Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ABCC5	0	genome.wustl.edu	37	3	183681223	183681223	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	3	183681223	183681223	G	A	SNP	ABCC5	ENST00000334444	human	ensembl	74_37	-1	known	missense	c.2185	p.R729W	1.000	superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC5	HGNC	ENSG00000114770				69	0	0.00	57	4	6.56
ABCF2	0	genome.wustl.edu	37	7	150912711	150912711	+	Silent	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	7	150912711	150912711	G	A	SNP	ABCF2	ENST00000222388	human	ensembl	74_37	-1	known	silent	c.1509	p.Y503	0.180	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCF2	HGNC	ENSG00000033050				54	0	0.00	29	2	6.45
ACAP3	0	genome.wustl.edu	37	1	1238596	1238596	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	1	1238596	1238596	G	C	SNP	ACAP3	ENST00000353662	human	ensembl	74_37	-1	known	missense	c.45	p.F15L	0.997	NULL	pfam_ArfGAP,pfam_Ankyrin_rpt,pfam_Pleckstrin_homology,superfamily_Ankyrin_rpt-contain_dom,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	ACAP3	HGNC	ENSG00000131584				18	0	0.00	11	2	15.38
ADAM10	0	genome.wustl.edu	37	15	58925538	58925538	+	Nonsense_Mutation	SNP	C	C	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	15	58925538	58925538	C	A	SNP	ADAM10	ENST00000260408	human	ensembl	74_37	-1	known	nonsense	c.1033	p.E345*	1.000	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_Blood-coag_inhib_Disintegrin,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B	-	no_errors	ADAM10	HGNC	ENSG00000137845	tier1	-	-	48	0	0.00	39	12	23.53
ADCK1	0	genome.wustl.edu	37	14	78399710	78399710	+	Silent	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	14	78399710	78399710	C	T	SNP	ADCK1	ENST00000238561	human	ensembl	74_37	+1	known	silent	c.1548	p.C516	0.989	NULL	pfam_UbiB_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom	-	no_errors	ADCK1	HGNC	ENSG00000063761				48	0	0.00	44	3	6.38
AFG3L2	0	genome.wustl.edu	37	18	12353077	12353077	+	Silent	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	18	12353077	12353077	C	T	SNP	AFG3L2	ENST00000269143	human	ensembl	74_37	-1	known	silent	c.1245	p.K415	1.000	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_FtsH	pfam_Peptidase_M41,pfam_ATPase_AAA_core,pfam_Pept_M41_FtsH_extracell,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_FtsH	-	no_errors	AFG3L2	HGNC	ENSG00000141385	tier1	-	-	25	0	0.00	34	7	17.07
AGTPBP1	0	genome.wustl.edu	37	9	88257808	88257808	+	Silent	SNP	C	C	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	9	88257808	88257808	C	A	SNP	AGTPBP1	ENST00000376109	human	ensembl	74_37	-1	known	silent	c.1272	p.P424	0.998	NULL	pfam_Peptidase_M14,superfamily_ARM-type_fold	-	no_errors	AGTPBP1	HGNC	ENSG00000135049	tier1	-	-	63	0	0.00	63	4	5.97
AMOT	0	genome.wustl.edu	37	X	112058941	112058941	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	X	112058941	112058941	G	T	SNP	AMOT	ENST00000371959	human	ensembl	74_37	-1	known	nonsense	c.1037	p.S346*	0.000	NULL	pfam_Angiomotin_C,superfamily_Prefoldin,prints_Angiomotin	-	no_errors	AMOT	HGNC	ENSG00000126016				84	0	0.00	52	4	7.14
ANAPC1	0	genome.wustl.edu	37	2	112529998	112529998	+	Nonsense_Mutation	SNP	G	G	C			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	2	112529998	112529998	G	C	SNP	ANAPC1	ENST00000341068	human	ensembl	74_37	-1	known	nonsense	c.5639	p.S1880*	0.985	NULL	NULL	-	no_errors	ANAPC1	HGNC	ENSG00000153107	tier1	-	-	17	0	0.00	10	5	33.33
ANKRD26	0	genome.wustl.edu	37	10	27355272	27355275	+	RNA	DEL	ATTA	ATTA	-			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	ATTA	ATTA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	10	27355272	27355275	ATTA	-	DEL	ANKRD26	ENST00000473304	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000:0.000:0.000	-	-	-	no_errors	ANKRD26	HGNC	ENSG00000107890	tier1			10	0	0.00	4	3	42.86
ANKRD28	0	genome.wustl.edu	37	3	15778589	15778589	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	3	15778589	15778589	C	A	SNP	ANKRD28	ENST00000383777	human	ensembl	74_37	-1	known	missense	c.512	p.R171L	1.000	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD28	HGNC	ENSG00000206560				35	0	0.00	34	2	5.56
ANKRD30BP2	0	genome.wustl.edu	37	21	14417863	14417863	+	RNA	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	21	14417863	14417863	G	T	SNP	ANKRD30BP2	ENST00000507941	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.014	-	-	-	no_errors	ANKRD30BP2	HGNC	ENSG00000224309	tier1	rs9968011	-	8	0	0.00	5	6	54.55
AP3B1	0	genome.wustl.edu	37	5	77330193	77330193	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	5	77330193	77330193	G	T	SNP	AP3B1	ENST00000255194	human	ensembl	74_37	-1	known	missense	c.2886	p.F962L	1.000	pirsf_AP3_beta	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP3_beta	-	no_errors	AP3B1	HGNC	ENSG00000132842	tier1	-	-	40	0	0.00	47	4	7.84
AP4E1	0	genome.wustl.edu	37	15	51291343	51291343	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	15	51291343	51291343	G	T	SNP	AP4E1	ENST00000261842	human	ensembl	74_37	+1	known	missense	c.2979	p.Q993H	0.994	pfam_Coatomer_bsu_C,pirsf_AP4_complex_esu	pfam_Clathrin/coatomer_adapt-like_N,pfam_Coatomer_bsu_C,superfamily_ARM-type_fold,pirsf_AP4_complex_esu	-	no_errors	AP4E1	HGNC	ENSG00000081014	tier1	-	-	32	0	0.00	44	4	8.33
APOB	0	genome.wustl.edu	37	2	21250902	21250902	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	2	21250902	21250902	G	T	SNP	APOB	ENST00000233242	human	ensembl	74_37	-1	known	missense	c.1865	p.S622Y	0.887	superfamily_Vitellinogen_superhlx,pfscan_Lipid_transpt_N	pfam_Lipid_transpt_N,pfam_Vitellinogen_open_b-sht,pfam_ApoB100_C,pfam_Lipid_transpt_open_b-sht,superfamily_Lipid_transp_b-sht_shell,superfamily_Vitellinogen_superhlx,superfamily_ARM-type_fold,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	APOB	HGNC	ENSG00000084674				33	0	0.00	31	2	6.06
ARAP2	0	genome.wustl.edu	37	4	36230811	36230811	+	Nonsense_Mutation	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	4	36230811	36230811	G	A	SNP	ARAP2	ENST00000303965	human	ensembl	74_37	-1	known	nonsense	c.298	p.Q100*	0.000	NULL	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,pfam_ArfGAP,pfam_SAM_type1,pfam_SAM_2,pfam_Ras-assoc,superfamily_Rho_GTPase_activation_prot,superfamily_SAM/pointed,smart_SAM,smart_Pleckstrin_homology,smart_ArfGAP,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SAM,pfscan_ArfGAP,pfscan_RhoGAP_dom,prints_ArfGAP	-	no_errors	ARAP2	HGNC	ENSG00000047365	tier1	-	-	33	0	0.00	26	7	21.21
ARHGAP35	0	genome.wustl.edu	37	19	47423066	47423066	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	19	47423066	47423066	G	T	SNP	ARHGAP35	ENST00000404338	human	ensembl	74_37	+1	known	missense	c.1134	p.K378N	1.000	smart_FF_domain	pfam_RhoGAP_dom,pfam_Small_GTPase,pfam_FF_domain,superfamily_Rho_GTPase_activation_prot,superfamily_P-loop_NTPase,superfamily_FF_domain,smart_FF_domain,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP35	HGNC	ENSG00000160007				56	0	0.00	37	4	9.76
ARID2	0	genome.wustl.edu	37	12	46299067	46299067	+	RNA	DEL	A	A	-			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	12	46299067	46299067	A	-	DEL	ARID2	ENST00000479608	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.911	-	-	-	no_errors	ARID2	HGNC	ENSG00000189079	tier1			12	0	0.00	12	4	25.00
ARMCX4	0	genome.wustl.edu	37	X	100748828	100748828	+	Frame_Shift_Del	DEL	A	A	-			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	X	100748828	100748828	A	-	DEL	ARMCX4	ENST00000423738	human	ensembl	74_37	+1	putative	frame_shift_del	c.5252	p.A1753fs	0.000	NULL	pfam_ARM-rpt_dom,superfamily_ARM-type_fold,pfscan_Armadillo	-	no_errors	ARMCX4	HGNC	ENSG00000196440	tier1			51	0	0.00	32	3	8.57
ATAD2B	0	genome.wustl.edu	37	2	24090793	24090793	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	2	24090793	24090793	G	T	SNP	ATAD2B	ENST00000238789	human	ensembl	74_37	-1	known	missense	c.1100	p.A367E	1.000	NULL	pfam_ATPase_AAA_core,pfam_Bromodomain,pfam_IstB_ATP-bd,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_AAA+_ATPase,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	ATAD2B	HGNC	ENSG00000119778				57	0	0.00	53	4	7.02
ATM	0	genome.wustl.edu	37	11	108170474	108170474	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	11	108170474	108170474	C	A	SNP	ATM	ENST00000278616	human	ensembl	74_37	+1	known	missense	c.5039	p.P1680H	1.000	superfamily_ARM-type_fold	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_TAN,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	ATM	HGNC	ENSG00000149311	tier1	-	-	29	0	0.00	48	4	7.69
ATP2A3	0	genome.wustl.edu	37	17	3848001	3848001	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	17	3848001	3848001	G	T	SNP	ATP2A3	ENST00000359983	human	ensembl	74_37	-1	known	missense	c.1284	p.N428K	0.992	superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Ca-transp_IIA	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_IIA,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2A3	HGNC	ENSG00000074370	tier1	-	-	77	0	0.00	34	4	10.53
ATP8A1	0	genome.wustl.edu	37	4	42627653	42627653	+	Missense_Mutation	SNP	A	A	G			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	4	42627653	42627653	A	G	SNP	ATP8A1	ENST00000381668	human	ensembl	74_37	-1	known	missense	c.242	p.F81S	1.000	tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8A1	HGNC	ENSG00000124406	tier1	-	-	70	0	0.00	64	18	21.95
BAALC	0	genome.wustl.edu	37	8	104153150	104153150	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	8	104153150	104153150	G	A	SNP	BAALC	ENST00000297574	human	ensembl	74_37	+1	known	missense	c.25	p.D9N	0.995	pfam_BAALC	pfam_BAALC	-	no_errors	BAALC	HGNC	ENSG00000164929				11	0	0.00	3	3	50.00
BAI3	0	genome.wustl.edu	37	6	70070788	70070788	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	6	70070788	70070788	G	A	SNP	BAI3	ENST00000370598	human	ensembl	74_37	+1	known	missense	c.3623	p.R1208Q	1.000	NULL	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_CUB_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI3	HGNC	ENSG00000135298				31	0	0.00	37	2	5.13
BCAR1	0	genome.wustl.edu	37	16	75276907	75276907	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	16	75276907	75276907	C	T	SNP	BCAR1	ENST00000418647	human	ensembl	74_37	-1	known	missense	c.232	p.V78M	1.000	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain,prints_Spectrin_alpha_SH3	pfam_CAS_DUF3513,pfam_Serine_rich,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	BCAR1	HGNC	ENSG00000050820				37	0	0.00	15	2	11.76
BICC1	0	genome.wustl.edu	37	10	60549211	60549211	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	10	60549211	60549211	G	T	SNP	BICC1	ENST00000373886	human	ensembl	74_37	+1	known	missense	c.790	p.V264L	1.000	NULL	pfam_KH_dom_type_1,pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_KH_dom,smart_SAM,pfscan_SAM,pfscan_KH_dom_type_1	-	no_errors	BICC1	HGNC	ENSG00000122870				28	0	0.00	15	2	11.76
BTN1A1	0	genome.wustl.edu	37	6	26506976	26506976	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	6	26506976	26506976	C	A	SNP	BTN1A1	ENST00000244513	human	ensembl	74_37	+1	known	missense	c.775	p.L259I	0.999	NULL	pfam_SPRY_rcpt,pfam_Ig_V-set,pfam_CD80_C2-set,superfamily_ConA-like_lec_gl_sf,smart_Ig_sub,smart_Ig_V-set_subgr,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Ig-like_dom,prints_Butyrophylin	-	no_errors	BTN1A1	HGNC	ENSG00000124557	tier1	-	-	52	0	0.00	53	5	8.62
BUB1B	0	genome.wustl.edu	37	15	40504783	40504783	+	Silent	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	15	40504783	40504783	C	T	SNP	BUB1B	ENST00000412359	human	ensembl	74_37	+1	known	silent	c.2511	p.C837	1.000	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom	pfam_Mad3_BUB1_I,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Mad3_BUB1_I	-	no_errors	BUB1B	HGNC	ENSG00000156970				47	0	0.00	66	4	5.71
C17orf105	0	genome.wustl.edu	37	17	41859202	41859202	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	17	41859202	41859202	G	A	SNP	C17orf105	ENST00000449302	human	ensembl	74_37	+1	known	missense	c.256	p.A86T	0.970	NULL	NULL	-	no_errors	C17orf105	HGNC	ENSG00000231256	tier1	-	-	56	0	0.00	42	4	8.70
C1orf140	0	genome.wustl.edu	37	1	221507319	221507319	+	RNA	SNP	C	C	G			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	1	221507319	221507319	C	G	SNP	C1orf140	ENST00000434398	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-421L10.1	Clone_based_vega_gene	ENSG00000234754	tier1	-	-	55	0	0.00	27	7	20.59
C2CD3	0	genome.wustl.edu	37	11	73753117	73753117	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	11	73753117	73753117	G	C	SNP	C2CD3	ENST00000334126	human	ensembl	74_37	-1	known	missense	c.5642	p.S1881C	1.000	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom	-	no_errors	C2CD3	HGNC	ENSG00000168014	tier1	-	-	53	0	0.00	40	15	27.27
C4orf50	0	genome.wustl.edu	37	4	5991404	5991404	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	4	5991404	5991404	T	C	SNP	C4orf50	ENST00000531445	human	ensembl	74_37	-1	known	missense	c.95	p.Q32R	0.000	NULL	NULL	-	no_errors	C4orf50	HGNC	ENSG00000181215	tier1	-	-	27	0	0.00	18	3	14.29
CALB1	0	genome.wustl.edu	37	8	91078168	91078168	+	Silent	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	8	91078168	91078168	C	T	SNP	CALB1	ENST00000265431	human	ensembl	74_37	-1	known	silent	c.408	p.K136	0.995	NULL	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CALB1	HGNC	ENSG00000104327	tier1	-	-	50	0	0.00	47	14	22.95
CASK	0	genome.wustl.edu	37	X	41524635	41524635	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	X	41524635	41524635	G	T	SNP	CASK	ENST00000378163	human	ensembl	74_37	-1	known	missense	c.603	p.D201E	0.971	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_GK/Ca_channel_bsu,pfam_L27_C,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,pfam_SH3_2,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_L27,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Prot_kinase_dom,pfscan_Guanylate_kin-like	-	no_errors	CASK	HGNC	ENSG00000147044	tier1	-	-	48	0	0.00	35	10	22.22
CBR3-AS1	0	genome.wustl.edu	37	21	37504232	37504232	+	RNA	SNP	T	T	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	21	37504232	37504232	T	A	SNP	CBR3-AS1	ENST00000413862	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CBR3-AS1	HGNC	ENSG00000236830				23	0	0.00	15	4	21.05
CCDC178	0	genome.wustl.edu	37	18	30803178	30803178	+	Silent	SNP	A	A	C			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	18	30803178	30803178	A	C	SNP	CCDC178	ENST00000406524	human	ensembl	74_37	-1	known	silent	c.1824	p.L608	0.001	NULL	NULL	-	no_errors	CCDC178	HGNC	ENSG00000166960	tier1	-	-	36	0	0.00	23	6	20.69
CCDC81	0	genome.wustl.edu	37	11	86097108	86097108	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	11	86097108	86097108	G	T	SNP	CCDC81	ENST00000445632	human	ensembl	74_37	+1	known	missense	c.95	p.W32L	1.000	superfamily_IHF-like_DNA-bd_dom	superfamily_IHF-like_DNA-bd_dom	-	no_errors	CCDC81	HGNC	ENSG00000149201	tier1	-	-	88	0	0.00	70	4	5.41
CCR3	0	genome.wustl.edu	37	3	46306820	46306820	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	3	46306820	46306820	G	T	SNP	CCR3	ENST00000545097	human	ensembl	74_37	+1	known	missense	c.234	p.M78I	0.998	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Chemokine_rcpt,prints_Chemokine_CCR3,prints_Chemokine_CCR1	-	no_errors	CCR3	HGNC	ENSG00000183625				40	0	0.00	32	2	5.71
CD1C	0	genome.wustl.edu	37	1	158262075	158262075	+	Missense_Mutation	SNP	T	T	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	1	158262075	158262075	T	A	SNP	CD1C	ENST00000368170	human	ensembl	74_37	+1	known	missense	c.530	p.V177E	0.000	superfamily_MHC_I/II-like_Ag-recog	pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	CD1C	HGNC	ENSG00000158481	tier1	-	-	43	0	0.00	29	12	29.27
CD300A	0	genome.wustl.edu	37	17	72462866	72462866	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	17	72462866	72462866	G	T	SNP	CD300A	ENST00000360141	human	ensembl	74_37	+1	known	missense	c.24	p.L8F	1.000	NULL	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	CD300A	HGNC	ENSG00000167851	tier1	-	-	76	0	0.00	66	4	5.71
CDH10	0	genome.wustl.edu	37	5	24498600	24498600	+	Missense_Mutation	SNP	A	A	C			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	5	24498600	24498600	A	C	SNP	CDH10	ENST00000510477	human	ensembl	74_37	-1	known	missense	c.1285	p.C429G	1.000	superfamily_Cadherin-like	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH10	HGNC	ENSG00000040731	tier1	-	-	74	0	0.00	106	10	8.55
CDH11	0	genome.wustl.edu	37	16	65025827	65025827	+	Missense_Mutation	SNP	T	T	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	16	65025827	65025827	T	A	SNP	CDH11	ENST00000268603	human	ensembl	74_37	-1	known	missense	c.655	p.T219S	0.997	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH11	HGNC	ENSG00000140937	tier1	-	-	70	0	0.00	57	16	21.92
CDK2	0	genome.wustl.edu	37	12	56365555	56365555	+	RNA	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	12	56365555	56365555	G	T	SNP	CDK2	ENST00000554545	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.171	-	-	-	no_errors	CDK2	HGNC	ENSG00000123374	tier1	-	-	42	0	0.00	44	4	8.33
CDK5RAP2	0	genome.wustl.edu	37	9	123182069	123182069	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	9	123182069	123182069	G	C	SNP	CDK5RAP2	ENST00000349780	human	ensembl	74_37	-1	known	missense	c.4174	p.Q1392E	1.000	NULL	pfam_Spindle_assoc	-	no_errors	CDK5RAP2	HGNC	ENSG00000136861	tier1	-	-	56	0	0.00	43	14	24.56
CDKN1A	0	genome.wustl.edu	37	6	36652260	36652260	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	6	36652260	36652260	G	A	SNP	CDKN1A	ENST00000448526	human	ensembl	74_37	+1	known	missense	c.484	p.E162K	0.319	NULL	pfam_CDI	-	no_errors	CDKN1A	HGNC	ENSG00000124762				20	0	0.00	7	2	22.22
CDS1	0	genome.wustl.edu	37	4	85525396	85525396	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	4	85525396	85525396	G	T	SNP	CDS1	ENST00000295887	human	ensembl	74_37	+1	known	nonsense	c.118	p.E40*	1.000	pirsf_PC_Trfase_euk	pfam_PC_trans,pirsf_PC_Trfase_euk	-	no_errors	CDS1	HGNC	ENSG00000163624	tier1	-	-	55	0	0.00	61	4	6.15
CENPH	0	genome.wustl.edu	37	5	68491608	68491608	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	5	68491608	68491608	G	T	SNP	CENPH	ENST00000283006	human	ensembl	74_37	+1	known	missense	c.304	p.A102S	0.934	NULL	pfam_CENP-H	-	no_errors	CENPH	HGNC	ENSG00000153044				98	0	0.00	92	5	5.15
CHCHD2	0	genome.wustl.edu	37	7	56170694	56170694	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	7	56170694	56170694	C	T	SNP	CHCHD2	ENST00000395422	human	ensembl	74_37	-1	known	missense	c.311	p.G104E	0.943	NULL	pfam_CHCH	-	no_errors	CHCHD2	HGNC	ENSG00000106153	tier1	-	-	44	0	0.00	39	9	18.75
CHD5	0	genome.wustl.edu	37	1	6188558	6188558	+	Splice_Site	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	1	6188558	6188558	C	T	SNP	CHD5	ENST00000262450	human	ensembl	74_37	-1	known	splice_site	c.3730+1	e24+1	1.000	-	-	-	no_errors	CHD5	HGNC	ENSG00000116254	tier1	-	-	84	0	0.00	55	4	6.78
CHD9	0	genome.wustl.edu	37	16	53243720	53243720	+	Missense_Mutation	SNP	A	A	C			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	16	53243720	53243720	A	C	SNP	CHD9	ENST00000398510	human	ensembl	74_37	+1	known	missense	c.1779	p.K593N	1.000	NULL	pfam_SNF2_N,pfam_BRK_domain,pfam_Chromo_domain,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD9	HGNC	ENSG00000177200	tier1	-	-	12	0	0.00	6	5	45.45
CHIA	0	genome.wustl.edu	37	1	111860635	111860635	+	Silent	SNP	C	C	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	1	111860635	111860635	C	A	SNP	CHIA	ENST00000343320	human	ensembl	74_37	+1	known	silent	c.633	p.T211	0.999	pfam_Glyco_hydro18cat,superfamily_Glycoside_hydrolase_SF,smart_Chitinase_II	pfam_Glyco_hydro18cat,pfam_Chitin-bd_dom,superfamily_Glycoside_hydrolase_SF,superfamily_Chitin-bd_dom,smart_Chitinase_II,smart_Chitin-bd_dom,pfscan_Chitin-bd_dom	-	no_errors	CHIA	HGNC	ENSG00000134216				53	0	0.00	34	2	5.56
CNDP2	0	genome.wustl.edu	37	18	72186240	72186240	+	Missense_Mutation	SNP	A	A	G			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	18	72186240	72186240	A	G	SNP	CNDP2	ENST00000324262	human	ensembl	74_37	+1	known	missense	c.1267	p.T423A	0.998	pfam_Peptidase_M20,pirsf_GSH_degradosome_DUG1	pfam_Peptidase_M20,pfam_Peptidase_M20_dimer,superfamily_Peptidase_M20_dimer,pirsf_GSH_degradosome_DUG1	-	no_errors	CNDP2	HGNC	ENSG00000133313	tier1	-	-	61	0	0.00	28	7	20.00
CNKSR3	0	genome.wustl.edu	37	6	154727685	154727685	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	6	154727685	154727685	G	A	SNP	CNKSR3	ENST00000607772	human	ensembl	74_37	-1	known	missense	c.1471	p.R491W	0.988	pfam_CNKSR2	pfam_CNKSR2,pfam_CRIC_domain_Chordata,pfam_SAM_type1,pfam_SAM_2,pfam_PDZ,superfamily_SAM/pointed,superfamily_PDZ,smart_SAM,smart_PDZ,pfscan_PDZ,pfscan_SAM	-	no_errors	CNKSR3	HGNC	ENSG00000153721	tier1	-	-	52	0	0.00	36	10	21.74
CNOT1	0	genome.wustl.edu	37	16	58577315	58577316	+	Frame_Shift_Ins	INS	-	-	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	16	58577315	58577316	-	A	INS	CNOT1	ENST00000441024	human	ensembl	74_37	-1	known	frame_shift_ins	c.4630_4629	p.L1543fs	0.004:0.000	NULL	superfamily_ARM-type_fold	-	no_errors	CNOT1	HGNC	ENSG00000125107	tier1			39	0	0.00	43	3	6.52
CNTN6	0	genome.wustl.edu	37	3	1367589	1367589	+	Missense_Mutation	SNP	A	A	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	3	1367589	1367589	A	T	SNP	CNTN6	ENST00000350110	human	ensembl	74_37	+1	known	missense	c.1037	p.N346I	0.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN6	HGNC	ENSG00000134115	tier1	-	-	35	0	0.00	32	8	20.00
CNTRL	0	genome.wustl.edu	37	9	123903795	123903795	+	Silent	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	9	123903795	123903795	C	T	SNP	CNTRL	ENST00000238341	human	ensembl	74_37	+1	known	silent	c.2620	p.L874	1.000	superfamily_Prefoldin	pfam_Leu-rich_rpt,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	CNTRL	HGNC	ENSG00000119397	tier1	-	-	51	0	0.00	46	9	16.36
COL11A1	0	genome.wustl.edu	37	1	103379194	103379194	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	1	103379194	103379194	G	T	SNP	COL11A1	ENST00000358392	human	ensembl	74_37	-1	known	missense	c.4067	p.P1356Q	1.000	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A1	HGNC	ENSG00000060718	tier1	-	-	74	0	0.00	46	11	18.97
COL12A1	0	genome.wustl.edu	37	6	75890711	75890711	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	6	75890711	75890711	G	A	SNP	COL12A1	ENST00000322507	human	ensembl	74_37	-1	known	missense	c.2108	p.A703V	0.999	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799	tier1	-	-	50	0	0.00	43	8	15.69
COL17A1	0	genome.wustl.edu	37	10	105830296	105830296	+	Silent	SNP	G	G	C			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	10	105830296	105830296	G	C	SNP	COL17A1	ENST00000353479	human	ensembl	74_37	-1	known	silent	c.495	p.L165	1.000	NULL	pfam_Collagen	-	no_errors	COL17A1	HGNC	ENSG00000065618	tier1	-	-	70	0	0.00	66	14	17.50
COL19A1	0	genome.wustl.edu	37	6	70916656	70916656	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	6	70916656	70916656	G	T	SNP	COL19A1	ENST00000322773	human	ensembl	74_37	+1	known	missense	c.3275	p.G1092V	1.000	NULL	pfam_Collagen,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	-	no_errors	COL19A1	HGNC	ENSG00000082293	tier1	-	-	68	0	0.00	63	12	16.00
COL3A1	0	genome.wustl.edu	37	2	189861937	189861937	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	2	189861937	189861937	G	T	SNP	COL3A1	ENST00000304636	human	ensembl	74_37	+1	known	missense	c.1808	p.G603V	1.000	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_VWF_C,superfamily_Fibrinogen_a/b/g_C_dom,smart_VWF_C,smart_Fib_collagen_C,pfscan_VWF_C	-	no_errors	COL3A1	HGNC	ENSG00000168542	tier1	-	-	65	0	0.00	52	4	7.02
COL6A5	0	genome.wustl.edu	37	3	130188024	130188024	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	3	130188024	130188024	G	C	SNP	COL6A5	ENST00000265379	human	ensembl	74_37	+1	known	missense	c.7176	p.W2392C	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A5	HGNC	ENSG00000172752	tier1	-	-	60	0	0.00	43	8	15.09
COL6A5	0	genome.wustl.edu	37	3	130188259	130188259	+	Nonsense_Mutation	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	3	130188259	130188259	C	T	SNP	COL6A5	ENST00000265379	human	ensembl	74_37	+1	known	nonsense	c.7411	p.R2471*	1.000	smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A5	HGNC	ENSG00000172752	tier1	-	-	63	0	0.00	49	16	24.62
COLQ	0	genome.wustl.edu	37	3	15540090	15540090	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	3	15540090	15540090	G	T	SNP	COLQ	ENST00000383781	human	ensembl	74_37	-1	known	missense	c.5	p.T2K	0.000	NULL	pfam_Collagen,tigrfam_Myxo_disulph_rpt	-	no_errors	COLQ	HGNC	ENSG00000206561	tier1	-	-	45	0	0.00	19	3	13.64
CPA3	0	genome.wustl.edu	37	3	148603919	148603919	+	Missense_Mutation	SNP	C	C	G			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	3	148603919	148603919	C	G	SNP	CPA3	ENST00000296046	human	ensembl	74_37	+1	known	missense	c.1021	p.R341G	0.097	pfam_Peptidase_M14,smart_Peptidase_M14	pfam_Peptidase_M14,pfam_Prot_inh_M14A,superfamily_Prot_inh_propept,smart_Peptidase_M14,prints_Peptidase_M14	-	no_errors	CPA3	HGNC	ENSG00000163751	tier1	-	-	56	0	0.00	69	12	14.81
CREBRF	0	genome.wustl.edu	37	5	172550134	172550134	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	5	172550134	172550134	T	C	SNP	CREBRF	ENST00000540014	human	ensembl	74_37	+1	known	missense	c.1739	p.V580A	1.000	NULL	NULL	-	no_errors	CREBRF	HGNC	ENSG00000164463	tier1	-	-	24	0	0.00	24	8	25.00
CSMD1	0	genome.wustl.edu	37	8	2954438	2954438	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	8	2954438	2954438	G	T	SNP	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	nonsense	c.7074	p.Y2358*	0.950	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117				53	0	0.00	66	4	5.71
CTCFL	0	genome.wustl.edu	37	20	56083740	56083740	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	20	56083740	56083740	G	T	SNP	CTCFL	ENST00000423479	human	ensembl	74_37	-1	known	missense	c.1596	p.H532Q	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	CTCFL	HGNC	ENSG00000124092	tier1	-	-	73	0	0.00	72	4	5.26
CTNNA3	0	genome.wustl.edu	37	10	68040237	68040237	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	10	68040237	68040237	C	A	SNP	CTNNA3	ENST00000373744	human	ensembl	74_37	-1	known	missense	c.1875	p.M625I	1.000	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin,prints_Vinculin	-	no_errors	CTNNA3	HGNC	ENSG00000183230				44	0	0.00	30	2	6.25
CUL7	0	genome.wustl.edu	37	6	43016152	43016152	+	Silent	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	6	43016152	43016152	G	T	SNP	CUL7	ENST00000535468	human	ensembl	74_37	-1	known	silent	c.2233	p.R745	0.076	NULL	pfam_Cullin_N,pfam_CPH_domain,pfam_APC_su10/DOC_dom,superfamily_Galactose-bd-like,superfamily_Cullin_homology,superfamily_ARM-type_fold,smart_Cullin_neddylation_domain,pfscan_Cullin_homology	-	no_errors	CUL7	HGNC	ENSG00000044090				37	0	0.00	19	2	9.52
CXCL6	0	genome.wustl.edu	37	4	74702958	74702958	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	4	74702958	74702958	C	A	SNP	CXCL6	ENST00000226317	human	ensembl	74_37	+1	known	missense	c.281	p.P94Q	1.000	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom,prints_Chemokine_CXC	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom,prints_Chemokine_CXC	-	no_errors	CXCL6	HGNC	ENSG00000124875				27	0	0.00	16	2	11.11
CYP24A1	0	genome.wustl.edu	37	20	52775550	52775550	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	20	52775550	52775550	G	T	SNP	CYP24A1	ENST00000216862	human	ensembl	74_37	-1	known	missense	c.1103	p.A368E	1.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_CYP24A_mit,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450	-	no_errors	CYP24A1	HGNC	ENSG00000019186	tier1	-	-	51	0	0.00	63	4	5.97
CYP7B1	0	genome.wustl.edu	37	8	65536985	65536985	+	Silent	SNP	A	A	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	8	65536985	65536985	A	T	SNP	CYP7B1	ENST00000310193	human	ensembl	74_37	-1	known	silent	c.234	p.G78	0.998	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I,prints_Cyt_P450	-	no_errors	CYP7B1	HGNC	ENSG00000172817	tier1	-	-	64	0	0.00	56	9	13.85
DACT1	0	genome.wustl.edu	37	14	59112640	59112640	+	Frame_Shift_Del	DEL	G	G	-			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	14	59112640	59112640	G	-	DEL	DACT1	ENST00000335867	human	ensembl	74_37	+1	known	frame_shift_del	c.1299	p.L435fs	0.325	NULL	NULL	-	no_errors	DACT1	HGNC	ENSG00000165617	tier1			65	0	0.00	25	20	44.44
DACT1	0	genome.wustl.edu	37	14	59112641	59112641	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	14	59112641	59112641	C	A	SNP	DACT1	ENST00000335867	human	ensembl	74_37	+1	known	missense	c.1300	p.P434T	0.319	NULL	NULL	-	no_errors	DACT1	HGNC	ENSG00000165617	tier1	-	-	64	0	0.00	24	21	46.67
DCHS2	0	genome.wustl.edu	37	4	155412323	155412323	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	4	155412323	155412323	G	T	SNP	DCHS2	ENST00000339452	human	ensembl	74_37	-1	known	missense	c.185	p.S62Y	0.283	NULL	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	DCHS2	HGNC	ENSG00000197410	tier1	-	-	57	0	0.00	20	4	16.67
DFNB31	0	genome.wustl.edu	37	9	117240860	117240860	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	9	117240860	117240860	G	T	SNP	DFNB31	ENST00000362057	human	ensembl	74_37	-1	known	missense	c.810	p.H270Q	1.000	superfamily_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	DFNB31	HGNC	ENSG00000095397				46	0	0.00	38	4	9.52
DHODH	0	genome.wustl.edu	37	16	72055078	72055078	+	Frame_Shift_Del	DEL	G	G	-			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	16	72055078	72055078	G	-	DEL	DHODH	ENST00000219240	human	ensembl	74_37	+1	known	frame_shift_del	c.573	p.E192fs	0.284	pfam_Dihydroorotate_DH_1_2,pirsf_Dihydroorotate_DH_1_2,tigrfam_Dihydroorotate_DH_2	pfam_Dihydroorotate_DH_1_2,pirsf_Dihydroorotate_DH_1_2,tigrfam_Dihydroorotate_DH_2	-	no_errors	DHODH	HGNC	ENSG00000102967	tier1			64	0	0.00	41	13	24.07
DHX57	0	genome.wustl.edu	37	2	39088678	39088678	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	2	39088678	39088678	C	T	SNP	DHX57	ENST00000295373	human	ensembl	74_37	-1	known	missense	c.874	p.E292K	0.006	pfam_RWD-domain,superfamily_UBQ-conjugating_enzyme/RWD	pfam_RWD-domain,pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Znf_CCCH,superfamily_P-loop_NTPase,superfamily_UBA-like,superfamily_UBQ-conjugating_enzyme/RWD,smart_Znf_CCCH,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX57	HGNC	ENSG00000163214	tier1	-	-	32	0	0.00	30	7	18.92
DMBT1	0	genome.wustl.edu	37	10	124396806	124396806	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	10	124396806	124396806	C	T	SNP	DMBT1	ENST00000338354	human	ensembl	74_37	+1	known	missense	c.6533	p.S2178L	0.006	pfam_ZP_dom,smart_ZP_dom,pfscan_ZP_dom	pfam_SRCR,pfam_CUB_dom,pfam_ZP_dom,superfamily_Srcr_rcpt-rel,superfamily_CUB_dom,smart_Srcr_rcpt-rel,smart_CUB_dom,smart_ZP_dom,pfscan_CUB_dom,pfscan_SRCR,pfscan_ZP_dom,prints_SRCR	-	no_errors	DMBT1	HGNC	ENSG00000187908	tier1	-	-	38	0	0.00	23	5	17.86
DNAI2	0	genome.wustl.edu	37	17	72301522	72301522	+	Silent	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	17	72301522	72301522	C	T	SNP	DNAI2	ENST00000311014	human	ensembl	74_37	+1	known	silent	c.1152	p.G384	0.007	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DNAI2	HGNC	ENSG00000171595	tier1	-	-	106	0	0.00	40	16	28.57
DNMBP	0	genome.wustl.edu	37	10	101658499	101658499	+	Splice_Site	SNP	C	C	G			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	10	101658499	101658499	C	G	SNP	DNMBP	ENST00000342239	human	ensembl	74_37	-1	known	splice_site	c.2720+1	e7+1	1.000	-	-	-	no_errors	DNMBP	HGNC	ENSG00000107554	tier1	-	-	42	0	0.00	30	5	14.29
DST	0	genome.wustl.edu	37	6	56473870	56473870	+	Silent	SNP	T	T	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	6	56473870	56473870	T	A	SNP	DST	ENST00000370754	human	ensembl	74_37	-1	known	silent	c.5457	p.T1819	0.000	superfamily_ABC1_TM_dom	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	DST	HGNC	ENSG00000151914	tier1	-	-	36	0	0.00	18	20	52.63
DUSP27	0	genome.wustl.edu	37	1	167096823	167096823	+	Missense_Mutation	SNP	A	A	G			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	1	167096823	167096823	A	G	SNP	DUSP27	ENST00000271385	human	ensembl	74_37	+1	known	missense	c.2455	p.T819A	1.000	NULL	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_Atypical_DUSP,prints_Atypical_DUSP_famA	-	no_errors	DUSP27	HGNC	ENSG00000198842	tier1	-	-	43	0	0.00	27	13	32.50
DYNC1I2	0	genome.wustl.edu	37	2	172584463	172584463	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	2	172584463	172584463	G	A	SNP	DYNC1I2	ENST00000397119	human	ensembl	74_37	+1	known	missense	c.1129	p.A377T	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_Dynein_IC_1/2,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DYNC1I2	HGNC	ENSG00000077380	tier1	-	-	49	0	0.00	46	15	24.59
DYNC2H1	0	genome.wustl.edu	37	11	103055753	103055753	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	11	103055753	103055753	G	A	SNP	DYNC2H1	ENST00000398093	human	ensembl	74_37	+1	known	missense	c.6606	p.M2202I	1.000	superfamily_P-loop_NTPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DYNC2H1	HGNC	ENSG00000187240	tier1	-	-	65	0	0.00	59	22	27.16
EFNA5	0	genome.wustl.edu	37	5	106763018	106763018	+	Silent	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	5	106763018	106763018	G	A	SNP	EFNA5	ENST00000333274	human	ensembl	74_37	-1	known	silent	c.318	p.H106	1.000	pfam_Ephrin,superfamily_Cupredoxin	pfam_Ephrin,superfamily_Cupredoxin,prints_Ephrin	-	no_errors	EFNA5	HGNC	ENSG00000184349	tier1	-	-	68	0	0.00	51	13	20.31
EGF	0	genome.wustl.edu	37	4	110897167	110897167	+	Splice_Site	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	4	110897167	110897167	G	T	SNP	EGF	ENST00000265171	human	ensembl	74_37	+1	known	splice_site	c.1830-1	e13-1	1.000	-	-	-	no_errors	EGF	HGNC	ENSG00000138798	tier1	-	-	31	0	0.00	37	4	9.76
ENGASE	0	genome.wustl.edu	37	17	77082217	77082217	+	Missense_Mutation	SNP	C	C	G			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	17	77082217	77082217	C	G	SNP	ENGASE	ENST00000579016	human	ensembl	74_37	+1	known	missense	c.2018	p.S673C	0.042	NULL	pfam_Glyco_hydro_85,pfscan_BRCT_dom	-	no_errors	ENGASE	HGNC	ENSG00000167280	tier1	-	-	50	0	0.00	36	8	18.18
ENSG00000221544	0	genome.wustl.edu	37	6	105629061	105629068	+	RNA	DEL	TATATATA	TATATATA	-			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	TATATATA	TATATATA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	6	105629061	105629068	TATATATA	0	DEL	ENSG00000221544	ENST00000408617	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.004:0.005:0.007:0.007:0.007:0.007:0.007:0.002	-	-	-	no_errors	AL359709.1	Clone_based_ensembl_gene	ENSG00000221544				9	0	0.00	16	3	15.79
ENSG00000233858	0	genome.wustl.edu	37	8	49503246	49503246	+	RNA	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	8	49503246	49503246	G	T	SNP	ENSG00000233858	ENST00000430626	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC026904.1	Clone_based_vega_gene	ENSG00000233858	tier1	-	-	36	0	0.00	31	4	11.43
ENSG00000240291	0	genome.wustl.edu	37	10	18830178	18830178	+	Splice_Site	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	10	18830178	18830178	C	T	SNP	ENSG00000240291	ENST00000425669	human	ensembl	74_37	-1	known	splice_site	c.NULL	NULL	0.002	-	-	-	no_errors	RP11-499P20.2	Clone_based_vega_gene	ENSG00000240291	tier1	-	-	38	0	0.00	43	9	17.31
ENSG00000255622	0	genome.wustl.edu	37	5	140537151	140537151	+	Silent	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	5	140537151	140537151	G	A	SNP	ENSG00000255622	ENST00000539533	human	ensembl	74_37	+1	known	silent	c.1575	p.L525	0.937	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB17	Uniprot_gn	ENSG00000255622	tier1	-	-	198	0	0.00	122	24	16.44
EP300	0	genome.wustl.edu	37	22	41564862	41564862	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	22	41564862	41564862	C	A	SNP	EP300	ENST00000263253	human	ensembl	74_37	+1	known	missense	c.4163	p.P1388H	1.000	pfam_Histone_H3-K56_AcTrfase_RTT109	pfam_Histone_H3-K56_AcTrfase_RTT109,pfam_Nuc_rcpt_coact_CREBbp,pfam_KIX_dom,pfam_DUF902_CREBbp,pfam_Znf_TAZ,pfam_Bromodomain,pfam_Znf_ZZ,superfamily_Bromodomain,superfamily_Znf_TAZ,superfamily_KIX_dom,superfamily_Nuc_rcpt_coact,superfamily_Znf_FYVE_PHD,smart_Znf_TAZ,smart_Bromodomain,smart_Znf_ZZ,pfscan_KIX_dom,pfscan_Znf_TAZ,pfscan_Znf_ZZ,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	EP300	HGNC	ENSG00000100393	tier1	-	-	61	0	0.00	47	4	7.84
EPHA3	0	genome.wustl.edu	37	3	89462301	89462301	+	Silent	SNP	A	A	G			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	3	89462301	89462301	A	G	SNP	EPHA3	ENST00000336596	human	ensembl	74_37	+1	known	silent	c.1773	p.P591	1.000	pirsf_Tyr_kinase_ephrin_rcpt	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_2,pfam_SAM_type1,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA3	HGNC	ENSG00000044524				68	0	0.00	53	3	5.36
EPHA4	0	genome.wustl.edu	37	2	222365784	222365784	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	2	222365784	222365784	C	T	SNP	EPHA4	ENST00000281821	human	ensembl	74_37	-1	known	missense	c.932	p.R311Q	1.000	pirsf_Tyr_kinase_ephrin_rcpt,superfamily_Growth_fac_rcpt_N_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_2,pfam_SAM_type1,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHA4	HGNC	ENSG00000116106				60	0	0.00	36	2	5.26
ERMP1	0	genome.wustl.edu	37	9	5787517	5787517	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	9	5787517	5787517	G	T	SNP	ERMP1	ENST00000489219	human	ensembl	74_37	-1	known	missense	c.2512	p.P838T	0.964	NULL	pfam_Peptidase_M28,pfam_Peptidase_M20	-	no_errors	ERMP1	HGNC	ENSG00000099219				60	0	0.00	62	4	6.06
ESYT2	0	genome.wustl.edu	37	7	158527118	158527118	+	Silent	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	7	158527118	158527118	G	T	SNP	ESYT2	ENST00000251527	human	ensembl	74_37	-1	known	silent	c.2631	p.T877	1.000	superfamily_C2_dom,smart_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	ESYT2	HGNC	ENSG00000117868	tier1	-	-	73	0	0.00	45	4	8.16
FAM180A	0	genome.wustl.edu	37	7	135421860	135421860	+	Missense_Mutation	SNP	T	T	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	7	135421860	135421860	T	A	SNP	FAM180A	ENST00000338588	human	ensembl	74_37	-1	known	missense	c.164	p.E55V	0.998	NULL	NULL	-	no_errors	FAM180A	HGNC	ENSG00000189320				43	0	0.00	30	2	6.25
FAM230A	0	genome.wustl.edu	37	22	20709402	20709402	+	Silent	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	22	20709402	20709402	C	T	SNP	FAM230A	ENST00000434783	human	ensembl	74_37	+1	known	silent	c.1134	p.A378	0.000	superfamily_Kinase-like_dom	pfam_Ret-finger_pr-like_3_antisense,superfamily_Kinase-like_dom	-	no_errors	FAM230A	HGNC	ENSG00000188280	tier1	-	-	139	0	0.00	51	19	27.14
FBXO15	0	genome.wustl.edu	37	18	71803093	71803093	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	18	71803093	71803093	G	A	SNP	FBXO15	ENST00000419743	human	ensembl	74_37	-1	known	missense	c.236	p.S79L	1.000	pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom	pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO15	HGNC	ENSG00000141665	tier1	-	-	29	0	0.00	13	4	23.53
FCHO2	0	genome.wustl.edu	37	5	72285328	72285328	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	5	72285328	72285328	G	C	SNP	FCHO2	ENST00000341845	human	ensembl	74_37	+1	known	missense	c.200	p.G67A	1.000	pfam_FCH_dom,smart_FCH_dom,pfscan_FCH_dom	pfam_Muniscin_C-term_mu_dom,pfam_FCH_dom,smart_FCH_dom,pfscan_FCH_dom	-	no_errors	FCHO2	HGNC	ENSG00000157107	tier1	-	-	42	0	0.00	45	7	13.46
FGL2	0	genome.wustl.edu	37	7	76825667	76825667	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	7	76825667	76825667	G	T	SNP	FGL2	ENST00000248598	human	ensembl	74_37	-1	known	missense	c.1249	p.H417N	0.975	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	-	no_errors	FGL2	HGNC	ENSG00000127951	tier1	-	-	53	0	0.00	55	4	6.78
FLJ46361	0	genome.wustl.edu	37	10	124516322	124516322	+	RNA	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	10	124516322	124516322	C	T	SNP	FLJ46361	ENST00000439464	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.852	-	-	-	no_errors	RP11-318C4.2	Clone_based_vega_gene	ENSG00000176584	tier1	-	-	56	0	0.00	33	9	21.43
FLNB	0	genome.wustl.edu	37	3	58145286	58145286	+	Silent	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	3	58145286	58145286	G	T	SNP	FLNB	ENST00000295956	human	ensembl	74_37	+1	known	silent	c.6894	p.S2298	0.957	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNB	HGNC	ENSG00000136068				54	0	0.00	36	2	5.26
FMN1	0	genome.wustl.edu	37	15	33359062	33359062	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	15	33359062	33359062	G	T	SNP	FMN1	ENST00000334528	human	ensembl	74_37	-1	known	missense	c.1024	p.L342M	1.000	NULL	pfam_FH2_Formin,smart_FH2_Formin,prints_Formin_Cappuccino_subfam	-	no_errors	FMN1	HGNC	ENSG00000248905				36	0	0.00	36	3	7.69
FMNL3	0	genome.wustl.edu	37	12	50044990	50044990	+	Silent	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	12	50044990	50044990	G	T	SNP	FMNL3	ENST00000293590	human	ensembl	74_37	-1	known	silent	c.1758	p.G586	1.000	pfam_FH2_Formin,smart_FH2_Formin	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	FMNL3	HGNC	ENSG00000161791				80	0	0.00	75	4	5.00
FOXJ2	0	genome.wustl.edu	37	12	8201390	8201390	+	Silent	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	12	8201390	8201390	C	T	SNP	FOXJ2	ENST00000162391	human	ensembl	74_37	+1	known	silent	c.1323	p.F441	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXJ2	HGNC	ENSG00000065970	tier1	-	-	29	0	0.00	29	8	21.62
FOXN4	0	genome.wustl.edu	37	12	109724463	109724463	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	12	109724463	109724463	G	T	SNP	FOXN4	ENST00000299162	human	ensembl	74_37	-1	known	missense	c.683	p.P228H	1.000	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXN4	HGNC	ENSG00000139445	tier1	-	-	32	0	0.00	18	3	14.29
FOXP1	0	genome.wustl.edu	37	3	71015091	71015091	+	Silent	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	3	71015091	71015091	G	T	SNP	FOXP1	ENST00000318789	human	ensembl	74_37	-1	known	silent	c.1839	p.T613	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,prints_TF_fork_head,pfscan_TF_fork_head	-	no_errors	FOXP1	HGNC	ENSG00000114861				62	0	0.00	32	4	11.11
FRG1B	0	genome.wustl.edu	37	20	29612021	29612021	+	RNA	SNP	C	C	G			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	20	29612021	29612021	C	G	SNP	FRG1B	ENST00000468180	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FRG1B	HGNC	ENSG00000149531	tier1	-	-	123	0	0.00	73	15	16.67
FSD1L	0	genome.wustl.edu	37	9	108296830	108296830	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	9	108296830	108296830	G	T	SNP	FSD1L	ENST00000539376	human	ensembl	74_37	+1	known	missense	c.641	p.R214I	1.000	superfamily_ConA-like_lec_gl_sf,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,prints_Butyrophylin	-	no_errors	FSD1L	HGNC	ENSG00000106701	tier1	-	-	32	0	0.00	33	4	10.81
FSHR	0	genome.wustl.edu	37	2	49381432	49381432	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	2	49381432	49381432	G	A	SNP	FSHR	ENST00000406846	human	ensembl	74_37	-1	known	missense	c.125	p.S42F	0.379	pfam_LRR-contain_N,smart_LRR-contain_N	pfam_GPCR_Rhodpsn,pfam_GnHR_TM,pfam_LRR-contain_N,pfam_Leu-rich_rpt,smart_LRR-contain_N,pfscan_GPCR_Rhodpsn_7TM,prints_FSH_rcpt,prints_Gphrmn_rcpt_fam,prints_GPCR_Rhodpsn,prints_TSH_rcpt	-	no_errors	FSHR	HGNC	ENSG00000170820	tier1	-	-	54	0	0.00	21	4	15.38
FYCO1	0	genome.wustl.edu	37	3	46021323	46021323	+	Splice_Site	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	3	46021323	46021323	C	T	SNP	FYCO1	ENST00000535325	human	ensembl	74_37	-1	known	splice_site	c.163-1	e3-1	1.000	-	-	-	no_errors	FYCO1	HGNC	ENSG00000163820	tier1	-	-	39	0	0.00	42	4	8.70
GABRA1	0	genome.wustl.edu	37	5	161317974	161317974	+	Nonsense_Mutation	SNP	C	C	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	5	161317974	161317974	C	A	SNP	GABRA1	ENST00000023897	human	ensembl	74_37	+1	known	nonsense	c.774	p.Y258*	0.992	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAa_rcpt,prints_GABAA_rcpt,prints_GABBAa1_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRA1	HGNC	ENSG00000022355	tier1	-	-	46	0	0.00	28	11	28.21
GBP1	0	genome.wustl.edu	37	1	89520389	89520389	+	Missense_Mutation	SNP	C	C	G			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	1	89520389	89520389	C	G	SNP	GBP1	ENST00000370473	human	ensembl	74_37	-1	known	missense	c.1641	p.E547D	0.000	pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C	pfam_Guanylate-bd_C,pfam_Guanylate-bd_N,superfamily_Guanylate-bd_C,superfamily_P-loop_NTPase	-	no_errors	GBP1	HGNC	ENSG00000117228	tier1	-	-	31	0	0.00	21	9	30.00
GBP1	0	genome.wustl.edu	37	1	89520993	89520993	+	RNA	SNP	C	C	G			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	1	89520993	89520993	C	G	SNP	GBP1	ENST00000479889	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GBP1	HGNC	ENSG00000117228	tier1	-	-	67	0	0.00	62	17	21.52
GIPC1	0	genome.wustl.edu	37	19	14589343	14589343	+	Missense_Mutation	SNP	T	T	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	19	14589343	14589343	T	A	SNP	GIPC1	ENST00000345425	human	ensembl	74_37	-1	known	missense	c.887	p.N296I	1.000	pirsf_UCP038083_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pirsf_UCP038083_PDZ,pfscan_PDZ	-	no_errors	GIPC1	HGNC	ENSG00000123159	tier1	-	-	31	0	0.00	30	9	23.08
GNAO1	0	genome.wustl.edu	37	16	56370660	56370660	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	16	56370660	56370660	G	T	SNP	GNAO1	ENST00000262493	human	ensembl	74_37	+1	known	missense	c.611	p.G204V	1.000	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su,prints_Gprotein_alpha_I	-	no_errors	GNAO1	HGNC	ENSG00000087258				53	0	0.00	32	4	11.11
GPAT2	0	genome.wustl.edu	37	2	96688929	96688929	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	2	96688929	96688929	G	A	SNP	GPAT2	ENST00000359548	human	ensembl	74_37	-1	known	missense	c.2074	p.R692C	1.000	NULL	smart_Plipid/glycerol_acylTrfase	-	no_errors	GPAT2	HGNC	ENSG00000186281	tier1	rs201647131	-	37	0	0.00	23	6	20.69
GPR112	0	genome.wustl.edu	37	X	135429986	135429987	+	Frame_Shift_Ins	INS	-	-	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	X	135429986	135429987	-	T	INS	GPR112	ENST00000370652	human	ensembl	74_37	+1	known	frame_shift_ins	c.4121_4122	p.L1376fs	0.029:0.014	NULL	pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	-	no_errors	GPR112	HGNC	ENSG00000156920	tier1			39	0	0.00	37	11	22.92
GPR112	0	genome.wustl.edu	37	X	135430355	135430355	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	X	135430355	135430355	T	C	SNP	GPR112	ENST00000370652	human	ensembl	74_37	+1	known	missense	c.4490	p.M1497T	0.000	NULL	pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	-	no_errors	GPR112	HGNC	ENSG00000156920	tier1	-	-	53	0	0.00	37	7	15.91
GPR179	0	genome.wustl.edu	37	17	36484015	36484015	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	17	36484015	36484015	C	T	SNP	GPR179	ENST00000342292	human	ensembl	74_37	-1	known	missense	c.5437	p.E1813K	0.073	NULL	pfam_GPCR_3_C,superfamily_Growth_fac_rcpt_N_dom,pfscan_GPCR_3_C	-	no_errors	GPR179	HGNC	ENSG00000188888				11	0	0.00	11	2	15.38
GPR180	0	genome.wustl.edu	37	13	95257761	95257761	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	13	95257761	95257761	G	T	SNP	GPR180	ENST00000376958	human	ensembl	74_37	+1	known	missense	c.262	p.G88C	0.005	NULL	pfam_Intimal_thickness-rel_rcpt,pfam_TM_rcpt_euk	-	no_errors	GPR180	HGNC	ENSG00000152749	tier1	-	-	43	0	0.00	38	4	9.52
GSTCD	0	genome.wustl.edu	37	4	106640346	106640346	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	4	106640346	106640346	C	T	SNP	GSTCD	ENST00000360505	human	ensembl	74_37	+1	known	missense	c.556	p.P186S	1.000	superfamily_Glutathione-S-Trfase_C-like	pfam_rRNA_ssu_MeTfrase_G,pfam_Small_mtfrase_dom,superfamily_Glutathione-S-Trfase_C-like	-	no_errors	GSTCD	HGNC	ENSG00000138780	tier1	-	-	41	0	0.00	54	4	6.90
GTF2H5	0	genome.wustl.edu	37	6	158613034	158613034	+	Silent	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	6	158613034	158613034	C	T	SNP	GTF2H5	ENST00000607778	human	ensembl	74_37	+1	known	silent	c.61	p.L21	1.000	pfam_TFIIH_TTDA/Tfb5,superfamily_TFIIH_TTDA/Tfb5	pfam_TFIIH_TTDA/Tfb5,superfamily_TFIIH_TTDA/Tfb5	-	no_errors	GTF2H5	HGNC	ENSG00000272047	tier1	-	-	57	0	0.00	55	4	6.78
GTF2IRD1	0	genome.wustl.edu	37	7	74016708	74016708	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	7	74016708	74016708	T	C	SNP	GTF2IRD1	ENST00000265755	human	ensembl	74_37	+1	known	missense	c.2828	p.M943T	1.000	NULL	pfam_GTF2I,superfamily_GTF2I,pirsf_TF_II-I,pfscan_GTF2I	-	no_errors	GTF2IRD1	HGNC	ENSG00000006704	tier1	-	-	76	0	0.00	72	4	5.26
GTF3C2	0	genome.wustl.edu	37	2	27566340	27566340	+	Nonsense_Mutation	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	2	27566340	27566340	G	A	SNP	GTF3C2	ENST00000264720	human	ensembl	74_37	-1	known	nonsense	c.82	p.Q28*	0.998	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	GTF3C2	HGNC	ENSG00000115207	tier1	-	-	48	0	0.00	26	5	15.62
GZF1	0	genome.wustl.edu	37	20	23349433	23349433	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	20	23349433	23349433	G	T	SNP	GZF1	ENST00000338121	human	ensembl	74_37	+1	known	missense	c.1494	p.K498N	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	GZF1	HGNC	ENSG00000125812				65	0	0.00	66	4	5.71
HCFC1	0	genome.wustl.edu	37	X	153219809	153219809	+	Silent	SNP	A	A	G			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	X	153219809	153219809	A	G	SNP	HCFC1	ENST00000310441	human	ensembl	74_37	-1	known	silent	c.4041	p.G1347	0.018	NULL	pfam_Kelch_2,pfam_Kelch_1,superfamily_Fibronectin_type3,smart_Fibronectin_type3	-	no_errors	HCFC1	HGNC	ENSG00000172534	tier1	-	-	45	0	0.00	18	5	21.74
HCN3	0	genome.wustl.edu	37	1	155258694	155258694	+	RNA	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	1	155258694	155258694	G	A	SNP	HCN3	ENST00000492035	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	HCN3	HGNC	ENSG00000143630	tier1	-	-	60	0	0.00	36	10	21.74
HEMGN	0	genome.wustl.edu	37	9	100692387	100692387	+	Silent	SNP	T	T	C			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	9	100692387	100692387	T	C	SNP	HEMGN	ENST00000259456	human	ensembl	74_37	-1	known	silent	c.1290	p.T430	0.869	NULL	NULL	-	no_errors	HEMGN	HGNC	ENSG00000136929	tier1	-	-	48	0	0.00	46	4	8.00
HERC3	0	genome.wustl.edu	37	4	89608381	89608381	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	4	89608381	89608381	G	T	SNP	HERC3	ENST00000264345	human	ensembl	74_37	+1	known	missense	c.2588	p.S863I	1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_Reg_chr_condens,pfam_HECT,superfamily_HECT,superfamily_RCC1/BLIP-II,smart_HECT,pfscan_HECT,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	HERC3	HGNC	ENSG00000138641	tier1	-	-	69	0	0.00	63	4	5.97
HES1	0	genome.wustl.edu	37	3	193854799	193854799	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	3	193854799	193854799	T	C	SNP	HES1	ENST00000232424	human	ensembl	74_37	+1	known	missense	c.254	p.V85A	1.000	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	pfam_Orange,pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,smart_Orange_subgr,pfscan_Orange,pfscan_bHLH_dom	-	no_errors	HES1	HGNC	ENSG00000114315	tier1	-	-	56	0	0.00	23	12	34.29
HMGXB4	0	genome.wustl.edu	37	22	35659857	35659857	+	Nonsense_Mutation	SNP	C	C	G			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	22	35659857	35659857	C	G	SNP	HMGXB4	ENST00000216106	human	ensembl	74_37	+1	known	nonsense	c.249	p.Y83*	1.000	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	HMGXB4	HGNC	ENSG00000100281	tier1	-	-	53	0	0.00	51	14	21.54
HRCT1	0	genome.wustl.edu	37	9	35906348	35906350	+	In_Frame_Del	DEL	CTG	CTG	-			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	CTG	CTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	9	35906348	35906350	CTG	-	DEL	HRCT1	ENST00000354323	human	ensembl	74_37	+1	known	in_frame_del	c.64_66	p.L25in_frame_del	0.168:0.493:0.516	NULL	NULL	-	no_errors	HRCT1	HGNC	ENSG00000196196	tier1			38	0	0.00	35	4	10.26
HSD17B13	0	genome.wustl.edu	37	4	88231439	88231439	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	4	88231439	88231439	C	T	SNP	HSD17B13	ENST00000328546	human	ensembl	74_37	-1	known	missense	c.768	p.M256I	1.000	NULL	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR	-	no_errors	HSD17B13	HGNC	ENSG00000170509	tier1	-	-	122	0	0.00	85	24	22.02
IBSP	0	genome.wustl.edu	37	4	88732897	88732897	+	Silent	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	4	88732897	88732897	C	T	SNP	IBSP	ENST00000226284	human	ensembl	74_37	+1	known	silent	c.789	p.Y263	0.672	pfam_BSP_II	pfam_BSP_II	-	no_errors	IBSP	HGNC	ENSG00000029559				64	0	0.00	75	4	5.06
INPP5E	0	genome.wustl.edu	37	9	139327463	139327463	+	Silent	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	9	139327463	139327463	G	T	SNP	INPP5E	ENST00000371712	human	ensembl	74_37	-1	known	silent	c.1224	p.G408	0.769	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_IPPc	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_IPPc	-	no_errors	INPP5E	HGNC	ENSG00000148384				48	0	0.00	30	4	11.76
INSR	0	genome.wustl.edu	37	19	7172394	7172394	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	19	7172394	7172394	G	T	SNP	INSR	ENST00000302850	human	ensembl	74_37	-1	known	nonsense	c.1175	p.S392*	1.000	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_EGF_rcpt_L	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_Fibronectin_type3,smart_Furin_repeat,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom	-	no_errors	INSR	HGNC	ENSG00000171105				52	0	0.00	46	3	6.12
INTS7	0	genome.wustl.edu	37	1	212149950	212149950	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	1	212149950	212149950	G	T	SNP	INTS7	ENST00000440600	human	ensembl	74_37	-1	known	missense	c.1435	p.R479S	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	INTS7	HGNC	ENSG00000143493	tier1	-	-	45	0	0.00	39	4	9.30
IQSEC2	0	genome.wustl.edu	37	X	53268414	53268414	+	Silent	SNP	G	G	C			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	X	53268414	53268414	G	C	SNP	IQSEC2	ENST00000396435	human	ensembl	74_37	-1	known	silent	c.3078	p.P1026	0.970	smart_Pleckstrin_homology	pfam_Sec7_dom,superfamily_Sec7_dom,superfamily_P-loop_NTPase,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_IQ_motif_EF-hand-BS,pfscan_Sec7_dom	-	no_errors	IQSEC2	HGNC	ENSG00000124313	tier1	-	-	104	0	0.00	71	22	23.66
ITGAV	0	genome.wustl.edu	37	2	187495554	187495554	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	2	187495554	187495554	G	A	SNP	ITGAV	ENST00000261023	human	ensembl	74_37	+1	known	missense	c.554	p.C185Y	1.000	NULL	pfam_Integrin_alpha-2,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGAV	HGNC	ENSG00000138448	tier1	-	-	35	0	0.00	24	10	29.41
IWS1	0	genome.wustl.edu	37	2	128262391	128262391	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	2	128262391	128262391	G	T	SNP	IWS1	ENST00000295321	human	ensembl	74_37	-1	known	missense	c.1088	p.S363Y	1.000	NULL	pfam_TFIIS_N,superfamily_TFIIS_N	-	no_errors	IWS1	HGNC	ENSG00000163166				48	0	0.00	42	4	8.70
KCNH2	0	genome.wustl.edu	37	7	150642567	150642567	+	Silent	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	7	150642567	150642567	C	T	SNP	KCNH2	ENST00000262186	human	ensembl	74_37	-1	known	silent	c.3366	p.P1122	0.020	NULL	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_cNMP-bd_dom,pfam_PAS_fold,pfam_PAS_fold_3,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH2	HGNC	ENSG00000055118	tier1	-	-	55	0	0.00	29	7	19.44
KCNMA1	0	genome.wustl.edu	37	10	78778787	78778787	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	10	78778787	78778787	C	A	SNP	KCNMA1	ENST00000406533	human	ensembl	74_37	-1	known	missense	c.2011	p.A671S	1.000	NULL	pfam_K_chnl_Ca-activ_BK_asu,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_RCK_N,prints_K_chnl_Ca-activ_BK_asu,prints_K_chnl	-	no_errors	KCNMA1	HGNC	ENSG00000156113	tier1	-	-	52	0	0.00	49	11	18.33
KCNU1	0	genome.wustl.edu	37	8	36671820	36671820	+	Silent	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	8	36671820	36671820	C	T	SNP	KCNU1	ENST00000399881	human	ensembl	74_37	+1	known	silent	c.828	p.T276	0.972	pfam_2pore_dom_K_chnl_dom	pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_Ca-activ_BK_asu	-	no_errors	KCNU1	HGNC	ENSG00000215262	tier1	-	-	74	0	0.00	73	5	6.41
KCTD3	0	genome.wustl.edu	37	1	215793669	215793669	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	1	215793669	215793669	G	C	SNP	KCTD3	ENST00000259154	human	ensembl	74_37	+1	known	missense	c.2157	p.L719F	0.000	NULL	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,superfamily_WD40_repeat_dom,smart_BTB/POZ-like,smart_WD40_repeat,pfscan_BTB/POZ-like	-	no_errors	KCTD3	HGNC	ENSG00000136636	tier1	-	-	42	0	0.00	38	6	13.64
KDM3B	0	genome.wustl.edu	37	5	137727938	137727939	+	Frame_Shift_Ins	INS	-	-	C			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	5	137727938	137727939	-	C	INS	KDM3B	ENST00000314358	human	ensembl	74_37	+1	known	frame_shift_ins	c.2617_2618	p.L875fs	0.986:0.996	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	KDM3B	HGNC	ENSG00000120733	tier1			25	0	0.00	19	2	9.52
KIAA1257	0	genome.wustl.edu	37	3	128711907	128711907	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	3	128711907	128711907	G	T	SNP	KIAA1257	ENST00000265068	human	ensembl	74_37	-1	known	missense	c.241	p.L81M	0.392	NULL	NULL	-	no_errors	KIAA1257	HGNC	ENSG00000114656	tier1	-	-	30	0	0.00	22	4	15.38
KIAA1462	0	genome.wustl.edu	37	10	30315887	30315887	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	10	30315887	30315887	G	T	SNP	KIAA1462	ENST00000375377	human	ensembl	74_37	-1	known	missense	c.3190	p.L1064I	0.000	NULL	NULL	-	no_errors	KIAA1462	HGNC	ENSG00000165757	tier1	-	-	32	0	0.00	22	4	15.38
KIF22	0	genome.wustl.edu	37	16	29811283	29811283	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	16	29811283	29811283	G	T	SNP	KIF22	ENST00000160827	human	ensembl	74_37	+1	known	missense	c.1194	p.E398D	0.996	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,superfamily_RuvA_2-like,smart_Kinesin_motor_dom,smart_Hlx-hairpin-Hlx_DNA-bd_motif,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF22	HGNC	ENSG00000079616	tier1	-	-	40	0	0.00	37	4	9.76
KIF23	0	genome.wustl.edu	37	15	69733338	69733338	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	15	69733338	69733338	G	T	SNP	KIF23	ENST00000260363	human	ensembl	74_37	+1	known	missense	c.2299	p.G767W	1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF23	HGNC	ENSG00000137807	tier1	-	-	30	0	0.00	24	4	14.29
KMT2D	0	genome.wustl.edu	37	12	49422901	49422901	+	Nonsense_Mutation	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	12	49422901	49422901	G	A	SNP	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	nonsense	c.14194	p.Q4732*	1.000	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548	tier1	-	-	61	0	0.00	21	5	19.23
KMT2D	0	genome.wustl.edu	37	12	49422902	49422902	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	12	49422902	49422902	C	A	SNP	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	missense	c.14193	p.E4731D	1.000	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548	tier1	-	-	61	0	0.00	21	5	19.23
KRT222	0	genome.wustl.edu	37	17	38821286	38821286	+	Missense_Mutation	SNP	C	C	G			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	17	38821286	38821286	C	G	SNP	KRT222	ENST00000394052	human	ensembl	74_37	-1	known	missense	c.66	p.Q22H	1.000	pfam_IF	pfam_IF,prints_Keratin_I	-	no_errors	KRT222	HGNC	ENSG00000213424				41	0	0.00	34	3	8.11
LAMC3	0	genome.wustl.edu	37	9	133948140	133948140	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	9	133948140	133948140	G	T	SNP	LAMC3	ENST00000361069	human	ensembl	74_37	+1	known	missense	c.3335	p.C1112F	0.995	NULL	pfam_EGF_laminin,pfam_Laminin_N,pfam_Laminin_B_type_IV,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMC3	HGNC	ENSG00000050555	tier1	-	-	46	0	0.00	31	9	22.50
LCN8	0	genome.wustl.edu	37	9	139650774	139650774	+	RNA	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	9	139650774	139650774	G	A	SNP	LCN8	ENST00000482893	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.163	-	-	-	no_errors	LCN8	HGNC	ENSG00000204001	tier1	-	-	182	0	0.00	148	8	5.13
LETMD1	0	genome.wustl.edu	37	12	51450147	51450147	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	12	51450147	51450147	G	T	SNP	LETMD1	ENST00000550100	human	ensembl	74_37	+1	known	missense	c.289	p.G97C	0.987	NULL	NULL	-	no_errors	LETMD1	HGNC	ENSG00000050426	tier1	-	-	28	0	0.00	24	4	14.29
LILRA2	0	genome.wustl.edu	37	19	55086220	55086220	+	Silent	SNP	C	C	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	19	55086220	55086220	C	A	SNP	LILRA2	ENST00000251377	human	ensembl	74_37	+1	known	silent	c.375	p.L125	0.305	pirsf_A1B_glyco/leuk_Ig-like_rcpt	smart_Ig_sub,smart_Ig_sub2,pirsf_A1B_glyco/leuk_Ig-like_rcpt,pfscan_Ig-like_dom	-	no_errors	LILRA2	HGNC	ENSG00000239998	tier1	-	-	265	0	0.00	120	48	28.57
LINC00710	0	genome.wustl.edu	37	10	10986282	10986282	+	RNA	SNP	T	T	G			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	10	10986282	10986282	T	G	SNP	LINC00710	ENST00000428520	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.019	-	-	-	no_errors	LINC00710	HGNC	ENSG00000229240	tier1	-	-	24	0	0.00	25	9	26.47
LOC285556	0	genome.wustl.edu	37	4	100575648	100575648	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	4	100575648	100575648	C	A	SNP	LOC285556	ENST00000511828	human	ensembl	74_37	-1	putative	missense	c.158	p.G53V	0.486	NULL	NULL	-	no_errors	RP11-766F14.2	Clone_based_vega_gene	ENSG00000248713	tier1	-	-	125	0	0.00	88	21	19.27
LPPR3	0	genome.wustl.edu	37	19	821508	821508	+	Silent	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	19	821508	821508	G	A	SNP	LPPR3	ENST00000359894	human	ensembl	74_37	-1	known	silent	c.52	p.L18	0.998	superfamily_P_Acid_Pase_2/haloperoxidase	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	LPPR3	Uniprot_gn	ENSG00000129951	tier1	-	-	91	0	0.00	37	7	15.91
LRRC37BP1	0	genome.wustl.edu	37	17	28964385	28964385	+	RNA	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	17	28964385	28964385	G	T	SNP	LRRC37BP1	ENST00000417404	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.018	-	-	-	no_errors	LRRC37BP1	HGNC	ENSG00000250462	tier1	-	-	42	0	0.00	26	6	18.75
LRRC3B	0	genome.wustl.edu	37	3	26751271	26751271	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	3	26751271	26751271	G	T	SNP	LRRC3B	ENST00000396641	human	ensembl	74_37	+1	known	missense	c.108	p.K36N	1.000	pfam_LRR-contain_N,smart_LRR-contain_N	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC3B	HGNC	ENSG00000179796	tier1	-	-	35	0	0.00	46	4	8.00
LYPD3	0	genome.wustl.edu	37	19	43965593	43965593	+	Frame_Shift_Del	DEL	C	C	-			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	19	43965593	43965593	C	-	DEL	LYPD3	ENST00000244333	human	ensembl	74_37	-1	known	frame_shift_del	c.951	p.Q319fs	0.000	NULL	pfam_LY6_UPAR,smart_LY6_UPA_recep-like	-	no_errors	LYPD3	HGNC	ENSG00000124466	tier1			63	0	0.00	28	3	9.68
MACROD2	0	genome.wustl.edu	37	20	14830575	14830575	+	RNA	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	20	14830575	14830575	G	T	SNP	MACROD2	ENST00000463861	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	MACROD2	HGNC	ENSG00000172264	tier1	-	-	57	0	0.00	58	4	6.45
MAP2K2	0	genome.wustl.edu	37	19	4090621	4090621	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	19	4090621	4090621	C	T	SNP	MAP2K2	ENST00000262948	human	ensembl	74_37	-1	known	missense	c.1178	p.G393D	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MAP2K2	HGNC	ENSG00000126934				88	0	0.00	54	4	6.90
MAP3K4	0	genome.wustl.edu	37	6	161510458	161510458	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	6	161510458	161510458	G	T	SNP	MAP3K4	ENST00000392142	human	ensembl	74_37	+1	known	missense	c.2928	p.Q976H	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K4	HGNC	ENSG00000085511	tier1	-	-	28	0	0.00	37	4	9.76
MAPK10	0	genome.wustl.edu	37	4	86952542	86952542	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	4	86952542	86952542	G	T	SNP	MAPK10	ENST00000359221	human	ensembl	74_37	-1	known	missense	c.1153	p.H385N	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_MAPK_JNK,pfscan_Prot_kinase_dom	-	no_errors	MAPK10	HGNC	ENSG00000109339	tier1	-	-	62	0	0.00	33	4	10.81
MARCH6	0	genome.wustl.edu	37	5	10382027	10382027	+	Silent	SNP	A	A	G			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	5	10382027	10382027	A	G	SNP	MARCH6	ENST00000274140	human	ensembl	74_37	+1	known	silent	c.306	p.A102	0.966	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH	-	no_errors	MARCH6	HGNC	ENSG00000145495	tier1	-	-	28	0	0.00	31	7	18.42
MCTP2	0	genome.wustl.edu	37	15	95013620	95013620	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	15	95013620	95013620	G	A	SNP	MCTP2	ENST00000357742	human	ensembl	74_37	+1	known	missense	c.2419	p.A807T	0.997	pfam_PRibTrfase_C	pfam_C2_dom,pfam_PRibTrfase_C,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	MCTP2	HGNC	ENSG00000140563	tier1	-	-	40	0	0.00	36	4	10.00
MDH1B	0	genome.wustl.edu	37	2	207619836	207619836	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	2	207619836	207619836	C	T	SNP	MDH1B	ENST00000374412	human	ensembl	74_37	-1	known	missense	c.807	p.M269I	0.004	NULL	pfam_Lactate/malate_DH_C,superfamily_Lactate_DH/Glyco_Ohase_4_C	-	no_errors	MDH1B	HGNC	ENSG00000138400				32	0	0.00	24	2	7.69
MED12	0	genome.wustl.edu	37	X	70339933	70339933	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	X	70339933	70339933	G	T	SNP	MED12	ENST00000333646	human	ensembl	74_37	+1	known	missense	c.466	p.A156S	1.000	pfam_Mediator_Med12	pfam_Mediator_Med12_LCEWAV,pfam_Mediator_Med12_catenin-bd,pfam_Mediator_Med12	-	no_errors	MED12	HGNC	ENSG00000184634	tier1	-	-	37	0	0.00	41	9	18.00
MEGF6	0	genome.wustl.edu	37	1	3431144	3431144	+	Nonsense_Mutation	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	1	3431144	3431144	G	A	SNP	MEGF6	ENST00000356575	human	ensembl	74_37	-1	known	nonsense	c.823	p.Q275*	0.246	smart_EG-like_dom,smart_EGF-like_Ca-bd_dom	pfam_EGF_laminin,pfam_EGF-like_Ca-bd_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_EGF_laminin,pfscan_EG-like_dom,pfscan_EMI_domain	-	no_errors	MEGF6	HGNC	ENSG00000162591	tier1	-	-	29	0	0.00	7	5	41.67
MFNG	0	genome.wustl.edu	37	22	37875509	37875509	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	22	37875509	37875509	G	A	SNP	MFNG	ENST00000438891	human	ensembl	74_37	-1	known	missense	c.386	p.T129I	1.000	NULL	pfam_Fringe-like	-	no_errors	MFNG	HGNC	ENSG00000100060	tier1	-	-	103	0	0.00	57	15	20.83
MID2	0	genome.wustl.edu	37	X	107084038	107084038	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	X	107084038	107084038	G	A	SNP	MID2	ENST00000262843	human	ensembl	74_37	+1	known	missense	c.143	p.S48N	1.000	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Fibronectin_type3,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	MID2	HGNC	ENSG00000080561	tier1	-	-	42	0	0.00	23	12	34.29
MIOX	0	genome.wustl.edu	37	22	50926323	50926323	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	22	50926323	50926323	G	T	SNP	MIOX	ENST00000216075	human	ensembl	74_37	+1	known	missense	c.186	p.Q62H	1.000	pfam_Inositol_oxygenase	pfam_Inositol_oxygenase	-	no_errors	MIOX	HGNC	ENSG00000100253	tier1	-	-	54	0	0.00	28	4	12.50
MIPEP	0	genome.wustl.edu	37	13	24443488	24443488	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	13	24443488	24443488	C	A	SNP	MIPEP	ENST00000382172	human	ensembl	74_37	-1	known	missense	c.886	p.V296L	1.000	pfam_Pept_M3A_M3B	pfam_Pept_M3A_M3B	-	no_errors	MIPEP	HGNC	ENSG00000027001	tier1	-	-	80	0	0.00	39	10	20.41
MIR3648	0	genome.wustl.edu	37	21	9825977	9825977	+	RNA	SNP	T	T	C			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	21	9825977	9825977	T	C	SNP	MIR3648	ENST00000581792	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.075	-	-	-	no_errors	MIR3648	HGNC	ENSG00000264462	tier1	-	-	42	0	0.00	18	6	25.00
MIR497HG	0	genome.wustl.edu	37	17	6920512	6920512	+	RNA	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	17	6920512	6920512	G	T	SNP	MIR497HG	ENST00000443997	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	MIR497HG	HGNC	ENSG00000267532	tier1	-	-	57	0	0.00	36	4	10.00
MST1L	0	genome.wustl.edu	37	1	17087349	17087349	+	RNA	SNP	T	T	C			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	1	17087349	17087349	T	C	SNP	MST1L	ENST00000545160	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	MST1L	HGNC	ENSG00000186715	tier1	-	-	404	0	0.00	318	19	5.64
MUC12	0	genome.wustl.edu	37	7	100634150	100634150	+	Silent	SNP	C	C	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	7	100634150	100634150	C	A	SNP	MUC12	ENST00000536621	human	ensembl	74_37	+1	known	silent	c.306	p.T102	0.000	NULL	pfam_SEA_dom	-	no_errors	MUC12	HGNC	ENSG00000205277	tier1	-	-	142	0	0.00	91	29	24.17
MYB	0	genome.wustl.edu	37	6	135521339	135521339	+	Splice_Site	SNP	T	T	C			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	6	135521339	135521339	T	C	SNP	MYB	ENST00000341911	human	ensembl	74_37	+1	known	splice_site	c.1824+2	e12+2	1.000	-	-	-	no_errors	MYB	HGNC	ENSG00000118513	tier1	-	-	65	0	0.00	89	9	9.18
MYO5A	0	genome.wustl.edu	37	15	52676452	52676452	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	15	52676452	52676452	G	A	SNP	MYO5A	ENST00000358212	human	ensembl	74_37	-1	known	missense	c.1820	p.S607L	0.135	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Dil_domain,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Skp1_comp_dimer,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_Dilute,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO5A	HGNC	ENSG00000197535	tier1	-	-	85	0	0.00	60	15	20.00
MZB1	0	genome.wustl.edu	37	5	138725510	138725512	+	In_Frame_Del	DEL	CAG	CAG	-			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	CAG	CAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	5	138725510	138725512	CAG	-	DEL	MZB1	ENST00000503481	human	ensembl	74_37	-1	known	in_frame_del	c.36_34	p.L12in_frame_del	0.366:0.352:0.265	NULL	NULL	-	no_errors	MZB1	HGNC	ENSG00000170476	tier1			24	0	0.00	17	3	15.00
NACAD	0	genome.wustl.edu	37	7	45125071	45125071	+	Silent	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	7	45125071	45125071	G	A	SNP	NACAD	ENST00000490531	human	ensembl	74_37	-1	known	silent	c.708	p.L236	1.000	NULL	pfam_Nas_poly-pep-assoc_cplx_dom,pfscan_Nas_poly-pep-assoc_cplx_dom	-	no_errors	NACAD	HGNC	ENSG00000136274	tier1	-	-	82	0	0.00	48	6	11.11
NAE1	0	genome.wustl.edu	37	16	66850909	66850909	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	16	66850909	66850909	G	T	SNP	NAE1	ENST00000290810	human	ensembl	74_37	-1	known	missense	c.707	p.T236K	0.224	superfamily_Molybdenum_cofac_synth_MoeB	pfam_ThiF_NAD_FAD-bd,superfamily_Molybdenum_cofac_synth_MoeB	-	no_errors	NAE1	HGNC	ENSG00000159593	tier1	-	-	79	0	0.00	71	4	5.33
NAGS	0	genome.wustl.edu	37	17	42084980	42084980	+	Silent	SNP	G	G	C			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	17	42084980	42084980	G	C	SNP	NAGS	ENST00000293404	human	ensembl	74_37	+1	known	silent	c.1290	p.L430	1.000	pfam_DUF619,superfamily_Acyl_CoA_acyltransferase,pirsf_GlcNAc_Synth_met,pfscan_GNAT_dom	pfam_DUF619,superfamily_Asp/Glu/Uridylate_kinase,superfamily_Acyl_CoA_acyltransferase,pirsf_GlcNAc_Synth_met,pfscan_GNAT_dom	-	no_errors	NAGS	HGNC	ENSG00000161653	tier1	-	-	24	0	0.00	14	7	33.33
NAT14	0	genome.wustl.edu	37	19	55998266	55998266	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	19	55998266	55998266	G	T	SNP	NAT14	ENST00000205194	human	ensembl	74_37	+1	known	missense	c.564	p.E188D	0.991	superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	pfam_GNAT_dom,superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	-	no_errors	NAT14	HGNC	ENSG00000090971	tier1	-	-	29	0	0.00	7	3	30.00
NAV3	0	genome.wustl.edu	37	12	78511809	78511809	+	Silent	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	12	78511809	78511809	G	T	SNP	NAV3	ENST00000397909	human	ensembl	74_37	+1	known	silent	c.2772	p.L924	0.998	NULL	pfam_CH-domain,pfam_ATPase_AAA_core,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV3	HGNC	ENSG00000067798	tier1	-	-	42	0	0.00	30	4	11.76
NCOA2	0	genome.wustl.edu	37	8	71126198	71126198	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	8	71126198	71126198	G	T	SNP	NCOA2	ENST00000452400	human	ensembl	74_37	-1	known	missense	c.199	p.P67T	1.000	superfamily_bHLH_dom,smart_bHLH_dom,pirsf_Nuclear_rcpt_coactivator,pfscan_bHLH_dom	pfam_DUF1518,pfam_SRC-1,pfam_Nuc_rcpt_coact_Ncoa-typ,pfam_PAS_fold,superfamily_PAS,superfamily_Nuc_rcpt_coact,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,pirsf_Nuclear_rcpt_coactivator,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	NCOA2	HGNC	ENSG00000140396	tier1	-	-	67	0	0.00	49	7	12.50
NCOR2	0	genome.wustl.edu	37	12	124824597	124824597	+	Frame_Shift_Del	DEL	T	T	-			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	12	124824597	124824597	T	-	DEL	NCOR2	ENST00000356219	human	ensembl	74_37	-1	known	frame_shift_del	c.5663	p.K1888fs	1.000	NULL	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	NCOR2	HGNC	ENSG00000196498	tier1			54	0	0.00	19	2	9.52
NDNF	0	genome.wustl.edu	37	4	121958158	121958158	+	Missense_Mutation	SNP	A	A	G			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	4	121958158	121958158	A	G	SNP	NDNF	ENST00000379692	human	ensembl	74_37	-1	known	missense	c.968	p.M323T	0.668	pfam_DUF2369,superfamily_Fibronectin_type3,smart_Fibronectin_type3	pfam_DUF2369,superfamily_Fibronectin_type3,smart_Fibronectin_type3	-	no_errors	NDNF	HGNC	ENSG00000173376				18	0	0.00	13	2	13.33
NDST2	0	genome.wustl.edu	37	10	75563503	75563503	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	10	75563503	75563503	G	T	SNP	NDST2	ENST00000309979	human	ensembl	74_37	-1	known	nonsense	c.1971	p.Y657*	1.000	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Heparan_SO4_deacetylase,pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	NDST2	HGNC	ENSG00000166507				74	0	0.00	73	4	5.19
NEURL	0	genome.wustl.edu	37	10	105349417	105349418	+	Frame_Shift_Ins	INS	-	-	GTAA			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	10	105349417	105349418	-	GTAA	INS	NEURL	ENST00000369780	human	ensembl	74_37	+1	known	frame_shift_ins	c.1486_1487	p.T497fs	0.998:1.000	NULL	pfam_Neu_Z,smart_Neu_Z,pfscan_Neu_Z,pfscan_Znf_RING	-	no_errors	NEURL	HGNC	ENSG00000107954	tier1			51	0	0.00	27	3	10.00
NLGN3	0	genome.wustl.edu	37	X	70367646	70367646	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	X	70367646	70367646	C	A	SNP	NLGN3	ENST00000358741	human	ensembl	74_37	+1	known	missense	c.47	p.P16H	0.935	NULL	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Neuroligin	-	no_errors	NLGN3	HGNC	ENSG00000196338	tier1	-	-	81	0	0.00	35	12	25.53
NOP14	0	genome.wustl.edu	37	4	2955331	2955331	+	Silent	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	4	2955331	2955331	C	T	SNP	NOP14	ENST00000416614	human	ensembl	74_37	-1	known	silent	c.654	p.T218	0.013	pfam_Nop14	pfam_Nop14	-	no_errors	NOP14	HGNC	ENSG00000087269	tier1	-	-	35	0	0.00	27	4	12.90
NPC1L1	0	genome.wustl.edu	37	7	44561742	44561742	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	7	44561742	44561742	C	T	SNP	NPC1L1	ENST00000289547	human	ensembl	74_37	-1	known	missense	c.2737	p.E913K	0.001	NULL	pfam_Patched,pfscan_SSD	-	no_errors	NPC1L1	HGNC	ENSG00000015520	tier1	-	-	52	0	0.00	68	12	15.00
NPLOC4	0	genome.wustl.edu	37	17	79564312	79564312	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	17	79564312	79564312	C	T	SNP	NPLOC4	ENST00000374747	human	ensembl	74_37	-1	known	missense	c.952	p.E318K	1.000	pfam_NPL4,pirsf_PolyUb_recognition_cplx_Npl4	pfam_NPL4,pfam_NPL4_Zn-bd_put,pfam_Npl4_Ub-like_dom,pirsf_PolyUb_recognition_cplx_Npl4	-	no_errors	NPLOC4	HGNC	ENSG00000182446	tier1	-	-	51	0	0.00	43	10	18.87
NPR1	0	genome.wustl.edu	37	1	153653735	153653735	+	Missense_Mutation	SNP	A	A	G			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	1	153653735	153653735	A	G	SNP	NPR1	ENST00000368680	human	ensembl	74_37	+1	known	missense	c.1001	p.Y334C	0.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_A/G_cyclase,pfam_ANF_lig-bd_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Peripla_BP_I,superfamily_A/G_cyclase,superfamily_Kinase-like_dom,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_A/G_cyclase,prints_Ntpep_rcpt,pfscan_Prot_kinase_dom,pfscan_A/G_cyclase	-	no_errors	NPR1	HGNC	ENSG00000169418				34	0	0.00	21	3	12.50
NUP155	0	genome.wustl.edu	37	5	37304888	37304888	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	5	37304888	37304888	G	T	SNP	NUP155	ENST00000231498	human	ensembl	74_37	-1	known	missense	c.3115	p.L1039I	1.000	pfam_Nucleoporin_Nup133/Nup155_C	pfam_Nucleoporin_Nup133/Nup155_C,pfam_Nucleoporin_Nup133/Nup155_N,superfamily_WD40_repeat_dom	-	no_errors	NUP155	HGNC	ENSG00000113569	tier1	-	-	41	0	0.00	60	4	6.25
NXPH2	0	genome.wustl.edu	37	2	139428697	139428697	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	2	139428697	139428697	G	A	SNP	NXPH2	ENST00000272641	human	ensembl	74_37	-1	known	missense	c.590	p.A197V	0.996	pfam_NXPH/NXPE,pirsf_Neurexophilin	pfam_NXPH/NXPE,pirsf_Neurexophilin	-	no_errors	NXPH2	HGNC	ENSG00000144227				24	0	0.00	28	2	6.67
OBSCN	0	genome.wustl.edu	37	1	228467709	228467709	+	Silent	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	1	228467709	228467709	C	T	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	silent	c.7584	p.L2528	0.015	pfam_Ig_I-set,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358	tier1	-	-	30	0	0.00	19	5	20.83
OIT3	0	genome.wustl.edu	37	10	74684045	74684045	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	10	74684045	74684045	C	T	SNP	OIT3	ENST00000334011	human	ensembl	74_37	+1	known	missense	c.1010	p.P337L	1.000	pfam_ZP_dom,smart_ZP_dom,pfscan_ZP_dom	pfam_ZP_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_ZP_dom,pfscan_ZP_dom,prints_ZP_dom	-	no_errors	OIT3	HGNC	ENSG00000138315	tier1	-	-	70	0	0.00	33	16	32.65
OR1E1	0	genome.wustl.edu	37	17	3301281	3301281	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	17	3301281	3301281	G	T	SNP	OR1E1	ENST00000322608	human	ensembl	74_37	-1	known	missense	c.424	p.L142I	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1E1	HGNC	ENSG00000180016				87	0	0.00	56	5	8.20
OR4K2	0	genome.wustl.edu	37	14	20345037	20345037	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	14	20345037	20345037	G	A	SNP	OR4K2	ENST00000298642	human	ensembl	74_37	+1	known	missense	c.611	p.G204D	0.999	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4K2	HGNC	ENSG00000165762	tier1	-	-	41	0	0.00	15	3	16.67
OR52I2	0	genome.wustl.edu	37	11	4608080	4608080	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	11	4608080	4608080	T	C	SNP	OR52I2	ENST00000312614	human	ensembl	74_37	+1	known	missense	c.38	p.I13T	0.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52I2	HGNC	ENSG00000226288	tier1	-	-	35	0	0.00	36	6	14.29
OVGP1	0	genome.wustl.edu	37	1	111964264	111964264	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	1	111964264	111964264	C	A	SNP	OVGP1	ENST00000369732	human	ensembl	74_37	-1	known	missense	c.640	p.D214Y	1.000	pfam_Glyco_hydro18cat,superfamily_Glycoside_hydrolase_SF,smart_Chitinase_II	pfam_Glyco_hydro18cat,superfamily_Glycoside_hydrolase_SF,smart_Chitinase_II	-	no_errors	OVGP1	HGNC	ENSG00000085465	tier1	-	-	49	0	0.00	50	10	16.67
P4HA2	0	genome.wustl.edu	37	5	131528849	131528850	+	RNA	INS	-	-	C			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	5	131528849	131528850	-	C	INS	P4HA2	ENST00000506807	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003:0.002	-	-	-	no_errors	P4HA2	HGNC	ENSG00000072682	tier1			29	0	0.00	22	2	8.33
PACRG	0	genome.wustl.edu	37	6	163510422	163510422	+	Missense_Mutation	SNP	A	A	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	6	163510422	163510422	A	T	SNP	PACRG	ENST00000337019	human	ensembl	74_37	+1	known	missense	c.595	p.I199F	1.000	pfam_Parkin_co-regulated_protein,superfamily_ARM-type_fold	pfam_Parkin_co-regulated_protein,superfamily_ARM-type_fold	-	no_errors	PACRG	HGNC	ENSG00000112530	tier1	-	-	54	0	0.00	37	21	36.21
PADI6	0	genome.wustl.edu	37	1	17698739	17698739	+	RNA	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	1	17698739	17698739	G	T	SNP	PADI6	ENST00000358481	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.027	-	-	-	no_errors	PADI6	HGNC	ENSG00000256049	tier1	-	-	41	0	0.00	45	4	8.16
PARD3B	0	genome.wustl.edu	37	2	206041301	206041301	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	2	206041301	206041301	G	T	SNP	PARD3B	ENST00000406610	human	ensembl	74_37	+1	known	missense	c.1924	p.G642C	1.000	NULL	pfam_DUF3534,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PARD3B	HGNC	ENSG00000116117				44	0	0.00	21	2	8.70
PARP1	0	genome.wustl.edu	37	1	226551783	226551783	+	RNA	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	1	226551783	226551783	G	T	SNP	PARP1	ENST00000463968	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.835	-	-	-	no_errors	PARP1	HGNC	ENSG00000143799	tier1	-	-	55	0	0.00	47	4	7.84
PARP16	0	genome.wustl.edu	37	15	65553309	65553309	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	15	65553309	65553309	G	C	SNP	PARP16	ENST00000261888	human	ensembl	74_37	-1	known	missense	c.747	p.D249E	0.533	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_cat_dom	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	PARP16	HGNC	ENSG00000138617	tier1	-	-	56	0	0.00	31	4	11.43
PAXIP1	0	genome.wustl.edu	37	7	154760285	154760285	+	Missense_Mutation	SNP	C	C	G			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	7	154760285	154760285	C	G	SNP	PAXIP1	ENST00000397192	human	ensembl	74_37	-1	known	missense	c.1626	p.Q542H	0.930	NULL	pfam_BRCT_dom,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	-	no_errors	PAXIP1	HGNC	ENSG00000157212				22	0	0.00	13	2	13.33
PCDH11X	0	genome.wustl.edu	37	X	91642828	91642828	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	X	91642828	91642828	G	T	SNP	PCDH11X	ENST00000373094	human	ensembl	74_37	+1	known	missense	c.3239	p.S1080I	1.000	NULL	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH11X	HGNC	ENSG00000102290	tier1	-	-	83	0	0.00	68	4	5.56
PCDH17	0	genome.wustl.edu	37	13	58299063	58299063	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	13	58299063	58299063	C	A	SNP	PCDH17	ENST00000377918	human	ensembl	74_37	+1	known	missense	c.3115	p.P1039T	1.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH17	HGNC	ENSG00000118946	tier1	-	-	30	0	0.00	13	4	22.22
PCDH19	0	genome.wustl.edu	37	X	99661722	99661722	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	X	99661722	99661722	C	T	SNP	PCDH19	ENST00000373034	human	ensembl	74_37	-1	known	missense	c.1874	p.R625K	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH19	HGNC	ENSG00000165194	tier1	-	-	37	0	0.00	24	6	20.00
PCDHB6	0	genome.wustl.edu	37	5	140530577	140530577	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	5	140530577	140530577	G	T	SNP	PCDHB6	ENST00000231136	human	ensembl	74_37	+1	known	nonsense	c.739	p.E247*	0.966	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB6	HGNC	ENSG00000113211				31	0	0.00	41	4	8.89
PCDHB7	0	genome.wustl.edu	37	5	140554584	140554584	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	5	140554584	140554584	G	T	SNP	PCDHB7	ENST00000231137	human	ensembl	74_37	+1	known	missense	c.2168	p.C723F	0.032	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB7	HGNC	ENSG00000113212	tier1	-	-	85	0	0.00	51	14	21.54
PCDHGB2	0	genome.wustl.edu	37	5	140741730	140741730	+	Silent	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	5	140741730	140741730	C	T	SNP	PCDHGB2	ENST00000522605	human	ensembl	74_37	+1	known	silent	c.2028	p.S676	0.048	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB2	HGNC	ENSG00000253910				49	0	0.00	33	2	5.71
PCSK7	0	genome.wustl.edu	37	11	117098032	117098032	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	11	117098032	117098032	C	T	SNP	PCSK7	ENST00000320934	human	ensembl	74_37	-1	known	missense	c.610	p.E204K	1.000	pfam_Peptidase_S8/S53_dom,superfamily_Peptidase_S8/S53_dom	pfam_Peptidase_S8/S53_dom,pfam_PrprotnconvertsP,superfamily_Peptidase_S8/S53_dom,superfamily_Galactose-bd-like,superfamily_Prot_inh_propept,prints_Peptidase_S8_subtilisin-rel	-	no_errors	PCSK7	HGNC	ENSG00000160613	tier1	-	-	31	0	0.00	23	10	30.30
PDXK	0	genome.wustl.edu	37	21	45152521	45152521	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	21	45152521	45152521	C	T	SNP	PDXK	ENST00000327574	human	ensembl	74_37	+1	putative	missense	c.263	p.S88L	0.000	NULL	NULL	-	no_errors	PDXK	HGNC	ENSG00000160209	tier1	-	-	62	0	0.00	49	6	10.91
PHF16	0	genome.wustl.edu	37	X	46917885	46917885	+	Silent	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	X	46917885	46917885	G	A	SNP	PHF16	ENST00000218343	human	ensembl	74_37	+1	known	silent	c.1878	p.P626	0.024	NULL	pfam_Enhancer_polycomb-like_N,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF16	HGNC	ENSG00000102221	tier1	-	-	38	0	0.00	25	10	28.57
PLBD2	0	genome.wustl.edu	37	12	113824744	113824744	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	12	113824744	113824744	C	T	SNP	PLBD2	ENST00000280800	human	ensembl	74_37	+1	known	missense	c.1289	p.S430F	1.000	pfam_PLipase_B-like	pfam_PLipase_B-like	-	no_errors	PLBD2	HGNC	ENSG00000151176	tier1	-	-	32	0	0.00	18	10	35.71
PLCH1	0	genome.wustl.edu	37	3	155282725	155282725	+	Missense_Mutation	SNP	C	C	G			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	3	155282725	155282725	C	G	SNP	PLCH1	ENST00000340059	human	ensembl	74_37	-1	known	missense	c.1012	p.E338Q	1.000	pfam_PLipase_C_PInositol-sp_X_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_PInositol-sp_X_dom,prints_Pinositol_PLipase_C	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_Pleckstrin_homology,smart_EF_hand_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pfscan_EF_hand_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCH1	HGNC	ENSG00000114805	tier1	-	-	42	0	0.00	36	19	34.55
PLK3	0	genome.wustl.edu	37	1	45270777	45270778	+	RNA	INS	-	-	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	1	45270777	45270778	-	A	INS	PLK3	ENST00000461769	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.017:0.019	-	-	-	no_errors	PLK3	HGNC	ENSG00000173846	tier1			20	0	0.00	13	3	18.75
PNLIPRP1	0	genome.wustl.edu	37	10	118354274	118354274	+	Missense_Mutation	SNP	C	C	G			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	10	118354274	118354274	C	G	SNP	PNLIPRP1	ENST00000358834	human	ensembl	74_37	+1	known	missense	c.363	p.I121M	0.929	pfam_Lipase_N,pirsf_Lipoprotein_lipase_LIPH,prints_Lipase_panc,prints_Lipase	pfam_Lipase_N,pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,pirsf_Lipoprotein_lipase_LIPH,pfscan_PLAT/LH2_dom,prints_Lipase_panc,prints_Lipase	-	no_errors	PNLIPRP1	HGNC	ENSG00000187021	tier1	-	-	55	0	0.00	43	11	20.37
POU6F1	0	genome.wustl.edu	37	12	51586185	51586185	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	12	51586185	51586185	C	T	SNP	POU6F1	ENST00000333640	human	ensembl	74_37	-1	known	missense	c.319	p.A107T	0.044	NULL	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU6F1	HGNC	ENSG00000184271				31	0	0.00	28	3	9.68
PPM1D	0	genome.wustl.edu	37	17	58700916	58700916	+	Silent	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	17	58700916	58700916	C	T	SNP	PPM1D	ENST00000305921	human	ensembl	74_37	+1	known	silent	c.507	p.S169	1.000	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	-	no_errors	PPM1D	HGNC	ENSG00000170836	tier1	-	-	53	0	0.00	51	18	25.71
PPOX	0	genome.wustl.edu	37	1	161140274	161140274	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	1	161140274	161140274	G	T	SNP	PPOX	ENST00000352210	human	ensembl	74_37	+1	known	nonsense	c.1063	p.E355*	1.000	pfam_Amino_oxidase,tigrfam_Protoporphyrinogen_oxidase	pfam_Amino_oxidase,tigrfam_Protoporphyrinogen_oxidase	-	no_errors	PPOX	HGNC	ENSG00000143224				32	0	0.00	21	5	19.23
PRB1	0	genome.wustl.edu	37	12	11506274	11506274	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	12	11506274	11506274	G	C	SNP	PRB1	ENST00000500254	human	ensembl	74_37	-1	known	missense	c.364	p.P122A	0.000	NULL	NULL	-	no_errors	PRB1	HGNC	ENSG00000251655	tier1	-	-	103	0	0.00	92	5	5.15
PRDM6	0	genome.wustl.edu	37	5	122495267	122495267	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	5	122495267	122495267	G	T	SNP	PRDM6	ENST00000407847	human	ensembl	74_37	+1	known	missense	c.1088	p.W363L	1.000	pfam_SET_dom,smart_SET_dom,pfscan_SET_dom	pfam_Znf_C2H2,pfam_SET_dom,smart_SET_dom,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM6	HGNC	ENSG00000061455	tier1	-	-	77	0	0.00	66	4	5.71
PRKCSH	0	genome.wustl.edu	37	19	11558541	11558541	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	19	11558541	11558541	G	T	SNP	PRKCSH	ENST00000252455	human	ensembl	74_37	+1	known	missense	c.1042	p.A348S	0.921	NULL	pfam_PRKCSH,superfamily_Man6P_isomerase_rcpt-bd_dom,superfamily_LDrepeatLR_classA_rpt,pfscan_EF_hand_dom	-	no_errors	PRKCSH	HGNC	ENSG00000130175	tier1	-	-	41	0	0.00	30	4	11.76
PRMT5	0	genome.wustl.edu	37	14	23392262	23392262	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	14	23392262	23392262	C	T	SNP	PRMT5	ENST00000324366	human	ensembl	74_37	-1	known	missense	c.1483	p.E495K	1.000	pfam_Arg_MeTrfase,pirsf_Arg_MeTrfase_PRMT5	pfam_Arg_MeTrfase,pirsf_Arg_MeTrfase_PRMT5	-	no_errors	PRMT5	HGNC	ENSG00000100462	tier1	-	-	37	0	0.00	20	14	41.18
PRR4	0	genome.wustl.edu	37	12	11002053	11002053	+	RNA	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	12	11002053	11002053	G	T	SNP	PRR4	ENST00000542658	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	PRR4	HGNC	ENSG00000111215	tier1	-	-	66	0	0.00	61	4	6.15
PRSS38	0	genome.wustl.edu	37	1	228033281	228033281	+	Frame_Shift_Del	DEL	G	G	-			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	1	228033281	228033281	G	-	DEL	PRSS38	ENST00000366757	human	ensembl	74_37	+1	known	frame_shift_del	c.694	p.D233fs	0.942	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	PRSS38	HGNC	ENSG00000185888	tier1			48	0	0.00	28	2	6.67
PTPRS	0	genome.wustl.edu	37	19	5244258	5244258	+	Silent	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	19	5244258	5244258	G	A	SNP	PTPRS	ENST00000372412	human	ensembl	74_37	-1	known	silent	c.1227	p.I409	0.925	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom	-	no_errors	PTPRS	HGNC	ENSG00000105426	tier1	rs2230609	-	89	0	0.00	43	12	21.82
PVRL1	0	genome.wustl.edu	37	11	119545303	119545303	+	Silent	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	11	119545303	119545303	C	T	SNP	PVRL1	ENST00000340882	human	ensembl	74_37	-1	known	silent	c.1058	p.*353	0.000	NULL	pfam_CD80_C2-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	PVRL1	HGNC	ENSG00000110400	tier1	-	-	68	0	0.00	54	16	22.86
PVRL1	0	genome.wustl.edu	37	11	119545984	119545984	+	Missense_Mutation	SNP	C	C	G			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	11	119545984	119545984	C	G	SNP	PVRL1	ENST00000264025	human	ensembl	74_37	-1	known	missense	c.888	p.Q296H	0.998	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_CD80_C2-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	PVRL1	HGNC	ENSG00000110400	tier1	-	-	79	0	0.00	57	25	30.49
RB1	0	genome.wustl.edu	37	13	49030486	49030486	+	Splice_Site	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	13	49030486	49030486	G	T	SNP	RB1	ENST00000267163	human	ensembl	74_37	+1	known	splice_site	c.1960+1	e19+1	1.000	-	-	-	no_errors	RB1	HGNC	ENSG00000139687				30	0	0.00	27	2	6.90
RBM10	0	genome.wustl.edu	37	X	47030561	47030563	+	In_Frame_Del	DEL	GGA	GGA	-			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	GGA	GGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	X	47030561	47030563	GGA	-	DEL	RBM10	ENST00000377604	human	ensembl	74_37	+1	known	in_frame_del	c.336_338	p.E116in_frame_del	1.000:1.000:1.000	NULL	pfam_G_patch_dom,pfam_RRM_dom,pfam_Znf_RanBP2,smart_RRM_dom,smart_Znf_RanBP2,smart_G_patch_dom,pfscan_Znf_RanBP2,pfscan_Znf_C2H2,pfscan_G_patch_dom,pfscan_RRM_dom	-	no_errors	RBM10	HGNC	ENSG00000182872	tier1			49	0	0.00	23	3	11.54
REG3G	0	genome.wustl.edu	37	2	79254209	79254209	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	2	79254209	79254209	G	T	SNP	REG3G	ENST00000272324	human	ensembl	74_37	+1	known	missense	c.245	p.G82V	0.002	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	REG3G	HGNC	ENSG00000143954	tier1	-	-	72	0	0.00	33	11	25.00
RELT	0	genome.wustl.edu	37	11	73104900	73104900	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	11	73104900	73104900	G	A	SNP	RELT	ENST00000064780	human	ensembl	74_37	+1	known	missense	c.644	p.R215Q	0.008	NULL	pfam_TNF_rcpt_RELT,prints_TNFR_19-like	-	no_errors	RELT	HGNC	ENSG00000054967	tier1	-	-	52	0	0.00	41	7	14.58
REN	0	genome.wustl.edu	37	1	204131165	204131165	+	Silent	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	1	204131165	204131165	G	A	SNP	REN	ENST00000272190	human	ensembl	74_37	-1	known	silent	c.225	p.S75	0.344	superfamily_Peptidase_aspartic_dom	pfam_Aspartic_peptidase,pfam_Aspartic_peptidase_N,superfamily_Peptidase_aspartic_dom,prints_Aspartic_peptidase	-	no_errors	REN	HGNC	ENSG00000143839	tier1	-	-	69	0	0.00	40	14	25.93
RGMA	0	genome.wustl.edu	37	15	93595305	93595305	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	15	93595305	93595305	G	A	SNP	RGMA	ENST00000329082	human	ensembl	74_37	-1	known	missense	c.563	p.P188L	1.000	pfam_RGM_N	pfam_RGM_N,pfam_RGM_C	-	no_errors	RGMA	HGNC	ENSG00000182175	tier1	-	-	52	0	0.00	25	10	28.57
RIN2	0	genome.wustl.edu	37	20	19982600	19982600	+	RNA	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	20	19982600	19982600	G	T	SNP	RIN2	ENST00000484638	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.043	-	-	-	no_errors	RIN2	HGNC	ENSG00000132669	tier1	-	-	53	0	0.00	21	3	12.50
RLTPR	0	genome.wustl.edu	37	16	67682606	67682606	+	Silent	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	16	67682606	67682606	C	T	SNP	RLTPR	ENST00000334583	human	ensembl	74_37	+1	known	silent	c.1458	p.L486	0.653	smart_Leu-rich_rpt_RNase_inh_sub-typ	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	RLTPR	HGNC	ENSG00000159753	tier1	-	-	32	0	0.00	16	4	20.00
RNASE2	0	genome.wustl.edu	37	14	21424157	21424157	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	14	21424157	21424157	C	A	SNP	RNASE2	ENST00000304625	human	ensembl	74_37	+1	known	missense	c.227	p.A76D	0.000	pfam_RNaseA_domain,superfamily_RNaseA_domain,smart_RNaseA_domain,prints_RNaseA	pfam_RNaseA_domain,superfamily_RNaseA_domain,smart_RNaseA_domain,prints_RNaseA	-	no_errors	RNASE2	HGNC	ENSG00000169385	tier1	-	-	75	0	0.00	22	16	42.11
RNF208	0	genome.wustl.edu	37	9	140115495	140115495	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	9	140115495	140115495	G	T	SNP	RNF208	ENST00000391553	human	ensembl	74_37	-1	known	missense	c.170	p.T57N	1.000	NULL	pfscan_Znf_RING	-	no_errors	RNF208	HGNC	ENSG00000212864				53	0	0.00	40	3	6.98
RPL32	0	genome.wustl.edu	37	3	12877607	12877607	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	3	12877607	12877607	C	T	SNP	RPL32	ENST00000396953	human	ensembl	74_37	-1	known	missense	c.394	p.E132K	1.000	superfamily_Ribosomal_L32e	pfam_Ribosomal_L32e,superfamily_Ribosomal_L32e	-	no_errors	RPL32	HGNC	ENSG00000144713	tier1	-	-	74	0	0.00	47	21	30.88
RPP25	0	genome.wustl.edu	37	15	75248376	75248376	+	Silent	SNP	C	C	G			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	15	75248376	75248376	C	G	SNP	RPP25	ENST00000322177	human	ensembl	74_37	-1	known	silent	c.549	p.A183	0.098	NULL	pfam_DNA/RNA-bd_Alba-like	-	no_errors	RPP25	HGNC	ENSG00000178718	tier1	-	-	48	0	0.00	26	7	20.59
RPUSD2	0	genome.wustl.edu	37	15	40861732	40861732	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	15	40861732	40861732	G	C	SNP	RPUSD2	ENST00000315616	human	ensembl	74_37	+1	known	missense	c.196	p.E66Q	0.015	NULL	pfam_PsdUridine_synth_RsuA/RluD,superfamily_PsdUridine_synth_cat_dom,tigrfam_PsdUridine_synth_RluC/D	-	no_errors	RPUSD2	HGNC	ENSG00000166133	tier1	-	-	61	0	0.00	29	7	19.44
SAMD9L	0	genome.wustl.edu	37	7	92762448	92762448	+	Frame_Shift_Del	DEL	A	A	-			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	7	92762448	92762448	A	-	DEL	SAMD9L	ENST00000318238	human	ensembl	74_37	-1	known	frame_shift_del	c.2837	p.L946fs	0.997	NULL	superfamily_SAM/pointed,superfamily_P-loop_NTPase,pfscan_SAM	-	no_errors	SAMD9L	HGNC	ENSG00000177409	tier1			15	0	0.00	12	2	14.29
SBNO1	0	genome.wustl.edu	37	12	123798200	123798200	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	12	123798200	123798200	G	T	SNP	SBNO1	ENST00000420886	human	ensembl	74_37	-1	known	missense	c.3187	p.P1063T	1.000	NULL	pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Prismane-like	-	no_errors	SBNO1	HGNC	ENSG00000139697	tier1	-	-	37	0	0.00	40	4	9.09
SCN9A	0	genome.wustl.edu	37	2	167133514	167133514	+	Silent	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	2	167133514	167133514	G	A	SNP	SCN9A	ENST00000303354	human	ensembl	74_37	-1	known	silent	c.2856	p.V952	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,smart_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN9A	HGNC	ENSG00000169432	tier1	-	-	89	0	0.00	58	13	18.31
SERPINA6	0	genome.wustl.edu	37	14	94770818	94770818	+	Silent	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	14	94770818	94770818	G	T	SNP	SERPINA6	ENST00000341584	human	ensembl	74_37	-1	known	silent	c.1155	p.I385	0.001	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINA6	HGNC	ENSG00000170099	tier1	-	-	78	0	0.00	72	4	5.26
SERTAD2	0	genome.wustl.edu	37	2	64863890	64863890	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	2	64863890	64863890	G	T	SNP	SERTAD2	ENST00000313349	human	ensembl	74_37	-1	known	missense	c.116	p.T39N	1.000	pfscan_SERTA	pfam_SERTA,pfscan_SERTA	-	no_errors	SERTAD2	HGNC	ENSG00000179833	tier1	-	-	46	0	0.00	40	4	9.09
SFTPA2	0	genome.wustl.edu	37	10	81319210	81319210	+	Silent	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	10	81319210	81319210	G	A	SNP	SFTPA2	ENST00000372325	human	ensembl	74_37	-1	known	silent	c.30	p.L10	0.114	NULL	pfam_C-type_lectin,pfam_Collagen,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	SFTPA2	HGNC	ENSG00000185303	tier1	-	-	54	0	0.00	26	11	29.73
SH2D3A	0	genome.wustl.edu	37	19	6752623	6752623	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	19	6752623	6752623	C	T	SNP	SH2D3A	ENST00000245908	human	ensembl	74_37	-1	known	missense	c.1712	p.R571H	0.741	smart_RasGRF_CDC25	pfam_SH2,pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_SH2,smart_RasGRF_CDC25,pfscan_SH2,prints_SH2	-	no_errors	SH2D3A	HGNC	ENSG00000125731	tier1	-	-	90	0	0.00	36	19	34.55
SIGLEC10	0	genome.wustl.edu	37	19	51914441	51914441	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	19	51914441	51914441	G	T	SNP	SIGLEC10	ENST00000339313	human	ensembl	74_37	-1	known	missense	c.2006	p.T669K	0.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	SIGLEC10	HGNC	ENSG00000142512				63	0	0.00	52	3	5.45
SIX1	0	genome.wustl.edu	37	14	61115638	61115638	+	Silent	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	14	61115638	61115638	C	T	SNP	SIX1	ENST00000247182	human	ensembl	74_37	-1	known	silent	c.270	p.A90	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	SIX1	HGNC	ENSG00000126778				44	0	0.00	34	2	5.56
SLC19A1	0	genome.wustl.edu	37	21	46950838	46950838	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	21	46950838	46950838	G	A	SNP	SLC19A1	ENST00000311124	human	ensembl	74_37	-1	known	missense	c.997	p.R333C	0.298	pfam_Folate_carrier,superfamily_MFS_dom_general_subst_transpt,pirsf_Folate_carrier,tigrfam_Folate_carrier	pfam_Folate_carrier,superfamily_MFS_dom_general_subst_transpt,pirsf_Folate_carrier,tigrfam_Folate_carrier	-	no_errors	SLC19A1	HGNC	ENSG00000173638	tier1	-	-	33	0	0.00	23	10	30.30
SLC25A21	0	genome.wustl.edu	37	14	37154021	37154021	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	14	37154021	37154021	G	T	SNP	SLC25A21	ENST00000331299	human	ensembl	74_37	-1	known	missense	c.713	p.P238H	1.000	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier	-	no_errors	SLC25A21	HGNC	ENSG00000183032	tier1	-	-	71	0	0.00	58	4	6.45
SLC37A1	0	genome.wustl.edu	37	21	43955658	43955658	+	Silent	SNP	C	C	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	21	43955658	43955658	C	A	SNP	SLC37A1	ENST00000352133	human	ensembl	74_37	+1	known	silent	c.348	p.L116	0.997	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC37A1	HGNC	ENSG00000160190	tier1	rs199619177	-	96	0	0.00	54	8	12.90
SLC38A1	0	genome.wustl.edu	37	12	46582819	46582819	+	Silent	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	12	46582819	46582819	G	T	SNP	SLC38A1	ENST00000398637	human	ensembl	74_37	-1	known	silent	c.1398	p.S466	0.998	pfam_AA_transpt_TM	pfam_AA_transpt_TM	-	no_errors	SLC38A1	HGNC	ENSG00000111371	tier1	-	-	38	0	0.00	52	4	7.14
SLC38A4	0	genome.wustl.edu	37	12	47172402	47172402	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	12	47172402	47172402	C	T	SNP	SLC38A4	ENST00000266579	human	ensembl	74_37	-1	known	missense	c.875	p.R292H	0.000	NULL	pfam_AA_transpt_TM	-	no_errors	SLC38A4	HGNC	ENSG00000139209				27	0	0.00	35	2	5.41
SLC41A1	0	genome.wustl.edu	37	1	205779531	205779531	+	Silent	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	1	205779531	205779531	C	T	SNP	SLC41A1	ENST00000367137	human	ensembl	74_37	-1	known	silent	c.39	p.L13	1.000	NULL	pfam_SLC41_membr_dom	-	no_errors	SLC41A1	HGNC	ENSG00000133065	tier1	-	-	43	0	0.00	21	7	25.00
SLC6A13	0	genome.wustl.edu	37	12	369020	369020	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	12	369020	369020	C	T	SNP	SLC6A13	ENST00000343164	human	ensembl	74_37	-1	known	missense	c.199	p.G67R	1.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_GABA_GAT2	-	no_errors	SLC6A13	HGNC	ENSG00000010379				39	0	0.00	32	3	8.57
SLC6A9	0	genome.wustl.edu	37	1	44466463	44466463	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	1	44466463	44466463	G	T	SNP	SLC6A9	ENST00000372306	human	ensembl	74_37	-1	putative	missense	c.1600	p.L534I	0.933	NULL	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_glycine_GLY1	-	no_errors	SLC6A9	HGNC	ENSG00000196517				74	0	0.00	70	4	5.41
SLC7A5	0	genome.wustl.edu	37	16	87885450	87885450	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	16	87885450	87885450	G	T	SNP	SLC7A5	ENST00000261622	human	ensembl	74_37	-1	known	missense	c.544	p.L182I	1.000	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1,tigrfam_L_AA_transporter	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1,tigrfam_L_AA_transporter	-	no_errors	SLC7A5	HGNC	ENSG00000103257				85	0	0.00	48	4	7.69
SLC9A4	0	genome.wustl.edu	37	2	103141605	103141605	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	2	103141605	103141605	G	T	SNP	SLC9A4	ENST00000295269	human	ensembl	74_37	+1	known	missense	c.1941	p.W647C	0.998	NULL	pfam_Cation/H_exchanger,prints_NaH_exchanger,prints_Na/H_exchanger_2,tigrfam_NaH_exchanger	-	no_errors	SLC9A4	HGNC	ENSG00000180251	tier1	-	-	41	0	0.00	21	3	12.50
SLIT2	0	genome.wustl.edu	37	4	20552484	20552484	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	4	20552484	20552484	G	A	SNP	SLIT2	ENST00000504154	human	ensembl	74_37	+1	known	missense	c.2524	p.E842K	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_EG-like_dom,pfam_Laminin_G,pfam_Leu-rich_rpt,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl_sf,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Fol_N,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT2	HGNC	ENSG00000145147	tier1	-	-	30	0	0.00	28	6	17.65
SLIT2	0	genome.wustl.edu	37	4	20620418	20620418	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	4	20620418	20620418	G	C	SNP	SLIT2	ENST00000504154	human	ensembl	74_37	+1	known	missense	c.4376	p.R1459T	1.000	smart_Cys_knot_C,pfscan_Cys_knot_C	pfam_EG-like_dom,pfam_Laminin_G,pfam_Leu-rich_rpt,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl_sf,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Fol_N,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT2	HGNC	ENSG00000145147				31	0	0.00	20	5	20.00
SMOC2	0	genome.wustl.edu	37	6	169053824	169053824	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	6	169053824	169053824	G	A	SNP	SMOC2	ENST00000354536	human	ensembl	74_37	+1	known	missense	c.1234	p.D412N	1.000	pfam_SPARC/Testican_Ca-bd-dom,pfscan_EF_hand_dom	pfam_Thyroglobulin_1,pfam_SPARC/Testican_Ca-bd-dom,pfam_Kazal_dom,superfamily_Thyroglobulin_1,smart_Kazal_dom,smart_Thyroglobulin_1,pfscan_EF_hand_dom,pfscan_Thyroglobulin_1	-	no_errors	SMOC2	HGNC	ENSG00000112562	tier1	-	-	95	0	0.00	58	9	13.43
SOX11	0	genome.wustl.edu	37	2	5832933	5832933	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	2	5832933	5832933	T	G	SNP	SOX11	ENST00000322002	human	ensembl	74_37	+1	known	missense	c.80	p.M27R	1.000	pirsf_SOX-12/11/4a	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pirsf_SOX-12/11/4a,pfscan_HMG_box_dom	-	no_errors	SOX11	HGNC	ENSG00000176887	tier1	-	-	74	0	0.00	66	5	7.04
SPAG17	0	genome.wustl.edu	37	1	118558800	118558801	+	Frame_Shift_Del	DEL	TT	TT	-			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	1	118558800	118558801	TT	-	DEL	SPAG17	ENST00000336338	human	ensembl	74_37	-1	known	frame_shift_del	c.4075_4074	p.H1360fs	0.965:0.981	NULL	NULL	-	no_errors	SPAG17	HGNC	ENSG00000155761	tier1			37	0	0.00	27	8	22.86
SPATC1	0	genome.wustl.edu	37	8	145095594	145095594	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	8	145095594	145095594	G	A	SNP	SPATC1	ENST00000377470	human	ensembl	74_37	+1	known	missense	c.892	p.A298T	0.037	NULL	NULL	-	no_errors	SPATC1	HGNC	ENSG00000186583				68	0	0.00	68	4	5.56
SPIN4	0	genome.wustl.edu	37	X	62570563	62570563	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	X	62570563	62570563	G	T	SNP	SPIN4	ENST00000335144	human	ensembl	74_37	-1	known	missense	c.136	p.Q46K	1.000	pfam_Spin_Ssty	pfam_Spin_Ssty	-	no_errors	SPIN4	HGNC	ENSG00000186767	tier1	-	-	55	0	0.00	38	9	18.75
SPTBN5	0	genome.wustl.edu	37	15	42144894	42144894	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	15	42144894	42144894	G	T	SNP	SPTBN5	ENST00000320955	human	ensembl	74_37	-1	known	missense	c.10387	p.Q3463K	0.346	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN5	HGNC	ENSG00000137877	tier1	-	-	50	0	0.00	31	4	11.43
SSTR5	0	genome.wustl.edu	37	16	1129139	1129140	+	In_Frame_Ins	INS	-	-	TGT			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	16	1129139	1129140	-	TGT	INS	SSTR5	ENST00000293897	human	ensembl	74_37	+1	known	in_frame_ins	c.271_272	p.92in_frame_insL	0.998:1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Somatstn_rcpt_5,prints_Somatstn_rcpt,prints_Opioid_rcpt,prints_NPY_rcpt	-	no_errors	SSTR5	HGNC	ENSG00000162009	tier1			49	0	0.00	35	9	20.45
ST14	0	genome.wustl.edu	37	11	130058798	130058798	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	11	130058798	130058798	G	T	SNP	ST14	ENST00000278742	human	ensembl	74_37	+1	known	missense	c.404	p.G135V	1.000	pirsf_Peptidase_S1A_matripase,pfam_SEA_dom	pirsf_Peptidase_S1A_matripase,pfam_Peptidase_S1,pfam_LDrepeatLR_classA_rpt,pfam_CUB_dom,pfam_SEA_dom,superfamily_Trypsin-like_Pept_dom,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_LDrepeatLR_classA_rpt,smart_Peptidase_S1,prints_LDrepeatLR_classA_rpt,prints_Peptidase_S1A,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_Peptidase_S1	-	no_errors	ST14	HGNC	ENSG00000149418	tier1	-	-	67	0	0.00	56	4	6.67
STAM2	0	genome.wustl.edu	37	2	153004816	153004817	+	Splice_Site	INS	-	-	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	2	153004816	153004817	-	A	INS	STAM2	ENST00000263904	human	ensembl	74_37	-1	known	splice_site_ins	c.126-3_126-2	e3-2	1.000:0.002	-	-	-	no_errors	STAM2	HGNC	ENSG00000115145	tier1			28	0	0.00	26	2	7.14
STAU2-AS1	0	genome.wustl.edu	37	8	74332341	74332341	+	RNA	SNP	G	G	C			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	8	74332341	74332341	G	C	SNP	STAU2-AS1	ENST00000517604	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.991	-	-	-	no_errors	STAU2-AS1	HGNC	ENSG00000253302	tier1	-	-	48	0	0.00	30	11	26.83
STK11	0	genome.wustl.edu	37	19	1206968	1206968	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	19	1206968	1206968	C	T	SNP	STK11	ENST00000326873	human	ensembl	74_37	+1	known	missense	c.56	p.S19L	0.997	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	STK11	HGNC	ENSG00000118046				40	0	0.00	20	2	9.09
SUPT6H	0	genome.wustl.edu	37	17	27002162	27002162	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	17	27002162	27002162	G	T	SNP	SUPT6H	ENST00000314616	human	ensembl	74_37	+1	known	nonsense	c.520	p.E174*	1.000	pirsf_TF_Spt6	pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_SH2,superfamily_NA-bd_OB-fold,smart_YqgF/RNaseH-like_dom,smart_RNA-binding_domain_S1,smart_SH2,pirsf_TF_Spt6,pfscan_SH2,pfscan_Rbsml_prot_S1_RNA-bd_dom	-	no_errors	SUPT6H	HGNC	ENSG00000109111				11	0	0.00	26	2	7.14
SUPT7L	0	genome.wustl.edu	37	2	27883883	27883883	+	Silent	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	2	27883883	27883883	G	T	SNP	SUPT7L	ENST00000337768	human	ensembl	74_37	-1	known	silent	c.387	p.I129	0.879	NULL	pfam_BTP,smart_BTP	-	no_errors	SUPT7L	HGNC	ENSG00000119760	tier1	-	-	46	0	0.00	54	4	6.90
SUV420H1	0	genome.wustl.edu	37	11	67934523	67934523	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	11	67934523	67934523	C	T	SNP	SUV420H1	ENST00000304363	human	ensembl	74_37	-1	known	missense	c.1100	p.S367N	1.000	NULL	pfam_SET_dom,smart_SET_dom,pfscan_SET_dom	-	no_errors	SUV420H1	HGNC	ENSG00000110066	tier1	-	-	63	0	0.00	43	11	20.37
SYNE1	0	genome.wustl.edu	37	6	152730801	152730801	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	6	152730801	152730801	G	T	SNP	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	missense	c.6274	p.Q2092K	1.000	superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018	tier1	-	-	23	0	0.00	30	4	11.76
SYNE2	0	genome.wustl.edu	37	14	64532290	64532290	+	Silent	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	14	64532290	64532290	G	T	SNP	SYNE2	ENST00000358025	human	ensembl	74_37	+1	known	silent	c.10353	p.L3451	0.802	NULL	pfam_CH-domain,pfam_KASH,pfam_Spectrin_repeat,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE2	HGNC	ENSG00000054654	tier1	-	-	58	0	0.00	58	4	6.45
SYT7	0	genome.wustl.edu	37	11	61286123	61286123	+	Silent	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	11	61286123	61286123	G	T	SNP	SYT7	ENST00000263846	human	ensembl	74_37	-1	known	silent	c.1188	p.A396	1.000	superfamily_C2_dom,smart_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_Synaptotagmin,prints_C2_dom	-	no_errors	SYT7	HGNC	ENSG00000011347	tier1	-	-	82	0	0.00	74	13	14.94
TAF6L	0	genome.wustl.edu	37	11	62549740	62549740	+	Silent	SNP	C	C	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	11	62549740	62549740	C	A	SNP	TAF6L	ENST00000294168	human	ensembl	74_37	+1	known	silent	c.762	p.I254	1.000	pfam_DUF1546	pfam_TAF_TATA-bd,pfam_DUF1546,superfamily_Histone-fold,smart_TAF_TATA-bd	-	no_errors	TAF6L	HGNC	ENSG00000162227				56	0	0.00	31	2	6.06
TAS2R30	0	genome.wustl.edu	37	12	11286713	11286713	+	Missense_Mutation	SNP	A	A	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	12	11286713	11286713	A	T	SNP	TAS2R30	ENST00000539585	human	ensembl	74_37	-1	known	missense	c.131	p.V44D	0.000	pfam_TAS2_rcpt	pfam_TAS2_rcpt	-	no_errors	TAS2R30	HGNC	ENSG00000256188	tier1	-	-	74	0	0.00	53	21	28.38
TAS2R30	0	genome.wustl.edu	37	12	11286714	11286714	+	Missense_Mutation	SNP	C	C	G			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	12	11286714	11286714	C	G	SNP	TAS2R30	ENST00000539585	human	ensembl	74_37	-1	known	missense	c.130	p.V44L	0.000	pfam_TAS2_rcpt	pfam_TAS2_rcpt	-	no_errors	TAS2R30	HGNC	ENSG00000256188	tier1	-	-	74	0	0.00	53	22	29.33
TBC1D32	0	genome.wustl.edu	37	6	121655552	121655552	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	6	121655552	121655552	G	T	SNP	TBC1D32	ENST00000464622	human	ensembl	74_37	-1	known	missense	c.25	p.Q9K	0.999	NULL	NULL	-	no_errors	TBC1D32	HGNC	ENSG00000146350	tier1	-	-	59	0	0.00	23	16	41.03
TCERG1	0	genome.wustl.edu	37	5	145834808	145834808	+	Silent	SNP	A	A	G			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	5	145834808	145834808	A	G	SNP	TCERG1	ENST00000296702	human	ensembl	74_37	+1	known	silent	c.249	p.G83	0.999	NULL	pfam_FF_domain,pfam_WW_dom,superfamily_FF_domain,superfamily_WW_dom,smart_WW_dom,smart_FF_domain,pfscan_WW_dom	-	no_errors	TCERG1	HGNC	ENSG00000113649	tier1	-	-	70	0	0.00	39	18	31.58
TENC1	0	genome.wustl.edu	37	12	53457660	53457660	+	Frame_Shift_Del	DEL	A	A	-			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	12	53457660	53457660	A	-	DEL	TENC1	ENST00000314276	human	ensembl	74_37	+1	known	frame_shift_del	c.4254	p.K1419fs	0.996	smart_PTB/PI_dom	pfam_PTB,pfam_Tensin_phosphatase_C2-dom,pfam_SH2,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_SH2,smart_PTB/PI_dom,pfscan_SH2,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TENC1	HGNC	ENSG00000111077	tier1			29	0	0.00	22	2	8.33
TINAG	0	genome.wustl.edu	37	6	54212285	54212285	+	Missense_Mutation	SNP	A	A	G			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	6	54212285	54212285	A	G	SNP	TINAG	ENST00000259782	human	ensembl	74_37	+1	known	missense	c.869	p.D290G	1.000	pfam_Peptidase_C1A_C,smart_Peptidase_C1A_C	pfam_Peptidase_C1A_C,pfam_Somatomedin_B_dom,smart_Somatomedin_B_dom,smart_Peptidase_C1A_C,pfscan_Somatomedin_B_dom	-	no_errors	TINAG	HGNC	ENSG00000137251	tier1	-	-	67	0	0.00	24	28	53.85
TLE2	0	genome.wustl.edu	37	19	3006510	3006510	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	19	3006510	3006510	G	C	SNP	TLE2	ENST00000262953	human	ensembl	74_37	-1	known	missense	c.1408	p.Q470E	0.999	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_Groucho/TLE_N,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,prints_Groucho_enhance,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	TLE2	HGNC	ENSG00000065717	tier1	-	-	114	0	0.00	38	20	34.48
TLN2	0	genome.wustl.edu	37	15	62945485	62945485	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	15	62945485	62945485	G	T	SNP	TLN2	ENST00000306829	human	ensembl	74_37	+1	known	missense	c.489	p.L163F	1.000	pfam_FERM_N,smart_Band_41_domain,pfscan_FERM_domain	pfam_Talin_cent,pfam_ILWEQ_dom,pfam_Vinculin-bd_dom,pfam_FERM_N,pfam_FERM_central,pfam_Insln_rcpt_S1,superfamily_Talin_cent,superfamily_Vinculin/catenin,superfamily_FERM_central,smart_Band_41_domain,smart_ILWEQ_dom,pfscan_FERM_domain,pfscan_ILWEQ_dom	-	no_errors	TLN2	HGNC	ENSG00000171914	tier1	-	-	42	0	0.00	47	11	18.97
TMEM145	0	genome.wustl.edu	37	19	42821103	42821103	+	Missense_Mutation	SNP	C	C	G			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	19	42821103	42821103	C	G	SNP	TMEM145	ENST00000301204	human	ensembl	74_37	+1	known	missense	c.888	p.I296M	1.000	pfam_Intimal_thickness-rel_rcpt	pfam_Intimal_thickness-rel_rcpt	-	no_errors	TMEM145	HGNC	ENSG00000167619				61	0	0.00	25	3	10.71
TMEM45A	0	genome.wustl.edu	37	3	100295818	100295818	+	Missense_Mutation	SNP	C	C	G			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	3	100295818	100295818	C	G	SNP	TMEM45A	ENST00000323523	human	ensembl	74_37	+1	known	missense	c.784	p.L262V	1.000	NULL	pfam_DUF716_TMEM45	-	no_errors	TMEM45A	HGNC	ENSG00000181458	tier1	-	-	26	0	0.00	31	18	36.73
TMEM57	0	genome.wustl.edu	37	1	25785138	25785138	+	Silent	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	1	25785138	25785138	G	T	SNP	TMEM57	ENST00000374343	human	ensembl	74_37	+1	known	silent	c.909	p.V303	1.000	pfam_Macoilin	pfam_Macoilin,superfamily_Prefoldin	-	no_errors	TMEM57	HGNC	ENSG00000204178				14	0	0.00	34	2	5.56
TOLLIP	0	genome.wustl.edu	37	11	1307298	1307298	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	11	1307298	1307298	G	A	SNP	TOLLIP	ENST00000317204	human	ensembl	74_37	-1	known	missense	c.544	p.P182S	0.998	superfamily_C2_dom	pfam_CUE,pfam_C2_dom,superfamily_C2_dom,superfamily_UBA-like,smart_C2_dom,smart_CUE,pfscan_CUE	-	no_errors	TOLLIP	HGNC	ENSG00000078902	tier1	-	-	35	0	0.00	15	3	16.67
TP53	0	genome.wustl.edu	37	17	7577022	7577022	+	Nonsense_Mutation	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	17	7577022	7577022	G	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	nonsense	c.916	p.R306*	1.000	NULL	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	rs121913344	-	82	0	0.00	38	12	24.00
TP53	0	genome.wustl.edu	37	17	7578439	7578439	+	Frame_Shift_Del	DEL	T	T	-			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	17	7578439	7578439	T	-	DEL	TP53	ENST00000269305	human	ensembl	74_37	-1	known	frame_shift_del	c.491	p.K164fs	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1			37	0	0.00	18	11	37.93
TPO	0	genome.wustl.edu	37	2	1459852	1459852	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	2	1459852	1459852	G	T	SNP	TPO	ENST00000329066	human	ensembl	74_37	+1	known	missense	c.617	p.R206L	1.000	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal	pfam_Haem_peroxidase_animal,pfam_EGF-like_Ca-bd_dom,superfamily_Haem_peroxidase,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Sushi_SCR_CCP,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr	-	no_errors	TPO	HGNC	ENSG00000115705	tier1	-	-	37	0	0.00	17	14	45.16
TPRXL	0	genome.wustl.edu	37	3	14106011	14106012	+	In_Frame_Ins	INS	-	-	CAG			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	3	14106011	14106012	-	CAG	INS	TPRXL	ENST00000326972	human	ensembl	74_37	+1	known	in_frame_ins	c.335_336	p.116in_frame_insS	0.001:0.001	NULL	NULL	-	no_errors	TPRXL	HGNC	ENSG00000180438	tier1			28	0	0.00	4	5	55.56
TSHB	0	genome.wustl.edu	37	1	115576687	115576687	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	1	115576687	115576687	G	T	SNP	TSHB	ENST00000256592	human	ensembl	74_37	+1	known	nonsense	c.256	p.G86*	1.000	pfam_Cys_knot,smart_Gonadotropin_bsu	pfam_Cys_knot,smart_Gonadotropin_bsu	-	no_errors	TSHB	HGNC	ENSG00000134200	tier1	-	-	58	0	0.00	44	4	8.33
TTLL7	0	genome.wustl.edu	37	1	84376889	84376889	+	Missense_Mutation	SNP	T	T	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	1	84376889	84376889	T	A	SNP	TTLL7	ENST00000260505	human	ensembl	74_37	-1	known	missense	c.1745	p.N582I	0.002	NULL	pfam_TTL/TTLL_fam	-	no_errors	TTLL7	HGNC	ENSG00000137941	tier1	-	-	32	0	0.00	19	7	26.92
TTN	0	genome.wustl.edu	37	2	179443596	179443596	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	2	179443596	179443596	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.60457	p.E20153K	1.000	pfam_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	33	0	0.00	27	9	25.00
TTN	0	genome.wustl.edu	37	2	179647024	179647024	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	2	179647024	179647024	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.3295	p.V1099M	0.139	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	34	0	0.00	21	13	38.24
TXNDC2	0	genome.wustl.edu	37	18	9886734	9886734	+	Silent	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	18	9886734	9886734	C	T	SNP	TXNDC2	ENST00000306084	human	ensembl	74_37	+1	known	silent	c.258	p.G86	0.000	NULL	pfam_Thioredoxin_domain,pfam_Glutenin,superfamily_Thioredoxin-like_fold	-	no_errors	TXNDC2	HGNC	ENSG00000168454				73	0	0.00	52	3	5.45
UMOD	0	genome.wustl.edu	37	16	20355414	20355414	+	Silent	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	16	20355414	20355414	G	T	SNP	UMOD	ENST00000424589	human	ensembl	74_37	-1	known	silent	c.1362	p.I454	0.932	pfam_ZP_dom,smart_ZP_dom,pfscan_ZP_dom	pfam_ZP_dom,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_ZP_dom,pfscan_EG-like_dom,pfscan_ZP_dom,prints_ZP_dom	-	no_errors	UMOD	HGNC	ENSG00000169344	tier1	-	-	33	0	0.00	30	4	11.76
USP2	0	genome.wustl.edu	37	11	119234618	119234618	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	11	119234618	119234618	G	T	SNP	USP2	ENST00000525735	human	ensembl	74_37	-1	known	missense	c.88	p.P30T	1.000	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP2	HGNC	ENSG00000036672				91	0	0.00	63	4	5.97
USP34	0	genome.wustl.edu	37	2	61433937	61433937	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	2	61433937	61433937	G	T	SNP	USP34	ENST00000398571	human	ensembl	74_37	-1	known	missense	c.9004	p.L3002I	1.000	superfamily_ARM-type_fold	pfam_Peptidase_C19/C67,superfamily_ARM-type_fold,pfscan_Peptidase_C19/C67	-	no_errors	USP34	HGNC	ENSG00000115464				61	0	0.00	37	2	5.13
VAX2	0	genome.wustl.edu	37	2	71160086	71160086	+	Frame_Shift_Del	DEL	G	G	-			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	2	71160086	71160086	G	-	DEL	VAX2	ENST00000234392	human	ensembl	74_37	+1	known	frame_shift_del	c.625	p.G209fs	0.029	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	VAX2	HGNC	ENSG00000116035	tier1			88	0	0.00	30	13	30.23
VDAC1	0	genome.wustl.edu	37	5	133309491	133309491	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	5	133309491	133309491	G	T	SNP	VDAC1	ENST00000265333	human	ensembl	74_37	-1	known	missense	c.751	p.L251I	1.000	pfam_Porin_Euk/Tom40,prints_Porin_Euk	pfam_Porin_Euk/Tom40,prints_Porin_Euk	-	no_errors	VDAC1	HGNC	ENSG00000213585				56	0	0.00	56	4	6.67
WDR45	0	genome.wustl.edu	37	X	48935401	48935401	+	Nonsense_Mutation	SNP	C	C	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	X	48935401	48935401	C	A	SNP	WDR45	ENST00000322995	human	ensembl	74_37	-1	known	nonsense	c.136	p.E46*	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	-	no_errors	WDR45	HGNC	ENSG00000196998	tier1	-	-	50	0	0.00	21	8	27.59
WNT8B	0	genome.wustl.edu	37	10	102241743	102241743	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	10	102241743	102241743	G	C	SNP	WNT8B	ENST00000343737	human	ensembl	74_37	+1	known	missense	c.442	p.D148H	1.000	pfam_Wnt,smart_Wnt	pfam_Wnt,smart_Wnt,prints_Wnt,prints_Wnt8	-	no_errors	WNT8B	HGNC	ENSG00000075290	tier1	-	-	51	0	0.00	29	5	14.71
XPO1	0	genome.wustl.edu	37	2	61719279	61719279	+	Missense_Mutation	SNP	T	T	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	2	61719279	61719279	T	A	SNP	XPO1	ENST00000401558	human	ensembl	74_37	-1	known	missense	c.1778	p.Q593L	1.000	superfamily_ARM-type_fold	pfam_CRM1_C_dom,pfam_Exportin-1/Importin-b-like,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	-	no_errors	XPO1	HGNC	ENSG00000082898	tier1	-	-	37	0	0.00	33	13	28.26
ZC3H12C	0	genome.wustl.edu	37	11	110030138	110030138	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	11	110030138	110030138	G	T	SNP	ZC3H12C	ENST00000278590	human	ensembl	74_37	+1	known	missense	c.1071	p.R357S	1.000	pfam_RNase_Zc3h12	pfam_RNase_Zc3h12	-	no_errors	ZC3H12C	HGNC	ENSG00000149289	tier1	-	-	54	0	0.00	63	4	5.97
ZC3H15	0	genome.wustl.edu	37	2	187370557	187370557	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	2	187370557	187370557	G	T	SNP	ZC3H15	ENST00000337859	human	ensembl	74_37	+1	known	missense	c.955	p.G319C	0.821	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H15	HGNC	ENSG00000065548	tier1	-	-	54	0	0.00	38	4	9.52
ZCCHC11	0	genome.wustl.edu	37	1	52897011	52897011	+	Missense_Mutation	SNP	T	T	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	1	52897011	52897011	T	A	SNP	ZCCHC11	ENST00000257177	human	ensembl	74_37	-1	known	missense	c.4385	p.Q1462L	1.000	NULL	pfam_PAP_assoc,pfam_Znf_CCHC,pfam_Nucleotidyltransferase,superfamily_Znf_CCHC,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC11	HGNC	ENSG00000134744	tier1	-	-	62	0	0.00	51	21	29.17
ZDHHC15	0	genome.wustl.edu	37	X	74644566	74644566	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	X	74644566	74644566	C	A	SNP	ZDHHC15	ENST00000373361	human	ensembl	74_37	-1	known	missense	c.536	p.W179L	1.000	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC15	HGNC	ENSG00000102383	tier1	-	-	63	0	0.00	26	18	40.91
ZNF212	0	genome.wustl.edu	37	7	148947553	148947553	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	7	148947553	148947553	C	T	SNP	ZNF212	ENST00000335870	human	ensembl	74_37	+1	known	missense	c.328	p.R110W	1.000	pfam_DUF3669_Znf	pfam_Znf_C2H2,pfam_DUF3669_Znf,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF212	HGNC	ENSG00000170260	tier1	-	-	88	0	0.00	32	4	11.11
ZNF259	0	genome.wustl.edu	37	11	116653716	116653716	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	11	116653716	116653716	C	A	SNP	ZNF259	ENST00000227322	human	ensembl	74_37	-1	known	missense	c.1011	p.E337D	1.000	pfam_Znf_ZPR1,smart_Znf_ZPR1,tigrfam_Znf_ZPR1	pfam_Znf_ZPR1,smart_Znf_ZPR1,tigrfam_Znf_ZPR1	-	no_errors	ZNF259	HGNC	ENSG00000109917				57	0	0.00	42	3	6.67
ZNF33A	0	genome.wustl.edu	37	10	38344263	38344263	+	Missense_Mutation	SNP	A	A	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	10	38344263	38344263	A	T	SNP	ZNF33A	ENST00000432900	human	ensembl	74_37	+1	known	missense	c.1229	p.Q410L	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF33A	HGNC	ENSG00000189180	tier1	-	-	63	0	0.00	59	15	20.27
ZNF385A	0	genome.wustl.edu	37	12	54767829	54767829	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	12	54767829	54767829	C	T	SNP	ZNF385A	ENST00000338010	human	ensembl	74_37	-1	known	missense	c.349	p.V117I	0.016	NULL	pfam_Znf_C2H2_jaz,smart_Znf_U1,smart_Znf_C2H2-like	-	no_errors	ZNF385A	HGNC	ENSG00000161642	tier1	rs201286538	-	80	0	0.00	46	17	26.98
ZNF395	0	genome.wustl.edu	37	8	28206730	28206730	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	8	28206730	28206730	G	T	SNP	ZNF395	ENST00000344423	human	ensembl	74_37	-1	known	missense	c.1342	p.L448I	0.959	NULL	pfscan_Znf_C2H2	-	no_errors	ZNF395	HGNC	ENSG00000186918	tier1	-	-	49	0	0.00	32	4	11.11
ZNF587B	0	genome.wustl.edu	37	19	58352946	58352946	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	19	58352946	58352946	G	C	SNP	ZNF587B	ENST00000442832	human	ensembl	74_37	+1	known	missense	c.904	p.E302Q	0.014	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF587B	HGNC	ENSG00000269343	tier1	-	-	101	0	0.00	58	25	29.76
ZNF638	0	genome.wustl.edu	37	2	71626765	71626765	+	Silent	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	2	71626765	71626765	G	T	SNP	ZNF638	ENST00000264447	human	ensembl	74_37	+1	known	silent	c.2577	p.V859	0.101	NULL	pfam_RRM_dom,smart_Znf_U1,smart_Znf_C2H2-like,smart_RRM_dom,pfscan_Znf_C2H2_matrin,pfscan_RRM_dom	-	no_errors	ZNF638	HGNC	ENSG00000075292	tier1	-	-	86	0	0.00	53	5	8.62
ZNF646	0	genome.wustl.edu	37	16	31088424	31088424	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	16	31088424	31088424	G	T	SNP	ZNF646	ENST00000300850	human	ensembl	74_37	+1	known	missense	c.779	p.S260I	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF646	HGNC	ENSG00000167395				60	0	0.00	36	4	10.00
ZNF676	0	genome.wustl.edu	37	19	22363643	22363643	+	Silent	SNP	C	C	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	19	22363643	22363643	C	T	SNP	ZNF676	ENST00000397121	human	ensembl	74_37	-1	known	silent	c.876	p.S292	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF676	HGNC	ENSG00000196109				37	0	0.00	31	2	6.06
ZNF700	0	genome.wustl.edu	37	19	12060674	12060674	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	19	12060674	12060674	G	T	SNP	ZNF700	ENST00000254321	human	ensembl	74_37	+1	known	missense	c.1835	p.R612M	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF700	HGNC	ENSG00000196757	tier1	-	-	56	0	0.00	61	4	6.15
ZNF733P	0	genome.wustl.edu	37	7	62752571	62752571	+	RNA	SNP	T	T	G			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	7	62752571	62752571	T	G	SNP	ZNF733P	ENST00000331425	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.823	-	-	-	no_errors	ZNF733P	HGNC	ENSG00000185037				54	0	0.00	40	8	16.67
ZNF808	0	genome.wustl.edu	37	19	53058173	53058173	+	Nonsense_Mutation	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	19	53058173	53058173	G	A	SNP	ZNF808	ENST00000359798	human	ensembl	74_37	+1	known	nonsense	c.2004	p.W668*	0.022	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF808	HGNC	ENSG00000198482	tier1	-	-	79	0	0.00	67	4	5.63
ZNF831	0	genome.wustl.edu	37	20	57767928	57767928	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	20	57767928	57767928	G	C	SNP	ZNF831	ENST00000371030	human	ensembl	74_37	+1	novel	missense	c.1854	p.E618D	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF831	HGNC	ENSG00000124203	tier1	-	-	36	0	0.00	8	5	38.46
ZNF846	0	genome.wustl.edu	37	19	9869432	9869432	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	19	9869432	9869432	G	T	SNP	ZNF846	ENST00000397902	human	ensembl	74_37	-1	known	missense	c.321	p.S107R	0.094	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,smart_Znf_BED_prd,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF846	HGNC	ENSG00000196605				30	0	0.00	27	2	6.90
ZSCAN5B	0	genome.wustl.edu	37	19	56701846	56701846	+	Missense_Mutation	SNP	C	C	G			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	19	56701846	56701846	C	G	SNP	ZSCAN5B	ENST00000358992	human	ensembl	74_37	-1	known	missense	c.838	p.A280P	0.003	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN5B	HGNC	ENSG00000197213	tier1	-	-	112	0	0.00	100	6	5.66
ZSCAN5C	0	genome.wustl.edu	37	19	56720253	56720253	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	19	56720253	56720253	G	A	SNP	ZSCAN5C	ENST00000376267	human	ensembl	74_37	+1	known	missense	c.1175	p.R392H	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN5C	HGNC	ENSG00000204532	tier1	-	-	74	0	0.00	35	9	20.45
ZSWIM3	0	genome.wustl.edu	37	20	44505581	44505581	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FD-01A-11D-A33E-09	TCGA-JY-A6FD-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	32802aaf-3f39-4e84-8523-63a8702ee946	79c13e3f-d511-4ccf-a158-558a49b00f43	20	44505581	44505581	G	T	SNP	ZSWIM3	ENST00000255152	human	ensembl	74_37	+1	known	missense	c.384	p.Q128H	0.972	NULL	pfam_Znf_SWIM,pfam_MULE_transposase_dom,pfam_Transposase,smart_Znf_PMZ,pfscan_Znf_SWIM	-	no_errors	ZSWIM3	HGNC	ENSG00000132801				36	0	0.00	31	3	8.82
