Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ABCA10	0	genome.wustl.edu	37	17	67218779	67218780	+	Frame_Shift_Ins	INS	-	-	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	17	67218779	67218780	-	T	INS	ABCA10	ENST00000269081	human	ensembl	74_37	-1	known	frame_shift_ins	c.94_93	p.Y31fs	0.000:0.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA10	HGNC	ENSG00000154263	tier1			77	0	0.00	76	37	32.74
ABCC8	0	genome.wustl.edu	37	11	17418754	17418754	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	11	17418754	17418754	T	G	SNP	ABCC8	ENST00000302539	human	ensembl	74_37	-1	known	missense	c.3977	p.Y1326S	1.000	superfamily_P-loop_NTPase	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,prints_Sulphorea_rcpt,prints_Surea_rcpt-1,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC8	HGNC	ENSG00000006071	tier1	-	-	53	0	0.00	15	14	48.28
ACACA	0	genome.wustl.edu	37	17	35518913	35518913	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	17	35518913	35518913	C	T	SNP	ACACA	ENST00000353139	human	ensembl	74_37	-1	known	missense	c.5131	p.G1711S	0.801	pfam_Carboxyl_trans	pfam_AcCoA_COase_cen,pfam_Carboxyl_trans,pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_lsu_N,pfam_Biotin_COase_C,pfam_Biotin_lipoyl,pfam_Dala_Dala_lig_C,pfam_ATP-grasp_carboxylate-amine,superfamily_PreATP-grasp_dom,superfamily_Rudment_hybrid_motif,superfamily_Single_hybrid_motif,smart_Biotin_COase_C,pfscan_ATP-grasp,pfscan_Biotin_carboxylation_dom,pfscan_COA_CT_N,pfscan_COA_CT_C,pfscan_Biotin_lipoyl	-	no_errors	ACACA	HGNC	ENSG00000132142	tier1	-	-	33	0	0.00	35	21	37.50
ADAR	0	genome.wustl.edu	37	1	154562755	154562755	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	1	154562755	154562755	G	A	SNP	ADAR	ENST00000292205	human	ensembl	74_37	-1	known	missense	c.2530	p.R844C	1.000	NULL	pfam_A_deamin,pfam_dsRNA_A_deaminase,pfam_dsRNA-bd_dom,smart_dsRNA_A_deaminase,smart_dsRNA-bd_dom,smart_A_deamin,pfscan_dsRNA-bd_dom,pfscan_dsRNA_A_deaminase,pfscan_A_deamin	-	no_errors	ADAR	HGNC	ENSG00000160710	tier1	-	-	86	0	0.00	50	34	40.48
ADAR	0	genome.wustl.edu	37	1	154569329	154569329	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	1	154569329	154569329	G	T	SNP	ADAR	ENST00000292205	human	ensembl	74_37	-1	known	missense	c.2351	p.A784D	1.000	pfam_dsRNA-bd_dom,smart_dsRNA-bd_dom,pfscan_dsRNA-bd_dom	pfam_A_deamin,pfam_dsRNA_A_deaminase,pfam_dsRNA-bd_dom,smart_dsRNA_A_deaminase,smart_dsRNA-bd_dom,smart_A_deamin,pfscan_dsRNA-bd_dom,pfscan_dsRNA_A_deaminase,pfscan_A_deamin	-	no_errors	ADAR	HGNC	ENSG00000160710				95	0	0.00	67	4	5.63
ADCY9	0	genome.wustl.edu	37	16	4016810	4016810	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	16	4016810	4016810	C	T	SNP	ADCY9	ENST00000294016	human	ensembl	74_37	-1	known	missense	c.3028	p.G1010R	1.000	NULL	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY9	HGNC	ENSG00000162104	tier1	-	-	52	0	0.00	22	22	50.00
ADRA1A	0	genome.wustl.edu	37	8	26721736	26721736	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	8	26721736	26721736	C	T	SNP	ADRA1A	ENST00000380586	human	ensembl	74_37	-1	known	missense	c.751	p.A251T	0.048	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_ADRA1A_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_ADRA1A_rcpt,prints_GPCR_Rhodpsn,prints_ADR_fam	-	no_errors	ADRA1A	HGNC	ENSG00000120907				69	0	0.00	36	2	5.26
AHCTF1	0	genome.wustl.edu	37	1	247016531	247016531	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	1	247016531	247016531	C	A	SNP	AHCTF1	ENST00000326225	human	ensembl	74_37	-1	known	missense	c.4452	p.E1484D	0.845	NULL	superfamily_Quinonprotein_ADH-like_supfam	-	no_errors	AHCTF1	HGNC	ENSG00000153207	tier1	-	-	27	0	0.00	15	14	48.28
AKAP6	0	genome.wustl.edu	37	14	32902973	32902973	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	14	32902973	32902973	C	A	SNP	AKAP6	ENST00000280979	human	ensembl	74_37	+1	known	missense	c.274	p.Q92K	1.000	NULL	smart_Spectrin/alpha-actinin	-	no_errors	AKAP6	HGNC	ENSG00000151320				36	0	0.00	28	2	6.67
ALMS1	0	genome.wustl.edu	37	2	73677770	73677770	+	Silent	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	2	73677770	73677770	C	A	SNP	ALMS1	ENST00000264448	human	ensembl	74_37	+1	known	silent	c.4113	p.G1371	0.000	NULL	NULL	-	no_errors	ALMS1	HGNC	ENSG00000116127	tier1	-	-	47	0	0.00	46	26	36.11
ALOX5	0	genome.wustl.edu	37	10	45920427	45920427	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	10	45920427	45920427	G	T	SNP	ALOX5	ENST00000374391	human	ensembl	74_37	+1	known	missense	c.681	p.W227C	1.000	pfam_LipOase_C,superfamily_LipOase_C	pfam_LipOase_C,pfam_PLAT/LH2_dom,superfamily_LipOase_C,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,prints_LipOase_mml,prints_LipOase_C,pfscan_PLAT/LH2_dom	-	no_errors	ALOX5	HGNC	ENSG00000012779	tier1	-	-	60	0	0.00	36	4	10.00
AMT	0	genome.wustl.edu	37	3	49459414	49459414	+	Splice_Site	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	3	49459414	49459414	C	T	SNP	AMT	ENST00000546031	human	ensembl	74_37	-1	known	splice_site	c.1+1	e0+1	0.001	-	-	-	no_errors	AMT	HGNC	ENSG00000145020	tier1	-	-	34	0	0.00	15	13	46.43
ANKRD11	0	genome.wustl.edu	37	16	89351637	89351637	+	Frame_Shift_Del	DEL	T	T	-			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	16	89351637	89351637	T	-	DEL	ANKRD11	ENST00000301030	human	ensembl	74_37	-1	known	frame_shift_del	c.1313	p.K438fs	0.636	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD11	HGNC	ENSG00000167522	tier1			16	0	0.00	6	5	45.45
ANKRD20A5P	0	genome.wustl.edu	37	18	14225656	14225657	+	RNA	INS	-	-	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	18	14225656	14225657	-	A	INS	ANKRD20A5P	ENST00000577614	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.354:0.398	-	-	-	no_errors	ANKRD20A5P	HGNC	ENSG00000186481	tier1			61	0	0.00	76	26	25.49
ANKRD27	0	genome.wustl.edu	37	19	33095327	33095327	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	19	33095327	33095327	C	A	SNP	ANKRD27	ENST00000306065	human	ensembl	74_37	-1	known	missense	c.2497	p.G833W	0.997	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	pfam_Ankyrin_rpt,pfam_VPS9,superfamily_Ankyrin_rpt-contain_dom,smart_VPS9_subgr,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_VPS9,prints_Ankyrin_rpt	-	no_errors	ANKRD27	HGNC	ENSG00000105186				54	0	0.00	33	2	5.71
ANKRD49	0	genome.wustl.edu	37	11	94231249	94231249	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	11	94231249	94231249	C	T	SNP	ANKRD49	ENST00000302755	human	ensembl	74_37	+1	known	missense	c.271	p.R91W	0.019	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD49	HGNC	ENSG00000168876				35	0	0.00	20	2	9.09
ANO2	0	genome.wustl.edu	37	12	5848531	5848531	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	12	5848531	5848531	C	A	SNP	ANO2	ENST00000356134	human	ensembl	74_37	-1	known	missense	c.1377	p.Q459H	1.000	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO2	HGNC	ENSG00000047617	tier1	-	-	57	0	0.00	55	4	6.67
ANXA4	0	genome.wustl.edu	37	2	70033579	70033579	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	2	70033579	70033579	G	T	SNP	ANXA4	ENST00000394295	human	ensembl	74_37	+1	known	missense	c.255	p.M85I	1.000	smart_Annexin_repeat,prints_Annexin,prints_AnnexinIV	pfam_Annexin_repeat,smart_Annexin_repeat,prints_Annexin,prints_AnnexinIV,prints_AnnexinV	-	no_errors	ANXA4	HGNC	ENSG00000196975	tier1	-	-	53	0	0.00	43	4	8.51
AOX2P	0	genome.wustl.edu	37	2	201619758	201619759	+	RNA	DEL	TG	TG	-			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	2	201619758	201619759	TG	-	DEL	AOX2P	ENST00000472376	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	AOX2P	HGNC	ENSG00000243478	tier1			20	0	0.00	23	3	11.54
AP2A1	0	genome.wustl.edu	37	19	50285877	50285877	+	Silent	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	19	50285877	50285877	C	A	SNP	AP2A1	ENST00000354293	human	ensembl	74_37	+1	known	silent	c.369	p.R123	1.000	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP2_complex_asu	pfam_Clathrin/coatomer_adapt-like_N,pfam_Clathrin_a-adaptin_app_sub_C,pfam_Clathrin_a/b/g-adaptin_app_Ig,superfamily_ARM-type_fold,superfamily_Coatomer/calthrin_app_sub_C,superfamily_Coatomer/clathrin_app_Ig-like,smart_Clathrin_a/b/g-adaptin_app_Ig,pirsf_AP2_complex_asu	-	no_errors	AP2A1	HGNC	ENSG00000196961	tier1	-	-	81	0	0.00	37	4	9.76
AP5M1	0	genome.wustl.edu	37	14	57752991	57752991	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	14	57752991	57752991	G	T	SNP	AP5M1	ENST00000261558	human	ensembl	74_37	+1	known	missense	c.1344	p.Q448H	1.000	pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C,pfscan_Clathrin_mu_C	pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C,pfscan_Clathrin_mu_C	-	no_errors	AP5M1	HGNC	ENSG00000053770	tier1	-	-	28	0	0.00	51	4	7.27
AQPEP	0	genome.wustl.edu	37	5	115298449	115298449	+	Silent	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	5	115298449	115298449	G	A	SNP	AQPEP	ENST00000357872	human	ensembl	74_37	+1	known	silent	c.135	p.P45	0.000	NULL	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	AQPEP	Uniprot_gn	ENSG00000172901				11	0	0.00	5	3	37.50
ARHGAP12	0	genome.wustl.edu	37	10	32109333	32109333	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	10	32109333	32109333	G	T	SNP	ARHGAP12	ENST00000344936	human	ensembl	74_37	-1	known	missense	c.1614	p.S538R	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,pfam_SH3_domain,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_WW_dom,smart_SH3_domain,smart_WW_dom,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_WW_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP12	HGNC	ENSG00000165322				32	0	0.00	53	4	7.02
ARHGAP26	0	genome.wustl.edu	37	5	142603672	142603673	+	RNA	INS	-	-	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	5	142603672	142603673	-	T	INS	ARHGAP26	ENST00000486650	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.938:0.929	-	-	-	no_errors	ARHGAP26	HGNC	ENSG00000145819	tier1			27	0	0.00	42	5	10.64
ARHGEF18	0	genome.wustl.edu	37	19	7505040	7505040	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	19	7505040	7505040	C	T	SNP	ARHGEF18	ENST00000359920	human	ensembl	74_37	+1	known	missense	c.214	p.R72C	0.074	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	ARHGEF18	HGNC	ENSG00000104880	tier1	-	-	104	0	0.00	41	29	41.43
ASPH	0	genome.wustl.edu	37	8	62577903	62577903	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	8	62577903	62577903	C	T	SNP	ASPH	ENST00000389204	human	ensembl	74_37	-1	known	missense	c.585	p.M195I	0.000	pfam_Asp-B-hydro/Triadin_dom	pfam_Asp-B-hydro/Triadin_dom	-	no_errors	ASPH	HGNC	ENSG00000198363	tier1	-	-	32	0	0.00	51	21	29.17
ASPSCR1	0	genome.wustl.edu	37	17	79954650	79954650	+	Silent	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	17	79954650	79954650	G	A	SNP	ASPSCR1	ENST00000306729	human	ensembl	74_37	+1	known	silent	c.861	p.S287	0.314	NULL	pfam_TUG/UBX4,pfam_UBX,pfscan_UBX	-	no_errors	ASPSCR1	HGNC	ENSG00000169696	tier1	-	-	212	0	0.00	66	37	35.92
ATAD2B	0	genome.wustl.edu	37	2	24090761	24090761	+	Silent	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	2	24090761	24090761	G	T	SNP	ATAD2B	ENST00000238789	human	ensembl	74_37	-1	known	silent	c.1132	p.R378	1.000	NULL	pfam_ATPase_AAA_core,pfam_Bromodomain,pfam_IstB_ATP-bd,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_AAA+_ATPase,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	ATAD2B	HGNC	ENSG00000119778				46	0	0.00	76	4	5.00
ATCAY	0	genome.wustl.edu	37	19	3907828	3907828	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	19	3907828	3907828	G	A	SNP	ATCAY	ENST00000301260	human	ensembl	74_37	+1	known	missense	c.455	p.R152H	1.000	pfam_Bcl2-/adenovirus-E1B	pfam_Bcl2-/adenovirus-E1B,pfam_CRAL-TRIO_dom,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom	-	no_errors	ATCAY	HGNC	ENSG00000167654	tier1	-	-	206	0	0.00	61	38	38.38
ATF7IP2	0	genome.wustl.edu	37	16	10575953	10575953	+	Silent	SNP	T	T	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	16	10575953	10575953	T	A	SNP	ATF7IP2	ENST00000356427	human	ensembl	74_37	+1	known	silent	c.1896	p.I632	0.996	superfamily_Fibronectin_type3	superfamily_Fibronectin_type3	-	no_errors	ATF7IP2	HGNC	ENSG00000166669	tier1	-	-	30	0	0.00	48	20	29.41
ATP5D	0	genome.wustl.edu	37	19	1244157	1244157	+	Silent	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	19	1244157	1244157	C	A	SNP	ATP5D	ENST00000215375	human	ensembl	74_37	+1	known	silent	c.357	p.A119	0.002	pfam_ATPase_F1-cplx_dsu/esu_N,superfamily_ATPase_F1-cplx_dsu/esu_N,tigrfam_ATPase_F1-cplx_dsu/esu	pfam_ATPase_F1-cplx_dsu/esu_N,superfamily_ATPase_F1-cplx_dsu/esu_N,superfamily_ATPase_F1_dsu/esu_C,tigrfam_ATPase_F1-cplx_dsu/esu	-	no_errors	ATP5D	HGNC	ENSG00000099624	tier1	-	-	180	0	0.00	65	24	26.67
ATP5F1	0	genome.wustl.edu	37	1	111996969	111996969	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	1	111996969	111996969	G	T	SNP	ATP5F1	ENST00000369722	human	ensembl	74_37	+1	known	missense	c.214	p.G72C	1.000	NULL	pfam_ATPase_B_chain/sub_B/MI25	-	no_errors	ATP5F1	HGNC	ENSG00000116459				32	0	0.00	32	2	5.88
ATP9A	0	genome.wustl.edu	37	20	50287676	50287676	+	Silent	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	20	50287676	50287676	C	T	SNP	ATP9A	ENST00000338821	human	ensembl	74_37	-1	known	silent	c.1158	p.S386	0.016	superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP9A	HGNC	ENSG00000054793	tier1	-	-	33	0	0.00	22	15	40.54
ATXN1	0	genome.wustl.edu	37	6	16328464	16328464	+	Silent	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	6	16328464	16328464	G	A	SNP	ATXN1	ENST00000244769	human	ensembl	74_37	-1	known	silent	c.78	p.S26	0.001	NULL	pfam_Ataxin-1_HBP1,pfam_Capicua_tscrpt_rep_mod,superfamily_Ataxin-1_HBP1,smart_Ataxin_AXH_dom,pfscan_Ataxin-1_HBP1	-	no_errors	ATXN1	HGNC	ENSG00000124788	tier1	-	-	50	0	0.00	16	6	27.27
BDP1	0	genome.wustl.edu	37	5	70791147	70791147	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	5	70791147	70791147	G	T	SNP	BDP1	ENST00000358731	human	ensembl	74_37	+1	known	nonsense	c.1711	p.E571*	0.045	NULL	superfamily_Homeodomain-like,smart_SANT/Myb	-	no_errors	BDP1	HGNC	ENSG00000145734	tier1	-	-	35	0	0.00	57	4	6.56
BEND4	0	genome.wustl.edu	37	4	42153694	42153694	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	4	42153694	42153694	G	T	SNP	BEND4	ENST00000502486	human	ensembl	74_37	-1	known	missense	c.467	p.A156D	1.000	NULL	pfam_BEN_domain	-	no_errors	BEND4	HGNC	ENSG00000188848	tier1	-	-	15	0	0.00	9	4	30.77
BIRC3	0	genome.wustl.edu	37	11	102198860	102198860	+	Missense_Mutation	SNP	A	A	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	11	102198860	102198860	A	G	SNP	BIRC3	ENST00000263464	human	ensembl	74_37	+1	known	missense	c.1031	p.Q344R	1.000	NULL	pfam_BIR,pfam_CARD,superfamily_DEATH-like_dom,smart_BIR,smart_CARD,smart_Znf_RING,pfscan_CARD,pfscan_BIR,pfscan_Znf_RING	-	no_errors	BIRC3	HGNC	ENSG00000023445				38	0	0.00	63	4	5.88
BMX	0	genome.wustl.edu	37	X	15549481	15549481	+	Missense_Mutation	SNP	T	T	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	X	15549481	15549481	T	A	SNP	BMX	ENST00000342014	human	ensembl	74_37	+1	known	missense	c.970	p.S324T	1.000	pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_Pleckstrin_homology,pfam_Znf_Btk_motif,superfamily_Kinase-like_dom,smart_Pleckstrin_homology,smart_Znf_Btk_motif,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_Znf_Btk_motif,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_Znf_Btk_motif	-	no_errors	BMX	HGNC	ENSG00000102010	tier1	-	-	41	0	0.00	21	27	56.25
BOLA1	0	genome.wustl.edu	37	1	149871805	149871805	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	1	149871805	149871805	G	T	SNP	BOLA1	ENST00000369150	human	ensembl	74_37	+1	known	nonsense	c.193	p.E65*	1.000	pfam_BolA,superfamily_BolA	pfam_BolA,superfamily_BolA	-	no_errors	BOLA1	HGNC	ENSG00000178096				72	0	0.00	36	2	5.26
BRPF1	0	genome.wustl.edu	37	3	9788006	9788006	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	3	9788006	9788006	G	A	SNP	BRPF1	ENST00000383829	human	ensembl	74_37	+1	known	missense	c.3347	p.R1116Q	1.000	pfam_PWWP_dom,smart_PWWP_dom,pfscan_PWWP_dom	pfam_Enhancer_polycomb-like_N,pfam_Bromodomain,pfam_PWWP_dom,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Bromodomain,smart_PWWP_dom,pfscan_PWWP_dom,pfscan_Znf_PHD-finger,pfscan_Znf_C2H2,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRPF1	HGNC	ENSG00000156983	tier1	-	-	93	0	0.00	53	9	14.52
BTNL9	0	genome.wustl.edu	37	5	180480869	180480869	+	RNA	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	5	180480869	180480869	C	T	SNP	BTNL9	ENST00000511589	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.003	-	-	-	no_errors	BTNL9	HGNC	ENSG00000165810	tier1	-	-	97	0	0.00	21	18	46.15
C11orf70	0	genome.wustl.edu	37	11	101946692	101946692	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	11	101946692	101946692	G	A	SNP	C11orf70	ENST00000434758	human	ensembl	74_37	+1	known	missense	c.524	p.C175Y	1.000	NULL	NULL	-	no_errors	C11orf70	HGNC	ENSG00000137691	tier1	-	-	38	0	0.00	49	17	25.76
C12orf66	0	genome.wustl.edu	37	12	64609598	64609598	+	Silent	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	12	64609598	64609598	C	T	SNP	C12orf66	ENST00000398055	human	ensembl	74_37	-1	known	silent	c.381	p.E127	1.000	pfam_DUF2003	pfam_DUF2003	-	no_errors	C12orf66	HGNC	ENSG00000174206	tier1	-	-	58	0	0.00	21	18	46.15
C14orf37	0	genome.wustl.edu	37	14	58471477	58471477	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	14	58471477	58471477	C	A	SNP	C14orf37	ENST00000267485	human	ensembl	74_37	-1	known	missense	c.2302	p.D768Y	1.000	NULL	NULL	-	no_errors	C14orf37	HGNC	ENSG00000139971	tier1	-	-	40	0	0.00	46	57	55.34
C15orf52	0	genome.wustl.edu	37	15	40631782	40631782	+	Frame_Shift_Del	DEL	C	C	-			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	15	40631782	40631782	C	-	DEL	C15orf52	ENST00000559313	human	ensembl	74_37	-1	known	frame_shift_del	c.294	p.M99fs	0.991	NULL	NULL	-	no_errors	C15orf52	HGNC	ENSG00000188549	tier1			36	0	0.00	23	2	8.00
C17orf80	0	genome.wustl.edu	37	17	71231802	71231802	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	17	71231802	71231802	G	T	SNP	C17orf80	ENST00000359042	human	ensembl	74_37	+1	known	missense	c.181	p.D61Y	0.002	NULL	NULL	-	no_errors	C17orf80	HGNC	ENSG00000141219	tier1	-	-	38	0	0.00	36	27	42.86
C18orf42	0	genome.wustl.edu	37	18	5145660	5145660	+	Silent	SNP	G	G	C			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	18	5145660	5145660	G	C	SNP	C18orf42	ENST00000434239	human	ensembl	74_37	-1	known	silent	c.111	p.V37	1.000	pfam_Kinase-A_anchor_RI-RII-bd_dom	pfam_Kinase-A_anchor_RI-RII-bd_dom	-	no_errors	C18orf42	HGNC	ENSG00000231824	tier1	-	-	38	0	0.00	23	14	37.84
C5orf20	0	genome.wustl.edu	37	5	134782217	134782217	+	Nonsense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	5	134782217	134782217	C	T	SNP	C5orf20	ENST00000503143	human	ensembl	74_37	-1	known	nonsense	c.582	p.W194*	0.000	NULL	NULL	-	no_errors	C5orf20	HGNC	ENSG00000251380	tier1	-	-	70	0	0.00	25	17	40.48
CACNA1C	0	genome.wustl.edu	37	12	2693763	2693763	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	12	2693763	2693763	G	T	SNP	CACNA1C	ENST00000399634	human	ensembl	74_37	+1	known	missense	c.2319	p.K773N	0.955	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCC_L_a1csu,prints_VDCCAlpha1,prints_VDCC_L_a1su	-	no_errors	CACNA1C	HGNC	ENSG00000151067	tier1	-	-	52	0	0.00	30	27	47.37
CACNA2D3	0	genome.wustl.edu	37	3	55038855	55038855	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	3	55038855	55038855	G	T	SNP	CACNA2D3	ENST00000288197	human	ensembl	74_37	+1	known	missense	c.2756	p.G919V	0.122	NULL	pfam_VWA_N,pfam_Cache_domain,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	CACNA2D3	HGNC	ENSG00000157445	tier1	-	-	42	0	0.00	42	4	8.70
CATSPERG	0	genome.wustl.edu	37	19	38845408	38845408	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	19	38845408	38845408	C	T	SNP	CATSPERG	ENST00000312265	human	ensembl	74_37	+1	known	missense	c.854	p.S285F	0.079	NULL	NULL	-	no_errors	CATSPERG	HGNC	ENSG00000099338	tier1	-	-	71	0	0.00	40	25	38.46
CCDC116	0	genome.wustl.edu	37	22	21991274	21991274	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	22	21991274	21991274	G	T	SNP	CCDC116	ENST00000292779	human	ensembl	74_37	+1	known	missense	c.1757	p.R586L	0.000	NULL	NULL	-	no_errors	CCDC116	HGNC	ENSG00000161180				38	0	0.00	37	2	5.13
CCDC178	0	genome.wustl.edu	37	18	30926332	30926332	+	Silent	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	18	30926332	30926332	G	T	SNP	CCDC178	ENST00000406524	human	ensembl	74_37	-1	known	silent	c.501	p.L167	0.093	NULL	NULL	-	no_errors	CCDC178	HGNC	ENSG00000166960				16	0	0.00	25	2	7.41
CCDC180	0	genome.wustl.edu	37	9	100092636	100092636	+	Frame_Shift_Del	DEL	A	A	-			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	9	100092636	100092636	A	-	DEL	CCDC180	ENST00000375202	human	ensembl	74_37	+1	known	frame_shift_del	c.1993	p.K666fs	0.001	NULL	NULL	-	no_errors	CCDC180	HGNC	ENSG00000197816	tier1			42	0	0.00	26	17	39.53
CCDC80	0	genome.wustl.edu	37	3	112324432	112324432	+	Silent	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	3	112324432	112324432	C	T	SNP	CCDC80	ENST00000206423	human	ensembl	74_37	-1	known	silent	c.2685	p.S895	0.843	NULL	NULL	-	no_errors	CCDC80	HGNC	ENSG00000091986	tier1	-	-	51	0	0.00	38	23	37.70
CCDC93	0	genome.wustl.edu	37	2	118704391	118704391	+	Missense_Mutation	SNP	T	T	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	2	118704391	118704391	T	A	SNP	CCDC93	ENST00000376300	human	ensembl	74_37	-1	known	missense	c.1292	p.E431V	0.898	NULL	pfam_DUF2037	-	no_errors	CCDC93	HGNC	ENSG00000125633	tier1	-	-	40	0	0.00	35	17	32.69
CD163L1	0	genome.wustl.edu	37	12	7528563	7528563	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	12	7528563	7528563	G	T	SNP	CD163L1	ENST00000313599	human	ensembl	74_37	-1	known	missense	c.2419	p.R807S	0.824	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_SRCR	-	no_errors	CD163L1	HGNC	ENSG00000177675				17	0	0.00	22	2	8.33
CD244	0	genome.wustl.edu	37	1	160811229	160811229	+	Silent	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	1	160811229	160811229	G	A	SNP	CD244	ENST00000368033	human	ensembl	74_37	-1	known	silent	c.441	p.D147	0.000	pfscan_Ig-like_dom	pfam_NK_rcpt_2B4_Ig_dom,pfscan_Ig-like_dom	-	no_errors	CD244	HGNC	ENSG00000122223	tier1	-	-	35	0	0.00	19	10	34.48
CD33	0	genome.wustl.edu	37	19	51728475	51728475	+	Silent	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	19	51728475	51728475	G	T	SNP	CD33	ENST00000262262	human	ensembl	74_37	+1	known	silent	c.39	p.G13	0.000	NULL	pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	CD33	HGNC	ENSG00000105383	tier1	-	-	76	0	0.00	25	12	32.43
CD46	0	genome.wustl.edu	37	1	207943560	207943560	+	RNA	SNP	T	T	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	1	207943560	207943560	T	A	SNP	CD46	ENST00000469535	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CD46	HGNC	ENSG00000117335	tier1	-	-	161	0	0.00	204	69	25.18
CDH23	0	genome.wustl.edu	37	10	73199634	73199634	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	10	73199634	73199634	G	T	SNP	CDH23	ENST00000461841	human	ensembl	74_37	+1	known	missense	c.181	p.V61L	0.419	NULL	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH23	HGNC	ENSG00000107736	tier1	-	-	62	0	0.00	37	4	9.76
CELSR1	0	genome.wustl.edu	37	22	46787549	46787549	+	Silent	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	22	46787549	46787549	G	A	SNP	CELSR1	ENST00000262738	human	ensembl	74_37	-1	known	silent	c.6129	p.V2043	1.000	smart_EGF_laminin,pfscan_EGF_laminin,pfscan_GPCR_2_extracellular_dom	pfam_Cadherin,pfam_DUF3497,pfam_Laminin_G,pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR1	HGNC	ENSG00000075275	tier1	-	-	94	0	0.00	48	5	9.43
CEP192	0	genome.wustl.edu	37	18	13049675	13049675	+	Missense_Mutation	SNP	A	A	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	18	13049675	13049675	A	G	SNP	CEP192	ENST00000506447	human	ensembl	74_37	+1	known	missense	c.2885	p.N962S	0.003	NULL	NULL	-	no_errors	CEP192	HGNC	ENSG00000101639	tier1	-	-	43	0	0.00	57	38	40.00
CFTR	0	genome.wustl.edu	37	7	117246747	117246747	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	7	117246747	117246747	C	A	SNP	CFTR	ENST00000003084	human	ensembl	74_37	+1	known	missense	c.2928	p.F976L	1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom,tigrfam_cAMP_cl_channel	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,prints_CysFib_conduc_TM,tigrfam_cAMP_cl_channel	-	no_errors	CFTR	HGNC	ENSG00000001626	tier1	-	-	39	0	0.00	40	23	36.51
CHD6	0	genome.wustl.edu	37	20	40033753	40033753	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	20	40033753	40033753	G	T	SNP	CHD6	ENST00000373233	human	ensembl	74_37	-1	known	missense	c.7628	p.A2543E	0.953	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_BRK_domain,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD6	HGNC	ENSG00000124177	tier1	-	-	30	0	0.00	17	9	34.62
CHSY1	0	genome.wustl.edu	37	15	101775550	101775550	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	15	101775550	101775550	G	T	SNP	CHSY1	ENST00000254190	human	ensembl	74_37	-1	known	missense	c.553	p.L185M	1.000	pfam_Fringe-like	pfam_Chond_GalNAc,pfam_Fringe-like	-	no_errors	CHSY1	HGNC	ENSG00000131873	tier1	-	-	50	0	0.00	47	4	7.69
CILP	0	genome.wustl.edu	37	15	65499281	65499281	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	15	65499281	65499281	C	T	SNP	CILP	ENST00000261883	human	ensembl	74_37	-1	known	missense	c.263	p.R88H	0.338	NULL	pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,superfamily_CarboxyPept-like_regulatory,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	CILP	HGNC	ENSG00000138615	tier1	-	-	84	0	0.00	49	4	7.55
CLEC16A	0	genome.wustl.edu	37	16	11097121	11097121	+	Missense_Mutation	SNP	A	A	C			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	16	11097121	11097121	A	C	SNP	CLEC16A	ENST00000409790	human	ensembl	74_37	+1	known	missense	c.1262	p.E421A	1.000	NULL	pfam_Uncharacterised_FPL	-	no_errors	CLEC16A	HGNC	ENSG00000038532	tier1	-	-	108	0	0.00	46	20	30.30
CLSTN3	0	genome.wustl.edu	37	12	7308935	7308936	+	RNA	DEL	TG	TG	-			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	12	7308935	7308936	TG	-	DEL	CLSTN3	ENST00000331148	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.062:0.004	-	-	-	no_errors	CLSTN3	HGNC	ENSG00000139182	tier1			39	0	0.00	32	2	5.88
CNOT3	0	genome.wustl.edu	37	19	54652456	54652456	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	19	54652456	54652456	C	A	SNP	CNOT3	ENST00000221232	human	ensembl	74_37	+1	known	missense	c.1384	p.H462N	1.000	pirsf_CCR4-NOT_su3/5	pfam_Not_N,pfam_NOT,pirsf_CCR4-NOT_su3/5	-	no_errors	CNOT3	HGNC	ENSG00000088038	tier1	-	-	95	0	0.00	38	4	9.52
COL11A1	0	genome.wustl.edu	37	1	103355076	103355076	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	1	103355076	103355076	G	C	SNP	COL11A1	ENST00000358392	human	ensembl	74_37	-1	known	missense	c.4435	p.Q1479E	1.000	pfam_Collagen	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A1	HGNC	ENSG00000060718	tier1	-	-	89	0	0.00	80	45	35.71
CORO2B	0	genome.wustl.edu	37	15	69003150	69003150	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	15	69003150	69003150	G	A	SNP	CORO2B	ENST00000566799	human	ensembl	74_37	+1	known	missense	c.413	p.R138Q	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_DUF1900,pfam_DUF1899,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	CORO2B	HGNC	ENSG00000103647	tier1	-	-	58	0	0.00	20	9	31.03
CPAMD8	0	genome.wustl.edu	37	19	17039991	17039991	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	19	17039991	17039991	G	A	SNP	CPAMD8	ENST00000443236	human	ensembl	74_37	-1	known	missense	c.3046	p.R1016C	0.034	NULL	pfam_A2M_comp,pfam_A2M_N_2,pfam_Methyltransf_FA,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_Kazal_dom,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd,smart_Kazal_dom	-	no_errors	CPAMD8	HGNC	ENSG00000160111	tier1	rs200258917	-	82	0	0.00	48	4	7.69
CRYBB3	0	genome.wustl.edu	37	22	25603066	25603066	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	22	25603066	25603066	C	T	SNP	CRYBB3	ENST00000215855	human	ensembl	74_37	+1	known	missense	c.523	p.R175W	0.997	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	-	no_errors	CRYBB3	HGNC	ENSG00000100053	tier1	-	-	232	0	0.00	70	57	44.53
CSDE1	0	genome.wustl.edu	37	1	115268876	115268877	+	Frame_Shift_Ins	INS	-	-	AATC			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	1	115268876	115268877	-	AATC	INS	CSDE1	ENST00000369530	human	ensembl	74_37	-1	known	frame_shift_ins	c.1641_1640	p.F547fs	1.000:1.000	pfam_CSP_DNA-bd,superfamily_NA-bd_OB-fold,smart_Cold_shock_prot	pfam_CSP_DNA-bd,superfamily_NA-bd_OB-fold,smart_Cold_shock_prot	-	no_errors	CSDE1	HGNC	ENSG00000009307	tier1			58	0	0.00	54	17	23.94
CSMD3	0	genome.wustl.edu	37	8	113529308	113529308	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	8	113529308	113529308	C	T	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	missense	c.4711	p.V1571I	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796	tier1	-	-	92	0	0.00	130	33	20.25
CSMD3	0	genome.wustl.edu	37	8	113516192	113516192	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	8	113516192	113516192	G	C	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	missense	c.4910	p.P1637R	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796				18	0	0.00	63	9	12.50
CSRP2BP	0	genome.wustl.edu	37	20	18165377	18165377	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	20	18165377	18165377	G	A	SNP	CSRP2BP	ENST00000435364	human	ensembl	74_37	+1	known	missense	c.2116	p.V706I	1.000	pfam_GNAT_dom,superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	pfam_GNAT_dom,superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	-	no_errors	CSRP2BP	HGNC	ENSG00000149474	tier1	-	-	24	0	0.00	17	9	34.62
CX3CR1	0	genome.wustl.edu	37	3	39307429	39307429	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	3	39307429	39307429	C	T	SNP	CX3CR1	ENST00000358309	human	ensembl	74_37	-1	known	missense	c.668	p.R223H	0.003	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_CX3CR1	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_CX3CR1,prints_GPCR_Rhodpsn,prints_Chemokine_rcpt,prints_Duffy_chemokine_rcpt,prints_Chemokine_CXCR4	-	no_errors	CX3CR1	HGNC	ENSG00000168329	tier1	-	-	61	0	0.00	40	19	32.20
CXXC1	0	genome.wustl.edu	37	18	47809897	47809897	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	18	47809897	47809897	G	T	SNP	CXXC1	ENST00000412036	human	ensembl	74_37	-1	known	missense	c.1574	p.T525K	1.000	pfam_CpG-bd_C	pfam_CpG-bd_C,pfam_Znf_CXXC,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	CXXC1	HGNC	ENSG00000154832	tier1	-	-	83	0	0.00	53	4	7.02
CXXC5	0	genome.wustl.edu	37	5	139060532	139060532	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	5	139060532	139060532	G	T	SNP	CXXC5	ENST00000302517	human	ensembl	74_37	+1	known	missense	c.424	p.A142S	1.000	NULL	pfam_Znf_CXXC,pfscan_Znf_CXXC	-	no_errors	CXXC5	HGNC	ENSG00000171604	tier1	-	-	132	0	0.00	34	24	41.38
CYTH2	0	genome.wustl.edu	37	19	48981804	48981804	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	19	48981804	48981804	C	T	SNP	CYTH2	ENST00000427476	human	ensembl	74_37	+1	known	missense	c.1070	p.S357L	0.999	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Sec7_dom,pfam_Pleckstrin_homology,superfamily_Sec7_dom,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Sec7_dom	-	no_errors	CYTH2	HGNC	ENSG00000105443				94	0	0.00	38	2	5.00
DCAF4	0	genome.wustl.edu	37	14	73422300	73422300	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	14	73422300	73422300	G	T	SNP	DCAF4	ENST00000358377	human	ensembl	74_37	+1	known	missense	c.1075	p.G359C	0.998	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF4	HGNC	ENSG00000119599	tier1	-	-	37	0	0.00	43	4	8.51
DCAF4L1	0	genome.wustl.edu	37	4	41984704	41984704	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	4	41984704	41984704	C	A	SNP	DCAF4L1	ENST00000333141	human	ensembl	74_37	+1	known	missense	c.895	p.L299M	0.997	superfamily_WD40_repeat_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF4L1	HGNC	ENSG00000182308	tier1	-	-	77	0	0.00	34	17	33.33
DCLK3	0	genome.wustl.edu	37	3	36779064	36779064	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	3	36779064	36779064	C	A	SNP	DCLK3	ENST00000416516	human	ensembl	74_37	-1	known	missense	c.1087	p.G363W	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	DCLK3	HGNC	ENSG00000163673	tier1	-	-	52	0	0.00	31	11	26.19
DEGS1	0	genome.wustl.edu	37	1	224380109	224380109	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	1	224380109	224380109	G	T	SNP	DEGS1	ENST00000323699	human	ensembl	74_37	+1	known	missense	c.901	p.V301L	1.000	pirsf_Sphingolipid_d4-desaturase	pfam_Fatty_acid_desaturase-1,pfam_Sphingolipid_d4-desaturase_N,pirsf_Sphingolipid_d4-desaturase	-	no_errors	DEGS1	HGNC	ENSG00000143753	tier1	-	-	39	0	0.00	65	4	5.80
DENND4B	0	genome.wustl.edu	37	1	153905768	153905768	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	1	153905768	153905768	C	T	SNP	DENND4B	ENST00000361217	human	ensembl	74_37	-1	known	missense	c.3358	p.D1120N	1.000	NULL	pfam_DENN_dom,pfam_dDENN_dom,pfam_uDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND4B	HGNC	ENSG00000198837	tier1	-	-	50	0	0.00	19	12	38.71
DEPTOR	0	genome.wustl.edu	37	8	120977610	120977610	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	8	120977610	120977610	G	T	SNP	DEPTOR	ENST00000286234	human	ensembl	74_37	+1	known	missense	c.564	p.Q188H	1.000	pfam_DEP_dom,smart_DEP_dom,pfscan_DEP_dom	pfam_DEP_dom,superfamily_PDZ,smart_DEP_dom,smart_PDZ,pfscan_DEP_dom,pfscan_PDZ	-	no_errors	DEPTOR	HGNC	ENSG00000155792				17	0	0.00	26	5	16.13
DHDH	0	genome.wustl.edu	37	19	49442849	49442850	+	Frame_Shift_Ins	INS	-	-	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	19	49442849	49442850	-	G	INS	DHDH	ENST00000221403	human	ensembl	74_37	+1	known	frame_shift_ins	c.510_511	p.A172fs	0.093:0.998	NULL	pfam_Oxidoreductase_N	-	no_errors	DHDH	HGNC	ENSG00000104808	tier1			81	0	0.00	36	22	37.93
DLGAP3	0	genome.wustl.edu	37	1	35334651	35334651	+	Silent	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	1	35334651	35334651	G	A	SNP	DLGAP3	ENST00000235180	human	ensembl	74_37	-1	known	silent	c.2040	p.G680	0.615	pfam_GKAP	pfam_GKAP	-	no_errors	DLGAP3	HGNC	ENSG00000116544	tier1	-	-	51	0	0.00	18	14	42.42
DMD	0	genome.wustl.edu	37	X	31676247	31676247	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	X	31676247	31676247	G	T	SNP	DMD	ENST00000357033	human	ensembl	74_37	-1	known	missense	c.7887	p.D2629E	1.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin,pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947				24	0	0.00	32	4	11.11
DNAH11	0	genome.wustl.edu	37	7	21788289	21788289	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	7	21788289	21788289	G	T	SNP	DNAH11	ENST00000328843	human	ensembl	74_37	+1	known	missense	c.8623	p.A2875S	1.000	superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH11	HGNC	ENSG00000105877	tier1	-	-	63	0	0.00	58	4	6.45
DNAH17	0	genome.wustl.edu	37	17	76423012	76423012	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	17	76423012	76423012	G	C	SNP	DNAH17	ENST00000389840	human	ensembl	74_37	-1	known	missense	c.12835	p.L4279V	0.977	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_HR1_rho-bd	-	no_errors	DNAH17	HGNC	ENSG00000187775	tier1	-	-	51	0	0.00	18	8	30.77
DNAJC1	0	genome.wustl.edu	37	10	22193537	22193537	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	10	22193537	22193537	G	T	SNP	DNAJC1	ENST00000376980	human	ensembl	74_37	-1	known	missense	c.734	p.A245D	1.000	NULL	pfam_DnaJ_domain,pfam_SANT/Myb,superfamily_DnaJ_domain,superfamily_Homeodomain-like,smart_DnaJ_domain,smart_SANT/Myb,pfscan_Myb-like_dom,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJC1	HGNC	ENSG00000136770				19	0	0.00	38	4	9.52
DNM1P47	0	genome.wustl.edu	37	15	102303563	102303563	+	RNA	SNP	A	A	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	15	102303563	102303563	A	G	SNP	DNM1P47	ENST00000561463	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	DNM1P47	HGNC	ENSG00000259660	tier1	-	-	18	0	0.00	3	4	57.14
DNM1P47	0	genome.wustl.edu	37	15	102304524	102304524	+	RNA	SNP	A	A	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	15	102304524	102304524	A	G	SNP	DNM1P47	ENST00000561463	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	DNM1P47	HGNC	ENSG00000259660	tier1	-	-	94	0	0.00	48	6	11.11
DTX3L	0	genome.wustl.edu	37	3	122289345	122289345	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	3	122289345	122289345	G	A	SNP	DTX3L	ENST00000296161	human	ensembl	74_37	+1	known	missense	c.1979	p.R660Q	0.745	NULL	smart_Znf_RING,pfscan_Znf_RING	-	no_errors	DTX3L	HGNC	ENSG00000163840	tier1	-	-	35	0	0.00	42	23	35.38
DUSP13	0	genome.wustl.edu	37	10	76861652	76861652	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	10	76861652	76861652	C	T	SNP	DUSP13	ENST00000491677	human	ensembl	74_37	-1	known	missense	c.359	p.C120Y	0.137	NULL	pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_Atypical_DUSP,prints_Atypical_DUSP_famA	-	no_errors	DUSP13	HGNC	ENSG00000079393	tier1	-	-	89	0	0.00	53	4	7.02
DYRK1A	0	genome.wustl.edu	37	21	38845005	38845005	+	Nonsense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	21	38845005	38845005	C	A	SNP	DYRK1A	ENST00000398960	human	ensembl	74_37	+1	known	nonsense	c.30	p.C10*	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	DYRK1A	HGNC	ENSG00000157540	tier1	-	-	39	0	0.00	36	10	21.74
E2F5	0	genome.wustl.edu	37	8	86119673	86119673	+	Silent	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	8	86119673	86119673	G	A	SNP	E2F5	ENST00000256117	human	ensembl	74_37	+1	known	silent	c.567	p.L189	0.998	NULL	pfam_E2F_TDP	-	no_errors	E2F5	HGNC	ENSG00000133740	tier1	-	-	44	0	0.00	26	9	25.71
E2F7	0	genome.wustl.edu	37	12	77421782	77421783	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	12	77421782	77421783	AG	-	DEL	E2F7	ENST00000322886	human	ensembl	74_37	-1	known	frame_shift_del	c.2021_2020	p.L674fs	0.000:0.000	NULL	pfam_E2F_TDP	-	no_errors	E2F7	HGNC	ENSG00000165891	tier1			48	0	0.00	28	9	24.32
EFCAB14	0	genome.wustl.edu	37	1	47157529	47157529	+	Silent	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	1	47157529	47157529	C	T	SNP	EFCAB14	ENST00000371933	human	ensembl	74_37	-1	known	silent	c.660	p.K220	1.000	NULL	pfscan_EF_hand_dom	-	no_errors	EFCAB14	HGNC	ENSG00000159658	tier1	-	-	43	0	0.00	50	7	12.28
EFCAB4B	0	genome.wustl.edu	37	12	3782646	3782646	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	12	3782646	3782646	C	T	SNP	EFCAB4B	ENST00000440314	human	ensembl	74_37	-1	known	missense	c.637	p.E213K	0.810	NULL	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_EF_hand_dom,smart_Small_GTPase_ARF,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,pfscan_EF_hand_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	EFCAB4B	HGNC	ENSG00000130038	tier1	-	-	65	0	0.00	86	6	6.52
EIF3G	0	genome.wustl.edu	37	19	10225804	10225804	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	19	10225804	10225804	G	T	SNP	EIF3G	ENST00000253108	human	ensembl	74_37	-1	known	missense	c.949	p.P317T	0.998	pirsf_eIF3_g,pfscan_RRM_dom	pfam_eIF3g_N,pfam_RRM_dom,smart_RRM_dom,pirsf_eIF3_g,pfscan_RRM_dom	-	no_errors	EIF3G	HGNC	ENSG00000130811	tier1	-	-	183	0	0.00	51	44	46.32
ELF2	0	genome.wustl.edu	37	4	139981500	139981500	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	4	139981500	139981500	C	T	SNP	ELF2	ENST00000379550	human	ensembl	74_37	-1	known	missense	c.1135	p.V379M	0.317	NULL	pfam_TF_Elf_N,pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	ELF2	HGNC	ENSG00000109381	tier1	-	-	22	0	0.00	24	10	29.41
ENSG00000231171	0	genome.wustl.edu	37	4	178896971	178896971	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	4	178896971	178896971	G	T	SNP	ENSG00000231171	ENST00000507870	human	ensembl	74_37	+1	putative	missense	c.174	p.M58I	0.000	NULL	NULL	-	no_errors	RP11-389E17.1	Clone_based_vega_gene	ENSG00000231171	tier1	-	-	41	0	0.00	17	13	43.33
ENSG00000254967	0	genome.wustl.edu	37	11	125820816	125820816	+	RNA	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	11	125820816	125820816	G	T	SNP	ENSG00000254967	ENST00000529072	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.976	-	-	-	no_errors	RP11-680F20.6	Clone_based_vega_gene	ENSG00000254967	tier1	-	-	152	0	0.00	58	4	6.45
ENSG00000263020	0	genome.wustl.edu	37	6	31638955	31638955	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	6	31638955	31638955	G	A	SNP	ENSG00000263020	ENST00000375880	human	ensembl	74_37	+1	putative	missense	c.580	p.V194M	0.985	NULL	pfam_Casein_kinase_II_reg-sub,superfamily_Casein_kinase_II_reg-sub,prints_Casein_kinase_II_reg-sub	-	no_errors	CSNK2B-LY6G5B-1181	Uniprot_gn	ENSG00000263020	tier1	-	-	73	0	0.00	47	22	31.88
ENSG00000266560	0	genome.wustl.edu	37	X	151284037	151284037	+	RNA	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	X	151284037	151284037	C	A	SNP	ENSG00000266560	ENST00000509345	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-1007I13.4	Clone_based_vega_gene	ENSG00000266560	tier1	-	-	87	0	0.00	20	51	71.83
EPB41	0	genome.wustl.edu	37	1	29365939	29365939	+	Splice_Site	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	1	29365939	29365939	G	A	SNP	EPB41	ENST00000343067	human	ensembl	74_37	+1	known	splice_site	c.1636+1	e10+1	1.000	-	-	-	no_errors	EPB41	HGNC	ENSG00000159023	tier1	-	-	64	0	0.00	40	17	29.82
EPHB4	0	genome.wustl.edu	37	7	100417397	100417397	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	7	100417397	100417397	C	T	SNP	EPHB4	ENST00000358173	human	ensembl	74_37	-1	known	missense	c.1079	p.R360H	0.941	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Kinase-like_dom,superfamily_Galactose-bd-like,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHB4	HGNC	ENSG00000196411				69	0	0.00	27	2	6.90
ERN2	0	genome.wustl.edu	37	16	23713995	23713995	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	16	23713995	23713995	T	G	SNP	ERN2	ENST00000256797	human	ensembl	74_37	-1	known	missense	c.1027	p.T343P	0.246	NULL	pfam_KEN_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Quinonprotein_ADH-like_supfam,smart_PQQ_beta_propeller_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PUG-dom,pfscan_Prot_kinase_dom	-	no_errors	ERN2	HGNC	ENSG00000134398	tier1	-	-	38	0	0.00	19	11	36.67
ERV3-1	0	genome.wustl.edu	37	7	64453295	64453295	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	7	64453295	64453295	G	A	SNP	ERV3-1	ENST00000394323	human	ensembl	74_37	-1	known	missense	c.110	p.S37L	0.820	NULL	NULL	-	no_errors	ERV3-1	HGNC	ENSG00000213462	tier1	-	-	36	0	0.00	32	10	23.81
ERV3-1	0	genome.wustl.edu	37	7	64453327	64453327	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	7	64453327	64453327	C	A	SNP	ERV3-1	ENST00000394323	human	ensembl	74_37	-1	known	missense	c.78	p.E26D	0.908	NULL	NULL	-	no_errors	ERV3-1	HGNC	ENSG00000213462	tier1	-	-	36	0	0.00	34	11	24.44
ERV3-1	0	genome.wustl.edu	37	7	64453347	64453347	+	Missense_Mutation	SNP	A	A	C			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	7	64453347	64453347	A	C	SNP	ERV3-1	ENST00000394323	human	ensembl	74_37	-1	known	missense	c.58	p.L20V	0.889	NULL	NULL	-	no_errors	ERV3-1	HGNC	ENSG00000213462	tier1	-	-	30	0	0.00	26	11	29.73
F5	0	genome.wustl.edu	37	1	169519183	169519183	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	1	169519183	169519183	C	A	SNP	F5	ENST00000367797	human	ensembl	74_37	-1	known	missense	c.1467	p.E489D	0.860	superfamily_Cupredoxin	pfam_Coagulation_fac_5/8-C_type_dom,pfam_Cu-oxidase_3,superfamily_Galactose-bd-like,superfamily_Cupredoxin,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	F5	HGNC	ENSG00000198734	tier1	-	-	54	0	0.00	39	30	43.48
FAM179B	0	genome.wustl.edu	37	14	45513927	45513927	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	14	45513927	45513927	G	T	SNP	FAM179B	ENST00000361577	human	ensembl	74_37	+1	known	missense	c.4008	p.E1336D	0.998	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	FAM179B	HGNC	ENSG00000198718	tier1	-	-	46	0	0.00	57	4	6.56
FAM65B	0	genome.wustl.edu	37	6	24809943	24809943	+	Splice_Site	SNP	A	A	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	6	24809943	24809943	A	T	SNP	FAM65B	ENST00000259698	human	ensembl	74_37	-1	known	splice_site	c.3106+2	e21+2	1.000	-	-	-	no_errors	FAM65B	HGNC	ENSG00000111913				43	0	0.00	68	16	18.82
FAM83F	0	genome.wustl.edu	37	22	40391301	40391301	+	Silent	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	22	40391301	40391301	C	A	SNP	FAM83F	ENST00000333407	human	ensembl	74_37	+1	known	silent	c.255	p.G85	0.682	pfam_DUF1669	pfam_DUF1669	-	no_errors	FAM83F	HGNC	ENSG00000133477	tier1	-	-	19	0	0.00	8	7	46.67
FAT3	0	genome.wustl.edu	37	11	92538510	92538510	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	11	92538510	92538510	G	A	SNP	FAT3	ENST00000298047	human	ensembl	74_37	+1	known	missense	c.9088	p.D3030N	1.000	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323	tier1	-	-	35	0	0.00	59	5	7.58
FBRS	0	genome.wustl.edu	37	16	30675640	30675640	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	16	30675640	30675640	C	T	SNP	FBRS	ENST00000356166	human	ensembl	74_37	+1	known	missense	c.1160	p.A387V	0.991	NULL	prints_AUTS2	-	no_errors	FBRS	HGNC	ENSG00000156860	tier1	-	-	189	0	0.00	47	26	35.62
FBXO34	0	genome.wustl.edu	37	14	55818294	55818294	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	14	55818294	55818294	G	A	SNP	FBXO34	ENST00000313833	human	ensembl	74_37	+1	known	missense	c.1186	p.A396T	0.003	NULL	superfamily_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO34	HGNC	ENSG00000178974	tier1	-	-	41	0	0.00	26	38	59.38
FBXO40	0	genome.wustl.edu	37	3	121341286	121341286	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	3	121341286	121341286	G	T	SNP	FBXO40	ENST00000338040	human	ensembl	74_37	+1	known	missense	c.1010	p.G337V	1.000	NULL	superfamily_F-box_dom,superfamily_TRAF-like,pfscan_F-box_dom,pfscan_Znf_TRAF	-	no_errors	FBXO40	HGNC	ENSG00000163833	tier1	-	-	21	0	0.00	22	13	37.14
FBXW5	0	genome.wustl.edu	37	9	139836492	139836492	+	RNA	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	9	139836492	139836492	G	T	SNP	FBXW5	ENST00000487794	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	FBXW5	HGNC	ENSG00000159069	tier1	-	-	86	0	0.00	53	5	8.62
FIGN	0	genome.wustl.edu	37	2	164468131	164468132	+	Frame_Shift_Ins	INS	-	-	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	2	164468131	164468132	-	T	INS	FIGN	ENST00000333129	human	ensembl	74_37	-1	known	frame_shift_ins	c.211_210	p.Y70fs	1.000:0.998	NULL	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	FIGN	HGNC	ENSG00000182263	tier1			39	0	0.00	36	13	26.53
FLG	0	genome.wustl.edu	37	1	152278839	152278841	+	In_Frame_Del	DEL	TGT	TGT	-			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	TGT	TGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	1	152278839	152278841	TGT	-	DEL	FLG	ENST00000368799	human	ensembl	74_37	-1	known	in_frame_del	c.8523_8521	p.T2841in_frame_del	0.000:0.000:0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631	tier1			197	0	0.00	123	21	14.58
FLNC	0	genome.wustl.edu	37	7	128491646	128491646	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	7	128491646	128491646	C	A	SNP	FLNC	ENST00000325888	human	ensembl	74_37	+1	known	missense	c.5806	p.H1936N	1.000	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNC	HGNC	ENSG00000128591	tier1	-	-	42	0	0.00	24	13	35.14
FLT1	0	genome.wustl.edu	37	13	28897002	28897002	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	13	28897002	28897002	C	T	SNP	FLT1	ENST00000282397	human	ensembl	74_37	-1	known	missense	c.2878	p.V960I	0.980	pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_VEGFR1_rcpt	-	no_errors	FLT1	HGNC	ENSG00000102755	tier1	-	-	45	0	0.00	26	19	42.22
FMN1	0	genome.wustl.edu	37	15	33358786	33358786	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	15	33358786	33358786	C	T	SNP	FMN1	ENST00000334528	human	ensembl	74_37	-1	known	missense	c.1300	p.E434K	1.000	NULL	pfam_FH2_Formin,smart_FH2_Formin,prints_Formin_Cappuccino_subfam	-	no_errors	FMN1	HGNC	ENSG00000248905	tier1	-	-	54	0	0.00	59	5	7.81
FMO6P	0	genome.wustl.edu	37	1	171121381	171121381	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	1	171121381	171121381	G	T	SNP	FMO6P	ENST00000236166	human	ensembl	74_37	+1	novel	missense	c.1160	p.W387L	1.000	pfam_Flavin_mOase-like,prints_Flavin_mOase	pfam_Flavin_mOase-like,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,prints_Flavin_mOase,prints_Flavin_mOase_3,prints_Flavin_mOase_1	-	no_errors	FMO6P	HGNC	ENSG00000117507	tier1	-	-	29	0	0.00	28	10	25.64
FUT8	0	genome.wustl.edu	37	14	66188719	66188719	+	Silent	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	14	66188719	66188719	C	T	SNP	FUT8	ENST00000360689	human	ensembl	74_37	+1	known	silent	c.1062	p.G354	1.000	pirsf_Alpha1_6FUT_euk	superfamily_SH3_domain,smart_SH3_domain,pirsf_Alpha1_6FUT_euk	-	no_errors	FUT8	HGNC	ENSG00000033170	tier1	-	-	55	0	0.00	50	22	30.56
FZD1	0	genome.wustl.edu	37	7	90895863	90895863	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	7	90895863	90895863	C	A	SNP	FZD1	ENST00000287934	human	ensembl	74_37	+1	known	missense	c.1668	p.F556L	1.000	pfam_Frizzled,pfscan_GPCR_2-like	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD1	HGNC	ENSG00000157240	tier1	-	-	42	0	0.00	17	9	34.62
FZD6	0	genome.wustl.edu	37	8	104341947	104341947	+	Missense_Mutation	SNP	A	A	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	8	104341947	104341947	A	G	SNP	FZD6	ENST00000358755	human	ensembl	74_37	+1	known	missense	c.1606	p.K536E	1.000	NULL	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD6	HGNC	ENSG00000164930	tier1	-	-	29	0	0.00	98	23	19.01
FZR1	0	genome.wustl.edu	37	19	3530789	3530789	+	Splice_Site	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	19	3530789	3530789	G	T	SNP	FZR1	ENST00000395095	human	ensembl	74_37	+1	known	splice_site	c.655-1	e7-1	1.000	-	-	-	no_errors	FZR1	HGNC	ENSG00000105325	tier1	-	-	50	0	0.00	37	4	9.76
GALNT3	0	genome.wustl.edu	37	2	166611182	166611182	+	Silent	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	2	166611182	166611182	G	T	SNP	GALNT3	ENST00000392701	human	ensembl	74_37	-1	known	silent	c.1581	p.G527	1.000	pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT3	HGNC	ENSG00000115339	tier1	-	-	62	0	0.00	95	5	5.00
GBAP1	0	genome.wustl.edu	37	1	155184007	155184007	+	RNA	SNP	A	A	C			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	1	155184007	155184007	A	C	SNP	GBAP1	ENST00000368374	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.994	-	-	-	no_errors	GBAP1	HGNC	ENSG00000160766				13	0	0.00	6	3	33.33
GCNT4	0	genome.wustl.edu	37	5	74325367	74325367	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	5	74325367	74325367	G	T	SNP	GCNT4	ENST00000322348	human	ensembl	74_37	-1	known	missense	c.496	p.R166S	0.997	pfam_Glyco_trans_14	pfam_Glyco_trans_14	-	no_errors	GCNT4	HGNC	ENSG00000176928				18	0	0.00	35	2	5.41
GDA	0	genome.wustl.edu	37	9	74825650	74825650	+	Silent	SNP	A	A	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	9	74825650	74825650	A	G	SNP	GDA	ENST00000238018	human	ensembl	74_37	+1	known	silent	c.432	p.T144	1.000	pfam_Amidohydro_1,tigrfam_Guanine_deaminase	pfam_Amidohydro_1,tigrfam_Guanine_deaminase	-	no_errors	GDA	HGNC	ENSG00000119125	tier1	-	-	22	0	0.00	28	12	30.00
GFI1	0	genome.wustl.edu	37	1	92948423	92948423	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	1	92948423	92948423	G	T	SNP	GFI1	ENST00000294702	human	ensembl	74_37	-1	known	missense	c.296	p.P99Q	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GFI1	HGNC	ENSG00000162676				170	0	0.00	75	4	5.06
GIT2	0	genome.wustl.edu	37	12	110399130	110399130	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	12	110399130	110399130	C	T	SNP	GIT2	ENST00000355312	human	ensembl	74_37	-1	known	missense	c.940	p.V314I	1.000	NULL	pfam_GIT1_C,pfam_GIT_SHD,pfam_ArfGAP,superfamily_Ankyrin_rpt-contain_dom,smart_ArfGAP,smart_Ankyrin_rpt,smart_GIT_SHD,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	GIT2	HGNC	ENSG00000139436	tier1	-	-	70	0	0.00	54	4	6.90
GLI1	0	genome.wustl.edu	37	12	57860033	57860033	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	12	57860033	57860033	G	A	SNP	GLI1	ENST00000228682	human	ensembl	74_37	+1	known	missense	c.773	p.S258N	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI1	HGNC	ENSG00000111087	tier1	-	-	61	0	0.00	27	23	46.00
GMEB2	0	genome.wustl.edu	37	20	62250679	62250679	+	Silent	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	20	62250679	62250679	G	A	SNP	GMEB2	ENST00000266068	human	ensembl	74_37	-1	known	silent	c.72	p.D24	0.297	NULL	pfam_SAND_dom,superfamily_SAND_dom-like,superfamily_Sig_transdc_His_kin_Hpt_dom,smart_SAND_dom,pfscan_SAND_dom	-	no_errors	GMEB2	HGNC	ENSG00000101216	tier1	-	-	101	0	0.00	27	18	40.00
GNAS	0	genome.wustl.edu	37	20	57484421	57484421	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	20	57484421	57484421	G	A	SNP	GNAS	ENST00000354359	human	ensembl	74_37	+1	known	missense	c.605	p.R202H	1.000	pfam_Gprotein_alpha_su,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_S,prints_Gprotein_alpha_su	-	no_errors	GNAS	HGNC	ENSG00000087460	tier1	rs121913495	-	68	0	0.00	34	31	46.97
GPAA1	0	genome.wustl.edu	37	8	145138344	145138344	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	8	145138344	145138344	G	A	SNP	GPAA1	ENST00000355091	human	ensembl	74_37	+1	known	missense	c.307	p.V103I	1.000	pirsf_GPI_prot_transamidse_cplx_GAA1	pfam_Gaa1,pirsf_GPI_prot_transamidse_cplx_GAA1	-	no_errors	GPAA1	HGNC	ENSG00000197858	tier1	-	-	110	0	0.00	105	19	15.20
GPR149	0	genome.wustl.edu	37	3	154139187	154139187	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	3	154139187	154139187	C	T	SNP	GPR149	ENST00000389740	human	ensembl	74_37	-1	known	missense	c.1264	p.E422K	0.959	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	GPR149	HGNC	ENSG00000174948	tier1	-	-	12	0	0.00	9	9	50.00
GPR98	0	genome.wustl.edu	37	5	89981726	89981726	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	5	89981726	89981726	G	C	SNP	GPR98	ENST00000405460	human	ensembl	74_37	+1	known	missense	c.6404	p.G2135A	1.000	pfam_Calx_beta,smart_Calx_beta	pfam_Calx_beta,pfam_EPTP,pfam_GPCR_2_secretin-like,pfam_GPS_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Gal_Oxase/kelch_b-propeller,smart_Calx_beta,pfscan_EAR,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR98	HGNC	ENSG00000164199	tier1	-	-	37	0	0.00	40	18	31.03
GRAMD2	0	genome.wustl.edu	37	15	72456023	72456023	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	15	72456023	72456023	G	C	SNP	GRAMD2	ENST00000309731	human	ensembl	74_37	-1	known	missense	c.676	p.P226A	0.401	NULL	pfam_GRAM,smart_GRAM	-	no_errors	GRAMD2	HGNC	ENSG00000175318	tier1	-	-	33	0	0.00	17	6	26.09
GRID1	0	genome.wustl.edu	37	10	87966134	87966134	+	Silent	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	10	87966134	87966134	G	A	SNP	GRID1	ENST00000327946	human	ensembl	74_37	-1	known	silent	c.507	p.Y169	0.981	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRID1	HGNC	ENSG00000182771	tier1	-	-	40	0	0.00	15	7	31.82
GRID2IP	0	genome.wustl.edu	37	7	6537841	6537841	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	7	6537841	6537841	G	T	SNP	GRID2IP	ENST00000457091	human	ensembl	74_37	-1	putative	missense	c.3418	p.Q1140K	1.000	pfam_FH2_Formin,smart_FH2_Formin	pfam_FH2_Formin,pfam_PDZ,superfamily_PDZ,smart_PDZ,smart_FH2_Formin,pfscan_PDZ	-	no_errors	GRID2IP	HGNC	ENSG00000215045				140	0	0.00	72	4	5.26
GRIK2	0	genome.wustl.edu	37	6	101847189	101847189	+	Silent	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	6	101847189	101847189	C	A	SNP	GRIK2	ENST00000421544	human	ensembl	74_37	+1	known	silent	c.36	p.V12	1.000	NULL	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK2	HGNC	ENSG00000164418	tier1	-	-	56	0	0.00	23	19	45.24
GTF3C2	0	genome.wustl.edu	37	2	27551709	27551709	+	Splice_Site	SNP	A	A	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	2	27551709	27551709	A	G	SNP	GTF3C2	ENST00000264720	human	ensembl	74_37	-1	known	splice_site	c.2127+2	e14+2	1.000	-	-	-	no_errors	GTF3C2	HGNC	ENSG00000115207	tier1	-	-	41	0	0.00	33	14	29.79
GUCY2F	0	genome.wustl.edu	37	X	108641818	108641818	+	Silent	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	X	108641818	108641818	G	A	SNP	GUCY2F	ENST00000218006	human	ensembl	74_37	-1	known	silent	c.2235	p.V745	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_A/G_cyclase,pfam_ANF_lig-bd_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Haem_no_assoc-bd,superfamily_Peripla_BP_I,superfamily_A/G_cyclase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_A/G_cyclase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_A/G_cyclase	-	no_errors	GUCY2F	HGNC	ENSG00000101890	tier1	-	-	15	0	0.00	3	22	88.00
HBP1	0	genome.wustl.edu	37	7	106829747	106829747	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	7	106829747	106829747	C	T	SNP	HBP1	ENST00000222574	human	ensembl	74_37	+1	known	missense	c.776	p.S259F	1.000	pfam_Ataxin-1_HBP1,superfamily_Ataxin-1_HBP1,smart_Ataxin_AXH_dom,pfscan_Ataxin-1_HBP1	pfam_Ataxin-1_HBP1,pfam_HMG_box_dom,superfamily_Ataxin-1_HBP1,superfamily_HMG_box_dom,smart_Ataxin_AXH_dom,smart_HMG_box_dom,pfscan_Ataxin-1_HBP1,pfscan_HMG_box_dom	-	no_errors	HBP1	HGNC	ENSG00000105856	tier1	-	-	57	0	0.00	75	9	10.71
HDLBP	0	genome.wustl.edu	37	2	242181874	242181874	+	Splice_Site	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	2	242181874	242181874	C	A	SNP	HDLBP	ENST00000310931	human	ensembl	74_37	-1	known	splice_site	c.2169+1	e15+1	1.000	-	-	-	no_errors	HDLBP	HGNC	ENSG00000115677				47	0	0.00	35	2	5.41
HDX	0	genome.wustl.edu	37	X	83724053	83724053	+	Silent	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	X	83724053	83724053	C	A	SNP	HDX	ENST00000297977	human	ensembl	74_37	-1	known	silent	c.678	p.G226	0.997	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	HDX	HGNC	ENSG00000165259	tier1	-	-	19	0	0.00	5	23	82.14
HELB	0	genome.wustl.edu	37	12	66718883	66718883	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	12	66718883	66718883	G	A	SNP	HELB	ENST00000247815	human	ensembl	74_37	+1	known	missense	c.2647	p.A883T	1.000	superfamily_P-loop_NTPase	superfamily_P-loop_NTPase	-	no_errors	HELB	HGNC	ENSG00000127311				68	0	0.00	70	4	5.41
HERC2	0	genome.wustl.edu	37	15	28441632	28441632	+	Missense_Mutation	SNP	C	C	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	15	28441632	28441632	C	G	SNP	HERC2	ENST00000261609	human	ensembl	74_37	-1	known	missense	c.8095	p.V2699L	1.000	NULL	pfam_Reg_chr_condens,pfam_HECT,pfam_CPH_domain,pfam_Mib_Herc2,pfam_Cyt_B5-like_heme/steroid-bd,pfam_Znf_ZZ,pfam_APC_su10/DOC_dom,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_Galactose-bd-like,superfamily_Cyt_B5-like_heme/steroid-bd,superfamily_UBA-like,superfamily_CUB_dom,smart_Beta-propeller_rpt_TECPR,smart_Znf_ZZ,smart_HECT,pfscan_HECT,pfscan_Znf_ZZ,pfscan_Reg_chr_condens,pfscan_Cyt_B5-like_heme/steroid-bd,prints_Reg_chr_condens	-	no_errors	HERC2	HGNC	ENSG00000128731	tier1	-	-	104	0	0.00	103	54	34.39
HIPK1	0	genome.wustl.edu	37	1	114508756	114508756	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	1	114508756	114508756	C	T	SNP	HIPK1	ENST00000369558	human	ensembl	74_37	+1	known	missense	c.2243	p.A748V	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	HIPK1	HGNC	ENSG00000163349				54	0	0.00	50	4	7.41
HIST1H4E	0	genome.wustl.edu	37	6	26204991	26204991	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	6	26204991	26204991	G	C	SNP	HIST1H4E	ENST00000360441	human	ensembl	74_37	+1	known	missense	c.119	p.R40P	1.000	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H4,smart_TAF_TATA-bd,prints_Histone_H4	pfam_Histone_core_D,pfam_TAF_TATA-bd,superfamily_Histone-fold,smart_Histone_H4,smart_TAF_TATA-bd,prints_Histone_H4	-	no_errors	HIST1H4E	HGNC	ENSG00000198518	tier1	-	-	94	0	0.00	50	24	32.43
HLA-B	0	genome.wustl.edu	37	6	31322980	31322980	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	6	31322980	31322980	C	A	SNP	HLA-B	ENST00000412585	human	ensembl	74_37	-1	known	missense	c.916	p.V306F	0.000	NULL	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,pfam_MHC_I_a_C,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	HLA-B	HGNC	ENSG00000234745	tier1	-	-	107	0	0.00	56	31	35.23
HLA-DOA	0	genome.wustl.edu	37	6	32975251	32975251	+	Silent	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	6	32975251	32975251	G	A	SNP	HLA-DOA	ENST00000229829	human	ensembl	74_37	-1	known	silent	c.450	p.N150	0.823	pfam_Ig_C1-set,pfam_CD80_C2-set,smart_Ig_C1-set,pfscan_Ig-like_dom	pfam_MHC_II_a_N,pfam_Ig_C1-set,pfam_CD80_C2-set,superfamily_MHC_I/II-like_Ag-recog,smart_MHC_II_a_N,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	HLA-DOA	HGNC	ENSG00000204252	tier1	-	-	91	0	0.00	36	22	37.93
HMMR	0	genome.wustl.edu	37	5	162917425	162917426	+	Frame_Shift_Ins	INS	-	-	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	5	162917425	162917426	0	A	INS	HMMR	ENST00000393915	human	ensembl	74_37	+1	known	frame_shift_ins	c.1992_1993	p.Q667fs	0.976:1.000	NULL	NULL	-	no_errors	HMMR	HGNC	ENSG00000072571				46	0	0.00	70	9	11.39
HNF4A	0	genome.wustl.edu	37	20	43057081	43057081	+	Silent	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	20	43057081	43057081	C	T	SNP	HNF4A	ENST00000316099	human	ensembl	74_37	+1	known	silent	c.1236	p.L412	1.000	NULL	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_COUP_TF,prints_Retinoid-X_rcpt/HNF4	-	no_errors	HNF4A	HGNC	ENSG00000101076	tier1	-	-	50	0	0.00	29	5	14.71
HOXA2	0	genome.wustl.edu	37	7	27140789	27140789	+	Missense_Mutation	SNP	C	C	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	7	27140789	27140789	C	G	SNP	HOXA2	ENST00000222718	human	ensembl	74_37	-1	known	missense	c.687	p.E229D	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXA2	HGNC	ENSG00000105996				22	0	0.00	34	4	10.53
HSP90AB1	0	genome.wustl.edu	37	6	44217808	44217811	+	Frame_Shift_Del	DEL	CAGA	CAGA	-			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	CAGA	CAGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	6	44217808	44217811	CAGA	-	DEL	HSP90AB1	ENST00000353801	human	ensembl	74_37	+1	known	frame_shift_del	c.565_568	p.T190fs	1.000:1.000:1.000:1.000	superfamily_HATPase_ATP-bd,pirsf_Hsp90_fam,prints_Hsp90_N	pfam_Hsp90_fam,pfam_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_HATPase_ATP-bd,smart_HATPase_ATP-bd,pirsf_Hsp90_fam,prints_Hsp90_N	-	no_errors	HSP90AB1	HGNC	ENSG00000096384	tier1			46	0	0.00	52	12	18.75
HUNK	0	genome.wustl.edu	37	21	33370907	33370907	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	21	33370907	33370907	G	T	SNP	HUNK	ENST00000270112	human	ensembl	74_37	+1	known	nonsense	c.1555	p.E519*	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	HUNK	HGNC	ENSG00000142149	tier1	-	-	48	0	0.00	43	4	8.51
HYDIN	0	genome.wustl.edu	37	16	70897063	70897063	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	16	70897063	70897063	G	A	SNP	HYDIN	ENST00000393567	human	ensembl	74_37	-1	putative	missense	c.11494	p.R3832C	0.043	NULL	superfamily_P-loop_NTPase,superfamily_PapD-like	-	no_errors	HYDIN	HGNC	ENSG00000157423	tier1	rs201571332	-	17	0	0.00	17	8	32.00
IFT140	0	genome.wustl.edu	37	16	1621406	1621406	+	Splice_Site	SNP	A	A	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	16	1621406	1621406	A	G	SNP	IFT140	ENST00000426508	human	ensembl	74_37	-1	known	splice_site	c.1652+2	e12+2	1.000	-	-	-	no_errors	IFT140	HGNC	ENSG00000187535	tier1	-	-	102	0	0.00	49	37	42.53
IFT52	0	genome.wustl.edu	37	20	42275603	42275603	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	20	42275603	42275603	G	T	SNP	IFT52	ENST00000373030	human	ensembl	74_37	+1	known	missense	c.1294	p.A432S	0.869	NULL	pfam_ABC_transp_unknown	-	no_errors	IFT52	HGNC	ENSG00000101052	tier1	-	-	56	0	0.00	73	5	6.41
IFT80	0	genome.wustl.edu	37	3	160037578	160037578	+	Silent	SNP	T	T	C			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	3	160037578	160037578	T	C	SNP	IFT80	ENST00000483754	human	ensembl	74_37	-1	known	silent	c.1440	p.Q480	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,pfam_Znf_C3HC4_RING-type,pfam_Znf_B-box,superfamily_WD40_repeat_dom,smart_Znf_RING,smart_WD40_repeat,pfscan_Znf_B-box,pfscan_Znf_RING,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	RP11-432B6.3	Clone_based_vega_gene	ENSG00000248710	tier1	-	-	28	0	0.00	38	19	33.33
IFT88	0	genome.wustl.edu	37	13	21265270	21265270	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	13	21265270	21265270	G	A	SNP	IFT88	ENST00000319980	human	ensembl	74_37	+1	known	missense	c.2458	p.D820N	1.000	NULL	pfam_TPR_1,pfam_TPR_2,pfam_OMP_IML2_mit/TPR_39,smart_TPR_repeat,smart_Sel1-like,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	IFT88	HGNC	ENSG00000032742	tier1	-	-	101	0	0.00	83	5	5.68
IGF1	0	genome.wustl.edu	37	12	102813302	102813302	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	12	102813302	102813302	C	A	SNP	IGF1	ENST00000307046	human	ensembl	74_37	-1	known	missense	c.387	p.M129I	1.000	prints_IGF-I	pfam_Insulin-like,superfamily_Insulin-like,smart_Insulin-like,prints_IGF-I,prints_Insulin_family,prints_Insulin-like_growth_factor	-	no_errors	IGF1	HGNC	ENSG00000017427	tier1	-	-	39	0	0.00	17	4	19.05
IGLL5	0	genome.wustl.edu	37	22	23237782	23237782	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	22	23237782	23237782	G	A	SNP	IGLL5	ENST00000532223	human	ensembl	74_37	+1	known	missense	c.556	p.E186K	0.000	pfam_Ig_C1-set,pfam_CD80_C2-set,smart_Ig_C1-set,pfscan_Ig-like_dom	pfam_Ig_C1-set,pfam_CD80_C2-set,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	IGLL5	HGNC	ENSG00000254709	tier1	-	-	197	0	0.00	110	13	10.57
IL15	0	genome.wustl.edu	37	4	142642320	142642320	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	4	142642320	142642320	G	T	SNP	IL15	ENST00000394159	human	ensembl	74_37	+1	known	missense	c.19	p.D7Y	0.003	pfam_IL-15/IL-21_fam	pfam_IL-15/IL-21_fam,prints_IL-15	-	no_errors	IL15	HGNC	ENSG00000164136	tier1	-	-	43	0	0.00	25	14	35.90
INF2	0	genome.wustl.edu	37	14	105180911	105180911	+	Silent	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	14	105180911	105180911	C	T	SNP	INF2	ENST00000392634	human	ensembl	74_37	+1	known	silent	c.3412	p.L1138	0.000	NULL	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,pfam_WH2_dom,superfamily_ARM-type_fold,smart_FH2_Formin,pfscan_WH2_dom	-	no_errors	INF2	HGNC	ENSG00000203485				92	0	0.00	62	4	6.06
IPO11	0	genome.wustl.edu	37	5	61923185	61923185	+	RNA	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	5	61923185	61923185	G	T	SNP	IPO11	ENST00000512177	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	IPO11	HGNC	ENSG00000086200	tier1	-	-	52	0	0.00	50	4	7.41
IQCE	0	genome.wustl.edu	37	7	2611943	2611943	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	7	2611943	2611943	G	A	SNP	IQCE	ENST00000402050	human	ensembl	74_37	+1	known	missense	c.377	p.R126K	0.592	NULL	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	-	no_errors	IQCE	HGNC	ENSG00000106012	tier1	-	-	49	0	0.00	17	8	30.77
IQCE	0	genome.wustl.edu	37	7	2625840	2625840	+	Splice_Site	SNP	A	A	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	7	2625840	2625840	A	G	SNP	IQCE	ENST00000402050	human	ensembl	74_37	+1	known	splice_site	c.825-2	e12-2	0.625	-	-	-	no_errors	IQCE	HGNC	ENSG00000106012	tier1	-	-	49	0	0.00	43	4	8.51
ISPD	0	genome.wustl.edu	37	7	16255711	16255711	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	7	16255711	16255711	G	T	SNP	ISPD	ENST00000407010	human	ensembl	74_37	-1	known	missense	c.1231	p.L411I	0.858	NULL	pfam_IspD	-	no_errors	ISPD	HGNC	ENSG00000214960	tier1	-	-	52	0	0.00	31	15	32.61
ITGA1	0	genome.wustl.edu	37	5	52206093	52206093	+	Silent	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	5	52206093	52206093	C	T	SNP	ITGA1	ENST00000282588	human	ensembl	74_37	+1	known	silent	c.1701	p.C567	0.084	smart_Int_alpha_beta-p	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGA1	HGNC	ENSG00000213949				28	0	0.00	25	2	7.41
ITK	0	genome.wustl.edu	37	5	156638349	156638349	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	5	156638349	156638349	C	T	SNP	ITK	ENST00000422843	human	ensembl	74_37	+1	known	missense	c.295	p.R99W	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_Znf_Btk_motif,pfam_SH3_domain,pfam_Pleckstrin_homology,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_Znf_Btk_motif,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_Znf_Btk_motif,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	ITK	HGNC	ENSG00000113263	tier1	-	-	50	0	0.00	27	6	18.18
JPH1	0	genome.wustl.edu	37	8	75171619	75171619	+	Splice_Site	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	8	75171619	75171619	C	T	SNP	JPH1	ENST00000342232	human	ensembl	74_37	-1	known	splice_site	c.1258+1	e3+1	1.000	-	-	-	no_errors	JPH1	HGNC	ENSG00000104369	tier1	-	-	39	0	0.00	10	6	37.50
KALRN	0	genome.wustl.edu	37	3	124390534	124390534	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	3	124390534	124390534	G	A	SNP	KALRN	ENST00000360013	human	ensembl	74_37	+1	known	missense	c.6728	p.R2243Q	1.000	NULL	pfam_DH-domain,pfam_Prot_kinase_dom,pfam_Spectrin_repeat,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRAL-TRIO_dom,pfscan_Fibronectin_type3,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	KALRN	HGNC	ENSG00000160145	tier1	-	-	77	0	0.00	43	27	38.57
KCNH4	0	genome.wustl.edu	37	17	40315780	40315780	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	17	40315780	40315780	G	A	SNP	KCNH4	ENST00000264661	human	ensembl	74_37	-1	known	missense	c.2321	p.S774F	1.000	NULL	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_PAS_fold_3,pfam_PAS_fold,pfam_PAS_4,pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ELK,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH4	HGNC	ENSG00000089558	tier1	-	-	84	0	0.00	25	12	32.43
KCTD16	0	genome.wustl.edu	37	5	143586970	143586970	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	5	143586970	143586970	G	T	SNP	KCTD16	ENST00000507359	human	ensembl	74_37	+1	known	missense	c.693	p.K231N	1.000	NULL	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	-	no_errors	KCTD16	HGNC	ENSG00000183775	tier1	-	-	34	0	0.00	50	4	7.41
KCTD19	0	genome.wustl.edu	37	16	67360597	67360597	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	16	67360597	67360597	G	A	SNP	KCTD19	ENST00000562721	human	ensembl	74_37	-1	known	missense	c.14	p.P5L	0.000	NULL	NULL	-	no_errors	KCTD19	HGNC	ENSG00000168676	tier1	-	-	43	0	0.00	15	7	31.82
KDM1A	0	genome.wustl.edu	37	1	23357117	23357118	+	Frame_Shift_Ins	INS	-	-	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	1	23357117	23357118	-	G	INS	KDM1A	ENST00000542151	human	ensembl	74_37	+1	known	frame_shift_ins	c.507_508	p.E169fs	1.000:1.000	pirsf_Hist_Lys-spec_deMease	pfam_Amino_oxidase,pfam_SWIRM,pfam_FAD-dep_OxRdtase,pfam_Pyr_OxRdtase_NAD-bd_dom,pfam_FAD_bind_dom,superfamily_Homeodomain-like,pirsf_Hist_Lys-spec_deMease,pfscan_SWIRM	-	no_errors	KDM1A	HGNC	ENSG00000004487	tier1			30	0	0.00	35	14	28.57
KDM3A	0	genome.wustl.edu	37	2	86716722	86716722	+	Silent	SNP	A	A	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	2	86716722	86716722	A	T	SNP	KDM3A	ENST00000312912	human	ensembl	74_37	+1	known	silent	c.3513	p.G1171	0.966	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	KDM3A	HGNC	ENSG00000115548	tier1	-	-	27	0	0.00	25	10	27.78
KIAA0408	0	genome.wustl.edu	37	6	127767686	127767686	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	6	127767686	127767686	G	T	SNP	KIAA0408	ENST00000483725	human	ensembl	74_37	-1	novel	missense	c.1778	p.S593Y	0.001	NULL	NULL	-	no_errors	KIAA0408	HGNC	ENSG00000189367	tier1	-	-	24	0	0.00	24	27	51.92
KIAA1586	0	genome.wustl.edu	37	6	56918934	56918934	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	6	56918934	56918934	G	A	SNP	KIAA1586	ENST00000370733	human	ensembl	74_37	+1	known	missense	c.1637	p.R546K	0.997	superfamily_RNaseH-like_dom	superfamily_RNaseH-like_dom	-	no_errors	KIAA1586	HGNC	ENSG00000168116	tier1	-	-	42	0	0.00	44	10	18.52
KIAA1919	0	genome.wustl.edu	37	6	111580924	111580924	+	Silent	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	6	111580924	111580924	G	T	SNP	KIAA1919	ENST00000368847	human	ensembl	74_37	+1	known	silent	c.21	p.L7	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	KIAA1919	HGNC	ENSG00000173214	tier1	-	-	113	0	0.00	61	4	6.15
KIF6	0	genome.wustl.edu	37	6	39507786	39507786	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	6	39507786	39507786	C	A	SNP	KIF6	ENST00000287152	human	ensembl	74_37	-1	known	missense	c.1638	p.K546N	0.052	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF6	HGNC	ENSG00000164627	tier1	-	-	62	0	0.00	43	25	36.76
KLHDC7A	0	genome.wustl.edu	37	1	18807852	18807852	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	1	18807852	18807852	G	A	SNP	KLHDC7A	ENST00000400664	human	ensembl	74_37	+1	known	missense	c.377	p.R126Q	0.000	NULL	pfam_Kelch_1,smart_Kelch_1	-	no_errors	KLHDC7A	HGNC	ENSG00000179023	tier1	-	-	109	0	0.00	46	24	33.80
LARGE	0	genome.wustl.edu	37	22	33700424	33700424	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	22	33700424	33700424	G	T	SNP	LARGE	ENST00000354992	human	ensembl	74_37	-1	known	missense	c.1521	p.D507E	0.467	NULL	pfam_Glyco_trans_8	-	no_errors	LARGE	HGNC	ENSG00000133424				88	0	0.00	53	4	7.02
LINC00266-1	0	genome.wustl.edu	37	20	62934863	62934864	+	RNA	INS	-	-	TT			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	20	62934863	62934864	-	TT	INS	LINC00266-1	ENST00000279067	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.448:0.498	-	-	-	no_errors	LINC00266-1	HGNC	ENSG00000149656	tier1			37	0	0.00	63	9	12.50
LINC00273	0	genome.wustl.edu	37	16	33961581	33961581	+	RNA	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	16	33961581	33961581	G	A	SNP	LINC00273	ENST00000539813	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	LINC00273	HGNC	ENSG00000256642				83	0	0.00	37	3	6.98
LNX1	0	genome.wustl.edu	37	4	54362344	54362344	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	4	54362344	54362344	C	T	SNP	LNX1	ENST00000263925	human	ensembl	74_37	-1	known	missense	c.1196	p.R399H	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,superfamily_PDZ,smart_Znf_RING,smart_PDZ,pfscan_PDZ,pfscan_Znf_RING	-	no_errors	LNX1	HGNC	ENSG00000072201	tier1	-	-	50	0	0.00	29	12	29.27
LOC100131347	0	genome.wustl.edu	37	17	37237377	37237377	+	RNA	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	17	37237377	37237377	G	T	SNP	LOC100131347	ENST00000583447	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	CTD-2206N4.4	Clone_based_vega_gene	ENSG00000263818	tier1	-	-	34	0	0.00	40	4	9.09
LOC100132215	0	genome.wustl.edu	37	2	63272536	63272536	+	RNA	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	2	63272536	63272536	G	T	SNP	LOC100132215	ENST00000412297	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.989	-	-	-	no_errors	AC009501.4	Clone_based_vega_gene	ENSG00000231609	tier1	-	-	73	0	0.00	42	18	30.00
LOC100132215	0	genome.wustl.edu	37	2	63272537	63272537	+	RNA	SNP	A	A	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	2	63272537	63272537	A	T	SNP	LOC100132215	ENST00000412297	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.990	-	-	-	no_errors	AC009501.4	Clone_based_vega_gene	ENSG00000231609	tier1	-	-	71	0	0.00	43	18	29.51
LOC100289283	0	genome.wustl.edu	37	16	29822000	29822001	+	RNA	INS	-	-	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	16	29822000	29822001	-	G	INS	LOC100289283	ENST00000569981	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.978:0.992	-	-	-	no_errors	AC009133.14	Clone_based_vega_gene	ENSG00000238045	tier1			25	0	0.00	13	4	23.53
LOC100508046	0	genome.wustl.edu	37	14	20010484	20010484	+	RNA	SNP	A	A	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	14	20010484	20010484	A	G	SNP	LOC100508046	ENST00000547584	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.325	-	-	-	no_errors	RP11-244H18.1	Clone_based_vega_gene	ENSG00000258276	tier1	rs201730464	-	19	0	0.00	21	10	32.26
LOC101927345	0	genome.wustl.edu	37	1	143398884	143398884	+	RNA	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	1	143398884	143398884	C	A	SNP	LOC101927345	ENST00000428624	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-435B5.5	Clone_based_vega_gene	ENSG00000238261	tier1	-	-	83	0	0.00	152	19	11.11
LOC152586	0	genome.wustl.edu	37	4	141377824	141377825	+	Frame_Shift_Ins	INS	-	-	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	4	141377824	141377825	-	A	INS	LOC152586	ENST00000511113	human	ensembl	74_37	-1	putative	frame_shift_ins	c.927_926	p.L309fs	0.993:0.985	pfam_Glyco_transf_54	pfam_Glyco_transf_54	-	no_errors	RP11-542P2.1	Clone_based_vega_gene	ENSG00000205301	tier1			36	0	0.00	39	21	35.00
LOC201651	0	genome.wustl.edu	37	3	151488343	151488343	+	RNA	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	3	151488343	151488343	G	T	SNP	LOC201651	ENST00000463420	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.971	-	-	-	no_errors	RP11-64D22.2	Clone_based_vega_gene	ENSG00000240602	tier1	-	-	54	0	0.00	72	4	5.26
LRP1B	0	genome.wustl.edu	37	2	141299445	141299445	+	Silent	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	2	141299445	141299445	C	T	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	silent	c.7290	p.R2430	0.996	smart_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	tier1	-	-	62	0	0.00	43	19	30.65
LRP5	0	genome.wustl.edu	37	11	68183887	68183887	+	Silent	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	11	68183887	68183887	G	A	SNP	LRP5	ENST00000294304	human	ensembl	74_37	+1	known	silent	c.2919	p.L973	0.997	pirsf_Low_density_Lipo_rcpt-rel_p5/6,smart_LDLR_classB_rpt	pirsf_Low_density_Lipo_rcpt-rel_p5/6,pfam_LDLR_classB_rpt,pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDLR_classB_rpt,smart_EG-like_dom,smart_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	LRP5	HGNC	ENSG00000162337				57	0	0.00	36	3	7.69
LRRC37A11P	0	genome.wustl.edu	37	17	37187981	37187981	+	RNA	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	17	37187981	37187981	G	T	SNP	LRRC37A11P	ENST00000425901	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	LRRC37A11P	HGNC	ENSG00000214553	tier1	-	-	51	0	0.00	54	25	31.65
LRRC43	0	genome.wustl.edu	37	12	122676049	122676049	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	12	122676049	122676049	G	A	SNP	LRRC43	ENST00000339777	human	ensembl	74_37	+1	known	missense	c.1024	p.V342M	1.000	NULL	NULL	-	no_errors	LRRC43	HGNC	ENSG00000158113	tier1	-	-	73	0	0.00	32	42	56.76
LRRC56	0	genome.wustl.edu	37	11	552588	552588	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	11	552588	552588	C	T	SNP	LRRC56	ENST00000270115	human	ensembl	74_37	+1	known	missense	c.1201	p.P401S	0.000	NULL	NULL	-	no_errors	LRRC56	HGNC	ENSG00000161328	tier1	-	-	247	0	0.00	96	36	27.27
LRRCC1	0	genome.wustl.edu	37	8	86019616	86019616	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	8	86019616	86019616	T	G	SNP	LRRCC1	ENST00000360375	human	ensembl	74_37	+1	known	missense	c.86	p.M29R	1.000	NULL	pfam_Leu-rich_rpt,superfamily_Prefoldin	-	no_errors	LRRCC1	HGNC	ENSG00000133739	tier1	-	-	85	0	0.00	35	13	27.08
LRRK2	0	genome.wustl.edu	37	12	40693029	40693029	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	12	40693029	40693029	G	C	SNP	LRRK2	ENST00000298910	human	ensembl	74_37	+1	known	missense	c.3466	p.E1156Q	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_MIRO-like,pfam_Small_GTPase,pfam_Leu-rich_rpt,pfam_Small_GTPase_ARF/SAR,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,superfamily_WD40_repeat_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Small_GTPase_Rab_type,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,prints_Small_GTPase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	LRRK2	HGNC	ENSG00000188906	tier1	-	-	64	0	0.00	44	28	38.89
LRRN1	0	genome.wustl.edu	37	3	3886434	3886434	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	3	3886434	3886434	G	A	SNP	LRRN1	ENST00000319331	human	ensembl	74_37	+1	known	missense	c.109	p.V37I	1.000	NULL	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRRN1	HGNC	ENSG00000175928	tier1	-	-	53	0	0.00	49	27	35.53
LSS	0	genome.wustl.edu	37	21	47627461	47627461	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	21	47627461	47627461	C	T	SNP	LSS	ENST00000356396	human	ensembl	74_37	-1	known	missense	c.1348	p.G450S	1.000	superfamily_Terpenoid_cyclase/PrenylTrfase,tigrfam_Squalene_cyclase	pfam_Prenyltrans,superfamily_Terpenoid_cyclase/PrenylTrfase,tigrfam_Squalene_cyclase	-	no_errors	LSS	HGNC	ENSG00000160285	tier1	-	-	117	0	0.00	49	31	38.75
MAP3K12	0	genome.wustl.edu	37	12	53877411	53877411	+	Silent	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	12	53877411	53877411	G	T	SNP	MAP3K12	ENST00000267079	human	ensembl	74_37	-1	known	silent	c.1356	p.L452	0.999	pirsf_MAP3K12_MAP3K13	pirsf_MAP3K12_MAP3K13,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K12	HGNC	ENSG00000139625				13	0	0.00	19	2	9.52
MAP3K4	0	genome.wustl.edu	37	6	161514016	161514016	+	Silent	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	6	161514016	161514016	G	A	SNP	MAP3K4	ENST00000392142	human	ensembl	74_37	+1	known	silent	c.3276	p.A1092	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K4	HGNC	ENSG00000085511	tier1	-	-	57	0	0.00	54	46	46.00
MDC1	0	genome.wustl.edu	37	6	30672262	30672262	+	Missense_Mutation	SNP	C	C	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	6	30672262	30672262	C	G	SNP	MDC1	ENST00000376406	human	ensembl	74_37	-1	known	missense	c.4698	p.K1566N	0.000	NULL	pfam_FHA_dom,superfamily_BRCT_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_BRCT_dom,pfscan_FHA_dom	-	no_errors	MDC1	HGNC	ENSG00000137337	tier1	-	-	78	0	0.00	42	26	38.24
MEGF10	0	genome.wustl.edu	37	5	126732405	126732405	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	5	126732405	126732405	G	C	SNP	MEGF10	ENST00000274473	human	ensembl	74_37	+1	known	missense	c.594	p.Q198H	1.000	pfam_EGF_extracell,smart_EG-like_dom,smart_EGF_laminin,pfscan_EG-like_dom	pfam_EGF_laminin,pfam_EGF_extracell,superfamily_Proteinase_amylase_inhib_dom,smart_EG-like_dom,smart_EGF_laminin,pfscan_EG-like_dom,pfscan_EMI_domain	-	no_errors	MEGF10	HGNC	ENSG00000145794				100	0	0.00	41	3	6.82
MERTK	0	genome.wustl.edu	37	2	112786094	112786094	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	2	112786094	112786094	G	T	SNP	MERTK	ENST00000295408	human	ensembl	74_37	+1	known	missense	c.2653	p.A885S	0.001	superfamily_Rhodanese-like_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Rhodanese-like_dom,smart_Ig_sub,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MERTK	HGNC	ENSG00000153208	tier1	-	-	53	0	0.00	35	25	41.67
METTL5	0	genome.wustl.edu	37	2	170681016	170681016	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	2	170681016	170681016	G	T	SNP	METTL5	ENST00000260953	human	ensembl	74_37	-1	known	missense	c.92	p.T31N	1.000	NULL	pfam_Small_mtfrase_dom,pfam_Ribosomal-L11_MeTrfase_PrmA,pfam_RNA_methylase_dom,pfam_RNA_MeTrfase_RsmD,pfam_RNA_cap_Gua-N2-MeTrfase,pfam_Methyltransf_11	-	no_errors	METTL5	HGNC	ENSG00000138382	tier1	-	-	63	0	0.00	45	4	8.16
MICU2	0	genome.wustl.edu	37	13	22067385	22067385	+	RNA	SNP	T	T	C			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	13	22067385	22067385	T	C	SNP	MICU2	ENST00000460488	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.343	-	-	-	no_errors	MICU2	HGNC	ENSG00000165487	tier1	-	-	31	0	0.00	50	28	35.90
MIEF2	0	genome.wustl.edu	37	17	18166719	18166719	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	17	18166719	18166719	C	A	SNP	MIEF2	ENST00000395703	human	ensembl	74_37	+1	novel	missense	c.467	p.S156Y	0.002	NULL	NULL	-	no_errors	MIEF2	HGNC	ENSG00000177427	tier1	-	-	21	0	0.00	8	6	42.86
MIR1197	0	genome.wustl.edu	37	14	101491922	101491922	+	RNA	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	14	101491922	101491922	C	T	SNP	MIR1197	ENST00000408818	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MIR1197	HGNC	ENSG00000221745				52	0	0.00	75	4	5.06
MIR194-2	0	genome.wustl.edu	37	11	64658835	64658835	+	RNA	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	11	64658835	64658835	C	T	SNP	MIR194-2	ENST00000384864	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.845	-	-	-	no_errors	MIR194-2	HGNC	ENSG00000229719	tier1	-	-	74	0	0.00	27	17	38.64
MIR23B	0	genome.wustl.edu	37	9	97847577	97847577	+	RNA	SNP	C	C	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	9	97847577	97847577	C	G	SNP	MIR23B	ENST00000384832	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.676	-	-	-	no_errors	MIR23B	HGNC	ENSG00000207563	tier1	-	-	59	0	0.00	21	7	25.00
MKI67	0	genome.wustl.edu	37	10	129910413	129910413	+	Silent	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	10	129910413	129910413	C	T	SNP	MKI67	ENST00000368654	human	ensembl	74_37	-1	known	silent	c.1953	p.S651	0.352	NULL	pfam_K167R,pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	MKI67	HGNC	ENSG00000148773	tier1	rs142241283	-	36	0	0.00	52	24	31.58
MLLT4	0	genome.wustl.edu	37	6	168323558	168323558	+	Silent	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	6	168323558	168323558	C	T	SNP	MLLT4	ENST00000366806	human	ensembl	74_37	+1	known	silent	c.2910	p.H970	0.272	NULL	pfam_Ras-assoc,pfam_Dil_domain,pfam_PDZ,pfam_FHA_dom,superfamily_PDZ,superfamily_SMAD_FHA_domain,smart_Ras-assoc,smart_FHA_dom,smart_PDZ,pfscan_Dilute,pfscan_PDZ,pfscan_Ras-assoc	-	no_errors	MLLT4	HGNC	ENSG00000130396	tier1	-	-	22	0	0.00	29	18	38.30
MOCOS	0	genome.wustl.edu	37	18	33795865	33795865	+	Silent	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	18	33795865	33795865	C	T	SNP	MOCOS	ENST00000261326	human	ensembl	74_37	+1	known	silent	c.1722	p.V574	0.000	NULL	pfam_MOSC_N,pfam_MoCF_Sase_C,pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase,superfamily_Pyrv_Knase-like_insert_dom	-	no_errors	MOCOS	HGNC	ENSG00000075643	tier1	-	-	27	0	0.00	21	8	27.59
MOSPD1	0	genome.wustl.edu	37	X	134033227	134033227	+	RNA	DEL	T	T	-			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	X	134033227	134033227	T	-	DEL	MOSPD1	ENST00000462060	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	MOSPD1	HGNC	ENSG00000101928	tier1			33	0	0.00	46	5	9.80
MRPS25	0	genome.wustl.edu	37	3	15106578	15106578	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	3	15106578	15106578	C	T	SNP	MRPS25	ENST00000253686	human	ensembl	74_37	-1	known	missense	c.124	p.E42K	1.000	superfamily_Thioredoxin-like_fold,smart_Ribosome/NADH_DH	pfam_Ribosome/NADH_DH,superfamily_Thioredoxin-like_fold,smart_Ribosome/NADH_DH	-	no_errors	MRPS25	HGNC	ENSG00000131368	tier1	-	-	127	0	0.00	47	8	14.55
MTMR4	0	genome.wustl.edu	37	17	56582201	56582201	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	17	56582201	56582201	C	T	SNP	MTMR4	ENST00000323456	human	ensembl	74_37	-1	known	missense	c.1238	p.R413H	1.000	pfscan_Tyr/Dual-sp_Pase	pfam_Myotubularin-like_Pase_dom,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel,pfscan_Tyr/Dual-sp_Pase	-	no_errors	MTMR4	HGNC	ENSG00000108389	tier1	-	-	126	0	0.00	71	6	7.79
MUC12	0	genome.wustl.edu	37	7	100634034	100634034	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	7	100634034	100634034	G	A	SNP	MUC12	ENST00000536621	human	ensembl	74_37	+1	known	missense	c.190	p.A64T	0.062	NULL	pfam_SEA_dom	-	no_errors	MUC12	HGNC	ENSG00000205277	tier1	-	-	80	0	0.00	66	33	33.33
MUC12	0	genome.wustl.edu	37	7	100637915	100637915	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	7	100637915	100637915	C	A	SNP	MUC12	ENST00000536621	human	ensembl	74_37	+1	known	missense	c.4071	p.H1357Q	0.003	NULL	pfam_SEA_dom	-	no_errors	MUC12	HGNC	ENSG00000205277	tier1	-	-	57	0	0.00	9	35	79.55
MUC12	0	genome.wustl.edu	37	7	100637916	100637916	+	Missense_Mutation	SNP	A	A	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	7	100637916	100637916	A	G	SNP	MUC12	ENST00000536621	human	ensembl	74_37	+1	known	missense	c.4072	p.S1358G	0.019	NULL	pfam_SEA_dom	-	no_errors	MUC12	HGNC	ENSG00000205277	tier1	-	-	56	0	0.00	9	34	79.07
MUC13	0	genome.wustl.edu	37	3	124627023	124627023	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	3	124627023	124627023	G	A	SNP	MUC13	ENST00000311075	human	ensembl	74_37	-1	known	missense	c.1507	p.H503Y	0.014	NULL	pfam_SEA_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,pfscan_EG-like_dom	-	no_errors	MUC13	HGNC	ENSG00000173702	tier1	-	-	42	0	0.00	37	14	27.45
MUC16	0	genome.wustl.edu	37	19	9085519	9085519	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	19	9085519	9085519	G	T	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.6296	p.S2099Y	0.113	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	60	0	0.00	54	24	30.77
MYADM	0	genome.wustl.edu	37	19	54377604	54377604	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	19	54377604	54377604	C	T	SNP	MYADM	ENST00000336967	human	ensembl	74_37	+1	known	missense	c.821	p.S274L	0.000	pfam_Marvel	pfam_Marvel	-	no_errors	MYADM	HGNC	ENSG00000179820	tier1	-	-	72	0	0.00	22	12	35.29
MYCBP2	0	genome.wustl.edu	37	13	77657220	77657220	+	Silent	SNP	T	T	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	13	77657220	77657220	T	G	SNP	MYCBP2	ENST00000407578	human	ensembl	74_37	-1	known	silent	c.10983	p.S3661	0.032	superfamily_ARM-type_fold	pfam_PHR,pfam_Reg_chr_condens,pfam_Filamin/ABP280_repeat-like,superfamily_RCC1/BLIP-II,superfamily_Galactose-bd-like,superfamily_Ig_E-set,superfamily_ARM-type_fold,smart_Znf_RING,pfscan_Filamin/ABP280_repeat-like,pfscan_Znf_RING,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	MYCBP2	HGNC	ENSG00000005810	tier1	-	-	56	0	0.00	34	28	45.16
MYH7	0	genome.wustl.edu	37	14	23894041	23894041	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	14	23894041	23894041	C	A	SNP	MYH7	ENST00000355349	human	ensembl	74_37	-1	known	missense	c.2616	p.E872D	1.000	NULL	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH7	HGNC	ENSG00000092054	tier1	-	-	33	0	0.00	17	5	22.73
MYO1A	0	genome.wustl.edu	37	12	57435072	57435072	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	12	57435072	57435072	C	A	SNP	MYO1A	ENST00000300119	human	ensembl	74_37	-1	known	missense	c.1165	p.D389Y	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail_2,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	MYO1A	HGNC	ENSG00000166866	tier1	-	-	26	0	0.00	35	4	10.00
N4BP2	0	genome.wustl.edu	37	4	40144359	40144359	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	4	40144359	40144359	G	A	SNP	N4BP2	ENST00000261435	human	ensembl	74_37	+1	known	missense	c.4852	p.D1618N	0.000	pfam_DUF1771	pfam_DUF1771,pfam_Smr/MutS2_C,superfamily_P-loop_NTPase,superfamily_UBA-like,smart_Smr/MutS2_C,pfscan_CUE,pfscan_Smr/MutS2_C	-	no_errors	N4BP2	HGNC	ENSG00000078177	tier1	-	-	52	0	0.00	46	30	39.47
NAALADL2	0	genome.wustl.edu	37	3	175165132	175165132	+	Silent	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	3	175165132	175165132	G	A	SNP	NAALADL2	ENST00000454872	human	ensembl	74_37	+1	known	silent	c.1206	p.A402	0.385	NULL	superfamily_TFR-like_dimer_dom	-	no_errors	NAALADL2	HGNC	ENSG00000177694	tier1	-	-	31	0	0.00	27	15	35.71
NAV2	0	genome.wustl.edu	37	11	19967974	19967974	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	11	19967974	19967974	G	A	SNP	NAV2	ENST00000396087	human	ensembl	74_37	+1	known	missense	c.2243	p.R748Q	1.000	NULL	pfam_CH-domain,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV2	HGNC	ENSG00000166833	tier1	-	-	77	0	0.00	45	26	36.62
NBPF12	0	genome.wustl.edu	37	1	146465946	146465946	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	1	146465946	146465946	C	T	SNP	NBPF12	ENST00000442909	human	ensembl	74_37	+1	novel	missense	c.9821	p.S3274L	0.003	pfam_NBPF_dom	pfam_NBPF_dom	-	no_errors	NBPF12	HGNC	ENSG00000186275	tier1	rs200985386	-	49	0	0.00	13	45	77.59
NCAM2	0	genome.wustl.edu	37	21	22746285	22746285	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	21	22746285	22746285	G	T	SNP	NCAM2	ENST00000400546	human	ensembl	74_37	+1	known	missense	c.1147	p.A383S	1.000	pfam_Ig_I-set,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom,prints_Neural_cell_adh	-	no_errors	NCAM2	HGNC	ENSG00000154654	tier1	-	-	57	0	0.00	23	17	42.50
NCAPD3	0	genome.wustl.edu	37	11	134073578	134073578	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	11	134073578	134073578	G	A	SNP	NCAPD3	ENST00000534548	human	ensembl	74_37	-1	known	missense	c.1439	p.S480L	0.007	superfamily_ARM-type_fold,pirsf_NCAPD3	superfamily_ARM-type_fold,pirsf_NCAPD3	-	no_errors	NCAPD3	HGNC	ENSG00000151503	tier1	rs201688313	-	63	0	0.00	39	24	38.10
NCOA2	0	genome.wustl.edu	37	8	71075774	71075774	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	8	71075774	71075774	G	T	SNP	NCOA2	ENST00000452400	human	ensembl	74_37	-1	known	missense	c.758	p.A253E	1.000	pirsf_Nuclear_rcpt_coactivator	pfam_DUF1518,pfam_SRC-1,pfam_Nuc_rcpt_coact_Ncoa-typ,pfam_PAS_fold,superfamily_PAS,superfamily_Nuc_rcpt_coact,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,pirsf_Nuclear_rcpt_coactivator,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	NCOA2	HGNC	ENSG00000140396	tier1	-	-	59	0	0.00	70	4	5.41
NDST3	0	genome.wustl.edu	37	4	118975223	118975223	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	4	118975223	118975223	G	A	SNP	NDST3	ENST00000296499	human	ensembl	74_37	+1	known	missense	c.158	p.G53D	0.976	pfam_Heparan_SO4_deacetylase	pfam_Heparan_SO4_deacetylase,pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	NDST3	HGNC	ENSG00000164100	tier1	-	-	34	0	0.00	22	16	42.11
NDST3	0	genome.wustl.edu	37	4	118975378	118975378	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	4	118975378	118975378	C	A	SNP	NDST3	ENST00000296499	human	ensembl	74_37	+1	known	missense	c.313	p.Q105K	1.000	pfam_Heparan_SO4_deacetylase	pfam_Heparan_SO4_deacetylase,pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	NDST3	HGNC	ENSG00000164100				23	0	0.00	55	3	5.17
NEK3	0	genome.wustl.edu	37	13	52718058	52718058	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	13	52718058	52718058	C	T	SNP	NEK3	ENST00000452082	human	ensembl	74_37	-1	known	missense	c.932	p.R311K	0.035	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	NEK3	HGNC	ENSG00000136098				28	0	0.00	52	6	10.34
NEK3	0	genome.wustl.edu	37	13	52718059	52718059	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	13	52718059	52718059	T	C	SNP	NEK3	ENST00000452082	human	ensembl	74_37	-1	known	missense	c.931	p.R311G	0.038	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	NEK3	HGNC	ENSG00000136098				28	0	0.00	53	5	8.62
NEK4	0	genome.wustl.edu	37	3	52773550	52773550	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	3	52773550	52773550	G	A	SNP	NEK4	ENST00000233027	human	ensembl	74_37	-1	known	missense	c.2194	p.P732S	0.738	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	NEK4	HGNC	ENSG00000114904	tier1	-	-	64	0	0.00	59	24	28.92
NEUROD4	0	genome.wustl.edu	37	12	55420674	55420674	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	12	55420674	55420674	G	T	SNP	NEUROD4	ENST00000242994	human	ensembl	74_37	+1	known	missense	c.451	p.G151W	1.000	pfam_Neurogenic_DUF,superfamily_bHLH_dom,pirsf_TF_bHLH_NeuroD	pfam_Neurogenic_DUF,pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pirsf_TF_bHLH_NeuroD,pfscan_bHLH_dom	-	no_errors	NEUROD4	HGNC	ENSG00000123307				25	0	0.00	34	2	5.56
NFATC4	0	genome.wustl.edu	37	14	24839449	24839449	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	14	24839449	24839449	C	T	SNP	NFATC4	ENST00000413692	human	ensembl	74_37	+1	known	missense	c.1034	p.P345L	1.000	NULL	pfam_RHD,pfam_IPT,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NFAT	-	no_errors	NFATC4	HGNC	ENSG00000100968	tier1	-	-	92	0	0.00	25	22	46.81
NKAIN4	0	genome.wustl.edu	37	20	61872617	61872617	+	RNA	DEL	T	T	-			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	20	61872617	61872617	T	-	DEL	NKAIN4	ENST00000466885	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NKAIN4	HGNC	ENSG00000101198	tier1			9	0	0.00	15	4	21.05
NPHS1	0	genome.wustl.edu	37	19	36341899	36341899	+	Frame_Shift_Del	DEL	C	C	-			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	19	36341899	36341899	C	-	DEL	NPHS1	ENST00000378910	human	ensembl	74_37	-1	known	frame_shift_del	c.490	p.D164fs	0.572	pfam_CD80_C2-set	pfam_CD80_C2-set,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	NPHS1	HGNC	ENSG00000161270	tier1			37	0	0.00	23	2	8.00
NPIPB6	0	genome.wustl.edu	37	16	28374090	28374090	+	Silent	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	16	28374090	28374090	G	A	SNP	NPIPB6	ENST00000532254	human	ensembl	74_37	-1	novel	silent	c.54	p.S18	0.039	NULL	NULL	-	no_errors	NPIPB6	HGNC	ENSG00000198156	tier1	-	-	224	0	0.00	105	83	44.15
NTM	0	genome.wustl.edu	37	11	131530879	131530880	+	RNA	INS	-	-	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	11	131530879	131530880	-	A	INS	NTM	ENST00000477098	human	ensembl	74_37	+1	putative	rna	NULL	NULL	1.000:0.999	-	-	-	no_errors	NTM	HGNC	ENSG00000182667	tier1			26	0	0.00	28	4	12.50
NUP85	0	genome.wustl.edu	37	17	73204645	73204645	+	Silent	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	17	73204645	73204645	G	A	SNP	NUP85	ENST00000245544	human	ensembl	74_37	+1	known	silent	c.57	p.K19	0.957	NULL	pfam_Nucleoporin_Nup85	-	no_errors	NUP85	HGNC	ENSG00000125450	tier1	-	-	71	0	0.00	67	28	29.47
OR10AG1	0	genome.wustl.edu	37	11	55735930	55735930	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	11	55735930	55735930	C	A	SNP	OR10AG1	ENST00000312345	human	ensembl	74_37	-1	known	missense	c.10	p.V4F	0.375	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10AG1	HGNC	ENSG00000174970				10	0	0.00	15	9	37.50
OR8K1	0	genome.wustl.edu	37	11	56113847	56113847	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	11	56113847	56113847	G	T	SNP	OR8K1	ENST00000279783	human	ensembl	74_37	+1	known	missense	c.333	p.E111D	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8K1	HGNC	ENSG00000150261				11	0	0.00	21	2	8.70
OTOG	0	genome.wustl.edu	37	11	17578812	17578812	+	Silent	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	11	17578812	17578812	C	T	SNP	OTOG	ENST00000399391	human	ensembl	74_37	+1	known	silent	c.843	p.T281	1.000	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_AbfB,pfam_TIL_dom,superfamily_AbfB,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom	-	no_errors	OTOG	HGNC	ENSG00000188162	tier1	-	-	40	0	0.00	20	6	23.08
OVCH1	0	genome.wustl.edu	37	12	29596332	29596332	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	12	29596332	29596332	C	T	SNP	OVCH1	ENST00000318184	human	ensembl	74_37	-1	known	missense	c.3119	p.R1040H	0.007	superfamily_CUB_dom	pfam_Peptidase_S1,pfam_CUB_dom,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,superfamily_CUB_dom,smart_Peptidase_S1,smart_CUB_dom,pfscan_CUB_dom,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	OVCH1	HGNC	ENSG00000187950	tier1	-	-	47	0	0.00	60	27	31.03
PAK7	0	genome.wustl.edu	37	20	9560912	9560912	+	Silent	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	20	9560912	9560912	C	A	SNP	PAK7	ENST00000353224	human	ensembl	74_37	-1	known	silent	c.870	p.S290	0.391	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_CRIB_dom,superfamily_Kinase-like_dom,smart_CRIB_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRIB_dom,pfscan_Prot_kinase_dom	-	no_errors	PAK7	HGNC	ENSG00000101349	tier1	-	-	75	0	0.00	52	25	32.47
PALD1	0	genome.wustl.edu	37	10	72292493	72292495	+	In_Frame_Del	DEL	GGA	GGA	-			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	GGA	GGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	10	72292493	72292495	GGA	-	DEL	PALD1	ENST00000263563	human	ensembl	74_37	+1	known	in_frame_del	c.750_752	p.E252in_frame_del	0.000:0.961:1.000	NULL	smart_Tyr_Pase_cat	-	no_errors	PALD1	HGNC	ENSG00000107719	tier1			55	0	0.00	21	8	27.59
PARP11	0	genome.wustl.edu	37	12	3935364	3935364	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	12	3935364	3935364	G	T	SNP	PARP11	ENST00000228820	human	ensembl	74_37	-1	known	missense	c.304	p.R102S	1.000	pfam_WWE-dom,pfscan_WWE-dom	pfam_Poly(ADP-ribose)pol_cat_dom,pfam_WWE-dom,pfscan_WWE-dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	PARP11	HGNC	ENSG00000111224				51	0	0.00	73	4	5.19
PAX4	0	genome.wustl.edu	37	7	127251730	127251730	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	7	127251730	127251730	G	T	SNP	PAX4	ENST00000341640	human	ensembl	74_37	-1	known	missense	c.748	p.Q250K	0.791	NULL	pfam_Paired_dom,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Paired_dom,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Paired_dom,prints_Paired_dom	-	no_errors	PAX4	HGNC	ENSG00000106331	tier1	-	-	22	0	0.00	21	11	34.38
PAXIP1	0	genome.wustl.edu	37	7	154760267	154760269	+	In_Frame_Del	DEL	CTG	CTG	-			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	CTG	CTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	7	154760267	154760269	CTG	-	DEL	PAXIP1	ENST00000397192	human	ensembl	74_37	-1	known	in_frame_del	c.1644_1642	p.Q548in_frame_del	0.709:0.971:0.997	NULL	pfam_BRCT_dom,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	-	no_errors	PAXIP1	HGNC	ENSG00000157212	tier1			57	0	0.00	26	3	10.34
PBDC1	0	genome.wustl.edu	37	X	75395330	75395330	+	Missense_Mutation	SNP	A	A	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	X	75395330	75395330	A	G	SNP	PBDC1	ENST00000373358	human	ensembl	74_37	+1	known	missense	c.179	p.Q60R	1.000	pfam_Put_polysacc_synth	pfam_Put_polysacc_synth	-	no_errors	PBDC1	HGNC	ENSG00000102390	tier1	-	-	35	0	0.00	49	4	7.55
PCDH11X	0	genome.wustl.edu	37	X	91873637	91873637	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	X	91873637	91873637	C	A	SNP	PCDH11X	ENST00000373094	human	ensembl	74_37	+1	known	missense	c.3742	p.P1248T	0.565	NULL	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH11X	HGNC	ENSG00000102290	tier1	-	-	43	0	0.00	8	16	66.67
PCDH15	0	genome.wustl.edu	37	10	56423942	56423942	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	10	56423942	56423942	C	A	SNP	PCDH15	ENST00000320301	human	ensembl	74_37	-1	known	missense	c.81	p.Q27H	0.845	NULL	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH15	HGNC	ENSG00000150275	tier1	-	-	47	0	0.00	41	17	29.31
PCDHA7	0	genome.wustl.edu	37	5	140215502	140215502	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	5	140215502	140215502	G	A	SNP	PCDHA7	ENST00000525929	human	ensembl	74_37	+1	known	missense	c.1534	p.A512T	0.983	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA7	HGNC	ENSG00000204963	tier1	-	-	352	0	0.00	146	51	25.89
PCDHB13	0	genome.wustl.edu	37	5	140594473	140594473	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	5	140594473	140594473	T	C	SNP	PCDHB13	ENST00000341948	human	ensembl	74_37	+1	known	missense	c.778	p.F260L	0.001	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB13	HGNC	ENSG00000187372	tier1	-	-	94	0	0.00	59	43	42.16
PCDHGB7	0	genome.wustl.edu	37	5	140797861	140797861	+	Silent	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	5	140797861	140797861	C	A	SNP	PCDHGB7	ENST00000398594	human	ensembl	74_37	+1	known	silent	c.435	p.S145	0.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB7	HGNC	ENSG00000254122	tier1	-	-	46	0	0.00	53	4	7.02
PCDHGC5	0	genome.wustl.edu	37	5	140871075	140871075	+	Silent	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	5	140871075	140871075	G	T	SNP	PCDHGC5	ENST00000252087	human	ensembl	74_37	+1	known	silent	c.2268	p.T756	0.010	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGC5	HGNC	ENSG00000240764				88	0	0.00	48	3	5.88
PCNT	0	genome.wustl.edu	37	21	47851826	47851826	+	Silent	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	21	47851826	47851826	G	A	SNP	PCNT	ENST00000359568	human	ensembl	74_37	+1	known	silent	c.8448	p.L2816	0.000	NULL	pfam_PACT_domain	-	no_errors	PCNT	HGNC	ENSG00000160299	tier1	-	-	42	0	0.00	16	20	55.56
PDE4DIP	0	genome.wustl.edu	37	1	145075752	145075752	+	Silent	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	1	145075752	145075752	C	T	SNP	PDE4DIP	ENST00000369348	human	ensembl	74_37	-1	known	silent	c.111	p.T37	0.000	NULL	pfam_Spindle_assoc	-	no_errors	PDE4DIP	HGNC	ENSG00000178104				153	0	0.00	80	6	6.98
PDIA3	0	genome.wustl.edu	37	15	44057747	44057747	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	15	44057747	44057747	G	T	SNP	PDIA3	ENST00000300289	human	ensembl	74_37	+1	known	missense	c.702	p.K234N	1.000	superfamily_Thioredoxin-like_fold,tigrfam_Prot_disulphide_isomerase	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold,prints_Thioredoxin,tigrfam_Prot_disulphide_isomerase,tigrfam_Disulphide_isomerase	-	no_errors	PDIA3	HGNC	ENSG00000167004				52	0	0.00	72	4	5.26
PGBD5	0	genome.wustl.edu	37	1	230498085	230498085	+	Silent	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	1	230498085	230498085	G	T	SNP	PGBD5	ENST00000321327	human	ensembl	74_37	-1	known	silent	c.355	p.R119	0.000	NULL	NULL	-	no_errors	PGBD5	HGNC	ENSG00000177614	tier1	-	-	85	0	0.00	56	4	6.67
PHACTR2	0	genome.wustl.edu	37	6	144110003	144110003	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	6	144110003	144110003	C	T	SNP	PHACTR2	ENST00000440869	human	ensembl	74_37	+1	known	missense	c.1801	p.R601C	1.000	NULL	pfam_RPEL_repeat,smart_RPEL_repeat,pfscan_RPEL_repeat	-	no_errors	PHACTR2	HGNC	ENSG00000112419	tier1	-	-	48	0	0.00	22	17	43.59
PHF1	0	genome.wustl.edu	37	6	33382137	33382137	+	Silent	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	6	33382137	33382137	G	T	SNP	PHF1	ENST00000374516	human	ensembl	74_37	+1	known	silent	c.870	p.L290	0.989	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Tudor,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF1	HGNC	ENSG00000112511	tier1	-	-	53	0	0.00	72	4	5.26
PHIP	0	genome.wustl.edu	37	6	79692782	79692782	+	Nonsense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	6	79692782	79692782	G	A	SNP	PHIP	ENST00000275034	human	ensembl	74_37	-1	known	nonsense	c.2590	p.Q864*	1.000	NULL	pfam_WD40_repeat,pfam_Bromodomain,superfamily_Quinonprotein_ADH-like_supfam,superfamily_Bromodomain,smart_WD40_repeat,smart_Bromodomain,pfscan_Bromodomain,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Bromodomain	-	no_errors	PHIP	HGNC	ENSG00000146247	tier1	-	-	34	0	0.00	30	18	37.50
PHIP	0	genome.wustl.edu	37	6	79692783	79692783	+	Silent	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	6	79692783	79692783	C	A	SNP	PHIP	ENST00000275034	human	ensembl	74_37	-1	known	silent	c.2589	p.L863	1.000	NULL	pfam_WD40_repeat,pfam_Bromodomain,superfamily_Quinonprotein_ADH-like_supfam,superfamily_Bromodomain,smart_WD40_repeat,smart_Bromodomain,pfscan_Bromodomain,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Bromodomain	-	no_errors	PHIP	HGNC	ENSG00000146247	tier1	-	-	34	0	0.00	31	18	36.73
PIEZO2	0	genome.wustl.edu	37	18	10736690	10736690	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	18	10736690	10736690	T	C	SNP	PIEZO2	ENST00000580640	human	ensembl	74_37	-1	novel	missense	c.4727	p.Y1576C	1.000	NULL	pfam_Piezo	-	no_errors	PIEZO2	HGNC	ENSG00000154864	tier1	-	-	32	0	0.00	27	12	30.77
PIF1	0	genome.wustl.edu	37	15	65108838	65108838	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	15	65108838	65108838	C	T	SNP	PIF1	ENST00000333425	human	ensembl	74_37	-1	known	missense	c.1801	p.V601I	1.000	superfamily_P-loop_NTPase	pfam_DNA_helicase_Pif1,pfam_DNA_helicase,superfamily_P-loop_NTPase	-	no_errors	PIF1	HGNC	ENSG00000140451	tier1	-	-	95	0	0.00	43	21	32.81
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	3	178952085	178952085	A	T	SNP	PIK3CA	ENST00000263967	human	ensembl	74_37	+1	known	missense	c.3140	p.H1047L	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	tier1	rs121913279	-	20	0	0.00	21	13	37.14
PLA2G12B	0	genome.wustl.edu	37	10	74701076	74701076	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	10	74701076	74701076	G	T	SNP	PLA2G12B	ENST00000373032	human	ensembl	74_37	-1	known	missense	c.317	p.P106Q	1.000	pfam_PLipase_A2_secretory_G12,superfamily_PLipase_A2_dom	pfam_PLipase_A2_secretory_G12,superfamily_PLipase_A2_dom	-	no_errors	PLA2G12B	HGNC	ENSG00000138308	tier1	-	-	49	0	0.00	45	4	8.16
PLCD1	0	genome.wustl.edu	37	3	38049856	38049856	+	Silent	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	3	38049856	38049856	G	T	SNP	PLCD1	ENST00000463876	human	ensembl	74_37	-1	known	silent	c.1968	p.V656	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_Pleckstrin_homology,smart_EF_hand_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pfscan_EF_hand_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCD1	HGNC	ENSG00000187091	tier1	-	-	122	0	0.00	60	4	6.25
PPFIBP2	0	genome.wustl.edu	37	11	7669640	7669640	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	11	7669640	7669640	C	A	SNP	PPFIBP2	ENST00000299492	human	ensembl	74_37	+1	known	missense	c.1669	p.Q557K	1.000	pfam_SAM_2,pfam_SAM_type1,superfamily_SAM/pointed,smart_SAM	pfam_SAM_2,pfam_SAM_type1,pfam_Integrase_Tn916-type_DNA-bd_N,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	PPFIBP2	HGNC	ENSG00000166387	tier1	-	-	28	0	0.00	18	13	40.62
PPP1R13B	0	genome.wustl.edu	37	14	104220545	104220545	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	14	104220545	104220545	G	A	SNP	PPP1R13B	ENST00000202556	human	ensembl	74_37	-1	known	missense	c.493	p.R165C	1.000	NULL	pfam_Ankyrin_rpt,pfam_SH3_domain,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	PPP1R13B	HGNC	ENSG00000088808	tier1	-	-	18	0	0.00	15	9	37.50
PPP1R3F	0	genome.wustl.edu	37	X	49137873	49137873	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	X	49137873	49137873	G	T	SNP	PPP1R3F	ENST00000055335	human	ensembl	74_37	+1	known	missense	c.1009	p.A337S	0.000	NULL	pfam_CBM_21,pfscan_CBM_21	-	no_errors	PPP1R3F	HGNC	ENSG00000049769	tier1	-	-	22	0	0.00	18	4	18.18
PPP1R9B	0	genome.wustl.edu	37	17	48211968	48211968	+	RNA	SNP	G	G	C			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	17	48211968	48211968	G	C	SNP	PPP1R9B	ENST00000501501	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.063	-	-	-	no_errors	PPP1R9B	HGNC	ENSG00000108819	tier1	-	-	92	0	0.00	57	5	8.06
PRIM2	0	genome.wustl.edu	37	6	57183284	57183284	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	6	57183284	57183284	C	T	SNP	PRIM2	ENST00000607273	human	ensembl	74_37	+1	known	missense	c.41	p.A14V	0.193	NULL	pfam_DNA_primase_lsu_euk/arc	-	no_errors	PRIM2	HGNC	ENSG00000146143	tier1	-	-	47	0	0.00	71	4	5.33
PRLHR	0	genome.wustl.edu	37	10	120354171	120354171	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	10	120354171	120354171	C	T	SNP	PRLHR	ENST00000239032	human	ensembl	74_37	-1	known	missense	c.586	p.V196M	0.014	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Prolrel_pep_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt	-	no_errors	PRLHR	HGNC	ENSG00000119973	tier1	-	-	33	0	0.00	13	6	31.58
PRPF8	0	genome.wustl.edu	37	17	1582171	1582171	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	17	1582171	1582171	C	T	SNP	PRPF8	ENST00000304992	human	ensembl	74_37	-1	known	missense	c.1604	p.R535K	1.000	pfam_PROCN,superfamily_Histone-fold	pfam_PROCN,pfam_PRP8_domainIV,pfam_Prp8_U6-snRNA-bd,pfam_PRO8NT,pfam_Prp8_U5-snRNA-bd,pfam_PROCT,pfam_RRM_spliceosomal_PrP8,pfam_JAB_MPN_dom,superfamily_Cupredoxin,superfamily_Histone-fold,smart_JAB_MPN_dom	-	no_errors	PRPF8	HGNC	ENSG00000174231	tier1	-	-	33	0	0.00	24	18	42.86
PRTG	0	genome.wustl.edu	37	15	55964703	55964703	+	Nonsense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	15	55964703	55964703	G	A	SNP	PRTG	ENST00000389286	human	ensembl	74_37	-1	known	nonsense	c.1981	p.Q661*	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	PRTG	HGNC	ENSG00000166450	tier1	-	-	63	0	0.00	45	26	36.62
PSMD9	0	genome.wustl.edu	37	12	122332686	122332686	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	12	122332686	122332686	G	T	SNP	PSMD9	ENST00000541212	human	ensembl	74_37	+1	known	missense	c.180	p.E60D	1.000	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ	-	no_errors	PSMD9	HGNC	ENSG00000110801				76	0	0.00	58	4	6.45
PTCD3	0	genome.wustl.edu	37	2	86352947	86352947	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	2	86352947	86352947	G	A	SNP	PTCD3	ENST00000254630	human	ensembl	74_37	+1	known	missense	c.895	p.E299K	0.998	NULL	NULL	-	no_errors	PTCD3	HGNC	ENSG00000132300				61	0	0.00	73	4	5.19
PTN	0	genome.wustl.edu	37	7	136936052	136936052	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	7	136936052	136936052	G	T	SNP	PTN	ENST00000348225	human	ensembl	74_37	-1	known	missense	c.376	p.L126M	1.000	pfam_PTN/MK_C_dom,superfamily_PTN/MK_diS,smart_Midkine_heparin-bd_GF,prints_Midkine_heparin-bd_GF	pfam_PTN/MK_C_dom,pfam_PTN/MK_N_dom,superfamily_PTN/MK_diS,smart_Midkine_heparin-bd_GF,prints_Midkine_heparin-bd_GF	-	no_errors	PTN	HGNC	ENSG00000105894	tier1	-	-	55	0	0.00	39	18	31.58
PVRL1	0	genome.wustl.edu	37	11	119535970	119535970	+	Silent	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	11	119535970	119535970	C	T	SNP	PVRL1	ENST00000264025	human	ensembl	74_37	-1	known	silent	c.1041	p.R347	1.000	NULL	pfam_CD80_C2-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	PVRL1	HGNC	ENSG00000110400	tier1	-	-	25	0	0.00	15	9	37.50
PWP1	0	genome.wustl.edu	37	12	108082471	108082471	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	12	108082471	108082471	C	T	SNP	PWP1	ENST00000412830	human	ensembl	74_37	+1	known	missense	c.211	p.R71C	0.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	PWP1	HGNC	ENSG00000136045	tier1	-	-	35	0	0.00	33	13	28.26
PWWP2B	0	genome.wustl.edu	37	10	134218219	134218219	+	Missense_Mutation	SNP	A	A	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	10	134218219	134218219	A	T	SNP	PWWP2B	ENST00000305233	human	ensembl	74_37	+1	known	missense	c.215	p.E72V	0.006	NULL	pfam_PWWP_dom,smart_PWWP_dom,pfscan_PWWP_dom	-	no_errors	PWWP2B	HGNC	ENSG00000171813	tier1	-	-	25	0	0.00	11	10	47.62
PXDNL	0	genome.wustl.edu	37	8	52366270	52366270	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	8	52366270	52366270	G	T	SNP	PXDNL	ENST00000356297	human	ensembl	74_37	-1	known	missense	c.1058	p.A353D	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Haem_peroxidase_animal,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_VWF_C,pfam_Leu-rich_rpt,superfamily_Haem_peroxidase,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_VWF_C,prints_Haem_peroxidase_animal_subgr,pfscan_VWF_C,pfscan_Haem_peroxidase_animal,pfscan_Ig-like_dom	-	no_errors	PXDNL	HGNC	ENSG00000147485	tier1	-	-	46	0	0.00	42	18	30.00
PXN-AS1	0	genome.wustl.edu	37	12	120648834	120648834	+	RNA	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	12	120648834	120648834	G	T	SNP	PXN-AS1	ENST00000535200	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PXN-AS1	HGNC	ENSG00000255857	tier1	-	-	23	0	0.00	9	24	72.73
PYDC1	0	genome.wustl.edu	37	16	31228224	31228224	+	Silent	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	16	31228224	31228224	G	A	SNP	PYDC1	ENST00000302964	human	ensembl	74_37	-1	known	silent	c.126	p.G42	0.000	pfam_DAPIN,superfamily_DEATH-like_dom,pfscan_DAPIN	pfam_DAPIN,superfamily_DEATH-like_dom,pfscan_DAPIN	-	no_errors	PYDC1	HGNC	ENSG00000169900	tier1	-	-	56	0	0.00	18	10	35.71
RBM24	0	genome.wustl.edu	37	6	17291124	17291124	+	RNA	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	6	17291124	17291124	G	T	SNP	RBM24	ENST00000508508	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RBM24	HGNC	ENSG00000112183	tier1	-	-	22	0	0.00	20	15	42.86
RBM25	0	genome.wustl.edu	37	14	73576165	73576165	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	14	73576165	73576165	G	T	SNP	RBM25	ENST00000261973	human	ensembl	74_37	+1	known	nonsense	c.1657	p.E553*	1.000	NULL	pfam_PWI_dom,pfam_RRM_dom,superfamily_PWI_dom,smart_RRM_dom,smart_PWI_dom,pfscan_RRM_dom	-	no_errors	RBM25	HGNC	ENSG00000119707	tier1	-	-	41	0	0.00	45	4	8.16
RELN	0	genome.wustl.edu	37	7	103175830	103175830	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	7	103175830	103175830	G	A	SNP	RELN	ENST00000424685	human	ensembl	74_37	-1	known	missense	c.7282	p.R2428W	1.000	superfamily_Sialidases	pfam_EGF_extracell,pfam_Reeler_dom,pfam_BNR_rpt,superfamily_Sialidases,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Reeler_dom	-	no_errors	RELN	HGNC	ENSG00000189056				39	0	0.00	38	2	5.00
RGS22	0	genome.wustl.edu	37	8	101074951	101074951	+	Missense_Mutation	SNP	A	A	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	8	101074951	101074951	A	G	SNP	RGS22	ENST00000360863	human	ensembl	74_37	-1	known	missense	c.1382	p.L461P	1.000	superfamily_Regulat_G_prot_signal_superfam	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam	-	no_errors	RGS22	HGNC	ENSG00000132554	tier1	-	-	11	0	0.00	42	7	14.29
RHO	0	genome.wustl.edu	37	3	129251606	129251606	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	3	129251606	129251606	G	A	SNP	RHO	ENST00000296271	human	ensembl	74_37	+1	known	missense	c.927	p.M309I	1.000	pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_Rhodopsin_N,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Rhodopsin,prints_GPCR_Rhodpsn,prints_Opsin	-	no_errors	RHO	HGNC	ENSG00000163914	tier1	-	-	50	0	0.00	14	12	46.15
RHOA	0	genome.wustl.edu	37	3	49412922	49412922	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	3	49412922	49412922	T	C	SNP	RHOA	ENST00000418115	human	ensembl	74_37	-1	known	missense	c.101	p.Y34C	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RHOA	HGNC	ENSG00000067560	tier1	-	-	49	0	0.00	49	13	20.97
RNPEPL1	0	genome.wustl.edu	37	2	241513671	241513671	+	Silent	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	2	241513671	241513671	C	T	SNP	RNPEPL1	ENST00000270357	human	ensembl	74_37	+1	known	silent	c.387	p.F129	0.780	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	pfam_Peptidase_M1_C,pfam_Peptidase_M1_N,superfamily_ARM-type_fold,prints_Peptidase_M1_N	-	no_errors	RNPEPL1	HGNC	ENSG00000142327	tier1	-	-	55	0	0.00	18	12	40.00
RPAP1	0	genome.wustl.edu	37	15	41813145	41813145	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	15	41813145	41813145	T	C	SNP	RPAP1	ENST00000304330	human	ensembl	74_37	-1	known	missense	c.3239	p.E1080G	0.930	NULL	pfam_RNA_pol_II_AP1_C,pfam_RNA_pol_II_AP1_N,superfamily_ARM-type_fold	-	no_errors	RPAP1	HGNC	ENSG00000103932				162	0	0.00	41	4	8.89
RRP9	0	genome.wustl.edu	37	3	51968680	51968680	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	3	51968680	51968680	C	T	SNP	RRP9	ENST00000232888	human	ensembl	74_37	-1	known	missense	c.1147	p.A383T	0.997	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	RRP9	HGNC	ENSG00000114767				41	0	0.00	23	2	8.00
S1PR4	0	genome.wustl.edu	37	19	3179168	3179168	+	Silent	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	19	3179168	3179168	C	T	SNP	S1PR4	ENST00000246115	human	ensembl	74_37	+1	known	silent	c.378	p.F126	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_S1P_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_EDG6_rcpt,prints_S1P_rcpt,prints_GPCR_Rhodpsn	-	no_errors	S1PR4	HGNC	ENSG00000125910	tier1	-	-	26	0	0.00	4	7	63.64
SCAP	0	genome.wustl.edu	37	3	47467001	47467001	+	Silent	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	3	47467001	47467001	G	A	SNP	SCAP	ENST00000265565	human	ensembl	74_37	-1	known	silent	c.1011	p.F337	1.000	pfam_Patched,pfscan_SSD	pfam_Patched,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_SSD,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	SCAP	HGNC	ENSG00000114650				55	0	0.00	34	2	5.56
SEC14L2	0	genome.wustl.edu	37	22	30812323	30812323	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	22	30812323	30812323	C	T	SNP	SEC14L2	ENST00000312932	human	ensembl	74_37	+1	known	missense	c.1012	p.P338S	0.021	superfamily_GOLD,pfscan_GOLD	pfam_CRAL-TRIO_dom,pfam_CRAL/TRIO_N_dom,superfamily_CRAL-TRIO_dom,superfamily_GOLD,superfamily_CRAL/TRIO_N_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_GOLD,prints_CRAL-bd_toc_tran	-	no_errors	SEC14L2	HGNC	ENSG00000100003				52	0	0.00	51	3	5.56
SEMA3A	0	genome.wustl.edu	37	7	83591086	83591086	+	Silent	SNP	T	T	C			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	7	83591086	83591086	T	C	SNP	SEMA3A	ENST00000265362	human	ensembl	74_37	-1	known	silent	c.1917	p.L639	0.001	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Semap_dom,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Ig_sub,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA3A	HGNC	ENSG00000075213	tier1	-	-	35	0	0.00	30	19	38.78
SENP8	0	genome.wustl.edu	37	15	72432600	72432600	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	15	72432600	72432600	G	T	SNP	SENP8	ENST00000340912	human	ensembl	74_37	+1	known	missense	c.636	p.K212N	0.699	NULL	pfam_Peptidase_C48,pfscan_Peptidase_C48	-	no_errors	SENP8	HGNC	ENSG00000166192	tier1	-	-	8	0	0.00	19	8	29.63
SERPINA9	0	genome.wustl.edu	37	14	94935585	94935585	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	14	94935585	94935585	G	A	SNP	SERPINA9	ENST00000337425	human	ensembl	74_37	-1	known	missense	c.647	p.T216M	0.250	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINA9	HGNC	ENSG00000170054	tier1	-	-	56	0	0.00	16	18	52.94
SHISA6	0	genome.wustl.edu	37	17	11459150	11459150	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	17	11459150	11459150	C	A	SNP	SHISA6	ENST00000441885	human	ensembl	74_37	+1	known	missense	c.1046	p.P349Q	1.000	NULL	NULL	-	no_errors	SHISA6	HGNC	ENSG00000188803	tier1	-	-	56	0	0.00	37	20	35.09
SHROOM2	0	genome.wustl.edu	37	X	9905301	9905301	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	X	9905301	9905301	C	T	SNP	SHROOM2	ENST00000380913	human	ensembl	74_37	+1	known	missense	c.3715	p.P1239S	1.000	NULL	pfam_ASD2,pfam_ASD1,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SHROOM2	HGNC	ENSG00000146950	tier1	-	-	62	0	0.00	11	19	63.33
SI	0	genome.wustl.edu	37	3	164735587	164735587	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	3	164735587	164735587	C	A	SNP	SI	ENST00000264382	human	ensembl	74_37	-1	known	missense	c.3595	p.G1199C	1.000	pfam_Glyco_hydro_31,superfamily_Gal_mutarotase_SF_dom	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom,smart_P_trefoil	-	no_errors	SI	HGNC	ENSG00000090402	tier1	-	-	45	0	0.00	35	21	37.50
SIX6	0	genome.wustl.edu	37	14	60976162	60976162	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	14	60976162	60976162	G	T	SNP	SIX6	ENST00000327720	human	ensembl	74_37	+1	known	missense	c.46	p.G16W	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	SIX6	HGNC	ENSG00000184302	tier1	-	-	42	0	0.00	14	8	36.36
SKIV2L2	0	genome.wustl.edu	37	5	54718789	54718789	+	Missense_Mutation	SNP	C	C	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	5	54718789	54718789	C	G	SNP	SKIV2L2	ENST00000230640	human	ensembl	74_37	+1	known	missense	c.3055	p.L1019V	1.000	pfam_DSH_C,pirsf_RNA_helicase_ATP-dep_SK12/DOB1	pfam_DSH_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pirsf_RNA_helicase_ATP-dep_SK12/DOB1,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SKIV2L2	HGNC	ENSG00000039123	tier1	-	-	24	0	0.00	43	17	28.33
SKOR1	0	genome.wustl.edu	37	15	68119388	68119388	+	Frame_Shift_Del	DEL	A	A	-			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	15	68119388	68119388	A	0	DEL	SKOR1	ENST00000380035	human	ensembl	74_37	+1	known	frame_shift_del	c.1222	p.K409fs	1.000	NULL	pfam_Transform_Ski,pfam_c-SKI_SMAD4-bd_dom,superfamily_DNA-bd_dom_put,superfamily_SAND_dom-like	-	no_errors	SKOR1	HGNC	ENSG00000188779				16	0	0.00	4	2	33.33
SLC17A6	0	genome.wustl.edu	37	11	22360142	22360142	+	Frame_Shift_Del	DEL	A	A	-			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	11	22360142	22360142	A	-	DEL	SLC17A6	ENST00000263160	human	ensembl	74_37	+1	known	frame_shift_del	c.63	p.K22fs	0.999	NULL	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC17A6	HGNC	ENSG00000091664	tier1			39	0	0.00	38	2	5.00
SLC19A3	0	genome.wustl.edu	37	2	228566913	228566913	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	2	228566913	228566913	C	A	SNP	SLC19A3	ENST00000258403	human	ensembl	74_37	-1	known	missense	c.122	p.G41V	1.000	pfam_Folate_carrier,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pirsf_Folate_carrier,tigrfam_Folate_carrier	pfam_Folate_carrier,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pirsf_Folate_carrier,tigrfam_Folate_carrier	-	no_errors	SLC19A3	HGNC	ENSG00000135917	tier1	-	-	39	0	0.00	52	9	14.75
SLC24A1	0	genome.wustl.edu	37	15	65916439	65916439	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	15	65916439	65916439	G	A	SNP	SLC24A1	ENST00000261892	human	ensembl	74_37	+1	known	missense	c.21	p.M7I	0.040	tigrfam_K-dep_Na/Ca-exchanger	pfam_NaCa_Exmemb,tigrfam_K-dep_Na/Ca-exchanger,tigrfam_K/Na/Ca-exchanger	-	no_errors	SLC24A1	HGNC	ENSG00000074621	tier1	-	-	41	0	0.00	25	13	34.21
SMARCA4	0	genome.wustl.edu	37	19	11143993	11143993	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	19	11143993	11143993	C	T	SNP	SMARCA4	ENST00000358026	human	ensembl	74_37	+1	known	missense	c.3574	p.R1192C	1.000	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_SNF2_N,pfam_Bromodomain,pfam_BRK_domain,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,pfam_Gln-Leu-Gln_QLQ,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_Gln-Leu-Gln_QLQ,smart_HAS_subgr,smart_BRK_domain,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Bromodomain,prints_Bromodomain,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Bromodomain	-	no_errors	SMARCA4	HGNC	ENSG00000127616	tier1	-	-	53	0	0.00	20	20	48.78
SMC4	0	genome.wustl.edu	37	3	160138588	160138588	+	Silent	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	3	160138588	160138588	C	T	SNP	SMC4	ENST00000344722	human	ensembl	74_37	+1	known	silent	c.1918	p.L640	0.434	pfam_RecF/RecN/SMC_N,pfam_SMC_hinge,superfamily_P-loop_NTPase,superfamily_SMC_hinge,smart_SMC_hinge	pfam_RecF/RecN/SMC_N,pfam_SMC_hinge,superfamily_P-loop_NTPase,superfamily_SMC_hinge,superfamily_Chemotax_Me-accpt_rcpt_lig-bd,superfamily_Prefoldin,smart_SMC_hinge	-	no_errors	SMC4	HGNC	ENSG00000113810	tier1	-	-	52	0	0.00	70	37	34.58
SMG8	0	genome.wustl.edu	37	17	57288293	57288293	+	Missense_Mutation	SNP	A	A	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	17	57288293	57288293	A	G	SNP	SMG8	ENST00000300917	human	ensembl	74_37	+1	known	missense	c.881	p.H294R	1.000	pfam_Smg8/Smg9	pfam_Smg8/Smg9	-	no_errors	SMG8	HGNC	ENSG00000167447	tier1	-	-	33	0	0.00	19	12	38.71
SMIM21	0	genome.wustl.edu	37	18	73139414	73139414	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	18	73139414	73139414	C	A	SNP	SMIM21	ENST00000579022	human	ensembl	74_37	-1	known	missense	c.105	p.L35F	0.000	NULL	NULL	-	no_errors	SMIM21	HGNC	ENSG00000206026	tier1	-	-	66	0	0.00	50	19	27.54
SMPD1	0	genome.wustl.edu	37	11	6413037	6413037	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	11	6413037	6413037	G	A	SNP	SMPD1	ENST00000342245	human	ensembl	74_37	+1	known	missense	c.742	p.E248K	0.990	pfam_PEstase_dom,pirsf_Sphingomy_PDE	pfam_PEstase_dom,superfamily_Saposin-like,smart_SaposinB,pirsf_Sphingomy_PDE,pfscan_SaposinB	-	no_errors	SMPD1	HGNC	ENSG00000166311	tier1	rs200763423	-	27	0	0.00	10	6	37.50
SNHG14	0	genome.wustl.edu	37	15	25467313	25467313	+	RNA	SNP	C	C	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	15	25467313	25467313	C	G	SNP	SNHG14	ENST00000424208	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.253	-	-	-	no_errors	SNHG14	HGNC	ENSG00000224078	tier1	-	-	21	0	0.00	6	3	33.33
SNORD3D	0	genome.wustl.edu	37	17	19015738	19015738	+	RNA	SNP	T	T	C			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	17	19015738	19015738	T	C	SNP	SNORD3D	ENST00000362793	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.097	-	-	-	no_errors	SNORD3D	HGNC	ENSG00000262202	tier1	-	-	41	0	0.00	18	5	21.74
SNRNP40	0	genome.wustl.edu	37	1	31732677	31732677	+	RNA	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	1	31732677	31732677	G	A	SNP	SNRNP40	ENST00000486941	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	SNRNP40	HGNC	ENSG00000060688	tier1	-	-	33	0	0.00	44	5	10.20
SORBS2	0	genome.wustl.edu	37	4	186583259	186583259	+	Silent	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	4	186583259	186583259	G	A	SNP	SORBS2	ENST00000284776	human	ensembl	74_37	-1	known	silent	c.93	p.L31	0.120	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_Sorb,superfamily_SH3_domain,smart_Sorb,smart_SH3_domain,pfscan_Sorb,pfscan_SH3_domain,prints_SH3_domain,prints_p67phox	-	no_errors	SORBS2	HGNC	ENSG00000154556				77	0	0.00	34	2	5.56
SPAG17	0	genome.wustl.edu	37	1	118514619	118514619	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	1	118514619	118514619	C	A	SNP	SPAG17	ENST00000336338	human	ensembl	74_37	-1	known	missense	c.6193	p.A2065S	0.170	NULL	NULL	-	no_errors	SPAG17	HGNC	ENSG00000155761	tier1	-	-	43	0	0.00	45	28	37.84
SPINT2	0	genome.wustl.edu	37	19	38780792	38780792	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	19	38780792	38780792	G	T	SNP	SPINT2	ENST00000301244	human	ensembl	74_37	+1	known	missense	c.425	p.C142F	1.000	pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,smart_Prot_inh_Kunz-m,pfscan_Prot_inh_Kunz-m	pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,smart_Prot_inh_Kunz-m,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	SPINT2	HGNC	ENSG00000167642	tier1	-	-	70	0	0.00	50	4	7.41
SPOPL	0	genome.wustl.edu	37	2	139308582	139308582	+	Missense_Mutation	SNP	T	T	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	2	139308582	139308582	T	A	SNP	SPOPL	ENST00000280098	human	ensembl	74_37	+1	known	missense	c.310	p.F104I	1.000	pfam_MATH,superfamily_TRAF-like,smart_MATH,pfscan_MATH	pfam_BTB_POZ,pfam_MATH,superfamily_TRAF-like,superfamily_BTB/POZ_fold,smart_MATH,smart_BTB/POZ-like,pfscan_BTB/POZ-like,pfscan_MATH	-	no_errors	SPOPL	HGNC	ENSG00000144228	tier1	-	-	28	0	0.00	50	22	30.56
SREBF1	0	genome.wustl.edu	37	17	17719808	17719808	+	Silent	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	17	17719808	17719808	G	A	SNP	SREBF1	ENST00000355815	human	ensembl	74_37	-1	known	silent	c.2100	p.A700	0.981	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	SREBF1	HGNC	ENSG00000072310	tier1	-	-	96	0	0.00	29	24	45.28
ST6GALNAC6	0	genome.wustl.edu	37	9	130656797	130656797	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	9	130656797	130656797	G	T	SNP	ST6GALNAC6	ENST00000542456	human	ensembl	74_37	-1	known	missense	c.98	p.A33E	1.000	NULL	pfam_Glyco_trans_29	-	no_errors	ST6GALNAC6	HGNC	ENSG00000160408	tier1	-	-	92	0	0.00	33	19	36.54
STAG3L5P-PVRIG2P-PILRB	0	genome.wustl.edu	37	7	99933888	99933888	+	RNA	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	7	99933888	99933888	C	T	SNP	STAG3L5P-PVRIG2P-PILRB	ENST00000310771	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.712	-	-	-	no_errors	STAG3L5P-PVRIG2P-PILRB	HGNC	ENSG00000272752	tier1	-	-	200	0	0.00	70	39	35.78
STK19	0	genome.wustl.edu	37	6	31948477	31948477	+	Silent	SNP	A	A	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	6	31948477	31948477	A	G	SNP	STK19	ENST00000375333	human	ensembl	74_37	+1	known	silent	c.960	p.E320	0.997	pfam_Ser/Thr_kinase_19	pfam_Ser/Thr_kinase_19	-	no_errors	STK19	HGNC	ENSG00000204344	tier1	rs7743469	-	83	0	0.00	56	10	15.15
STK4	0	genome.wustl.edu	37	20	43607120	43607120	+	Silent	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	20	43607120	43607120	G	A	SNP	STK4	ENST00000372806	human	ensembl	74_37	+1	known	silent	c.153	p.E51	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Mst1_SARAH_domain,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SARAH_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	STK4	HGNC	ENSG00000101109	tier1	-	-	37	0	0.00	48	33	40.74
SYNE1	0	genome.wustl.edu	37	6	152680459	152680459	+	Missense_Mutation	SNP	C	C	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	6	152680459	152680459	C	G	SNP	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	missense	c.10434	p.E3478D	0.993	superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018				78	0	0.00	96	6	5.88
SYNE1	0	genome.wustl.edu	37	6	152751308	152751308	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	6	152751308	152751308	G	A	SNP	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	missense	c.4727	p.A1576V	0.994	superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018				33	0	0.00	51	4	7.27
SYTL2	0	genome.wustl.edu	37	11	85435209	85435209	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	11	85435209	85435209	G	T	SNP	SYTL2	ENST00000359152	human	ensembl	74_37	-1	known	missense	c.3863	p.T1288K	0.000	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	SYTL2	HGNC	ENSG00000137501				16	0	0.00	61	4	6.15
TBC1D22B	0	genome.wustl.edu	37	6	37281657	37281657	+	Silent	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	6	37281657	37281657	C	T	SNP	TBC1D22B	ENST00000373491	human	ensembl	74_37	+1	known	silent	c.1155	p.S385	1.000	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D22B	HGNC	ENSG00000065491				47	0	0.00	59	4	6.35
TBC1D31	0	genome.wustl.edu	37	8	124140537	124140537	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	8	124140537	124140537	G	A	SNP	TBC1D31	ENST00000287380	human	ensembl	74_37	+1	known	missense	c.1901	p.R634Q	1.000	superfamily_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_Rab-GTPase-TBC_dom,smart_WD40_repeat,pfscan_Rab-GTPase-TBC_dom,pfscan_WD40_repeat_dom	-	no_errors	TBC1D31	HGNC	ENSG00000156787	tier1	-	-	18	0	0.00	55	23	29.49
TBC1D5	0	genome.wustl.edu	37	3	17470011	17470011	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	3	17470011	17470011	C	A	SNP	TBC1D5	ENST00000253692	human	ensembl	74_37	-1	known	missense	c.98	p.G33V	0.996	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D5	HGNC	ENSG00000131374	tier1	-	-	86	0	0.00	89	60	40.27
TCP10	0	genome.wustl.edu	37	6	167794750	167794750	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	6	167794750	167794750	T	G	SNP	TCP10	ENST00000397829	human	ensembl	74_37	-1	known	missense	c.138	p.R46S	0.000	NULL	NULL	-	no_errors	TCP10	HGNC	ENSG00000203690	tier1	-	-	32	0	0.00	8	6	42.86
TENM4	0	genome.wustl.edu	37	11	78369429	78369429	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	11	78369429	78369429	G	T	SNP	TENM4	ENST00000278550	human	ensembl	74_37	-1	known	missense	c.7984	p.R2662S	1.000	NULL	pfam_Ten_N,pfam_EGF_extracell,pfam_YD,superfamily_CarboxyPept-like_regulatory,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM4	HGNC	ENSG00000149256	tier1	-	-	42	0	0.00	21	13	37.14
TET1	0	genome.wustl.edu	37	10	70332885	70332885	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	10	70332885	70332885	G	T	SNP	TET1	ENST00000373644	human	ensembl	74_37	+1	known	nonsense	c.790	p.G264*	0.986	NULL	pfam_Znf_CXXC,pfscan_Znf_CXXC	-	no_errors	TET1	HGNC	ENSG00000138336				67	0	0.00	62	4	6.06
TFAP2A	0	genome.wustl.edu	37	6	10400783	10400783	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	6	10400783	10400783	C	A	SNP	TFAP2A	ENST00000379604	human	ensembl	74_37	-1	known	missense	c.923	p.C308F	1.000	pfam_TF_AP2_C	pfam_TF_AP2_C,prints_TF_AP2_C,prints_TF_AP2_alpha_N	-	no_errors	TFAP2A	HGNC	ENSG00000137203	tier1	-	-	40	0	0.00	32	11	25.58
TGFBR1	0	genome.wustl.edu	37	9	101907161	101907161	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	9	101907161	101907161	G	A	SNP	TGFBR1	ENST00000374994	human	ensembl	74_37	+1	known	missense	c.1121	p.G374E	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_TGF_beta_rcpt_GS,pfam_Activin_rcpt,superfamily_Kinase-like_dom,superfamily_Quinolinate_PRibosylTrfase_C,smart_TGF_beta_rcpt_GS,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TGFBR1	HGNC	ENSG00000106799	tier1	-	-	52	0	0.00	41	21	33.87
THSD7B	0	genome.wustl.edu	37	2	138033559	138033559	+	Silent	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	2	138033559	138033559	C	A	SNP	THSD7B	ENST00000272643	human	ensembl	74_37	+1	known	silent	c.2463	p.G821	0.190	superfamily_Thrombospondin_1_rpt	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD7B	HGNC	ENSG00000144229	tier1	-	-	68	0	0.00	49	40	44.94
TJP3	0	genome.wustl.edu	37	19	3734314	3734314	+	Silent	SNP	T	T	C			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	19	3734314	3734314	T	C	SNP	TJP3	ENST00000262968	human	ensembl	74_37	+1	known	silent	c.966	p.S322	0.000	NULL	pfam_PDZ,pfam_SH3_2,pfam_GK/Ca_channel_bsu,superfamily_PDZ,superfamily_P-loop_NTPase,superfamily_SH3_domain,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like,prints_ZonOcculS3,prints_ZonOcculdens	-	no_errors	TJP3	HGNC	ENSG00000105289	tier1	-	-	122	0	0.00	59	5	7.81
TMA7	0	genome.wustl.edu	37	3	48482033	48482033	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	3	48482033	48482033	C	T	SNP	TMA7	ENST00000438607	human	ensembl	74_37	+1	known	missense	c.155	p.P52L	1.000	pfam_TMA7	pfam_TMA7	-	no_errors	TMA7	HGNC	ENSG00000232112	tier1	-	-	85	0	0.00	28	12	30.00
TMEM101	0	genome.wustl.edu	37	17	42092301	42092301	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	17	42092301	42092301	G	T	SNP	TMEM101	ENST00000206380	human	ensembl	74_37	-1	known	nonsense	c.20	p.S7*	1.000	NULL	NULL	-	no_errors	TMEM101	HGNC	ENSG00000091947	tier1	-	-	52	0	0.00	11	15	57.69
TMEM161A	0	genome.wustl.edu	37	19	19243553	19243553	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	19	19243553	19243553	C	T	SNP	TMEM161A	ENST00000162044	human	ensembl	74_37	-1	known	missense	c.199	p.G67S	1.000	pfam_Transmembrane_161A/B	pfam_Transmembrane_161A/B	-	no_errors	TMEM161A	HGNC	ENSG00000064545	tier1	-	-	55	0	0.00	23	12	34.29
TMEM35	0	genome.wustl.edu	37	X	100349693	100349693	+	Silent	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	X	100349693	100349693	G	T	SNP	TMEM35	ENST00000372930	human	ensembl	74_37	+1	known	silent	c.252	p.G84	0.383	NULL	NULL	-	no_errors	TMEM35	HGNC	ENSG00000126950				24	0	0.00	19	4	17.39
TMEM72	0	genome.wustl.edu	37	10	45430542	45430542	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	10	45430542	45430542	C	T	SNP	TMEM72	ENST00000544540	human	ensembl	74_37	+1	known	missense	c.434	p.P145L	0.105	NULL	NULL	-	no_errors	TMEM72	HGNC	ENSG00000187783	tier1	-	-	33	0	0.00	17	7	29.17
TP53	0	genome.wustl.edu	37	17	7577120	7577120	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	17	7577120	7577120	C	T	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.818	p.R273H	0.864	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	rs28934576	GMAF=0.0005	36	0	0.00	19	14	42.42
TPH1	0	genome.wustl.edu	37	11	18062306	18062306	+	Missense_Mutation	SNP	T	T	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	11	18062306	18062306	T	A	SNP	TPH1	ENST00000341556	human	ensembl	74_37	-1	known	missense	c.4	p.I2F	1.000	pirsf_Tyrosine_3-monooxygenase-like	pfam_Aromatic-AA_hydroxylase_C,pfam_ACT_dom,superfamily_Aromatic-AA_hydroxylase_C,pirsf_Tyrosine_3-monooxygenase-like,prints_Aromatic-AA_hydroxylase_C,tigrfam_Trp_5_mOase	-	no_errors	TPH1	HGNC	ENSG00000129167	tier1	-	-	59	0	0.00	40	40	50.00
TRAF3IP1	0	genome.wustl.edu	37	2	239242647	239242647	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	2	239242647	239242647	C	T	SNP	TRAF3IP1	ENST00000373327	human	ensembl	74_37	+1	known	missense	c.1034	p.S345L	0.570	NULL	NULL	-	no_errors	TRAF3IP1	HGNC	ENSG00000204104				75	0	0.00	71	4	5.33
TRIB3	0	genome.wustl.edu	37	20	377203	377203	+	Nonsense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	20	377203	377203	C	T	SNP	TRIB3	ENST00000422053	human	ensembl	74_37	+1	known	nonsense	c.1027	p.R343*	0.013	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	-	no_errors	TRIB3	HGNC	ENSG00000101255	tier1	-	-	59	0	0.00	18	10	35.71
TRIM66	0	genome.wustl.edu	37	11	8665968	8665968	+	RNA	SNP	T	T	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	11	8665968	8665968	T	G	SNP	TRIM66	ENST00000531498	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.875	-	-	-	no_errors	TRIM66	HGNC	ENSG00000166436	tier1	-	-	18	0	0.00	27	13	32.50
TRIO	0	genome.wustl.edu	37	5	14358418	14358418	+	Silent	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	5	14358418	14358418	C	T	SNP	TRIO	ENST00000344204	human	ensembl	74_37	+1	known	silent	c.2178	p.N726	1.000	smart_Spectrin/alpha-actinin	pfam_DH-domain,pfam_Prot_kinase_dom,pfam_Spectrin_repeat,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,superfamily_Capsid/spike_ssDNA_virus,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRAL-TRIO_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	TRIO	HGNC	ENSG00000038382	tier1	-	-	60	0	0.00	26	11	29.73
TRPM6	0	genome.wustl.edu	37	9	77397639	77397639	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	9	77397639	77397639	G	T	SNP	TRPM6	ENST00000451710	human	ensembl	74_37	-1	known	missense	c.3050	p.P1017Q	1.000	pfam_Ion_trans_dom	pfam_MHCK_EF2_kinase,pfam_Ion_trans_dom,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase	-	no_errors	TRPM6	HGNC	ENSG00000119121				23	0	0.00	40	4	9.09
TRUB1	0	genome.wustl.edu	37	10	116735069	116735069	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	10	116735069	116735069	G	T	SNP	TRUB1	ENST00000298746	human	ensembl	74_37	+1	known	missense	c.981	p.Q327H	0.046	superfamily_PsdUridine_synth_cat_dom	pfam_PsdUridine_synth,superfamily_PsdUridine_synth_cat_dom,tigrfam_tRNA_psdUridine_synth_TruB	-	no_errors	TRUB1	HGNC	ENSG00000165832				19	0	0.00	42	3	6.67
TSHZ3	0	genome.wustl.edu	37	19	31770039	31770039	+	Silent	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	19	31770039	31770039	G	A	SNP	TSHZ3	ENST00000240587	human	ensembl	74_37	-1	known	silent	c.660	p.S220	0.997	smart_Znf_C2H2-like	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	TSHZ3	HGNC	ENSG00000121297	tier1	-	-	84	0	0.00	31	14	31.11
TSLP	0	genome.wustl.edu	37	5	110411672	110411672	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	5	110411672	110411672	G	T	SNP	TSLP	ENST00000344895	human	ensembl	74_37	+1	known	missense	c.380	p.R127M	0.000	NULL	NULL	-	no_errors	TSLP	HGNC	ENSG00000145777	tier1	-	-	28	0	0.00	18	19	51.35
TSSC2	0	genome.wustl.edu	37	11	3423919	3423919	+	RNA	SNP	C	C	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	11	3423919	3423919	C	G	SNP	TSSC2	ENST00000529482	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	TSSC2	HGNC	ENSG00000223756	tier1	-	-	147	0	0.00	47	29	38.16
TTLL13	0	genome.wustl.edu	37	15	90807287	90807287	+	Missense_Mutation	SNP	A	A	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	15	90807287	90807287	A	T	SNP	TTLL13	ENST00000438251	human	ensembl	74_37	+1	known	missense	c.2197	p.S733C	0.328	NULL	pfam_TTL/TTLL_fam	-	no_errors	TTLL13	HGNC	ENSG00000213471	tier1	-	-	54	0	0.00	35	21	37.50
TTLL13	0	genome.wustl.edu	37	15	90807288	90807288	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	15	90807288	90807288	G	C	SNP	TTLL13	ENST00000438251	human	ensembl	74_37	+1	known	missense	c.2198	p.S733T	0.843	NULL	pfam_TTL/TTLL_fam	-	no_errors	TTLL13	HGNC	ENSG00000213471	tier1	-	-	53	0	0.00	36	19	34.55
TTN	0	genome.wustl.edu	37	2	179540447	179540447	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	2	179540447	179540447	C	A	SNP	TTN	ENST00000589042	human	ensembl	74_37	-1	putative	missense	c.34488	p.K11496N	1.000	superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_PPAK_motif,pfam_Titin_Z,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,superfamily_ARM-type_fold,superfamily_P-loop_NTPase,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	25	0	0.00	19	12	38.71
TTN	0	genome.wustl.edu	37	2	179527477	179527478	+	Frame_Shift_Ins	INS	-	-	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	2	179527477	179527478	0	T	INS	TTN	ENST00000589042	human	ensembl	74_37	-1	putative	frame_shift_ins	c.36853_36852	p.P12284fs	0.016:0.007	pfam_PPAK_motif,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_PPAK_motif,pfam_Titin_Z,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,superfamily_ARM-type_fold,superfamily_P-loop_NTPase,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				24	0	0.00	16	5	23.81
TUBB	0	genome.wustl.edu	37	6	30690400	30690401	+	Frame_Shift_Del	DEL	TG	TG	-			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	6	30690400	30690401	TG	-	DEL	TUBB	ENST00000327892	human	ensembl	74_37	+1	known	frame_shift_del	c.144_145	p.Y50fs	0.999:1.000	pfam_Tubulin_FtsZ_GTPase,pfam_Misato_II_tubulin-like,superfamily_Tubulin_FtsZ_GTPase,smart_Tubulin_FtsZ_GTPase,prints_Beta_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,pfam_Misato_II_tubulin-like,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Gamma_tubulin,prints_Delta_tubulin,prints_Alpha_tubulin	-	no_errors	TUBB	HGNC	ENSG00000196230	tier1			106	0	0.00	44	29	39.73
TULP3	0	genome.wustl.edu	37	12	3000140	3000140	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	12	3000140	3000140	T	G	SNP	TULP3	ENST00000448120	human	ensembl	74_37	+1	known	missense	c.27	p.S9R	0.002	NULL	pfam_Tubby_C,superfamily_Tubby_C-like,prints_Tubby_C,prints_Tubby_N	-	no_errors	TULP3	HGNC	ENSG00000078246	tier1	-	-	142	0	0.00	33	10	23.26
TYR	0	genome.wustl.edu	37	11	88961100	88961100	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	11	88961100	88961100	C	A	SNP	TYR	ENST00000263321	human	ensembl	74_37	+1	known	missense	c.1146	p.N382K	0.882	pfam_Tyrosinase,superfamily_Unchr_di-copper_centre,prints_Tyrosinase	pfam_Tyrosinase,superfamily_Unchr_di-copper_centre,prints_Tyrosinase	-	no_errors	TYR	HGNC	ENSG00000077498	tier1	rs62645910	-	51	0	0.00	35	21	37.50
UBR3	0	genome.wustl.edu	37	2	170806482	170806482	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	2	170806482	170806482	G	A	SNP	UBR3	ENST00000272793	human	ensembl	74_37	+1	known	missense	c.3452	p.R1151H	1.000	NULL	pfam_Znf_N-recognin,smart_Znf_N-recognin_met,pfscan_Znf_N-recognin	-	no_errors	UBR3	HGNC	ENSG00000144357	tier1	-	-	36	0	0.00	30	11	26.83
UGT3A1	0	genome.wustl.edu	37	5	35954387	35954387	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	5	35954387	35954387	G	T	SNP	UGT3A1	ENST00000274278	human	ensembl	74_37	-1	known	missense	c.1489	p.L497M	0.041	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT3A1	HGNC	ENSG00000145626				83	0	0.00	46	4	8.00
UNC45B	0	genome.wustl.edu	37	17	33481676	33481676	+	Silent	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	17	33481676	33481676	G	A	SNP	UNC45B	ENST00000268876	human	ensembl	74_37	+1	known	silent	c.555	p.L185	1.000	superfamily_ARM-type_fold,smart_Armadillo	pfam_UNC-45/Ring3,superfamily_ARM-type_fold,smart_TPR_repeat,smart_Armadillo,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	UNC45B	HGNC	ENSG00000141161				69	0	0.00	29	2	6.45
USHBP1	0	genome.wustl.edu	37	19	17367447	17367447	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	19	17367447	17367447	G	T	SNP	USHBP1	ENST00000252597	human	ensembl	74_37	-1	known	missense	c.1303	p.R435S	0.701	NULL	pfam_USH1C-bd_PDZ_domain	-	no_errors	USHBP1	HGNC	ENSG00000130307				24	0	0.00	21	2	8.70
USP28	0	genome.wustl.edu	37	11	113700044	113700044	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	11	113700044	113700044	T	C	SNP	USP28	ENST00000003302	human	ensembl	74_37	-1	known	missense	c.934	p.T312A	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,superfamily_UBA-like,pfscan_Peptidase_C19/C67	-	no_errors	USP28	HGNC	ENSG00000048028	tier1	-	-	74	0	0.00	52	19	26.76
USP31	0	genome.wustl.edu	37	16	23091494	23091494	+	Splice_Site	SNP	T	T	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	16	23091494	23091494	T	G	SNP	USP31	ENST00000219689	human	ensembl	74_37	-1	known	splice_site	c.1951-2	e13-2	1.000	-	-	-	no_errors	USP31	HGNC	ENSG00000103404	tier1	-	-	21	0	0.00	24	12	33.33
UTP23	0	genome.wustl.edu	37	8	117778864	117778864	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	8	117778864	117778864	C	T	SNP	UTP23	ENST00000309822	human	ensembl	74_37	+1	known	missense	c.22	p.H8Y	1.000	NULL	pfam_Fcf1/Utp23	-	no_errors	UTP23	HGNC	ENSG00000147679	tier1	-	-	50	0	0.00	47	7	12.96
UTRN	0	genome.wustl.edu	37	6	145124230	145124230	+	Nonsense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	6	145124230	145124230	C	T	SNP	UTRN	ENST00000367545	human	ensembl	74_37	+1	known	nonsense	c.9304	p.R3102*	1.000	pfam_Znf_ZZ,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_Znf_ZZ	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	UTRN	HGNC	ENSG00000152818	tier1	-	-	44	0	0.00	50	47	48.45
VCAN	0	genome.wustl.edu	37	5	82816578	82816578	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	5	82816578	82816578	C	A	SNP	VCAN	ENST00000265077	human	ensembl	74_37	+1	known	missense	c.2453	p.T818K	0.894	NULL	pfam_Link,pfam_C-type_lectin,pfam_Ig_V-set,pfam_EG-like_dom,pfam_Sushi_SCR_CCP,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_Ig_sub,smart_Link,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like_dom,prints_Link	-	no_errors	VCAN	HGNC	ENSG00000038427	tier1	-	-	31	0	0.00	27	11	28.95
VWF	0	genome.wustl.edu	37	12	6132813	6132813	+	Silent	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	12	6132813	6132813	C	T	SNP	VWF	ENST00000261405	human	ensembl	74_37	-1	known	silent	c.3363	p.R1121	1.000	pirsf_VWF,pfam_Unchr_dom_Cys-rich,smart_Unchr_dom_Cys-rich	pirsf_VWF,pfam_VWF_type-D,pfam_VWF_A,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_VWF_A,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_A,pfscan_VWF_C	-	no_errors	VWF	HGNC	ENSG00000110799	tier1	-	-	235	0	0.00	112	57	33.73
WDFY4	0	genome.wustl.edu	37	10	49935564	49935564	+	Silent	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	10	49935564	49935564	C	T	SNP	WDFY4	ENST00000325239	human	ensembl	74_37	+1	known	silent	c.831	p.D277	0.967	superfamily_ARM-type_fold	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDFY4	HGNC	ENSG00000128815	tier1	-	-	57	0	0.00	39	17	30.36
WDR90	0	genome.wustl.edu	37	16	708985	708985	+	Silent	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	16	708985	708985	C	A	SNP	WDR90	ENST00000549091	human	ensembl	74_37	+1	novel	silent	c.2985	p.L995	0.969	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,pfam_DUF667,pfam_Nucleoporin_Nup160,superfamily_Quinonprotein_ADH-like_supfam,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR90	HGNC	ENSG00000161996	tier1	-	-	92	0	0.00	33	29	46.77
WIPF1	0	genome.wustl.edu	37	2	175436784	175436784	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	2	175436784	175436784	G	A	SNP	WIPF1	ENST00000272746	human	ensembl	74_37	-1	known	missense	c.749	p.P250L	0.998	NULL	smart_WH2_dom,pfscan_WH2_dom	-	no_errors	WIPF1	HGNC	ENSG00000115935	tier1	-	-	92	0	0.00	30	11	26.83
ZC3H12B	0	genome.wustl.edu	37	X	64709147	64709147	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	X	64709147	64709147	G	T	SNP	ZC3H12B	ENST00000338957	human	ensembl	74_37	+1	known	missense	c.466	p.G156W	0.703	NULL	pfam_RNase_Zc3h12	-	no_errors	ZC3H12B	HGNC	ENSG00000102053				23	0	0.00	28	4	12.12
ZFP42	0	genome.wustl.edu	37	4	188924336	188924336	+	Silent	SNP	A	A	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	4	188924336	188924336	A	G	SNP	ZFP42	ENST00000326866	human	ensembl	74_37	+1	known	silent	c.375	p.K125	0.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFP42	HGNC	ENSG00000179059				30	0	0.00	38	2	5.00
ZNF174	0	genome.wustl.edu	37	16	3454446	3454446	+	Silent	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	16	3454446	3454446	G	T	SNP	ZNF174	ENST00000268655	human	ensembl	74_37	+1	known	silent	c.423	p.G141	1.000	smart_Tscrpt_reg_SCAN	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF174	HGNC	ENSG00000103343				67	0	0.00	54	3	5.26
ZNF180	0	genome.wustl.edu	37	19	44980661	44980661	+	Silent	SNP	A	A	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	19	44980661	44980661	A	G	SNP	ZNF180	ENST00000221327	human	ensembl	74_37	-1	known	silent	c.2037	p.H679	0.994	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF180	HGNC	ENSG00000167384	tier1	-	-	27	0	0.00	36	16	30.77
ZNF200	0	genome.wustl.edu	37	16	3283719	3283719	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	16	3283719	3283719	G	T	SNP	ZNF200	ENST00000414144	human	ensembl	74_37	-1	known	missense	c.37	p.P13T	0.996	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF200	HGNC	ENSG00000010539	tier1	-	-	89	0	0.00	65	4	5.71
ZNF251	0	genome.wustl.edu	37	8	145947949	145947949	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	8	145947949	145947949	G	C	SNP	ZNF251	ENST00000292562	human	ensembl	74_37	-1	known	missense	c.1096	p.Q366E	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF251	HGNC	ENSG00000198169	tier1	-	-	28	0	0.00	82	12	12.63
ZNF280D	0	genome.wustl.edu	37	15	56946703	56946704	+	Splice_Site	INS	-	-	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	15	56946703	56946704	-	A	INS	ZNF280D	ENST00000267807	human	ensembl	74_37	-1	known	splice_site_ins	c.2058-3_2058-2	e16-2	1.000:0.001	-	-	-	no_errors	ZNF280D	HGNC	ENSG00000137871	tier1			38	0	0.00	58	22	27.50
ZNF32	0	genome.wustl.edu	37	10	44139887	44139887	+	Silent	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	10	44139887	44139887	G	T	SNP	ZNF32	ENST00000374433	human	ensembl	74_37	-1	known	silent	c.433	p.R145	0.147	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF32	HGNC	ENSG00000169740				25	0	0.00	37	2	5.13
ZNF320	0	genome.wustl.edu	37	19	53385108	53385108	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	19	53385108	53385108	C	T	SNP	ZNF320	ENST00000391781	human	ensembl	74_37	-1	known	missense	c.271	p.E91K	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF320	HGNC	ENSG00000182986	tier1	-	-	56	0	0.00	76	32	29.36
ZNF461	0	genome.wustl.edu	37	19	37128585	37128586	+	RNA	DEL	AA	AA	-			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	19	37128585	37128586	AA	-	DEL	ZNF461	ENST00000589442	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.035:0.037	-	-	-	no_errors	ZNF461	HGNC	ENSG00000197808	tier1			29	0	0.00	43	12	21.82
ZNF534	0	genome.wustl.edu	37	19	52954490	52954490	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	19	52954490	52954490	C	T	SNP	ZNF534	ENST00000301085	human	ensembl	74_37	+1	putative	missense	c.322	p.R108C	0.005	NULL	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	-	no_errors	ZNF534	HGNC	ENSG00000198633	tier1	-	-	129	0	0.00	40	32	44.44
ZNF644	0	genome.wustl.edu	37	1	91405831	91405831	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	1	91405831	91405831	G	T	SNP	ZNF644	ENST00000337393	human	ensembl	74_37	-1	known	missense	c.1080	p.F360L	0.985	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF644	HGNC	ENSG00000122482	tier1	-	-	31	0	0.00	56	4	6.67
ZNF714	0	genome.wustl.edu	37	19	21300459	21300460	+	Frame_Shift_Del	DEL	AT	AT	-			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	AT	AT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	19	21300459	21300460	AT	0	DEL	ZNF714	ENST00000596143	human	ensembl	74_37	+1	known	frame_shift_del	c.989_990	p.H330fs	0.995:0.991	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF714	HGNC	ENSG00000160352				25	0	0.00	31	8	20.51
ZNF775	0	genome.wustl.edu	37	7	150093755	150093755	+	Silent	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	7	150093755	150093755	C	T	SNP	ZNF775	ENST00000329630	human	ensembl	74_37	+1	known	silent	c.186	p.A62	0.002	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF775	HGNC	ENSG00000196456				27	0	0.00	10	3	23.08
ZNF790-AS1	0	genome.wustl.edu	37	19	37314712	37314712	+	RNA	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	19	37314712	37314712	C	A	SNP	ZNF790-AS1	ENST00000588906	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	CTD-2162K18.5	Clone_based_vega_gene	ENSG00000267254	tier1	-	-	35	0	0.00	53	4	7.02
ZNF804A	0	genome.wustl.edu	37	2	185801665	185801665	+	Silent	SNP	A	A	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	2	185801665	185801665	A	G	SNP	ZNF804A	ENST00000302277	human	ensembl	74_37	+1	known	silent	c.1542	p.G514	0.001	NULL	pfam_Znf_C2H2_jaz	-	no_errors	ZNF804A	HGNC	ENSG00000170396				33	0	0.00	55	3	5.17
ZSWIM5	0	genome.wustl.edu	37	1	45484252	45484252	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	1	45484252	45484252	C	A	SNP	ZSWIM5	ENST00000359600	human	ensembl	74_37	-1	known	missense	c.3432	p.K1144N	1.000	NULL	pfscan_Znf_SWIM	-	no_errors	ZSWIM5	HGNC	ENSG00000162415	tier1	-	-	85	0	0.00	44	19	30.16
ZUFSP	0	genome.wustl.edu	37	6	116987880	116987880	+	Missense_Mutation	SNP	C	C	G			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	6	116987880	116987880	C	G	SNP	ZUFSP	ENST00000368576	human	ensembl	74_37	-1	known	missense	c.476	p.C159S	1.000	smart_Znf_C2H2-like	pfam_Peptidase_C78_UfSP1/2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZUFSP	HGNC	ENSG00000153975	tier1	-	-	39	0	0.00	49	22	30.99
ZYG11B	0	genome.wustl.edu	37	1	53222263	53222263	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FG-01A-11D-A33E-09	TCGA-JY-A6FG-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c8cfef47-b2bf-4243-ba74-b5450dd7b169	56632598-9ac5-4421-9af1-e982f8aeeabc	1	53222263	53222263	C	T	SNP	ZYG11B	ENST00000294353	human	ensembl	74_37	+1	known	missense	c.164	p.A55V	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	ZYG11B	HGNC	ENSG00000162378				28	0	0.00	35	4	10.26
