1			19	0	0.00	28	7	20.00
ZNF585B	0	genome.wustl.edu	37	19	37681019	37681019	+	Missense_Mutation	SNP	A	A	T			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	19	37681019	37681019	A	T	SNP	ZNF585B	ENST00000532828	human	ensembl	74_37	-1	known	missense	c.106	p.F36I	0.990	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF585B	HGNC	ENSG00000245680	tier1	-	-	50	0	0.00	91	20	18.02
ZNF648	0	genome.wustl.edu	37	1	182026619	182026619	+	Missense_Mutation	SNP	G	G	A			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	1	182026619	182026619	G	A	SNP	ZNF648	ENST00000339948	human	ensembl	74_37	-1	novel	missense	c.527	p.A176V	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF648	HGNC	ENSG00000179930	tier1	-	-	30	0	0.00	32	19	37.25
ZNF703	0	genome.wustl.edu	37	8	37556150	37556150	+	Nonsense_Mutation	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	8	37556150	37556150	T	G	SNP	ZNF703	ENST00000331569	human	ensembl	74_37	+1	known	nonsense	c.1731	p.Y577*	0.997	NULL	pfam_Tscrpt_rep_NocA-like,pfscan_Znf_C2H2	-	no_errors	ZNF703	HGNC	ENSG00000183779	tier1	-	-	33	0	0.00	33	14	29.79
ZSCAN5A	0	genome.wustl.edu	37	19	56736039	56736039	+	Missense_Mutation	SNP	T	T	G			TCGA-IG-A4QS-01A-11D-A27G-09	TCGA-IG-A4QS-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a8380cd5-4750-4dc4-a922-41d57d2ecf1d	1f4ab858-e433-48b0-8984-b2ac05962303	19	56736039	56736039	T	G	SNP	ZSCAN5A	ENST00000391713	human	ensembl	74_37	-1	known	missense	c.377	p.K126T	0.017	superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN5A	HGNC	ENSG00000131848	tier1	-	-	148	0	0.00	136	25	15.53
