Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
AACS	0	genome.wustl.edu	37	12	125613984	125613984	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	12	125613984	125613984	G	C	SNP	AACS	ENST00000316519	human	ensembl	74_37	+1	known	missense	c.1527	p.K509N	1.000	pfam_AMP-dep_Synth/Lig,tigrfam_Acac_CoA_synth	pfam_AMP-dep_Synth/Lig,tigrfam_Acac_CoA_synth	-	no_errors	AACS	HGNC	ENSG00000081760	tier1	-	-	121	0	0.00	18	66	78.57
ABCA10	0	genome.wustl.edu	37	17	67218024	67218024	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	17	67218024	67218024	G	A	SNP	ABCA10	ENST00000269081	human	ensembl	74_37	-1	known	missense	c.212	p.A71V	0.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA10	HGNC	ENSG00000154263	tier1	-	-	23	0	0.00	40	29	42.03
ABCA13	0	genome.wustl.edu	37	7	48278946	48278946	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	7	48278946	48278946	T	G	SNP	ABCA13	ENST00000435803	human	ensembl	74_37	+1	known	missense	c.1006	p.S336A	1.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA13	HGNC	ENSG00000179869	tier1	-	-	39	0	0.00	36	30	45.45
ABCA7	0	genome.wustl.edu	37	19	1061782	1061782	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	19	1061782	1061782	G	T	SNP	ABCA7	ENST00000263094	human	ensembl	74_37	+1	known	missense	c.5465	p.C1822F	1.000	superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_GroES-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA7	HGNC	ENSG00000064687	tier1	-	-	95	0	0.00	66	4	5.71
ABCB5	0	genome.wustl.edu	37	7	20766683	20766683	+	Silent	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	7	20766683	20766683	G	A	SNP	ABCB5	ENST00000258738	human	ensembl	74_37	+1	known	silent	c.1311	p.E437	1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,pfam_ABC_ATPase_put,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB5	HGNC	ENSG00000004846	tier1	-	-	23	0	0.00	71	18	20.22
ABL1	0	genome.wustl.edu	37	9	133760107	133760107	+	Silent	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	9	133760107	133760107	G	A	SNP	ABL1	ENST00000372348	human	ensembl	74_37	+1	known	silent	c.2487	p.P829	0.011	NULL	pfam_F-actin_binding,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_F-actin_binding,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	ABL1	HGNC	ENSG00000097007	tier1	-	-	30	0	0.00	19	15	44.12
ACIN1	0	genome.wustl.edu	37	14	23548783	23548783	+	Silent	SNP	A	A	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	14	23548783	23548783	A	T	SNP	ACIN1	ENST00000262710	human	ensembl	74_37	-1	known	silent	c.1935	p.S645	0.508	NULL	pfam_SAP_dom,smart_SAP_dom,pfscan_SAP_dom	-	no_errors	ACIN1	HGNC	ENSG00000100813				30	0	0.00	55	8	12.70
ACIN1	0	genome.wustl.edu	37	14	23549875	23549875	+	Missense_Mutation	SNP	T	T	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	14	23549875	23549875	T	A	SNP	ACIN1	ENST00000262710	human	ensembl	74_37	-1	known	missense	c.843	p.E281D	0.224	NULL	pfam_SAP_dom,smart_SAP_dom,pfscan_SAP_dom	-	no_errors	ACIN1	HGNC	ENSG00000100813				19	0	0.00	36	6	14.29
ACTR3C	0	genome.wustl.edu	37	7	149990455	149990455	+	Silent	SNP	T	T	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	7	149990455	149990455	T	C	SNP	ACTR3C	ENST00000252071	human	ensembl	74_37	-1	known	silent	c.99	p.T33	0.988	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related	-	no_errors	ACTR3C	HGNC	ENSG00000106526				68	0	0.00	53	4	7.02
ADAD2	0	genome.wustl.edu	37	16	84228731	84228731	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	16	84228731	84228731	C	T	SNP	ADAD2	ENST00000268624	human	ensembl	74_37	+1	known	missense	c.880	p.L294F	0.982	smart_A_deamin	pfam_A_deamin,pfam_dsRNA-bd_dom,smart_A_deamin,pfscan_dsRNA-bd_dom,pfscan_A_deamin	-	no_errors	ADAD2	HGNC	ENSG00000140955	tier1	-	-	103	0	0.00	59	4	6.35
ADAM19	0	genome.wustl.edu	37	5	156924017	156924017	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	5	156924017	156924017	G	T	SNP	ADAM19	ENST00000394020	human	ensembl	74_37	-1	known	missense	c.1485	p.H495Q	0.897	pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,pfscan_Blood-coag_inhib_Disintegrin,prints_Blood-coag_inhib_Disintegrin	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM19	HGNC	ENSG00000135074	tier1	-	-	60	0	0.00	61	4	6.15
ADCK3	0	genome.wustl.edu	37	1	227171737	227171737	+	RNA	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	227171737	227171737	G	T	SNP	ADCK3	ENST00000478406	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ADCK3	HGNC	ENSG00000163050	tier1	rs1574184	-	45	0	0.00	32	22	40.74
ADCY3	0	genome.wustl.edu	37	2	25141535	25141535	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	2	25141535	25141535	G	T	SNP	ADCY3	ENST00000260600	human	ensembl	74_37	-1	known	missense	c.322	p.L108I	0.007	NULL	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY3	HGNC	ENSG00000138031	tier1	-	-	83	0	0.00	73	4	5.19
ADCY8	0	genome.wustl.edu	37	8	131922079	131922079	+	Silent	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	8	131922079	131922079	G	A	SNP	ADCY8	ENST00000286355	human	ensembl	74_37	-1	known	silent	c.1515	p.D505	1.000	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY8	HGNC	ENSG00000155897	tier1	-	-	50	0	0.00	42	28	40.00
ADD2	0	genome.wustl.edu	37	2	70890714	70890714	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	2	70890714	70890714	G	A	SNP	ADD2	ENST00000264436	human	ensembl	74_37	-1	known	missense	c.2024	p.T675M	0.997	NULL	pfam_Aldolase_II/adducin_N,superfamily_Aldolase_II/adducin_N	-	no_errors	ADD2	HGNC	ENSG00000075340	tier1	-	-	38	0	0.00	35	38	52.05
AKAP6	0	genome.wustl.edu	37	14	33293331	33293331	+	Silent	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	14	33293331	33293331	G	A	SNP	AKAP6	ENST00000280979	human	ensembl	74_37	+1	known	silent	c.6312	p.L2104	0.988	NULL	smart_Spectrin/alpha-actinin	-	no_errors	AKAP6	HGNC	ENSG00000151320	tier1	-	-	25	0	0.00	25	7	21.88
AKR7A2	0	genome.wustl.edu	37	1	19633579	19633579	+	Silent	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	19633579	19633579	G	T	SNP	AKR7A2	ENST00000235835	human	ensembl	74_37	-1	known	silent	c.705	p.G235	1.000	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom	-	no_errors	AKR7A2	HGNC	ENSG00000053371				83	0	0.00	72	4	5.26
ALPK2	0	genome.wustl.edu	37	18	56184191	56184191	+	Silent	SNP	C	C	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	18	56184191	56184191	C	A	SNP	ALPK2	ENST00000361673	human	ensembl	74_37	-1	known	silent	c.5889	p.G1963	1.000	pfam_MHCK_EF2_kinase,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase	pfam_MHCK_EF2_kinase,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase,pfscan_Ig-like_dom	-	no_errors	ALPK2	HGNC	ENSG00000198796				57	0	0.00	71	4	5.33
AMACR	0	genome.wustl.edu	37	5	33988375	33988375	+	RNA	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	5	33988375	33988375	G	T	SNP	AMACR	ENST00000514195	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.223	-	-	-	no_errors	AMACR	HGNC	ENSG00000242110				29	0	0.00	94	5	5.05
AMPH	0	genome.wustl.edu	37	7	38468129	38468129	+	RNA	SNP	T	T	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	7	38468129	38468129	T	A	SNP	AMPH	ENST00000471913	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.020	-	-	-	no_errors	AMPH	HGNC	ENSG00000078053	tier1	-	-	27	0	0.00	67	20	22.99
ANKS1A	0	genome.wustl.edu	37	6	34949729	34949729	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	6	34949729	34949729	T	C	SNP	ANKS1A	ENST00000360359	human	ensembl	74_37	+1	known	missense	c.698	p.V233A	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_PTB/PI_dom,pfam_SAM_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SAM,smart_PTB/PI_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PTB/PI_dom,pfscan_SAM,prints_Ankyrin_rpt	-	no_errors	ANKS1A	HGNC	ENSG00000064999				36	0	0.00	60	4	6.25
AOAH	0	genome.wustl.edu	37	7	36552785	36552785	+	Nonsense_Mutation	SNP	A	A	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	7	36552785	36552785	A	T	SNP	AOAH	ENST00000431169	human	ensembl	74_37	-1	putative	nonsense	c.1920	p.Y640*	0.000	NULL	pfam_Lipase_GDSL,pfam_SapB_2,superfamily_Saposin-like,smart_SaposinB,pfscan_SaposinB	-	no_errors	AOAH	HGNC	ENSG00000136250	tier1	-	-	47	0	0.00	27	67	71.28
AOC4P	0	genome.wustl.edu	37	17	41025454	41025454	+	RNA	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	17	41025454	41025454	G	T	SNP	AOC4P	ENST00000563852	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	AOC4P	HGNC	ENSG00000260105	tier1	-	-	27	0	0.00	48	4	7.69
AP4E1	0	genome.wustl.edu	37	15	51285652	51285652	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	15	51285652	51285652	G	T	SNP	AP4E1	ENST00000261842	human	ensembl	74_37	+1	known	nonsense	c.2176	p.E726*	0.026	pirsf_AP4_complex_esu	pfam_Clathrin/coatomer_adapt-like_N,pfam_Coatomer_bsu_C,superfamily_ARM-type_fold,pirsf_AP4_complex_esu	-	no_errors	AP4E1	HGNC	ENSG00000081014				23	0	0.00	63	4	5.97
APC	0	genome.wustl.edu	37	5	112151228	112151229	+	Frame_Shift_Ins	INS	-	-	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	5	112151228	112151229	-	T	INS	APC	ENST00000257430	human	ensembl	74_37	+1	known	frame_shift_ins	c.871_872	p.L292fs	1.000:1.000	NULL	pfam_APC_basic_dom,pfam_EB1-bd,pfam_APC_Cys-rich_rpt,pfam_Armadillo,pfam_APC_dom,pfam_SAMP,pfam_APC_15aa_rpt,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	APC	HGNC	ENSG00000134982	tier1			50	0	0.00	25	29	53.70
ARAP2	0	genome.wustl.edu	37	4	36179500	36179500	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	4	36179500	36179500	T	G	SNP	ARAP2	ENST00000303965	human	ensembl	74_37	-1	known	missense	c.1806	p.K602N	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,pfam_ArfGAP,pfam_SAM_type1,pfam_SAM_2,pfam_Ras-assoc,superfamily_Rho_GTPase_activation_prot,superfamily_SAM/pointed,smart_SAM,smart_Pleckstrin_homology,smart_ArfGAP,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SAM,pfscan_ArfGAP,pfscan_RhoGAP_dom,prints_ArfGAP	-	no_errors	ARAP2	HGNC	ENSG00000047365	tier1	-	-	12	0	0.00	20	9	31.03
ARHGAP10	0	genome.wustl.edu	37	4	148968114	148968114	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	4	148968114	148968114	G	T	SNP	ARHGAP10	ENST00000336498	human	ensembl	74_37	+1	known	missense	c.1939	p.V647L	0.654	NULL	pfam_RhoGAP_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_RhoGAP_dom,smart_SH3_domain,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	ARHGAP10	HGNC	ENSG00000071205				44	0	0.00	42	3	6.67
ARHGAP31	0	genome.wustl.edu	37	3	119132712	119132712	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	3	119132712	119132712	G	A	SNP	ARHGAP31	ENST00000264245	human	ensembl	74_37	+1	known	missense	c.1936	p.D646N	0.999	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP31	HGNC	ENSG00000031081	tier1	-	-	30	0	0.00	38	27	41.54
ARHGEF10	0	genome.wustl.edu	37	8	1846630	1846630	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	8	1846630	1846630	C	T	SNP	ARHGEF10	ENST00000398564	human	ensembl	74_37	+1	known	missense	c.1664	p.T555M	0.991	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,superfamily_DH-domain,superfamily_WD40_repeat_dom,smart_DH-domain,pfscan_DH-domain	-	no_errors	ARHGEF10	HGNC	ENSG00000104728	tier1	-	-	90	0	0.00	9	39	81.25
ARHGEF4	0	genome.wustl.edu	37	2	131798851	131798851	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	2	131798851	131798851	G	T	SNP	ARHGEF4	ENST00000326016	human	ensembl	74_37	+1	known	missense	c.1153	p.A385S	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_SH3_domain,pfam_SH3_2,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_SH3_domain,smart_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	ARHGEF4	HGNC	ENSG00000136002				38	0	0.00	27	2	6.90
ARID1A	0	genome.wustl.edu	37	1	27099397	27099397	+	Nonsense_Mutation	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	27099397	27099397	C	T	SNP	ARID1A	ENST00000324856	human	ensembl	74_37	+1	known	nonsense	c.3634	p.Q1212*	1.000	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1A	HGNC	ENSG00000117713				21	0	0.00	25	2	7.41
ARSA	0	genome.wustl.edu	37	22	51065261	51065261	+	Splice_Site	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	22	51065261	51065261	C	T	SNP	ARSA	ENST00000216124	human	ensembl	74_37	-1	known	splice_site	c.684+1	e3+1	1.000	-	-	-	no_errors	ARSA	HGNC	ENSG00000100299	tier1	rs146371968	-	40	0	0.00	4	22	84.62
ARSD	0	genome.wustl.edu	37	X	2838661	2838661	+	Silent	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	X	2838661	2838661	G	T	SNP	ARSD	ENST00000381154	human	ensembl	74_37	-1	known	silent	c.420	p.G140	0.964	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	-	no_errors	ARSD	HGNC	ENSG00000006756				16	0	0.00	41	4	8.89
ATF7	0	genome.wustl.edu	37	12	53926321	53926321	+	Silent	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	12	53926321	53926321	G	T	SNP	ATF7	ENST00000328463	human	ensembl	74_37	-1	known	silent	c.780	p.G260	1.000	pirsf_TF_cAMP-dep	pfam_bZIP,smart_Znf_C2H2-like,smart_bZIP,pirsf_TF_cAMP-dep,pfscan_Znf_C2H2,pfscan_bZIP	-	no_errors	ATF7	HGNC	ENSG00000170653				62	0	0.00	56	4	6.67
ATG13	0	genome.wustl.edu	37	11	46690365	46690365	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	11	46690365	46690365	G	T	SNP	ATG13	ENST00000312040	human	ensembl	74_37	+1	known	nonsense	c.1252	p.E418*	0.025	NULL	pfam_Autophagy-rel_p13	-	no_errors	ATG13	HGNC	ENSG00000175224				43	0	0.00	66	4	5.71
ATP10A	0	genome.wustl.edu	37	15	25953235	25953235	+	Missense_Mutation	SNP	T	T	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	15	25953235	25953235	T	A	SNP	ATP10A	ENST00000356865	human	ensembl	74_37	-1	known	missense	c.2463	p.E821D	0.300	superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10A	HGNC	ENSG00000206190	tier1	-	-	23	0	0.00	10	14	58.33
ATP11C	0	genome.wustl.edu	37	X	138865369	138865369	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	X	138865369	138865369	T	C	SNP	ATP11C	ENST00000327569	human	ensembl	74_37	-1	known	missense	c.1733	p.N578S	0.233	pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP11C	HGNC	ENSG00000101974	tier1	-	-	29	0	0.00	6	33	84.62
ATP2B1	0	genome.wustl.edu	37	12	90015477	90015477	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	12	90015477	90015477	G	A	SNP	ATP2B1	ENST00000261173	human	ensembl	74_37	-1	known	missense	c.1436	p.T479I	1.000	pfam_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_plasma,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATP_Ca_trans_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_plasma,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2B1	HGNC	ENSG00000070961	tier1	-	-	17	0	0.00	8	17	65.38
ATP8B5P	0	genome.wustl.edu	37	9	35450410	35450411	+	RNA	INS	-	-	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	9	35450410	35450411	0	T	INS	ATP8B5P	ENST00000430846	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.876:0.812	-	-	-	no_errors	ATP8B5P	HGNC	ENSG00000179766				58	0	0.00	103	9	8.04
ATRX	0	genome.wustl.edu	37	X	76763679	76763680	+	RNA	INS	-	-	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	X	76763679	76763680	-	A	INS	ATRX	ENST00000480283	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.018:0.003	-	-	-	no_errors	ATRX	HGNC	ENSG00000085224	tier1			13	0	0.00	35	7	16.67
BMP4	0	genome.wustl.edu	37	14	54423342	54423342	+	RNA	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	14	54423342	54423342	G	A	SNP	BMP4	ENST00000558489	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.997	-	-	-	no_errors	BMP4	HGNC	ENSG00000125378	tier1	-	-	89	0	0.00	62	4	6.06
BNC2	0	genome.wustl.edu	37	9	16436858	16436858	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	9	16436858	16436858	G	T	SNP	BNC2	ENST00000380672	human	ensembl	74_37	-1	known	missense	c.1334	p.A445E	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	BNC2	HGNC	ENSG00000173068				23	0	0.00	51	3	5.56
BOC	0	genome.wustl.edu	37	3	112996962	112996962	+	Silent	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	3	112996962	112996962	C	T	SNP	BOC	ENST00000273395	human	ensembl	74_37	+1	known	silent	c.1563	p.D521	0.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	BOC	HGNC	ENSG00000144857	tier1	-	-	45	0	0.00	27	14	34.15
C16orf82	0	genome.wustl.edu	37	16	27080038	27080038	+	RNA	DEL	T	T	-			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	16	27080038	27080038	T	-	DEL	C16orf82	ENST00000418886	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	C16orf82	HGNC	ENSG00000234186	tier1			27	0	0.00	23	4	14.81
C1orf173	0	genome.wustl.edu	37	1	75038176	75038176	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	75038176	75038176	G	T	SNP	C1orf173	ENST00000326665	human	ensembl	74_37	-1	known	missense	c.3218	p.T1073N	0.038	NULL	NULL	-	no_errors	C1orf173	HGNC	ENSG00000178965	tier1	-	-	33	0	0.00	62	4	6.06
CA4	0	genome.wustl.edu	37	17	58234883	58234883	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	17	58234883	58234883	C	T	SNP	CA4	ENST00000300900	human	ensembl	74_37	+1	known	missense	c.364	p.P122S	0.000	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	-	no_errors	CA4	HGNC	ENSG00000167434	tier1	-	-	36	0	0.00	50	4	7.41
CADPS	0	genome.wustl.edu	37	3	62388814	62388814	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	3	62388814	62388814	T	C	SNP	CADPS	ENST00000383710	human	ensembl	74_37	-1	known	missense	c.3824	p.D1275G	1.000	NULL	pfam_Ca-dep_secretion_activator,superfamily_C2_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	CADPS	HGNC	ENSG00000163618	tier1	-	-	44	0	0.00	86	6	6.52
CADPS	0	genome.wustl.edu	37	3	62570860	62570860	+	Missense_Mutation	SNP	C	C	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	3	62570860	62570860	C	G	SNP	CADPS	ENST00000383710	human	ensembl	74_37	-1	known	missense	c.1577	p.G526A	1.000	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Ca-dep_secretion_activator,superfamily_C2_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	CADPS	HGNC	ENSG00000163618	tier1	-	-	43	0	0.00	55	25	31.25
CAPRIN2	0	genome.wustl.edu	37	12	30876222	30876222	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	12	30876222	30876222	G	T	SNP	CAPRIN2	ENST00000251071	human	ensembl	74_37	-1	known	missense	c.2014	p.Q672K	0.999	pfam_Caprin-1_C	pfam_Caprin-1_C,pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	CAPRIN2	HGNC	ENSG00000110888	tier1	rs79465544	-	49	0	0.00	58	4	6.45
CCDC144A	0	genome.wustl.edu	37	17	16593966	16593966	+	Silent	SNP	C	C	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	17	16593966	16593966	C	A	SNP	CCDC144A	ENST00000360524	human	ensembl	74_37	+1	known	silent	c.252	p.L84	0.016	NULL	pfam_DUF3496	-	no_errors	CCDC144A	HGNC	ENSG00000170160	tier1	-	-	88	0	0.00	9	40	81.63
CD1D	0	genome.wustl.edu	37	1	158152065	158152065	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	158152065	158152065	T	G	SNP	CD1D	ENST00000368171	human	ensembl	74_37	+1	known	missense	c.572	p.L191R	0.007	superfamily_MHC_I/II-like_Ag-recog,pfscan_Ig-like_dom	pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	CD1D	HGNC	ENSG00000158473	tier1	-	-	62	0	0.00	36	27	42.86
CD5L	0	genome.wustl.edu	37	1	157804258	157804258	+	Silent	SNP	A	A	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	157804258	157804258	A	C	SNP	CD5L	ENST00000368174	human	ensembl	74_37	-1	known	silent	c.657	p.P219	0.000	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_SRCR	-	no_errors	CD5L	HGNC	ENSG00000073754	tier1	-	-	14	0	0.00	18	8	30.77
CDC27	0	genome.wustl.edu	37	17	45214617	45214617	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	17	45214617	45214617	G	T	SNP	CDC27	ENST00000531206	human	ensembl	74_37	-1	known	missense	c.1832	p.T611N	1.000	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	CDC27	HGNC	ENSG00000004897	tier1	-	-	37	0	0.00	87	7	7.45
CDH8	0	genome.wustl.edu	37	16	61689518	61689518	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	16	61689518	61689518	T	G	SNP	CDH8	ENST00000577390	human	ensembl	74_37	-1	known	missense	c.1762	p.S588R	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH8	HGNC	ENSG00000150394	tier1	-	-	39	0	0.00	29	8	21.62
CDHR1	0	genome.wustl.edu	37	10	85971434	85971434	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	10	85971434	85971434	G	T	SNP	CDHR1	ENST00000372117	human	ensembl	74_37	+1	known	nonsense	c.1516	p.E506*	0.812	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDHR1	HGNC	ENSG00000148600				50	0	0.00	73	4	5.19
CDK5RAP2	0	genome.wustl.edu	37	9	123223027	123223027	+	Splice_Site	DEL	T	T	-			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	9	123223027	123223027	T	-	DEL	CDK5RAP2	ENST00000480112	human	ensembl	74_37	-1	known	splice_site_del	c.2104-2	e19-2	0.979	-	-	-	no_errors	CDK5RAP2	HGNC	ENSG00000136861	tier1			19	0	0.00	44	5	10.20
CEACAM18	0	genome.wustl.edu	37	19	51986386	51986386	+	Silent	SNP	C	C	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	19	51986386	51986386	C	G	SNP	CEACAM18	ENST00000451626	human	ensembl	74_37	+1	known	silent	c.972	p.L324	0.000	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	CEACAM18	HGNC	ENSG00000213822	tier1	-	-	68	0	0.00	4	50	92.59
CER1	0	genome.wustl.edu	37	9	14722203	14722203	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	9	14722203	14722203	T	G	SNP	CER1	ENST00000380911	human	ensembl	74_37	-1	known	missense	c.468	p.E156D	1.000	pfam_DAN,pirsf_Cerberus	pfam_DAN,pfam_Cys_knot,smart_Cys_knot_C,pirsf_Cerberus,pfscan_Cys_knot_C	-	no_errors	CER1	HGNC	ENSG00000147869	tier1	-	-	45	0	0.00	36	24	40.00
CHRNB2	0	genome.wustl.edu	37	1	154542074	154542074	+	Silent	SNP	C	C	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	154542074	154542074	C	A	SNP	CHRNB2	ENST00000368476	human	ensembl	74_37	+1	known	silent	c.201	p.L67	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNB2	HGNC	ENSG00000160716	tier1	-	-	66	0	0.00	64	30	31.91
CHRNB4	0	genome.wustl.edu	37	15	78917609	78917609	+	Nonsense_Mutation	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	15	78917609	78917609	C	T	SNP	CHRNB4	ENST00000412074	human	ensembl	74_37	-1	putative	nonsense	c.384	p.W128*	1.000	NULL	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel	-	no_errors	CHRNB4	HGNC	ENSG00000117971	tier1	-	-	33	0	0.00	62	4	6.06
CLK2	0	genome.wustl.edu	37	1	155232982	155232982	+	RNA	SNP	G	G	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	155232982	155232982	G	C	SNP	CLK2	ENST00000476983	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	CLK2	HGNC	ENSG00000176444	tier1	-	-	38	0	0.00	35	28	44.44
CLUH	0	genome.wustl.edu	37	17	2598212	2598212	+	Frame_Shift_Del	DEL	G	G	-			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	17	2598212	2598212	G	-	DEL	CLUH	ENST00000435359	human	ensembl	74_37	-1	known	frame_shift_del	c.2674	p.Q892fs	1.000	NULL	superfamily_GSKIP_dom	-	no_errors	CLUH	HGNC	ENSG00000132361	tier1			66	0	0.00	49	3	5.77
CNTN3	0	genome.wustl.edu	37	3	74385746	74385746	+	Silent	SNP	A	A	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	3	74385746	74385746	A	C	SNP	CNTN3	ENST00000263665	human	ensembl	74_37	-1	known	silent	c.1428	p.T476	0.046	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN3	HGNC	ENSG00000113805	tier1	-	-	25	0	0.00	17	19	52.78
COL12A1	0	genome.wustl.edu	37	6	75804854	75804854	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	6	75804854	75804854	C	A	SNP	COL12A1	ENST00000322507	human	ensembl	74_37	-1	known	missense	c.8619	p.K2873N	1.000	pfam_Collagen	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799	tier1	-	-	36	0	0.00	6	32	84.21
COL4A5	0	genome.wustl.edu	37	X	107920802	107920802	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	X	107920802	107920802	G	T	SNP	COL4A5	ENST00000328300	human	ensembl	74_37	+1	known	missense	c.3881	p.G1294V	1.000	pfam_Collagen	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A5	HGNC	ENSG00000188153	tier1	-	-	28	0	0.00	44	4	8.33
COL5A1	0	genome.wustl.edu	37	9	137687132	137687132	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	9	137687132	137687132	C	T	SNP	COL5A1	ENST00000371817	human	ensembl	74_37	+1	known	missense	c.2770	p.R924W	0.985	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL5A1	HGNC	ENSG00000130635	tier1	-	-	73	0	0.00	29	38	55.88
COQ5	0	genome.wustl.edu	37	12	120966890	120966890	+	Silent	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	12	120966890	120966890	G	T	SNP	COQ5	ENST00000288532	human	ensembl	74_37	-1	known	silent	c.55	p.R19	0.001	NULL	pfam_UbiE/COQ5_MeTrFase,pfam_Methyltransf_11,pfam_Methyltransf_12,tigrfam_UbiE/COQ5_MeTrFase	-	no_errors	COQ5	HGNC	ENSG00000110871				35	0	0.00	62	4	5.97
CPNE8	0	genome.wustl.edu	37	12	39047739	39047739	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	12	39047739	39047739	G	T	SNP	CPNE8	ENST00000331366	human	ensembl	74_37	-1	known	nonsense	c.1640	p.S547*	0.001	NULL	pfam_Copine,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,smart_VWF_A,pfscan_C2_dom,pfscan_VWF_A	-	no_errors	CPNE8	HGNC	ENSG00000139117	tier1	-	-	32	0	0.00	30	4	11.76
CSMD2	0	genome.wustl.edu	37	1	34066493	34066493	+	Silent	SNP	T	T	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	34066493	34066493	T	C	SNP	CSMD2	ENST00000373381	human	ensembl	74_37	-1	known	silent	c.6828	p.T2276	0.001	superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD2	HGNC	ENSG00000121904				69	0	0.00	73	4	5.19
CSNK1A1L	0	genome.wustl.edu	37	13	37678392	37678392	+	Silent	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	13	37678392	37678392	C	T	SNP	CSNK1A1L	ENST00000379800	human	ensembl	74_37	-1	known	silent	c.1002	p.V334	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CSNK1A1L	HGNC	ENSG00000180138	tier1	-	-	29	0	0.00	78	6	7.14
CTIF	0	genome.wustl.edu	37	18	46287983	46287983	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	18	46287983	46287983	G	T	SNP	CTIF	ENST00000382998	human	ensembl	74_37	+1	known	missense	c.1300	p.A434S	1.000	pfam_MIF4G-like_typ-3,superfamily_ARM-type_fold,smart_MIF4G-like_typ-3	pfam_MIF4G-like_typ-3,superfamily_ARM-type_fold,smart_MIF4G-like_typ-3	-	no_errors	CTIF	HGNC	ENSG00000134030	tier1	-	-	48	0	0.00	33	4	10.81
CTTNBP2NL	0	genome.wustl.edu	37	1	112958898	112958899	+	RNA	INS	-	-	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	112958898	112958899	-	A	INS	CTTNBP2NL	ENST00000502356	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	CTTNBP2NL	HGNC	ENSG00000143079	tier1			23	0	0.00	36	5	12.20
CUBN	0	genome.wustl.edu	37	10	16932470	16932470	+	Silent	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	10	16932470	16932470	G	A	SNP	CUBN	ENST00000377833	human	ensembl	74_37	-1	known	silent	c.8655	p.N2885	0.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	CUBN	HGNC	ENSG00000107611	tier1	-	-	66	0	0.00	51	35	40.23
CUL4B	0	genome.wustl.edu	37	X	119694117	119694119	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	X	119694117	119694119	GAG	-	DEL	CUL4B	ENST00000404115	human	ensembl	74_37	-1	known	in_frame_del	c.431_429	p.S146in_frame_del	0.999:1.000:1.000	NULL	pfam_Cullin_N,pfam_Cullin_neddylation_domain,superfamily_Cullin_repeat-like_dom,superfamily_Cullin_homology,smart_Cullin_homology,smart_Cullin_neddylation_domain,pfscan_Cullin_homology	-	no_errors	CUL4B	HGNC	ENSG00000158290	tier1			21	0	0.00	28	5	15.15
CYP4F43P	0	genome.wustl.edu	37	2	131188838	131188838	+	RNA	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	2	131188838	131188838	C	T	SNP	CYP4F43P	ENST00000455215	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CYP4F43P	HGNC	ENSG00000239402	tier1	-	-	26	0	0.00	41	20	32.79
DEFB106B	0	genome.wustl.edu	37	8	7340204	7340204	+	Silent	SNP	A	A	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	8	7340204	7340204	A	G	SNP	DEFB106B	ENST00000335479	human	ensembl	74_37	-1	known	silent	c.120	p.N40	0.791	NULL	NULL	-	no_errors	DEFB106B	HGNC	ENSG00000187082	tier1	rs138253070	-	36	0	0.00	41	8	16.33
DNAH10	0	genome.wustl.edu	37	12	124403387	124403387	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	12	124403387	124403387	G	T	SNP	DNAH10	ENST00000409039	human	ensembl	74_37	+1	known	missense	c.11043	p.E3681D	0.001	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_PyrdxlP-dep_Trfase,smart_AAA+_ATPase	-	no_errors	DNAH10	HGNC	ENSG00000197653	tier1	-	-	45	0	0.00	11	27	71.05
DNM1P46	0	genome.wustl.edu	37	15	100330953	100330953	+	RNA	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	15	100330953	100330953	G	T	SNP	DNM1P46	ENST00000341853	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.011	-	-	-	no_errors	DNM1P46	HGNC	ENSG00000182397	tier1	-	-	26	0	0.00	34	4	10.53
DOCK1	0	genome.wustl.edu	37	10	129172366	129172366	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	10	129172366	129172366	G	A	SNP	DOCK1	ENST00000280333	human	ensembl	74_37	+1	known	missense	c.3500	p.G1167E	1.000	superfamily_ARM-type_fold	pfam_DOCK_C,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,superfamily_Cyt_c-like_dom,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK1	HGNC	ENSG00000150760	tier1	-	-	53	0	0.00	63	36	36.00
DRD3	0	genome.wustl.edu	37	3	113878649	113878649	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	3	113878649	113878649	C	T	SNP	DRD3	ENST00000383673	human	ensembl	74_37	-1	known	missense	c.336	p.M112I	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Dopamine_D3_rcpt,prints_GPCR_Rhodpsn,prints_Dopamine_rcpt	-	no_errors	DRD3	HGNC	ENSG00000151577	tier1	-	-	35	0	0.00	74	19	20.43
DROSHA	0	genome.wustl.edu	37	5	31508814	31508814	+	Missense_Mutation	SNP	C	C	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	5	31508814	31508814	C	G	SNP	DROSHA	ENST00000344624	human	ensembl	74_37	-1	known	missense	c.1501	p.V501L	1.000	NULL	pfam_RNase_III_dom,pfam_dsRNA-bd_dom,superfamily_RNase_III_dom,smart_RNase_III_dom,smart_dsRNA-bd_dom,pfscan_dsRNA-bd_dom,pfscan_RNase_III_dom	-	no_errors	DROSHA	HGNC	ENSG00000113360	tier1	-	-	70	0	0.00	126	30	19.11
DTX2	0	genome.wustl.edu	37	7	76131710	76131710	+	Silent	SNP	C	C	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	7	76131710	76131710	C	A	SNP	DTX2	ENST00000324432	human	ensembl	74_37	+1	known	silent	c.1326	p.L442	0.034	smart_Znf_RING,pfscan_Znf_RING	pfam_WWE-dom,smart_WWE-dom_subgr,smart_Znf_RING,pfscan_WWE-dom,pfscan_Znf_RING	-	no_errors	DTX2	HGNC	ENSG00000091073	tier1	-	-	112	0	0.00	72	4	5.26
DYNC1H1	0	genome.wustl.edu	37	14	102502930	102502930	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	14	102502930	102502930	G	T	SNP	DYNC1H1	ENST00000360184	human	ensembl	74_37	+1	known	missense	c.10859	p.R3620I	0.996	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_Thioredoxin-like_fold,superfamily_Glutathione-S-Trfase_C-like,smart_AAA+_ATPase	-	no_errors	DYNC1H1	HGNC	ENSG00000197102				49	0	0.00	57	3	5.00
DZANK1	0	genome.wustl.edu	37	20	18393405	18393405	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	20	18393405	18393405	G	T	SNP	DZANK1	ENST00000262547	human	ensembl	74_37	-1	known	missense	c.1317	p.F439L	1.000	NULL	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	DZANK1	HGNC	ENSG00000089091				68	0	0.00	75	4	5.06
ECEL1	0	genome.wustl.edu	37	2	233348784	233348784	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	2	233348784	233348784	G	T	SNP	ECEL1	ENST00000304546	human	ensembl	74_37	-1	known	missense	c.1334	p.A445D	1.000	pfam_Peptidase_M13_N	pfam_Peptidase_M13_N,pfam_Peptidase_M13_C,prints_Peptidase_M13_C	-	no_errors	ECEL1	HGNC	ENSG00000171551				83	0	0.00	93	5	5.10
EGFEM1P	0	genome.wustl.edu	37	3	168530404	168530404	+	RNA	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	3	168530404	168530404	G	T	SNP	EGFEM1P	ENST00000482245	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	EGFEM1P	HGNC	ENSG00000206120	tier1	-	-	11	0	0.00	9	11	55.00
EML1	0	genome.wustl.edu	37	14	100380522	100380522	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	14	100380522	100380522	G	T	SNP	EML1	ENST00000334192	human	ensembl	74_37	+1	known	nonsense	c.1558	p.E520*	1.000	superfamily_Quinonprotein_ADH-like_supfam,pfscan_WD40_repeat_dom	pfam_HELP,pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EML1	HGNC	ENSG00000066629	tier1	-	-	72	0	0.00	74	4	5.13
EMR3	0	genome.wustl.edu	37	19	14762000	14762000	+	Silent	SNP	C	C	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	19	14762000	14762000	C	A	SNP	EMR3	ENST00000253673	human	ensembl	74_37	-1	known	silent	c.594	p.A198	0.366	NULL	pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_EMR1_rcpt,prints_GPCR_2_secretin-like,prints_GPCR_2_CD97	-	no_errors	EMR3	HGNC	ENSG00000131355				22	0	0.00	38	4	9.52
ENDOU	0	genome.wustl.edu	37	12	48111404	48111404	+	Silent	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	12	48111404	48111404	G	T	SNP	ENDOU	ENST00000229003	human	ensembl	74_37	-1	known	silent	c.156	p.R52	1.000	pfam_Somatomedin_B_dom,smart_Somatomedin_B_dom,pfscan_Somatomedin_B_dom,prints_Somatomedin_B_chordata	pfam_Endoribonuclease_XendoU,pfam_Somatomedin_B_dom,smart_Somatomedin_B_dom,pfscan_Somatomedin_B_dom,prints_Somatomedin_B_chordata	-	no_errors	ENDOU	HGNC	ENSG00000111405	tier1	-	-	58	0	0.00	65	4	5.80
ENSG00000216166	0	genome.wustl.edu	37	3	183520323	183520324	+	RNA	INS	-	-	TA			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	3	183520323	183520324	-	TA	INS	ENSG00000216166	ENST00000401347	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	AC131160.1	Clone_based_ensembl_gene	ENSG00000216166	tier1			12	0	0.00	19	8	29.63
ENSG00000232274	0	genome.wustl.edu	37	1	143189128	143189128	+	RNA	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	143189128	143189128	G	A	SNP	ENSG00000232274	ENST00000447389	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	RP11-782C8.2	Clone_based_vega_gene	ENSG00000232274	tier1	rs202058739	-	13	0	0.00	25	10	28.57
ENSG00000233539	0	genome.wustl.edu	37	7	46728937	46728937	+	RNA	SNP	T	T	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	7	46728937	46728937	T	G	SNP	ENSG00000233539	ENST00000469937	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	AC011294.3	Clone_based_vega_gene	ENSG00000233539	tier1	-	-	16	0	0.00	16	13	44.83
ENSG00000235994	0	genome.wustl.edu	37	6	168377223	168377224	+	RNA	INS	-	-	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	6	168377223	168377224	0	A	INS	ENSG00000235994	ENST00000538528	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.633:0.622	-	-	-	no_errors	RP3-470B24.5	Clone_based_vega_gene	ENSG00000235994				165	0	0.00	99	8	7.48
ENSG00000237568	0	genome.wustl.edu	37	1	89726351	89726351	+	RNA	SNP	A	A	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	89726351	89726351	A	G	SNP	ENSG00000237568	ENST00000437128	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP4-620F22.2	Clone_based_vega_gene	ENSG00000237568	tier1	-	-	44	0	0.00	117	10	7.87
ENSG00000249054	0	genome.wustl.edu	37	12	68701	68701	+	RNA	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	12	68701	68701	G	A	SNP	ENSG00000249054	ENST00000504074	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-598F7.1	Clone_based_vega_gene	ENSG00000249054	tier1	-	-	76	0	0.00	103	28	21.37
ENSG00000257743	0	genome.wustl.edu	37	7	141897528	141897528	+	Silent	SNP	T	T	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	7	141897528	141897528	T	C	SNP	ENSG00000257743	ENST00000477922	human	ensembl	74_37	+1	putative	silent	c.4866	p.T1622	0.006	pfam_Glyco_hydro_31	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom,superfamily_P_trefoil,smart_P_trefoil	-	no_errors	RP11-1220K2.2	Clone_based_vega_gene	ENSG00000257743	tier1	-	-	37	0	0.00	35	4	10.26
ENSG00000267601	0	genome.wustl.edu	37	17	76851731	76851731	+	RNA	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	17	76851731	76851731	G	T	SNP	ENSG00000267601	ENST00000587434	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.018	-	-	-	no_errors	RP11-323N12.5	Clone_based_vega_gene	ENSG00000267601	tier1	-	-	38	0	0.00	51	4	7.27
ENSG00000267686	0	genome.wustl.edu	37	18	57792403	57792403	+	RNA	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	18	57792403	57792403	C	T	SNP	ENSG00000267686	ENST00000588794	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.010	-	-	-	no_errors	RP11-795H16.3	Clone_based_vega_gene	ENSG00000267686	tier1	-	-	35	0	0.00	9	28	75.68
ENSG00000267865	0	genome.wustl.edu	37	19	56220430	56220431	+	RNA	INS	-	-	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	19	56220430	56220431	-	T	INS	ENSG00000267865	ENST00000596293	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	CTD-2611O12.8	Clone_based_vega_gene	ENSG00000267865	tier1			10	0	0.00	37	5	11.90
ENSG00000273419	0	genome.wustl.edu	37	7	149556821	149556821	+	RNA	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	7	149556821	149556821	G	A	SNP	ENSG00000273419	ENST00000608963	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP4-751H13.7	Clone_based_vega_gene	ENSG00000273419	tier1	-	-	12	0	0.00	1	6	85.71
ENTPD4	0	genome.wustl.edu	37	8	23290462	23290462	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	8	23290462	23290462	G	T	SNP	ENTPD4	ENST00000358689	human	ensembl	74_37	-1	known	missense	c.1828	p.Q610K	1.000	NULL	pfam_GDA1_CD39_NTPase	-	no_errors	ENTPD4	HGNC	ENSG00000197217	tier1	-	-	88	0	0.00	61	4	6.15
EPB41L2	0	genome.wustl.edu	37	6	131247763	131247763	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	6	131247763	131247763	C	A	SNP	EPB41L2	ENST00000337057	human	ensembl	74_37	-1	known	missense	c.792	p.Q264H	1.000	pirsf_Band_41_protein,pfam_FERM_N,smart_Band_41_domain,pfscan_FERM_domain	pirsf_Band_41_protein,pfam_Band_4.1_C,pfam_SAB_dom,pfam_FERM_N,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like,pfscan_FERM_domain	-	no_errors	EPB41L2	HGNC	ENSG00000079819	tier1	-	-	55	0	0.00	60	4	6.25
EPGN	0	genome.wustl.edu	37	4	75178008	75178008	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	4	75178008	75178008	G	C	SNP	EPGN	ENST00000413830	human	ensembl	74_37	+1	known	missense	c.240	p.E80D	0.995	pfscan_EG-like_dom	pfscan_EG-like_dom	-	no_errors	EPGN	HGNC	ENSG00000182585	tier1	-	-	37	0	0.00	14	32	69.57
EPHB1	0	genome.wustl.edu	37	3	134884809	134884809	+	Splice_Site	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	3	134884809	134884809	G	T	SNP	EPHB1	ENST00000398015	human	ensembl	74_37	+1	known	splice_site	c.1586-1	e8-1	1.000	-	-	-	no_errors	EPHB1	HGNC	ENSG00000154928	tier1	-	-	49	0	0.00	57	5	8.06
EXT2	0	genome.wustl.edu	37	11	44219380	44219380	+	Missense_Mutation	SNP	A	A	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	11	44219380	44219380	A	C	SNP	EXT2	ENST00000395673	human	ensembl	74_37	+1	known	missense	c.1406	p.K469T	1.000	NULL	pfam_HexNAc_Trfase_a,pfam_Exostosin	-	no_errors	EXT2	HGNC	ENSG00000151348	tier1	-	-	36	0	0.00	29	21	42.00
EYS	0	genome.wustl.edu	37	6	65301235	65301235	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	6	65301235	65301235	T	G	SNP	EYS	ENST00000370616	human	ensembl	74_37	-1	known	missense	c.4525	p.N1509H	0.369	NULL	pfam_Laminin_G,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	EYS	HGNC	ENSG00000188107	tier1	-	-	34	0	0.00	7	20	74.07
EYS	0	genome.wustl.edu	37	6	66200490	66200490	+	Missense_Mutation	SNP	A	A	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	6	66200490	66200490	A	G	SNP	EYS	ENST00000370616	human	ensembl	74_37	-1	known	missense	c.859	p.S287P	0.063	smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	pfam_Laminin_G,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	EYS	HGNC	ENSG00000188107	tier1	-	-	37	0	0.00	7	39	84.78
EYS	0	genome.wustl.edu	37	6	66205228	66205228	+	Silent	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	6	66205228	66205228	G	T	SNP	EYS	ENST00000370616	human	ensembl	74_37	-1	known	silent	c.76	p.R26	0.000	NULL	pfam_Laminin_G,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	EYS	HGNC	ENSG00000188107				20	0	0.00	31	2	6.06
EZH1	0	genome.wustl.edu	37	17	40861907	40861907	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	17	40861907	40861907	C	T	SNP	EZH1	ENST00000428826	human	ensembl	74_37	-1	known	missense	c.1450	p.D484N	1.000	NULL	pfam_SET_dom,pfam_EZH2_WD-Binding,superfamily_Homeodomain-like,smart_SANT/Myb,smart_SET_dom,pfscan_SET_dom	-	no_errors	EZH1	HGNC	ENSG00000108799	tier1	-	-	52	0	0.00	101	8	7.34
EZH2	0	genome.wustl.edu	37	7	148525883	148525883	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	7	148525883	148525883	C	A	SNP	EZH2	ENST00000320356	human	ensembl	74_37	-1	known	missense	c.574	p.D192Y	1.000	smart_SANT/Myb	pfam_SET_dom,pfam_EZH2_WD-Binding,superfamily_Homeodomain-like,smart_SANT/Myb,smart_SET_dom,pfscan_SET_dom	-	no_errors	EZH2	HGNC	ENSG00000106462				22	0	0.00	28	2	6.67
FAM138B	0	genome.wustl.edu	37	2	114335558	114335558	+	Splice_Site	SNP	G	G	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	2	114335558	114335558	G	C	SNP	FAM138B	ENST00000432583	human	ensembl	74_37	+1	known	splice_site	c.NULL	NULL	0.629	-	-	-	no_errors	FAM138B	HGNC	ENSG00000226516	tier1	-	-	71	0	0.00	81	34	29.57
FAM65C	0	genome.wustl.edu	37	20	49208889	49208889	+	Silent	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	20	49208889	49208889	G	T	SNP	FAM65C	ENST00000535356	human	ensembl	74_37	-1	known	silent	c.2569	p.R857	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold,superfamily_Chemokine_IL8-like_dom	-	no_errors	FAM65C	HGNC	ENSG00000042062	tier1	-	-	14	0	0.00	15	13	46.43
FAM98C	0	genome.wustl.edu	37	19	38894313	38894313	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	19	38894313	38894313	G	A	SNP	FAM98C	ENST00000252530	human	ensembl	74_37	+1	known	missense	c.328	p.G110S	0.002	pfam_Uncharacterised_FAM98	pfam_Uncharacterised_FAM98	-	no_errors	FAM98C	HGNC	ENSG00000130244				21	0	0.00	35	3	7.89
FAT1	0	genome.wustl.edu	37	4	187540345	187540345	+	Silent	SNP	C	C	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	4	187540345	187540345	C	A	SNP	FAT1	ENST00000441802	human	ensembl	74_37	-1	known	silent	c.7395	p.L2465	0.620	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT1	HGNC	ENSG00000083857				36	0	0.00	26	3	10.00
FBN3	0	genome.wustl.edu	37	19	8210812	8210812	+	Silent	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	19	8210812	8210812	G	A	SNP	FBN3	ENST00000270509	human	ensembl	74_37	-1	known	silent	c.360	p.C120	1.000	smart_EG-like_dom,pirsf_FBN	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,pfam_EG-like_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pirsf_FBN,pfscan_EG-like_dom	-	no_errors	FBN3	HGNC	ENSG00000142449	tier1	-	-	35	0	0.00	50	4	7.41
FBXL14	0	genome.wustl.edu	37	12	1675955	1675955	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	12	1675955	1675955	G	T	SNP	FBXL14	ENST00000339235	human	ensembl	74_37	-1	known	missense	c.1216	p.P406T	0.337	NULL	pfam_Leu-rich_rpt,pfam_F-box_dom,pfam_Leu-rich_rpt_2,superfamily_F-box_dom,smart_Leu-rich_rpt_Cys-con_subtyp	-	no_errors	FBXL14	HGNC	ENSG00000171823	tier1	-	-	74	0	0.00	59	4	6.25
FBXO10	0	genome.wustl.edu	37	9	37541505	37541505	+	Missense_Mutation	SNP	C	C	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	9	37541505	37541505	C	G	SNP	FBXO10	ENST00000432825	human	ensembl	74_37	-1	known	missense	c.261	p.K87N	1.000	superfamily_F-box_dom	pfam_F-box_dom,superfamily_Pectin_lyase_fold/virulence,superfamily_F-box_dom,smart_F-box_dom,smart_PbH1,smart_Carb-bd_sugar_hydrolysis-dom,pfscan_F-box_dom,tigrfam_Para_beta_helix_rpt-2	-	no_errors	FBXO10	HGNC	ENSG00000147912	tier1	-	-	69	0	0.00	56	26	31.33
FBXW5	0	genome.wustl.edu	37	9	139836975	139836975	+	RNA	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	9	139836975	139836975	C	T	SNP	FBXW5	ENST00000483559	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FBXW5	HGNC	ENSG00000159069	tier1	-	-	28	0	0.00	14	4	22.22
FFAR2	0	genome.wustl.edu	37	19	35941156	35941156	+	Silent	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	19	35941156	35941156	G	A	SNP	FFAR2	ENST00000246549	human	ensembl	74_37	+1	known	silent	c.540	p.R180	0.735	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_GPR40-rel_orph	-	no_errors	FFAR2	HGNC	ENSG00000126262	tier1	-	-	70	0	0.00	50	5	9.09
FHAD1	0	genome.wustl.edu	37	1	15686998	15686998	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	15686998	15686998	C	A	SNP	FHAD1	ENST00000375999	human	ensembl	74_37	+1	known	missense	c.2695	p.L899M	0.027	NULL	pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	FHAD1	HGNC	ENSG00000142621				23	0	0.00	62	4	6.06
FN1	0	genome.wustl.edu	37	2	216279653	216279653	+	Silent	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	2	216279653	216279653	G	T	SNP	FN1	ENST00000354785	human	ensembl	74_37	-1	known	silent	c.1848	p.I616	1.000	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibronectin_type1,pfam_FN_type2_col-bd,superfamily_Kringle-like,superfamily_Fibronectin_type3,smart_Fibronectin_type1,smart_FN_type2_col-bd,smart_Fibronectin_type3,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Fibronectin_type3	-	no_errors	FN1	HGNC	ENSG00000115414	tier1	-	-	52	0	0.00	82	5	5.75
FRYL	0	genome.wustl.edu	37	4	48597621	48597621	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	4	48597621	48597621	G	T	SNP	FRYL	ENST00000358350	human	ensembl	74_37	-1	known	missense	c.1234	p.Q412K	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	FRYL	HGNC	ENSG00000075539				29	0	0.00	36	2	5.26
FSTL5	0	genome.wustl.edu	37	4	162307449	162307449	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	4	162307449	162307449	C	T	SNP	FSTL5	ENST00000306100	human	ensembl	74_37	-1	known	missense	c.1994	p.C665Y	1.000	NULL	pfam_Ig_I-set,pfam_Kazal_dom,pfam_Ig_V-set,smart_Kazal_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_EF_hand_dom,pfscan_Ig-like_dom	-	no_errors	FSTL5	HGNC	ENSG00000168843	tier1	-	-	44	0	0.00	56	4	6.67
GABRE	0	genome.wustl.edu	37	X	151122015	151122015	+	RNA	SNP	A	A	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	X	151122015	151122015	A	C	SNP	GABRE	ENST00000483564	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.481	-	-	-	no_errors	GABRE	HGNC	ENSG00000102287	tier1	-	-	9	0	0.00	2	18	90.00
GAD2	0	genome.wustl.edu	37	10	26505760	26505760	+	Frame_Shift_Del	DEL	T	T	-			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	10	26505760	26505760	T	-	DEL	GAD2	ENST00000259271	human	ensembl	74_37	+1	known	frame_shift_del	c.22	p.W9fs	1.000	NULL	pfam_PyrdxlP-dep_de-COase,superfamily_PyrdxlP-dep_Trfase	-	no_errors	GAD2	HGNC	ENSG00000136750	tier1			35	0	0.00	34	2	5.56
GALNT18	0	genome.wustl.edu	37	11	11400788	11400788	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	11	11400788	11400788	C	T	SNP	GALNT18	ENST00000227756	human	ensembl	74_37	-1	known	missense	c.619	p.E207K	0.560	pfam_Glyco_trans_2	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT18	HGNC	ENSG00000110328				20	0	0.00	23	2	8.00
GARNL3	0	genome.wustl.edu	37	9	130152998	130152998	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	9	130152998	130152998	G	C	SNP	GARNL3	ENST00000373387	human	ensembl	74_37	+1	known	missense	c.2822	p.S941T	0.993	NULL	pfam_Citron,pfam_Rap_GAP_dom,smart_Citron,pfscan_Rap_GAP_dom	-	no_errors	GARNL3	HGNC	ENSG00000136895	tier1	-	-	41	0	0.00	60	30	33.33
GATA2	0	genome.wustl.edu	37	3	128204731	128204731	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	3	128204731	128204731	C	A	SNP	GATA2	ENST00000341105	human	ensembl	74_37	-1	known	missense	c.710	p.G237V	0.990	pirsf_TF_GATA-1/2/3	pfam_Znf_GATA,smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	GATA2	HGNC	ENSG00000179348	tier1	-	-	39	0	0.00	29	5	14.71
GMNC	0	genome.wustl.edu	37	3	190573557	190573557	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	3	190573557	190573557	C	T	SNP	GMNC	ENST00000442080	human	ensembl	74_37	-1	known	missense	c.532	p.E178K	1.000	NULL	NULL	-	no_errors	GMNC	HGNC	ENSG00000205835	tier1	-	-	71	0	0.00	42	35	45.45
GNS	0	genome.wustl.edu	37	12	65141586	65141586	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	12	65141586	65141586	G	T	SNP	GNS	ENST00000258145	human	ensembl	74_37	-1	known	missense	c.365	p.S122Y	0.259	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core,pirsf_GlcNAc_6-SO4ase	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core,pirsf_GlcNAc_6-SO4ase	-	no_errors	GNS	HGNC	ENSG00000135677	tier1	-	-	48	0	0.00	66	4	5.71
GOLGB1	0	genome.wustl.edu	37	3	121395812	121395812	+	Silent	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	3	121395812	121395812	G	A	SNP	GOLGB1	ENST00000340645	human	ensembl	74_37	-1	known	silent	c.9090	p.L3030	0.986	NULL	superfamily_Prefoldin,superfamily_STAT_TF_coiled-coil,smart_Leu_zip_homeo	-	no_errors	GOLGB1	HGNC	ENSG00000173230	tier1	-	-	33	0	0.00	40	33	45.21
GPANK1	0	genome.wustl.edu	37	6	31631629	31631629	+	Splice_Site	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	6	31631629	31631629	C	T	SNP	GPANK1	ENST00000375893	human	ensembl	74_37	-1	known	splice_site	c.626+1	e1+1	1.000	-	-	-	no_errors	GPANK1	HGNC	ENSG00000204438	tier1	-	-	46	0	0.00	74	4	5.13
GPATCH8	0	genome.wustl.edu	37	17	42476757	42476757	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	17	42476757	42476757	G	T	SNP	GPATCH8	ENST00000591680	human	ensembl	74_37	-1	known	missense	c.2688	p.D896E	1.000	NULL	pfam_G_patch_dom,pfam_Znf_C2H2_jaz,smart_G_patch_dom,pfscan_Znf_C2H2,pfscan_G_patch_dom	-	no_errors	GPATCH8	HGNC	ENSG00000186566	tier1	-	-	45	0	0.00	62	5	7.46
GRAMD1B	0	genome.wustl.edu	37	11	123483491	123483491	+	Nonsense_Mutation	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	11	123483491	123483491	C	T	SNP	GRAMD1B	ENST00000322282	human	ensembl	74_37	+1	known	nonsense	c.1513	p.R505*	0.996	NULL	pfam_GRAM,smart_GRAM	-	no_errors	GRAMD1B	HGNC	ENSG00000023171	tier1	-	-	46	0	0.00	13	37	74.00
GRIA4	0	genome.wustl.edu	37	11	105797615	105797615	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	11	105797615	105797615	G	T	SNP	GRIA4	ENST00000282499	human	ensembl	74_37	+1	known	nonsense	c.1996	p.E666*	1.000	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIA4	HGNC	ENSG00000152578				28	0	0.00	22	2	8.33
GRIK1	0	genome.wustl.edu	37	21	31015238	31015238	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	21	31015238	31015238	G	T	SNP	GRIK1	ENST00000535441	human	ensembl	74_37	-1	known	missense	c.1006	p.H336N	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK1	HGNC	ENSG00000171189	tier1	-	-	65	0	0.00	53	4	7.02
GRP	0	genome.wustl.edu	37	18	56892729	56892729	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	18	56892729	56892729	T	G	SNP	GRP	ENST00000256857	human	ensembl	74_37	+1	known	missense	c.145	p.L49V	0.883	pfam_Bombesin	pfam_Bombesin	-	no_errors	GRP	HGNC	ENSG00000134443	tier1	-	-	24	0	0.00	14	30	68.18
GSAP	0	genome.wustl.edu	37	7	76982276	76982276	+	Silent	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	7	76982276	76982276	C	T	SNP	GSAP	ENST00000257626	human	ensembl	74_37	-1	known	silent	c.1476	p.V492	0.946	NULL	NULL	-	no_errors	GSAP	HGNC	ENSG00000186088				24	0	0.00	41	4	8.89
GTF3C5	0	genome.wustl.edu	37	9	135933250	135933250	+	Silent	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	9	135933250	135933250	G	T	SNP	GTF3C5	ENST00000372108	human	ensembl	74_37	+1	known	silent	c.1464	p.T488	0.000	NULL	pfam_TF_IIIC_su-5	-	no_errors	GTF3C5	HGNC	ENSG00000148308	tier1	-	-	48	0	0.00	63	4	5.97
GTPBP2	0	genome.wustl.edu	37	6	43594099	43594099	+	Nonsense_Mutation	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	6	43594099	43594099	G	A	SNP	GTPBP2	ENST00000307126	human	ensembl	74_37	-1	known	nonsense	c.262	p.Q88*	1.000	NULL	pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,superfamily_Transl_elong_EF1A/Init_IF2_C,superfamily_Transl_B-barrel	-	no_errors	GTPBP2	HGNC	ENSG00000172432	tier1	-	-	55	0	0.00	61	4	6.15
HHIPL2	0	genome.wustl.edu	37	1	222717196	222717196	+	Silent	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	222717196	222717196	G	A	SNP	HHIPL2	ENST00000343410	human	ensembl	74_37	-1	known	silent	c.657	p.P219	0.007	superfamily_Quinoprot_gluc/sorb_DH	pfam_Folate_rcpt-like,pfam_Glc/Sorbosone_DH,superfamily_Quinoprot_gluc/sorb_DH,superfamily_Saposin-like	-	no_errors	HHIPL2	HGNC	ENSG00000143512	tier1	-	-	52	0	0.00	58	7	10.77
HLCS	0	genome.wustl.edu	37	21	38309059	38309059	+	Missense_Mutation	SNP	A	A	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	21	38309059	38309059	A	G	SNP	HLCS	ENST00000336648	human	ensembl	74_37	-1	known	missense	c.686	p.L229P	0.030	NULL	pfam_BPL_LipA_LipB,pfam_BPL_C,tigrfam_Biotin_CoA_COase_ligase	-	no_errors	HLCS	HGNC	ENSG00000159267	tier1	-	-	30	0	0.00	50	4	7.41
HNRNPH1	0	genome.wustl.edu	37	5	179045245	179045245	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	5	179045245	179045245	G	T	SNP	HNRNPH1	ENST00000510678	human	ensembl	74_37	-1	known	missense	c.477	p.S159R	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	HNRNPH1	HGNC	ENSG00000169045				63	0	0.00	49	3	5.77
HOXB9	0	genome.wustl.edu	37	17	46703145	46703145	+	Missense_Mutation	SNP	C	C	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	17	46703145	46703145	C	G	SNP	HOXB9	ENST00000311177	human	ensembl	74_37	-1	known	missense	c.487	p.G163R	1.000	pfam_Hox9_activation_N,superfamily_Homeodomain-like,pirsf_Homeobox_Hox9	pfam_Hox9_activation_N,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pirsf_Homeobox_Hox9,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXB9	HGNC	ENSG00000170689	tier1	-	-	45	0	0.00	6	33	84.62
HRG	0	genome.wustl.edu	37	3	186395083	186395083	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	3	186395083	186395083	C	A	SNP	HRG	ENST00000232003	human	ensembl	74_37	+1	known	missense	c.989	p.A330D	0.000	NULL	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	-	no_errors	HRG	HGNC	ENSG00000113905	tier1	-	-	67	0	0.00	73	49	40.16
IFT81	0	genome.wustl.edu	37	12	110565878	110565878	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	12	110565878	110565878	C	T	SNP	IFT81	ENST00000242591	human	ensembl	74_37	+1	known	missense	c.172	p.P58S	1.000	NULL	NULL	-	no_errors	IFT81	HGNC	ENSG00000122970	tier1	-	-	29	0	0.00	93	6	6.06
INHBA	0	genome.wustl.edu	37	7	41730129	41730129	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	7	41730129	41730129	T	C	SNP	INHBA	ENST00000242208	human	ensembl	74_37	-1	known	missense	c.400	p.K134E	1.000	pfam_TGF-b_N	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C,prints_Inhibin_betaA,prints_Inhibin_asu	-	no_errors	INHBA	HGNC	ENSG00000122641	tier1	-	-	27	0	0.00	51	30	37.04
INO80D	0	genome.wustl.edu	37	2	206869709	206869709	+	Missense_Mutation	SNP	A	A	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	2	206869709	206869709	A	G	SNP	INO80D	ENST00000403263	human	ensembl	74_37	-1	known	missense	c.2467	p.S823P	1.000	NULL	NULL	-	no_errors	INO80D	HGNC	ENSG00000114933	tier1	-	-	29	0	0.00	21	13	38.24
IP6K2	0	genome.wustl.edu	37	3	48726155	48726155	+	Silent	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	3	48726155	48726155	G	T	SNP	IP6K2	ENST00000328631	human	ensembl	74_37	-1	known	silent	c.832	p.R278	1.000	pfam_IPK	pfam_IPK	-	no_errors	IP6K2	HGNC	ENSG00000068745				67	0	0.00	72	4	5.26
IQCJ-SCHIP1	0	genome.wustl.edu	37	3	159606665	159606665	+	Silent	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	3	159606665	159606665	C	T	SNP	IQCJ-SCHIP1	ENST00000485419	human	ensembl	74_37	+1	known	silent	c.1479	p.T493	0.099	pfam_SCHIP_1	pfam_SCHIP_1	-	no_errors	IQCJ-SCHIP1	HGNC	ENSG00000250588	tier1	-	-	24	0	0.00	46	44	48.35
ITPKB	0	genome.wustl.edu	37	1	226923246	226923246	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	226923246	226923246	G	T	SNP	ITPKB	ENST00000272117	human	ensembl	74_37	-1	known	missense	c.1914	p.D638E	1.000	NULL	pfam_IPK	-	no_errors	ITPKB	HGNC	ENSG00000143772	tier1	-	-	31	0	0.00	50	4	7.41
KAL1	0	genome.wustl.edu	37	X	8536274	8536274	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	X	8536274	8536274	G	T	SNP	KAL1	ENST00000262648	human	ensembl	74_37	-1	known	missense	c.1206	p.N402K	0.825	NULL	pfam_Fibronectin_type3,pfam_WAP-type_4-diS_core,superfamily_Fibronectin_type3,superfamily_WAP-type_4-diS_core,smart_WAP-type_4-diS_core,smart_Fibronectin_type3,pfscan_Fibronectin_type3,prints_WAP-type_4-diS_core	-	no_errors	KAL1	HGNC	ENSG00000011201				14	0	0.00	54	3	5.26
KCNU1	0	genome.wustl.edu	37	8	36694412	36694412	+	Silent	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	8	36694412	36694412	G	T	SNP	KCNU1	ENST00000399881	human	ensembl	74_37	+1	known	silent	c.1467	p.V489	0.935	pfam_K_chnl_Ca-activ_BK_asu,prints_K_chnl_Ca-activ_BK_asu	pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_Ca-activ_BK_asu	-	no_errors	KCNU1	HGNC	ENSG00000215262	tier1	-	-	37	0	0.00	49	4	7.55
KDM6B	0	genome.wustl.edu	37	17	7754804	7754804	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	17	7754804	7754804	C	A	SNP	KDM6B	ENST00000254846	human	ensembl	74_37	+1	known	missense	c.3953	p.P1318Q	0.996	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	KDM6B	HGNC	ENSG00000132510				73	0	0.00	60	4	6.25
KIAA0141	0	genome.wustl.edu	37	5	141309600	141309600	+	Silent	SNP	C	C	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	5	141309600	141309600	C	A	SNP	KIAA0141	ENST00000194118	human	ensembl	74_37	+1	known	silent	c.618	p.S206	0.009	NULL	pfam_Sel1-like,smart_Sel1-like	-	no_errors	KIAA0141	HGNC	ENSG00000081791				49	0	0.00	36	2	5.26
KIAA0922	0	genome.wustl.edu	37	4	154504393	154504393	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	4	154504393	154504393	G	T	SNP	KIAA0922	ENST00000409959	human	ensembl	74_37	+1	known	missense	c.944	p.W315L	0.999	pfam_DUF3651_TMEM131	pfam_DUF3651_TMEM131	-	no_errors	KIAA0922	HGNC	ENSG00000121210				19	0	0.00	66	4	5.71
KIAA1377	0	genome.wustl.edu	37	11	101829032	101829032	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	11	101829032	101829032	G	T	SNP	KIAA1377	ENST00000263468	human	ensembl	74_37	+1	known	missense	c.640	p.V214L	0.003	NULL	NULL	-	no_errors	KIAA1377	HGNC	ENSG00000110318	tier1	-	-	33	0	0.00	55	4	6.78
KIAA1407	0	genome.wustl.edu	37	3	113724645	113724645	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	3	113724645	113724645	T	G	SNP	KIAA1407	ENST00000295878	human	ensembl	74_37	-1	known	missense	c.1578	p.E526D	0.000	NULL	NULL	-	no_errors	KIAA1407	HGNC	ENSG00000163617	tier1	-	-	30	0	0.00	35	18	33.96
KIAA1467	0	genome.wustl.edu	37	12	13211471	13211471	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	12	13211471	13211471	G	T	SNP	KIAA1467	ENST00000197268	human	ensembl	74_37	+1	known	missense	c.520	p.G174W	0.851	superfamily_Quinonprotein_ADH-like_supfam	superfamily_Quinonprotein_ADH-like_supfam	-	no_errors	KIAA1467	HGNC	ENSG00000084444				50	0	0.00	70	4	5.41
KLHL1	0	genome.wustl.edu	37	13	70681794	70681794	+	Missense_Mutation	SNP	T	T	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	13	70681794	70681794	T	A	SNP	KLHL1	ENST00000377844	human	ensembl	74_37	-1	known	missense	c.38	p.H13L	1.000	NULL	pfam_Kelch_1,pfam_Kelch_2,pfam_BACK,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pfscan_BTB/POZ-like	-	no_errors	KLHL1	HGNC	ENSG00000150361	tier1	-	-	59	0	0.00	58	6	9.38
KLK5	0	genome.wustl.edu	37	19	51446942	51446942	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	19	51446942	51446942	G	A	SNP	KLK5	ENST00000336334	human	ensembl	74_37	-1	known	missense	c.827	p.T276M	1.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	KLK5	HGNC	ENSG00000167754				57	0	0.00	42	3	6.67
KLLN	0	genome.wustl.edu	37	10	89622062	89622063	+	Frame_Shift_Ins	INS	-	-	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	10	89622062	89622063	-	A	INS	KLLN	ENST00000445946	human	ensembl	74_37	-1	known	frame_shift_ins	c.183_182	p.R62fs	0.988:0.999	NULL	NULL	-	no_errors	KLLN	HGNC	ENSG00000227268	tier1			61	0	0.00	52	34	39.53
KMT2C	0	genome.wustl.edu	37	7	151860113	151860113	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	7	151860113	151860113	G	T	SNP	KMT2C	ENST00000355193	human	ensembl	74_37	-1	known	missense	c.10549	p.P3517T	0.974	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2C	HGNC	ENSG00000055609	tier1	-	-	49	0	0.00	52	4	7.14
KRT27	0	genome.wustl.edu	37	17	38938651	38938651	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	17	38938651	38938651	G	T	SNP	KRT27	ENST00000301656	human	ensembl	74_37	-1	known	missense	c.95	p.A32D	0.179	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT27	HGNC	ENSG00000171446	tier1	-	-	51	0	0.00	36	4	10.00
L1CAM	0	genome.wustl.edu	37	X	153130278	153130278	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	X	153130278	153130278	G	T	SNP	L1CAM	ENST00000543994	human	ensembl	74_37	-1	known	missense	c.3050	p.S1017Y	0.077	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	L1CAM	HGNC	ENSG00000198910	tier1	-	-	65	0	0.00	64	4	5.88
LAMB4	0	genome.wustl.edu	37	7	107696189	107696189	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	7	107696189	107696189	C	A	SNP	LAMB4	ENST00000205386	human	ensembl	74_37	-1	known	missense	c.3643	p.A1215S	0.079	NULL	pfam_EGF_laminin,pfam_Laminin_N,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,pfscan_Laminin_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB4	HGNC	ENSG00000091128	tier1	-	-	61	0	0.00	41	4	8.89
LAMC3	0	genome.wustl.edu	37	9	133967312	133967313	+	RNA	INS	-	-	CC			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	9	133967312	133967313	-	CC	INS	LAMC3	ENST00000462567	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	LAMC3	HGNC	ENSG00000050555	tier1			21	0	0.00	14	3	17.65
LEPR	0	genome.wustl.edu	37	1	66031227	66031227	+	Splice_Site	SNP	A	A	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	66031227	66031227	A	G	SNP	LEPR	ENST00000349533	human	ensembl	74_37	+1	known	splice_site	c.1-2	e1-2	0.996	-	-	-	no_errors	LEPR	HGNC	ENSG00000116678	tier1	-	-	48	0	0.00	57	64	52.46
LGALSL	0	genome.wustl.edu	37	2	64683535	64683535	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	2	64683535	64683535	G	T	SNP	LGALSL	ENST00000238875	human	ensembl	74_37	+1	known	missense	c.311	p.G104V	1.000	pfam_Galectin_CRD,superfamily_ConA-like_lec_gl_sf,smart_Galectin_CRD	pfam_Galectin_CRD,superfamily_ConA-like_lec_gl_sf,smart_Galectin_CRD	-	no_errors	LGALSL	HGNC	ENSG00000119862				53	0	0.00	72	4	5.26
LIMK2	0	genome.wustl.edu	37	22	31661933	31661933	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	22	31661933	31661933	C	A	SNP	LIMK2	ENST00000331728	human	ensembl	74_37	+1	known	missense	c.856	p.R286S	1.000	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Znf_LIM,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_PDZ,smart_Znf_LIM,smart_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_LIM,pfscan_PDZ,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LIMK2	HGNC	ENSG00000182541				43	0	0.00	37	2	5.13
LIPJ	0	genome.wustl.edu	37	10	90365400	90365400	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	10	90365400	90365400	C	A	SNP	LIPJ	ENST00000371939	human	ensembl	74_37	+1	known	missense	c.806	p.S269Y	0.079	pfam_AB_hydrolase_1	pfam_AB_hydrolase_lipase,pfam_AB_hydrolase_1	-	no_errors	LIPJ	HGNC	ENSG00000204022				15	0	0.00	33	3	8.33
LMAN1L	0	genome.wustl.edu	37	15	75115035	75115035	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	15	75115035	75115035	C	T	SNP	LMAN1L	ENST00000309664	human	ensembl	74_37	+1	known	missense	c.1184	p.A395V	0.917	NULL	pfam_Lectin_leg,superfamily_ConA-like_lec_gl_sf	-	no_errors	LMAN1L	HGNC	ENSG00000140506	tier1	-	-	46	0	0.00	64	9	12.33
LOC728586	0	genome.wustl.edu	37	5	127090028	127090028	+	RNA	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	5	127090028	127090028	G	T	SNP	LOC728586	ENST00000514853	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.949	-	-	-	no_errors	CTC-228N24.1	Clone_based_vega_gene	ENSG00000230561	tier1	-	-	33	0	0.00	41	4	8.89
LONP1	0	genome.wustl.edu	37	19	5693716	5693716	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	19	5693716	5693716	G	T	SNP	LONP1	ENST00000360614	human	ensembl	74_37	-1	known	missense	c.2385	p.D795E	0.993	pfam_Pept_S16_C,superfamily_Ribosomal_S5_D2-typ_fold,tigrfam_Lon_bac/euk-typ	pfam_Pept_S16_C,pfam_Pept_S16_N,pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-2,pfam_DNA_helicase_Holl-junc_RuvB_N,pfam_Prk_AAA_dom,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_P-loop_NTPase,superfamily_PUA-like_domain,smart_Pept_S16_N,smart_AAA+_ATPase,tigrfam_Lon_bac/euk-typ	-	no_errors	LONP1	HGNC	ENSG00000196365	tier1	-	-	38	0	0.00	22	4	15.38
LONRF1	0	genome.wustl.edu	37	8	12586755	12586755	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	8	12586755	12586755	C	T	SNP	LONRF1	ENST00000398246	human	ensembl	74_37	-1	known	missense	c.1775	p.R592K	1.000	pfam_Pept_S16_N,superfamily_PUA-like_domain,smart_Pept_S16_N	pfam_Pept_S16_N,pfam_Znf_C3HC4_RING-type,superfamily_PUA-like_domain,smart_TPR_repeat,smart_Znf_RING,smart_Pept_S16_N,pfscan_TPR-contain_dom,pfscan_Znf_RING	-	no_errors	LONRF1	HGNC	ENSG00000154359	tier1	-	-	16	0	0.00	19	8	29.63
LPHN3	0	genome.wustl.edu	37	4	62903486	62903486	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	4	62903486	62903486	G	T	SNP	LPHN3	ENST00000507625	human	ensembl	74_37	+1	known	missense	c.3602	p.C1201F	1.000	pfam_GPCR_2_latrophilin_rcpt_C	pfam_GPCR_2_latrophilin_rcpt_C,pfam_Olfac-like,pfam_DUF3497,pfam_GPCR_2_secretin-like,pfam_Lectin_gal-bd_dom,pfam_GPS_dom,pfam_GPCR_2_extracellular_dom,smart_Olfac-like,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_Lectin_gal-bd_dom,pfscan_Olfac-like,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_latrophilin,prints_GPCR_2_secretin-like	-	no_errors	LPHN3	HGNC	ENSG00000150471	tier1	-	-	68	0	0.00	54	4	6.90
LPIN2	0	genome.wustl.edu	37	18	2937789	2937789	+	Missense_Mutation	SNP	A	A	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	18	2937789	2937789	A	C	SNP	LPIN2	ENST00000261596	human	ensembl	74_37	-1	known	missense	c.1069	p.S357A	0.105	NULL	pfam_LNS2,pfam_Lipin_N,superfamily_HAD-like_dom,smart_LNS2	-	no_errors	LPIN2	HGNC	ENSG00000101577	tier1	-	-	39	0	0.00	37	24	39.34
LRRC41	0	genome.wustl.edu	37	1	46751588	46751588	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	46751588	46751588	G	A	SNP	LRRC41	ENST00000343304	human	ensembl	74_37	-1	known	missense	c.941	p.P314L	0.337	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	LRRC41	HGNC	ENSG00000132128	tier1	rs143695685	-	53	0	0.00	42	14	25.00
LRRC4C	0	genome.wustl.edu	37	11	40135924	40135924	+	Missense_Mutation	SNP	A	A	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	11	40135924	40135924	A	T	SNP	LRRC4C	ENST00000527150	human	ensembl	74_37	-1	known	missense	c.1919	p.I640N	1.000	NULL	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	LRRC4C	HGNC	ENSG00000148948	tier1	-	-	32	0	0.00	53	42	44.21
MAP4K2	0	genome.wustl.edu	37	11	64559877	64559877	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	11	64559877	64559877	G	T	SNP	MAP4K2	ENST00000294066	human	ensembl	74_37	-1	known	missense	c.1769	p.T590N	0.999	pfam_Citron,smart_Citron	pfam_Prot_kinase_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_dom	-	no_errors	MAP4K2	HGNC	ENSG00000168067	tier1	-	-	76	0	0.00	37	4	9.76
MAST1	0	genome.wustl.edu	37	19	12976154	12976154	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	19	12976154	12976154	G	A	SNP	MAST1	ENST00000251472	human	ensembl	74_37	+1	known	missense	c.1663	p.A555T	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_MA_Ser/Thr_Kinase_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_MAST_pre-PK_dom,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PDZ,pfscan_PDZ,pfscan_Prot_kinase_dom	-	no_errors	MAST1	HGNC	ENSG00000105613	tier1	-	-	58	0	0.00	8	31	79.49
MBD3	0	genome.wustl.edu	37	19	1578360	1578360	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	19	1578360	1578360	G	T	SNP	MBD3	ENST00000156825	human	ensembl	74_37	-1	known	missense	c.855	p.D285E	0.848	NULL	pfam_Methyl_CpG_DNA-bd,superfamily_DNA-bd_dom,superfamily_ARM-type_fold,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd	-	no_errors	MBD3	HGNC	ENSG00000071655	tier1	-	-	53	0	0.00	16	4	20.00
MBL2	0	genome.wustl.edu	37	10	54528082	54528082	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	10	54528082	54528082	C	A	SNP	MBL2	ENST00000373968	human	ensembl	74_37	-1	known	missense	c.562	p.D188Y	0.967	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,pfam_Collagen,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	MBL2	HGNC	ENSG00000165471				18	0	0.00	32	2	5.88
MGA	0	genome.wustl.edu	37	15	41961679	41961679	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	15	41961679	41961679	C	T	SNP	MGA	ENST00000219905	human	ensembl	74_37	+1	known	missense	c.587	p.S196F	1.000	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	pfam_TF_T-box,pfam_bHLH_dom,superfamily_p53-like_TF_DNA-bd,superfamily_bHLH_dom,smart_TF_T-box,smart_bHLH_dom,pfscan_bHLH_dom,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	MGA	HGNC	ENSG00000174197				16	0	0.00	50	5	9.09
MID1	0	genome.wustl.edu	37	X	10535076	10535076	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	X	10535076	10535076	C	A	SNP	MID1	ENST00000317552	human	ensembl	74_37	-1	known	missense	c.512	p.R171L	1.000	smart_Znf_B-box,pfscan_Znf_B-box	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Fibronectin_type3,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	MID1	HGNC	ENSG00000101871				24	0	0.00	41	4	8.89
MKRN3	0	genome.wustl.edu	37	15	23812263	23812263	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	15	23812263	23812263	T	C	SNP	MKRN3	ENST00000314520	human	ensembl	74_37	+1	known	missense	c.1334	p.L445P	0.002	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_CCCH,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	MKRN3	HGNC	ENSG00000179455	tier1	-	-	47	0	0.00	30	35	53.85
MPO	0	genome.wustl.edu	37	17	56357278	56357278	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	17	56357278	56357278	C	T	SNP	MPO	ENST00000340482	human	ensembl	74_37	-1	known	missense	c.346	p.A116T	0.980	NULL	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr	-	no_errors	MPO	HGNC	ENSG00000005381	tier1	-	-	87	0	0.00	61	13	17.57
MT-CO1	0	genome.wustl.edu	37	MT	7332	7332	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	MT	7332	7332	G	A	SNP	MT-CO1	ENST00000361624	human	ensembl	74_37	+1	known	missense	c.1429	p.A477T	NULL	superfamily_Cyt_c_Oxase_su1_dom,pfscan_Cyt_c_Oxase_su1_dom	pfam_Cyt_c_Oxase_su1,superfamily_Cyt_c_Oxase_su1_dom,pfscan_Cyt_c_Oxase_su1_dom,prints_Cyt_c_Oxase_su1	-	no_errors	MT-CO1	HGNC	ENSG00000198804	tier1	-	-	31	0	0.00	3	144	97.96
MTOR	0	genome.wustl.edu	37	1	11206789	11206789	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	11206789	11206789	C	T	SNP	MTOR	ENST00000361445	human	ensembl	74_37	-1	known	missense	c.4630	p.A1544T	1.000	pfam_PIK-rel_kinase_FAT,pfscan_PIK_FAT	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_DUF3385_TOR,pfam_Rapamycin-bd_dom,pfam_FATC,superfamily_ARM-type_fold,superfamily_Kinase-like_dom,superfamily_Rapamycin-bd_dom,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	MTOR	HGNC	ENSG00000198793	tier1	-	-	37	0	0.00	73	4	5.19
MUC12	0	genome.wustl.edu	37	7	100643679	100643679	+	Missense_Mutation	SNP	T	T	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	7	100643679	100643679	T	A	SNP	MUC12	ENST00000536621	human	ensembl	74_37	+1	known	missense	c.9835	p.S3279T	0.028	NULL	pfam_SEA_dom	-	no_errors	MUC12	HGNC	ENSG00000205277	tier1	-	-	432	0	0.00	679	59	7.98
MUC17	0	genome.wustl.edu	37	7	100680772	100680772	+	Silent	SNP	T	T	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	7	100680772	100680772	T	A	SNP	MUC17	ENST00000306151	human	ensembl	74_37	+1	known	silent	c.6075	p.S2025	0.264	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	MUC17	HGNC	ENSG00000169876	tier1	-	-	59	0	0.00	57	41	41.84
MUC17	0	genome.wustl.edu	37	7	100680773	100680773	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	7	100680773	100680773	C	A	SNP	MUC17	ENST00000306151	human	ensembl	74_37	+1	known	missense	c.6076	p.P2026T	0.207	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	MUC17	HGNC	ENSG00000169876	tier1	-	-	60	0	0.00	56	41	42.27
MUC4	0	genome.wustl.edu	37	3	195490953	195490953	+	Silent	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	3	195490953	195490953	G	T	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	silent	c.14007	p.P4669	0.653	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113				62	0	0.00	59	4	6.35
MYH4	0	genome.wustl.edu	37	17	10351436	10351436	+	Missense_Mutation	SNP	A	A	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	17	10351436	10351436	A	C	SNP	MYH4	ENST00000255381	human	ensembl	74_37	-1	known	missense	c.4664	p.L1555R	1.000	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH4	HGNC	ENSG00000264424	tier1	-	-	9	0	0.00	4	13	76.47
MZF1	0	genome.wustl.edu	37	19	59073508	59073508	+	Silent	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	19	59073508	59073508	C	T	SNP	MZF1	ENST00000215057	human	ensembl	74_37	-1	known	silent	c.2136	p.Q712	0.998	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	MZF1	HGNC	ENSG00000099326	tier1	-	-	73	0	0.00	26	9	25.71
NAF1	0	genome.wustl.edu	37	4	164050200	164050200	+	Frame_Shift_Del	DEL	G	G	-			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	4	164050200	164050200	G	-	DEL	NAF1	ENST00000274054	human	ensembl	74_37	-1	known	frame_shift_del	c.1334	p.P445fs	0.226	NULL	pfam_H/ACA_rnp_Gar1/Naf1,superfamily_Transl_B-barrel	-	no_errors	NAF1	HGNC	ENSG00000145414	tier1			23	0	0.00	21	2	8.70
NBPF10	0	genome.wustl.edu	37	1	145323656	145323656	+	Missense_Mutation	SNP	A	A	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	145323656	145323656	A	T	SNP	NBPF10	ENST00000342960	human	ensembl	74_37	+1	known	missense	c.3493	p.I1165F	0.007	NULL	pfam_NBPF_dom	-	no_errors	NBPF10	HGNC	ENSG00000163386				56	0	0.00	84	5	5.62
NCKAP5	0	genome.wustl.edu	37	2	133540288	133540288	+	Missense_Mutation	SNP	T	T	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	2	133540288	133540288	T	A	SNP	NCKAP5	ENST00000317721	human	ensembl	74_37	-1	known	missense	c.4096	p.S1366C	0.996	NULL	NULL	-	no_errors	NCKAP5	HGNC	ENSG00000176771	tier1	-	-	30	0	0.00	27	8	22.86
NCL	0	genome.wustl.edu	37	2	232323098	232323098	+	Nonsense_Mutation	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	2	232323098	232323098	G	A	SNP	NCL	ENST00000322723	human	ensembl	74_37	-1	known	nonsense	c.1168	p.R390*	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,smart_RRM_dom_euk,pfscan_RRM_dom	-	no_errors	NCL	HGNC	ENSG00000115053				15	0	0.00	60	4	6.25
NEDD4L	0	genome.wustl.edu	37	18	56063468	56063468	+	Silent	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	18	56063468	56063468	G	T	SNP	NEDD4L	ENST00000400345	human	ensembl	74_37	+1	known	silent	c.2895	p.V965	1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_C2_dom,superfamily_WW_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom,prints_C2_dom	-	no_errors	NEDD4L	HGNC	ENSG00000049759	tier1	-	-	27	0	0.00	65	5	7.14
NEK5	0	genome.wustl.edu	37	13	52657463	52657463	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	13	52657463	52657463	G	T	SNP	NEK5	ENST00000355568	human	ensembl	74_37	-1	known	missense	c.1505	p.T502N	0.997	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	NEK5	HGNC	ENSG00000197168				26	0	0.00	60	4	6.25
NELL1	0	genome.wustl.edu	37	11	21592431	21592431	+	Missense_Mutation	SNP	A	A	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	11	21592431	21592431	A	T	SNP	NELL1	ENST00000357134	human	ensembl	74_37	+1	known	missense	c.2102	p.K701M	1.000	pfam_VWF_C,smart_VWC_out,smart_VWF_C,pfscan_VWF_C	pfam_EGF-like_Ca-bd_dom,pfam_VWF_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_VWC_out,smart_VWF_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_VWF_C	-	no_errors	NELL1	HGNC	ENSG00000165973	tier1	-	-	48	0	0.00	27	14	34.15
NEXN	0	genome.wustl.edu	37	1	78383667	78383667	+	Missense_Mutation	SNP	A	A	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	78383667	78383667	A	T	SNP	NEXN	ENST00000334785	human	ensembl	74_37	+1	known	missense	c.242	p.D81V	1.000	NULL	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	NEXN	HGNC	ENSG00000162614	tier1	-	-	27	0	0.00	46	29	38.67
NIN	0	genome.wustl.edu	37	14	51233526	51233526	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	14	51233526	51233526	C	T	SNP	NIN	ENST00000245441	human	ensembl	74_37	-1	known	missense	c.1517	p.R506K	0.833	superfamily_tRNA-bd_arm	superfamily_tRNA-bd_arm,pfscan_EF_hand_dom	-	no_errors	NIN	HGNC	ENSG00000100503	tier1	-	-	30	0	0.00	10	28	73.68
NPC1	0	genome.wustl.edu	37	18	21140316	21140316	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	18	21140316	21140316	G	A	SNP	NPC1	ENST00000269228	human	ensembl	74_37	-1	known	missense	c.760	p.P254S	1.000	tigrfam_NP_C_type	pfam_Patched,pfam_MMPL_dom,pfscan_SSD,tigrfam_NP_C_type	-	no_errors	NPC1	HGNC	ENSG00000141458	tier1	-	-	19	0	0.00	21	9	30.00
NR3C2	0	genome.wustl.edu	37	4	149181246	149181246	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	4	149181246	149181246	G	T	SNP	NR3C2	ENST00000355292	human	ensembl	74_37	-1	known	missense	c.1781	p.T594N	1.000	NULL	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	NR3C2	HGNC	ENSG00000151623	tier1	-	-	44	0	0.00	54	4	6.90
NR5A2	0	genome.wustl.edu	37	1	200017441	200017441	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	200017441	200017441	C	T	SNP	NR5A2	ENST00000367362	human	ensembl	74_37	+1	known	missense	c.605	p.A202V	1.000	superfamily_Nucl_hormone_rcpt_ligand-bd,pirsf_Steroidogenic_factor_1	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pirsf_Steroidogenic_factor_1,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	NR5A2	HGNC	ENSG00000116833	tier1	-	-	43	0	0.00	40	36	47.37
NTN5	0	genome.wustl.edu	37	19	49174223	49174223	+	Silent	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	19	49174223	49174223	G	T	SNP	NTN5	ENST00000270235	human	ensembl	74_37	-1	known	silent	c.21	p.L7	0.990	NULL	pfam_Netrin_module_non-TIMP,pfam_EGF_laminin,superfamily_TIMP-like_OB-fold,smart_EGF_laminin,smart_Netrin_module_non-TIMP,pfscan_EGF_laminin,pfscan_Netrin_domain	-	no_errors	NTN5	HGNC	ENSG00000142233				63	0	0.00	35	3	7.89
NUP107	0	genome.wustl.edu	37	12	69126365	69126366	+	RNA	INS	-	-	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	12	69126365	69126366	-	A	INS	NUP107	ENST00000401003	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	NUP107	HGNC	ENSG00000111581	tier1			30	0	0.00	46	10	17.86
NUP133	0	genome.wustl.edu	37	1	229631291	229631291	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	229631291	229631291	C	A	SNP	NUP133	ENST00000261396	human	ensembl	74_37	-1	known	missense	c.997	p.A333S	1.000	pfam_Nucleoporin_Nup133/Nup155_N	pfam_Nucleoporin_Nup133/Nup155_C,pfam_Nucleoporin_Nup133/Nup155_N	-	no_errors	NUP133	HGNC	ENSG00000069248	tier1	-	-	18	0	0.00	21	9	30.00
NUP93	0	genome.wustl.edu	37	16	56782289	56782289	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	16	56782289	56782289	C	T	SNP	NUP93	ENST00000308159	human	ensembl	74_37	+1	known	missense	c.130	p.R44C	1.000	NULL	pfam_Nucleoporin_int_Nup93/Nic96	-	no_errors	NUP93	HGNC	ENSG00000102900	tier1	-	-	40	0	0.00	6	17	73.91
OGDHL	0	genome.wustl.edu	37	10	50951015	50951015	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	10	50951015	50951015	C	T	SNP	OGDHL	ENST00000374103	human	ensembl	74_37	-1	known	missense	c.1871	p.R624H	1.000	pirsf_2oxoglutarate_DH_E1,tigrfam_2oxoglutarate_DH_E1	pfam_DH_E1,pfam_Transketolase-like_Pyr-bd,smart_Transketolase-like_Pyr-bd,pirsf_2oxoglutarate_DH_E1,tigrfam_2oxoglutarate_DH_E1	-	no_errors	OGDHL	HGNC	ENSG00000197444	tier1	-	-	50	0	0.00	29	20	40.82
OGG1	0	genome.wustl.edu	37	3	9792631	9792631	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	3	9792631	9792631	G	T	SNP	OGG1	ENST00000302036	human	ensembl	74_37	+1	known	missense	c.140	p.W47L	1.000	pfam_OGG_N,tigrfam_Ogg	pfam_OGG_N,pfam_HhH-GPD_domain,superfamily_DNA_glycosylase,smart_HhH-GPD_domain,tigrfam_Ogg	-	no_errors	OGG1	HGNC	ENSG00000114026	tier1	-	-	42	0	0.00	44	5	10.20
OR10A2	0	genome.wustl.edu	37	11	6891759	6891759	+	Silent	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	11	6891759	6891759	G	A	SNP	OR10A2	ENST00000307322	human	ensembl	74_37	+1	known	silent	c.774	p.K258	0.953	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10A2	HGNC	ENSG00000170790	tier1	-	-	34	0	0.00	41	25	37.88
OR10Z1	0	genome.wustl.edu	37	1	158576277	158576277	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	158576277	158576277	T	C	SNP	OR10Z1	ENST00000361284	human	ensembl	74_37	+1	known	missense	c.49	p.F17L	0.994	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10Z1	HGNC	ENSG00000198967	tier1	-	-	20	0	0.00	11	18	62.07
OR2J3	0	genome.wustl.edu	37	6	29079992	29079992	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	6	29079992	29079992	G	A	SNP	OR2J3	ENST00000377169	human	ensembl	74_37	+1	known	missense	c.325	p.A109T	0.183	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2J3	HGNC	ENSG00000204701				49	0	0.00	95	5	5.00
OR2L8	0	genome.wustl.edu	37	1	248112865	248112865	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	248112865	248112865	G	A	SNP	OR2L8	ENST00000357191	human	ensembl	74_37	+1	known	missense	c.706	p.A236T	0.054	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2L8	HGNC	ENSG00000196936	tier1	-	-	53	0	0.00	64	49	43.36
OR4C12	0	genome.wustl.edu	37	11	50003113	50003113	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	11	50003113	50003113	C	A	SNP	OR4C12	ENST00000335238	human	ensembl	74_37	-1	known	missense	c.925	p.D309Y	0.000	NULL	pfam_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR4C12	HGNC	ENSG00000221954				15	0	0.00	19	2	9.52
OR4C16	0	genome.wustl.edu	37	11	55340159	55340159	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	11	55340159	55340159	G	A	SNP	OR4C16	ENST00000314634	human	ensembl	74_37	+1	known	missense	c.556	p.A186T	0.563	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C16	HGNC	ENSG00000181935	tier1	-	-	40	0	0.00	40	33	45.21
OR5L1	0	genome.wustl.edu	37	11	55579180	55579180	+	Missense_Mutation	SNP	A	A	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	11	55579180	55579180	A	C	SNP	OR5L1	ENST00000333973	human	ensembl	74_37	+1	known	missense	c.238	p.K80Q	0.019	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5L1	HGNC	ENSG00000186117	tier1	-	-	64	0	0.00	53	45	45.92
OR5T3	0	genome.wustl.edu	37	11	56020653	56020653	+	Missense_Mutation	SNP	A	A	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	11	56020653	56020653	A	C	SNP	OR5T3	ENST00000303059	human	ensembl	74_37	+1	known	missense	c.978	p.E326D	0.884	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5T3	HGNC	ENSG00000172489	tier1	-	-	21	0	0.00	22	16	42.11
OR5W2	0	genome.wustl.edu	37	11	55681965	55681965	+	Missense_Mutation	SNP	A	A	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	11	55681965	55681965	A	C	SNP	OR5W2	ENST00000344514	human	ensembl	74_37	-1	known	missense	c.94	p.L32V	0.017	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5W2	HGNC	ENSG00000187612	tier1	-	-	41	0	0.00	48	37	43.53
OR8J1	0	genome.wustl.edu	37	11	56128223	56128223	+	Silent	SNP	T	T	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	11	56128223	56128223	T	G	SNP	OR8J1	ENST00000303039	human	ensembl	74_37	+1	known	silent	c.501	p.S167	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8J1	HGNC	ENSG00000172487	tier1	-	-	24	0	0.00	27	14	34.15
P4HB	0	genome.wustl.edu	37	17	79805186	79805186	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	17	79805186	79805186	G	T	SNP	P4HB	ENST00000331483	human	ensembl	74_37	-1	known	missense	c.662	p.T221N	1.000	superfamily_Thioredoxin-like_fold,tigrfam_Prot_disulphide_isomerase	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold,prints_Thioredoxin,tigrfam_Prot_disulphide_isomerase,tigrfam_Disulphide_isomerase	-	no_errors	P4HB	HGNC	ENSG00000185624				80	0	0.00	71	4	5.33
PAPPA2	0	genome.wustl.edu	37	1	176564726	176564726	+	Silent	SNP	C	C	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	176564726	176564726	C	G	SNP	PAPPA2	ENST00000367662	human	ensembl	74_37	+1	known	silent	c.1986	p.P662	0.972	NULL	pfam_Notch_dom,pfam_Sushi_SCR_CCP,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA2	HGNC	ENSG00000116183	tier1	-	-	45	0	0.00	26	21	44.68
PDCD11	0	genome.wustl.edu	37	10	105169561	105169561	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	10	105169561	105169561	G	T	SNP	PDCD11	ENST00000369797	human	ensembl	74_37	+1	known	missense	c.976	p.A326S	0.001	superfamily_NA-bd_OB-fold,smart_RNA-binding_domain_S1,pfscan_Rbsml_prot_S1_RNA-bd_dom	pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_Suf,superfamily_NA-bd_OB-fold,smart_RNA-binding_domain_S1,smart_HAT,pfscan_TPR-contain_dom,pfscan_Rbsml_prot_S1_RNA-bd_dom,prints_Ribosomal_S1	-	no_errors	PDCD11	HGNC	ENSG00000148843	tier1	-	-	30	0	0.00	56	4	6.67
PDE1A	0	genome.wustl.edu	37	2	183051292	183051292	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	2	183051292	183051292	G	T	SNP	PDE1A	ENST00000456212	human	ensembl	74_37	-1	known	missense	c.1279	p.P427T	1.000	pfam_PDEase_catalytic_dom	pfam_PDEase_catalytic_dom,pfam_PDEase_N,superfamily_GRIP,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE1A	HGNC	ENSG00000115252				11	0	0.00	33	2	5.71
PDE2A	0	genome.wustl.edu	37	11	72290624	72290624	+	Missense_Mutation	SNP	A	A	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	11	72290624	72290624	A	C	SNP	PDE2A	ENST00000334456	human	ensembl	74_37	-1	known	missense	c.2210	p.I737S	1.000	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE2A	HGNC	ENSG00000186642	tier1	-	-	112	0	0.00	72	18	20.00
PDHA2	0	genome.wustl.edu	37	4	96761634	96761634	+	Silent	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	4	96761634	96761634	C	T	SNP	PDHA2	ENST00000295266	human	ensembl	74_37	+1	known	silent	c.333	p.H111	0.258	pfam_DH_E1,tigrfam_Pyrv_DH_E1_asu_subgrp-y	pfam_DH_E1,tigrfam_Pyrv_DH_E1_asu_subgrp-y	-	no_errors	PDHA2	HGNC	ENSG00000163114	tier1	-	-	55	0	0.00	42	5	10.64
PGBD4	0	genome.wustl.edu	37	15	34396159	34396159	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	15	34396159	34396159	C	A	SNP	PGBD4	ENST00000397766	human	ensembl	74_37	+1	known	missense	c.1427	p.P476H	0.083	NULL	NULL	-	no_errors	PGBD4	HGNC	ENSG00000182405				12	0	0.00	30	2	6.25
PHC2	0	genome.wustl.edu	37	1	33841079	33841079	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	33841079	33841079	C	T	SNP	PHC2	ENST00000419414	human	ensembl	74_37	-1	known	missense	c.62	p.S21N	0.982	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM,pfscan_Znf_FCS	-	no_errors	PHC2	HGNC	ENSG00000134686	tier1	-	-	32	0	0.00	29	15	34.09
PHRF1	0	genome.wustl.edu	37	11	601669	601669	+	Nonsense_Mutation	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	11	601669	601669	C	T	SNP	PHRF1	ENST00000264555	human	ensembl	74_37	+1	known	nonsense	c.1120	p.R374*	0.013	NULL	pfam_Znf_PHD-finger,pfam_Znf_C3HC4_RING-type,superfamily_Znf_FYVE_PHD,smart_Znf_RING,smart_Znf_PHD,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	PHRF1	HGNC	ENSG00000070047	tier1	-	-	56	0	0.00	80	22	21.57
PKHD1	0	genome.wustl.edu	37	6	51613257	51613257	+	Missense_Mutation	SNP	A	A	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	6	51613257	51613257	A	C	SNP	PKHD1	ENST00000371117	human	ensembl	74_37	-1	known	missense	c.9157	p.L3053V	0.968	superfamily_Pectin_lyase_fold/virulence,smart_PbH1	pfam_IPT,pfam_G8_domain,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,smart_IPT,smart_PbH1	-	no_errors	PKHD1	HGNC	ENSG00000170927	tier1	-	-	33	0	0.00	34	20	37.04
PLD5	0	genome.wustl.edu	37	1	242253189	242253189	+	Silent	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	242253189	242253189	G	A	SNP	PLD5	ENST00000536534	human	ensembl	74_37	-1	known	silent	c.1578	p.D526	0.001	NULL	smart_PLipase_D/transphosphatidylase	-	no_errors	PLD5	HGNC	ENSG00000180287	tier1	-	-	85	0	0.00	47	43	47.78
PLD5	0	genome.wustl.edu	37	1	242277295	242277295	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	242277295	242277295	T	C	SNP	PLD5	ENST00000536534	human	ensembl	74_37	-1	known	missense	c.967	p.S323G	1.000	NULL	smart_PLipase_D/transphosphatidylase	-	no_errors	PLD5	HGNC	ENSG00000180287	tier1	-	-	37	0	0.00	31	22	41.51
PLEKHG5	0	genome.wustl.edu	37	1	6530819	6530819	+	Silent	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	6530819	6530819	G	T	SNP	PLEKHG5	ENST00000537245	human	ensembl	74_37	-1	known	silent	c.1755	p.R585	0.015	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PLEKHG5	HGNC	ENSG00000171680	tier1	-	-	27	0	0.00	26	12	31.58
PLEKHM1P	0	genome.wustl.edu	37	17	62783373	62783373	+	RNA	SNP	A	A	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	17	62783373	62783373	A	G	SNP	PLEKHM1P	ENST00000578036	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	PLEKHM1P	HGNC	ENSG00000214176	tier1	-	-	81	0	0.00	83	5	5.68
PLIN2	0	genome.wustl.edu	37	9	19121077	19121077	+	Silent	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	9	19121077	19121077	G	A	SNP	PLIN2	ENST00000276914	human	ensembl	74_37	-1	known	silent	c.396	p.S132	0.994	pfam_Perilipin,pirsf_Perilipin	pfam_Perilipin,pirsf_Perilipin	-	no_errors	PLIN2	HGNC	ENSG00000147872				11	0	0.00	26	4	12.90
PMPCA	0	genome.wustl.edu	37	9	139310795	139310795	+	Silent	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	9	139310795	139310795	G	T	SNP	PMPCA	ENST00000371717	human	ensembl	74_37	+1	known	silent	c.585	p.L195	0.927	pfam_Pept_M16_N,superfamily_Metalloenz_LuxS/M16	pfam_Pept_M16_N,pfam_Peptidase_M16_C,superfamily_Metalloenz_LuxS/M16	-	no_errors	PMPCA	HGNC	ENSG00000165688	tier1	-	-	37	0	0.00	73	4	5.19
PRAMEF4	0	genome.wustl.edu	37	1	12939505	12939505	+	Missense_Mutation	SNP	A	A	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	12939505	12939505	A	C	SNP	PRAMEF4	ENST00000235349	human	ensembl	74_37	-1	known	missense	c.1297	p.F433V	0.000	NULL	NULL	-	no_errors	PRAMEF4	HGNC	ENSG00000243073	tier1	-	-	191	0	0.00	212	183	46.33
PRAMEF7	0	genome.wustl.edu	37	1	12979871	12979871	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	12979871	12979871	T	G	SNP	PRAMEF7	ENST00000330881	human	ensembl	74_37	+1	known	missense	c.1063	p.L355V	0.135	NULL	NULL	-	no_errors	PRAMEF7	HGNC	ENSG00000204510	tier1	-	-	173	0	0.00	219	93	29.71
PRCD	0	genome.wustl.edu	37	17	74538711	74538711	+	RNA	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	17	74538711	74538711	G	A	SNP	PRCD	ENST00000397633	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.465	-	-	-	no_errors	PRCD	HGNC	ENSG00000214140	tier1	-	-	26	0	0.00	21	53	71.62
PRSS38	0	genome.wustl.edu	37	1	228033841	228033841	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	228033841	228033841	C	T	SNP	PRSS38	ENST00000366757	human	ensembl	74_37	+1	known	missense	c.913	p.L305F	0.000	NULL	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	PRSS38	HGNC	ENSG00000185888	tier1	-	-	43	0	0.00	44	22	33.33
PSMB3	0	genome.wustl.edu	37	17	36920394	36920394	+	Missense_Mutation	SNP	A	A	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	17	36920394	36920394	A	T	SNP	PSMB3	ENST00000225426	human	ensembl	74_37	+1	known	missense	c.592	p.R198W	1.000	NULL	pfam_Proteasome_sua/b	-	no_errors	PSMB3	HGNC	ENSG00000108294	tier1	-	-	71	0	0.00	60	55	47.83
PSMB5	0	genome.wustl.edu	37	14	23503912	23503912	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	14	23503912	23503912	G	T	SNP	PSMB5	ENST00000361611	human	ensembl	74_37	-1	known	missense	c.179	p.T60K	1.000	pfam_Proteasome_sua/b	pfam_Proteasome_sua/b,prints_Pept_T1A_subB	-	no_errors	PSMB5	HGNC	ENSG00000100804				62	0	0.00	49	4	7.55
PTH1R	0	genome.wustl.edu	37	3	46944902	46944902	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	3	46944902	46944902	G	T	SNP	PTH1R	ENST00000313049	human	ensembl	74_37	+1	known	missense	c.1538	p.G513V	1.000	prints_GPCR_2_parathyroid_rcpt	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like,prints_GPCR_2_parathyroid_rcpt	-	no_errors	PTH1R	HGNC	ENSG00000160801				53	0	0.00	74	4	5.13
PTP4A2	0	genome.wustl.edu	37	1	32384717	32384717	+	RNA	DEL	A	A	-			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	32384717	32384717	A	-	DEL	PTP4A2	ENST00000532289	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PTP4A2	HGNC	ENSG00000184007	tier1			20	0	0.00	35	5	12.50
PTPN7	0	genome.wustl.edu	37	1	202119449	202119449	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	202119449	202119449	G	A	SNP	PTPN7	ENST00000309017	human	ensembl	74_37	-1	known	missense	c.1294	p.R432W	0.998	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_KIM-con,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN7	HGNC	ENSG00000143851	tier1	-	-	68	0	0.00	87	21	19.44
RAB11FIP2	0	genome.wustl.edu	37	10	119765266	119765267	+	RNA	INS	-	-	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	10	119765266	119765267	-	T	INS	RAB11FIP2	ENST00000476207	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RAB11FIP2	HGNC	ENSG00000107560	tier1			23	0	0.00	17	4	19.05
RABGAP1L	0	genome.wustl.edu	37	1	174190247	174190247	+	Silent	SNP	A	A	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	174190247	174190247	A	G	SNP	RABGAP1L	ENST00000251507	human	ensembl	74_37	+1	known	silent	c.276	p.P92	0.762	NULL	pfam_Rab-GTPase-TBC_dom,pfam_Kinesin-like,pfam_PTB/PI_dom,superfamily_Rab-GTPase-TBC_dom,smart_PTB/PI_dom,smart_Rab-GTPase-TBC_dom,pfscan_PTB/PI_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	RABGAP1L	HGNC	ENSG00000152061	tier1	-	-	31	0	0.00	36	22	37.93
RBM10	0	genome.wustl.edu	37	X	47039309	47039309	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	X	47039309	47039309	G	A	SNP	RBM10	ENST00000377604	human	ensembl	74_37	+1	known	missense	c.932	p.S311N	1.000	smart_RRM_dom,pfscan_RRM_dom	pfam_G_patch_dom,pfam_RRM_dom,pfam_Znf_RanBP2,smart_RRM_dom,smart_Znf_RanBP2,smart_G_patch_dom,pfscan_Znf_RanBP2,pfscan_Znf_C2H2,pfscan_G_patch_dom,pfscan_RRM_dom	-	no_errors	RBM10	HGNC	ENSG00000182872	tier1	-	-	55	0	0.00	7	52	88.14
RBP3	0	genome.wustl.edu	37	10	48388265	48388265	+	Silent	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	10	48388265	48388265	G	A	SNP	RBP3	ENST00000224600	human	ensembl	74_37	-1	known	silent	c.2613	p.P871	1.000	pfam_Interphotoreceptor_retinol-bd,smart_Interphotoreceptor_retinol-bd	pfam_Interphotoreceptor_retinol-bd,pfam_Interphotorcpt_retinol-bd_N,smart_Interphotoreceptor_retinol-bd	-	no_errors	RBP3	HGNC	ENSG00000107618	tier1	-	-	66	0	0.00	38	19	33.33
RELN	0	genome.wustl.edu	37	7	103141201	103141201	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	7	103141201	103141201	G	T	SNP	RELN	ENST00000424685	human	ensembl	74_37	-1	known	missense	c.8658	p.H2886Q	1.000	superfamily_Sialidases	pfam_EGF_extracell,pfam_Reeler_dom,pfam_BNR_rpt,superfamily_Sialidases,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Reeler_dom	-	no_errors	RELN	HGNC	ENSG00000189056	tier1	-	-	83	0	0.00	64	4	5.88
RGMB	0	genome.wustl.edu	37	5	98115457	98115457	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	5	98115457	98115457	G	T	SNP	RGMB	ENST00000308234	human	ensembl	74_37	+1	known	missense	c.433	p.V145L	1.000	pfam_RGM_N	pfam_RGM_C,pfam_RGM_N	-	no_errors	RGMB	HGNC	ENSG00000174136				48	0	0.00	29	2	6.45
RGPD3	0	genome.wustl.edu	37	2	107040103	107040103	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	2	107040103	107040103	T	G	SNP	RGPD3	ENST00000304514	human	ensembl	74_37	-1	known	missense	c.4320	p.K1440N	0.968	pfam_Ran_bind_dom,smart_Ran_bind_dom,pfscan_Ran_bind_dom	pfam_Ran_bind_dom,pfam_GRIP,pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,smart_Ran_bind_dom,smart_GRIP,pfscan_GRIP,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Ran_bind_dom	-	no_errors	RGPD3	HGNC	ENSG00000153165	tier1	-	-	47	0	0.00	81	53	39.55
RIF1	0	genome.wustl.edu	37	2	152319844	152319844	+	Silent	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	2	152319844	152319844	G	T	SNP	RIF1	ENST00000243326	human	ensembl	74_37	+1	known	silent	c.3810	p.G1270	0.000	NULL	pfam_Rif1_N,superfamily_ARM-type_fold	-	no_errors	RIF1	HGNC	ENSG00000080345				23	0	0.00	58	4	6.45
RNF24	0	genome.wustl.edu	37	20	3944539	3944539	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	20	3944539	3944539	G	T	SNP	RNF24	ENST00000432261	human	ensembl	74_37	-1	known	missense	c.189	p.F63L	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF24	HGNC	ENSG00000101236	tier1	-	-	52	0	0.00	54	4	6.90
RNH1	0	genome.wustl.edu	37	11	494990	494991	+	Frame_Shift_Ins	INS	-	-	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	11	494990	494991	-	T	INS	RNH1	ENST00000354420	human	ensembl	74_37	-1	known	frame_shift_ins	c.1191_1190	p.N397fs	0.002:0.006	smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Leu-rich_rpt_Cys-con_subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Leu-rich_rpt_Cys-con_subtyp	-	no_errors	RNH1	HGNC	ENSG00000023191	tier1			52	0	0.00	64	39	37.86
RPGRIP1	0	genome.wustl.edu	37	14	21790080	21790080	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	14	21790080	21790080	G	T	SNP	RPGRIP1	ENST00000206660	human	ensembl	74_37	+1	known	missense	c.1679	p.R560M	0.898	NULL	pfam_DUF3250,superfamily_C2_dom	-	no_errors	RPGRIP1	HGNC	ENSG00000092200				54	0	0.00	62	4	6.06
RPL7L1	0	genome.wustl.edu	37	6	42848666	42848666	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	6	42848666	42848666	G	A	SNP	RPL7L1	ENST00000304734	human	ensembl	74_37	+1	known	missense	c.82	p.A28T	1.000	pfam_Ribosomal_L30_N,tigrfam_Ribosomal_L7_euk	pfam_Ribosomal_L30_ferredoxin-like,pfam_Ribosomal_L30_N,superfamily_Ribosomal_L30_ferredoxin-like,tigrfam_Ribosomal_L7_euk	-	no_errors	RPL7L1	HGNC	ENSG00000146223	tier1	-	-	90	0	0.00	129	75	36.76
RS1	0	genome.wustl.edu	37	X	18665448	18665448	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	X	18665448	18665448	G	T	SNP	RS1	ENST00000379984	human	ensembl	74_37	-1	known	nonsense	c.189	p.C63*	1.000	smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	RS1	HGNC	ENSG00000102104				44	0	0.00	65	4	5.80
RSPH6A	0	genome.wustl.edu	37	19	46307822	46307822	+	Silent	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	19	46307822	46307822	G	T	SNP	RSPH6A	ENST00000221538	human	ensembl	74_37	-1	known	silent	c.1341	p.A447	0.038	pfam_Radial_spoke	pfam_Radial_spoke	-	no_errors	RSPH6A	HGNC	ENSG00000104941	tier1	-	-	77	0	0.00	61	4	6.15
RYR3	0	genome.wustl.edu	37	15	33831636	33831636	+	Silent	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	15	33831636	33831636	C	T	SNP	RYR3	ENST00000389232	human	ensembl	74_37	+1	known	silent	c.519	p.L173	0.219	pfam_Ins145_P3_rcpt,superfamily_MIR_motif,smart_MIR_motif,prints_Ryan_recept,pfscan_MIR_motif	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838	tier1	-	-	44	0	0.00	48	25	34.25
RYR3	0	genome.wustl.edu	37	15	33922180	33922180	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	15	33922180	33922180	G	T	SNP	RYR3	ENST00000389232	human	ensembl	74_37	+1	known	nonsense	c.2719	p.E907*	1.000	pfam_Ryanodine_rcpt	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838	tier1	-	-	37	0	0.00	62	4	6.06
SACS	0	genome.wustl.edu	37	13	23905608	23905608	+	Missense_Mutation	SNP	A	A	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	13	23905608	23905608	A	C	SNP	SACS	ENST00000382292	human	ensembl	74_37	-1	known	missense	c.12407	p.L4136R	1.000	NULL	pfam_HEPN,pfam_Ubiquitin_dom,superfamily_HATPase_ATP-bd,superfamily_DnaJ_domain,smart_HEPN,pfscan_HEPN,pfscan_DnaJ_domain,pfscan_Ubiquitin_supergroup	-	no_errors	SACS	HGNC	ENSG00000151835				9	0	0.00	42	4	8.70
SAMD4B	0	genome.wustl.edu	37	19	39860549	39860549	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	19	39860549	39860549	G	T	SNP	SAMD4B	ENST00000314471	human	ensembl	74_37	+1	known	nonsense	c.451	p.E151*	1.000	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM	-	no_errors	SAMD4B	HGNC	ENSG00000179134				57	0	0.00	58	4	6.45
SCN4B	0	genome.wustl.edu	37	11	118006825	118006826	+	RNA	INS	-	-	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	11	118006825	118006826	-	A	INS	SCN4B	ENST00000423160	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	SCN4B	HGNC	ENSG00000177098	tier1			13	0	0.00	2	2	50.00
SEC24A	0	genome.wustl.edu	37	5	134053838	134053838	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	5	134053838	134053838	G	T	SNP	SEC24A	ENST00000398844	human	ensembl	74_37	+1	known	missense	c.2945	p.G982V	1.000	pfam_Gelsolin_dom	pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Znf_Sec23_Sec24,pfam_Gelsolin_dom,superfamily_Sec23/24_helical_dom	-	no_errors	SEC24A	HGNC	ENSG00000113615				20	0	0.00	34	2	5.56
SETDB2	0	genome.wustl.edu	37	13	50062692	50062692	+	Missense_Mutation	SNP	C	C	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	13	50062692	50062692	C	G	SNP	SETDB2	ENST00000317257	human	ensembl	74_37	+1	known	missense	c.1879	p.L627V	0.000	pfam_SET_dom,smart_SET_dom,pfscan_SET_dom	pfam_SET_dom,pfam_Pre-SET_dom,pfam_Methyl_CpG_DNA-bd,superfamily_DNA-bd_dom,smart_Methyl_CpG_DNA-bd,smart_Pre-SET_Zn-bd_sub,smart_SET_dom,pfscan_Methyl_CpG_DNA-bd,pfscan_SET_dom,pfscan_Pre-SET_dom	-	no_errors	SETDB2	HGNC	ENSG00000136169	tier1	-	-	52	0	0.00	88	7	7.37
SETX	0	genome.wustl.edu	37	9	135158548	135158548	+	RNA	DEL	A	A	-			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	9	135158548	135158548	A	-	DEL	SETX	ENST00000474172	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.010	-	-	-	no_errors	SETX	HGNC	ENSG00000107290	tier1			27	0	0.00	72	6	7.69
SHB	0	genome.wustl.edu	37	9	38016031	38016031	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	9	38016031	38016031	T	G	SNP	SHB	ENST00000377707	human	ensembl	74_37	-1	known	missense	c.815	p.Y272S	1.000	NULL	pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2	-	no_errors	SHB	HGNC	ENSG00000107338	tier1	-	-	30	0	0.00	26	19	42.22
SIPA1L1	0	genome.wustl.edu	37	14	72117066	72117066	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	14	72117066	72117066	G	T	SNP	SIPA1L1	ENST00000555818	human	ensembl	74_37	+1	known	missense	c.1833	p.Q611H	1.000	pfscan_Rap_GAP_dom	pfam_DUF3401,pfam_Rap_GAP_dom,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1L1	HGNC	ENSG00000197555	tier1	-	-	30	0	0.00	27	4	12.90
SLC10A7	0	genome.wustl.edu	37	4	147179885	147179885	+	Missense_Mutation	SNP	A	A	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	4	147179885	147179885	A	C	SNP	SLC10A7	ENST00000394062	human	ensembl	74_37	-1	known	missense	c.952	p.L318V	0.565	pirsf_Put_Na-Bile_cotransptr	pfam_BilAc/Na_symport,pirsf_Put_Na-Bile_cotransptr	-	no_errors	SLC10A7	HGNC	ENSG00000120519	tier1	-	-	41	0	0.00	23	16	41.03
SLC22A18	0	genome.wustl.edu	37	11	2924637	2924637	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	11	2924637	2924637	G	T	SNP	SLC22A18	ENST00000312221	human	ensembl	74_37	+1	known	missense	c.62	p.G21V	0.009	superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,prints_Tet-R_TetA/multi-R_MdtG	-	no_errors	SLC22A18	HGNC	ENSG00000110628				70	0	0.00	47	4	7.84
SLC30A8	0	genome.wustl.edu	37	8	118170001	118170001	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	8	118170001	118170001	G	A	SNP	SLC30A8	ENST00000456015	human	ensembl	74_37	+1	known	missense	c.490	p.E164K	0.372	pfam_Cation_efflux,tigrfam_Cation_efflux	pfam_Cation_efflux,tigrfam_Cation_efflux	-	no_errors	SLC30A8	HGNC	ENSG00000164756	tier1	-	-	57	0	0.00	56	37	39.78
SLC45A4	0	genome.wustl.edu	37	8	142225916	142225916	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	8	142225916	142225916	G	C	SNP	SLC45A4	ENST00000517878	human	ensembl	74_37	-1	known	missense	c.1883	p.S628C	1.000	superfamily_MFS_dom_general_subst_transpt	superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC45A4	HGNC	ENSG00000022567	tier1	-	-	50	0	0.00	57	8	12.31
SLC4A2	0	genome.wustl.edu	37	7	150761424	150761424	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	7	150761424	150761424	G	T	SNP	SLC4A2	ENST00000413384	human	ensembl	74_37	+1	known	missense	c.187	p.G63C	1.000	NULL	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Anion_exchange,prints_Anion_exchange_2,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A2	HGNC	ENSG00000164889				24	0	0.00	14	2	12.50
SLC5A9	0	genome.wustl.edu	37	1	48713180	48713180	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	48713180	48713180	G	T	SNP	SLC5A9	ENST00000236495	human	ensembl	74_37	+1	known	missense	c.2086	p.A696S	0.823	NULL	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A9	HGNC	ENSG00000117834	tier1	-	-	52	0	0.00	60	4	6.25
SLC6A18	0	genome.wustl.edu	37	5	1242967	1242967	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	5	1242967	1242967	T	G	SNP	SLC6A18	ENST00000324642	human	ensembl	74_37	+1	known	missense	c.1120	p.F374V	1.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_orphan	-	no_errors	SLC6A18	HGNC	ENSG00000164363	tier1	-	-	57	0	0.00	81	22	21.36
SLC9A3	0	genome.wustl.edu	37	5	492104	492104	+	Silent	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	5	492104	492104	G	A	SNP	SLC9A3	ENST00000264938	human	ensembl	74_37	-1	known	silent	c.294	p.I98	0.970	pfam_Cation/H_exchanger,tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,superfamily_Reg_factor_effector_dom,prints_Na/H_exchanger_3/5,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A3	HGNC	ENSG00000066230	tier1	-	-	98	0	0.00	90	28	23.73
SLCO1B3	0	genome.wustl.edu	37	12	21015743	21015743	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	12	21015743	21015743	T	C	SNP	SLCO1B3	ENST00000553473	human	ensembl	74_37	+1	known	missense	c.682	p.S228P	0.995	pfam_OA_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO1B3	HGNC	ENSG00000111700	tier1	-	-	58	0	0.00	51	9	15.00
SLFN5	0	genome.wustl.edu	37	17	33586292	33586292	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	17	33586292	33586292	G	T	SNP	SLFN5	ENST00000299977	human	ensembl	74_37	+1	known	missense	c.583	p.V195F	0.844	pfam_ATPase_AAA-4	pfam_ATPase_AAA-4,pfam_DUF2075,superfamily_P-loop_NTPase	-	no_errors	SLFN5	HGNC	ENSG00000166750				19	0	0.00	39	4	9.30
SMARCC1	0	genome.wustl.edu	37	3	47677562	47677562	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	3	47677562	47677562	T	C	SNP	SMARCC1	ENST00000254480	human	ensembl	74_37	-1	known	missense	c.2441	p.K814R	0.976	NULL	pfam_SWIRM,pfam_SANT/Myb,superfamily_Homeodomain-like,superfamily_BRCT_dom,smart_Chromo_domain/shadow,smart_SANT/Myb,pfscan_SWIRM,pfscan_Myb-like_dom	-	no_errors	SMARCC1	HGNC	ENSG00000173473	tier1	-	-	36	0	0.00	53	43	44.79
SMYD1	0	genome.wustl.edu	37	2	88387421	88387421	+	Missense_Mutation	SNP	A	A	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	2	88387421	88387421	A	G	SNP	SMYD1	ENST00000419482	human	ensembl	74_37	+1	known	missense	c.355	p.T119A	1.000	pfam_SET_dom,smart_SET_dom	pfam_SET_dom,pfam_Znf_MYND,smart_SET_dom,pfscan_SET_dom,pfscan_Znf_MYND	-	no_errors	SMYD1	HGNC	ENSG00000115593				53	0	0.00	45	4	8.00
SNAP47	0	genome.wustl.edu	37	1	227935805	227935805	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	227935805	227935805	C	T	SNP	SNAP47	ENST00000366759	human	ensembl	74_37	+1	known	missense	c.503	p.T168M	0.806	NULL	pfscan_T_SNARE_dom	-	no_errors	SNAP47	HGNC	ENSG00000143740	tier1	-	-	54	0	0.00	57	4	6.56
SNORD116-17	0	genome.wustl.edu	37	15	25328742	25328742	+	RNA	SNP	T	T	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	15	25328742	25328742	T	C	SNP	SNORD116-17	ENST00000383929	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.994	-	-	-	no_errors	SNORD116-17	HGNC	ENSG00000206656	tier1	-	-	106	0	0.00	81	54	40.00
SPATA5L1	0	genome.wustl.edu	37	15	45713328	45713328	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	15	45713328	45713328	C	A	SNP	SPATA5L1	ENST00000305560	human	ensembl	74_37	+1	known	missense	c.2182	p.P728T	1.000	superfamily_P-loop_NTPase	pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	SPATA5L1	HGNC	ENSG00000171763	tier1	-	-	37	0	0.00	16	45	73.77
SPEF2	0	genome.wustl.edu	37	5	35641562	35641562	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	5	35641562	35641562	C	A	SNP	SPEF2	ENST00000356031	human	ensembl	74_37	+1	known	missense	c.191	p.S64Y	1.000	pfam_DUF1042,superfamily_CH-domain,pfscan_CH-domain	pfam_DUF1042,pfam_Adenylate_kin,pfam_HATC_dom_C,superfamily_P-loop_NTPase,superfamily_CH-domain,pfscan_CH-domain	-	no_errors	SPEF2	HGNC	ENSG00000152582	tier1	-	-	63	0	0.00	123	36	22.64
STAB1	0	genome.wustl.edu	37	3	52556178	52556178	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	3	52556178	52556178	C	T	SNP	STAB1	ENST00000321725	human	ensembl	74_37	+1	known	missense	c.6397	p.R2133C	0.206	pfscan_EG-like_dom	pfam_FAS1_domain,pfam_Link,superfamily_C-type_lectin_fold,superfamily_FAS1_domain,smart_EG-like_dom,smart_EGF_laminin,smart_FAS1_domain,smart_EGF-like_Ca-bd_dom,smart_Link,pfscan_EG-like_dom,pfscan_FAS1_domain,pfscan_Link	-	no_errors	STAB1	HGNC	ENSG00000010327	tier1	-	-	65	0	0.00	125	7	5.30
SYDE2	0	genome.wustl.edu	37	1	85648574	85648574	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	85648574	85648574	G	T	SNP	SYDE2	ENST00000341460	human	ensembl	74_37	-1	known	missense	c.1751	p.A584D	1.000	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	SYDE2	HGNC	ENSG00000097096				40	0	0.00	52	3	5.45
TACC2	0	genome.wustl.edu	37	10	123971221	123971221	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	10	123971221	123971221	G	T	SNP	TACC2	ENST00000334433	human	ensembl	74_37	+1	known	missense	c.7281	p.K2427N	1.000	NULL	pfam_TACC	-	no_errors	TACC2	HGNC	ENSG00000138162				69	0	0.00	76	4	5.00
TBC1D1	0	genome.wustl.edu	37	4	38138900	38138900	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	4	38138900	38138900	G	A	SNP	TBC1D1	ENST00000261439	human	ensembl	74_37	+1	known	missense	c.3451	p.A1151T	0.000	NULL	pfam_Rab-GTPase-TBC_dom,pfam_DUF3350,pfam_PTB/PI_dom,superfamily_Rab-GTPase-TBC_dom,smart_PTB/PI_dom,smart_Rab-GTPase-TBC_dom,pfscan_PTB/PI_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D1	HGNC	ENSG00000065882				29	0	0.00	28	3	9.68
TBC1D8	0	genome.wustl.edu	37	2	101654015	101654015	+	Silent	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	2	101654015	101654015	G	A	SNP	TBC1D8	ENST00000409318	human	ensembl	74_37	-1	known	silent	c.1431	p.S477	0.140	NULL	pfam_Rab-GTPase-TBC_dom,pfam_GRAM,superfamily_Rab-GTPase-TBC_dom,smart_GRAM,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D8	HGNC	ENSG00000204634				60	0	0.00	61	5	7.58
TBR1	0	genome.wustl.edu	37	2	162280635	162280635	+	Missense_Mutation	SNP	A	A	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	2	162280635	162280635	A	G	SNP	TBR1	ENST00000389554	human	ensembl	74_37	+1	known	missense	c.1946	p.E649G	1.000	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBR1	HGNC	ENSG00000136535	tier1	-	-	60	0	0.00	45	35	43.75
TCEB3CL2	0	genome.wustl.edu	37	18	44543316	44543316	+	Silent	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	18	44543316	44543316	G	A	SNP	TCEB3CL2	ENST00000591973	human	ensembl	74_37	-1	known	silent	c.1056	p.L352	0.001	pfam_RNA_pol_II_trans_fac_SIII_A	pfam_RNA_pol_II_trans_fac_SIII_A,pfam_TFIIS_N,superfamily_TFIIS_N,smart_TFIIS/CRSP70_N_sub	-	no_errors	TCEB3CL2	HGNC	ENSG00000266996	tier1	-	-	98	0	0.00	19	19	50.00
TEAD3	0	genome.wustl.edu	37	6	35443840	35443840	+	Silent	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	6	35443840	35443840	G	T	SNP	TEAD3	ENST00000402886	human	ensembl	74_37	-1	novel	silent	c.576	p.G192	1.000	pfam_TEA/ATTS,pirsf_TEF	pfam_TEA/ATTS,pirsf_TEF	-	no_errors	TEAD3	HGNC	ENSG00000007866				57	0	0.00	74	5	6.33
TESK2	0	genome.wustl.edu	37	1	45809610	45809610	+	RNA	DEL	A	A	-			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	45809610	45809610	A	-	DEL	TESK2	ENST00000486676	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.794	-	-	-	no_errors	TESK2	HGNC	ENSG00000070759	tier1			31	0	0.00	66	13	16.46
THADA	0	genome.wustl.edu	37	2	43519252	43519252	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	2	43519252	43519252	G	T	SNP	THADA	ENST00000405006	human	ensembl	74_37	-1	known	missense	c.4928	p.S1643Y	1.000	superfamily_ARM-type_fold	pfam_DUF2428_death-receptor-like,superfamily_ARM-type_fold	-	no_errors	THADA	HGNC	ENSG00000115970				23	0	0.00	57	4	6.56
TMEM131	0	genome.wustl.edu	37	2	98377144	98377144	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	2	98377144	98377144	C	A	SNP	TMEM131	ENST00000186436	human	ensembl	74_37	-1	known	missense	c.5020	p.G1674C	1.000	NULL	pfam_DUF3651_TMEM131	-	no_errors	TMEM131	HGNC	ENSG00000075568				47	0	0.00	71	4	5.33
TMEM145	0	genome.wustl.edu	37	19	42821921	42821921	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	19	42821921	42821921	G	T	SNP	TMEM145	ENST00000301204	human	ensembl	74_37	+1	known	nonsense	c.961	p.G321*	1.000	pfam_Intimal_thickness-rel_rcpt	pfam_Intimal_thickness-rel_rcpt	-	no_errors	TMEM145	HGNC	ENSG00000167619				65	0	0.00	49	3	5.77
TMEM225	0	genome.wustl.edu	37	11	123755245	123755245	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	11	123755245	123755245	G	T	SNP	TMEM225	ENST00000375026	human	ensembl	74_37	-1	known	missense	c.280	p.Q94K	0.155	NULL	NULL	-	no_errors	TMEM225	HGNC	ENSG00000204300				43	0	0.00	34	3	8.11
TMEM55B	0	genome.wustl.edu	37	14	20927414	20927414	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	14	20927414	20927414	C	T	SNP	TMEM55B	ENST00000398020	human	ensembl	74_37	-1	known	missense	c.662	p.C221Y	1.000	pfam_Transmembrane_protein_55A/B	pfam_Transmembrane_protein_55A/B	-	no_errors	TMEM55B	HGNC	ENSG00000165782				37	0	0.00	44	3	6.38
TMEM97	0	genome.wustl.edu	37	17	26653806	26653807	+	Frame_Shift_Ins	INS	-	-	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	17	26653806	26653807	0	A	INS	TMEM97	ENST00000226230	human	ensembl	74_37	+1	known	frame_shift_ins	c.518_519	p.K177fs	1.000:1.000	NULL	pfam_Transmembrane_6/97,pirsf_Transmembrane_6/97	-	no_errors	TMEM97	HGNC	ENSG00000109084				15	0	0.00	72	6	7.69
TNFRSF11A	0	genome.wustl.edu	37	18	60035976	60035976	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	18	60035976	60035976	T	C	SNP	TNFRSF11A	ENST00000586569	human	ensembl	74_37	+1	known	missense	c.826	p.F276L	0.000	NULL	pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg,prints_TNFR_11A,prints_TNFR_11	-	no_errors	TNFRSF11A	HGNC	ENSG00000141655	tier1	-	-	19	0	0.00	16	4	19.05
TNFSF15	0	genome.wustl.edu	37	9	117568161	117568161	+	Silent	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	9	117568161	117568161	G	T	SNP	TNFSF15	ENST00000374045	human	ensembl	74_37	-1	known	silent	c.132	p.L44	0.001	NULL	pfam_TNF_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_TNF_dom,pfscan_TNF_dom,prints_TNF	-	no_errors	TNFSF15	HGNC	ENSG00000181634				58	0	0.00	57	4	6.56
TP53	0	genome.wustl.edu	37	17	7577121	7577121	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	17	7577121	7577121	G	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.817	p.R273C	0.830	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	rs121913343	-	29	0	0.00	5	24	82.76
TP53TG1	0	genome.wustl.edu	37	7	86974668	86974668	+	RNA	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	7	86974668	86974668	G	T	SNP	TP53TG1	ENST00000359941	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TP53TG1	HGNC	ENSG00000182165	tier1	-	-	73	0	0.00	72	8	10.00
TPTE	0	genome.wustl.edu	37	21	10906741	10906741	+	RNA	SNP	T	T	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	21	10906741	10906741	T	G	SNP	TPTE	ENST00000415664	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.085	-	-	-	no_errors	TPTE	HGNC	ENSG00000166157	tier1	rs3742162	-	16	0	0.00	19	21	52.50
TREX1	0	genome.wustl.edu	37	3	48508479	48508479	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	3	48508479	48508479	G	T	SNP	TREX1	ENST00000422277	human	ensembl	74_37	+1	known	missense	c.590	p.G197V	0.989	superfamily_RNaseH-like_dom,smart_Exonuclease	superfamily_RNaseH-like_dom,smart_Exonuclease	-	no_errors	TREX1	HGNC	ENSG00000213689				16	0	0.00	33	4	10.81
TRIM49B	0	genome.wustl.edu	37	11	49059149	49059149	+	Missense_Mutation	SNP	A	A	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	11	49059149	49059149	A	C	SNP	TRIM49B	ENST00000332682	human	ensembl	74_37	+1	known	missense	c.979	p.S327R	0.000	superfamily_ConA-like_lec_gl_sf,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_SPRY_rcpt,pfam_Znf_B-box,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM49B	HGNC	ENSG00000182053	tier1	-	-	117	0	0.00	169	95	35.98
TRPM3	0	genome.wustl.edu	37	9	73152282	73152282	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	9	73152282	73152282	C	A	SNP	TRPM3	ENST00000423814	human	ensembl	74_37	-1	known	missense	c.3792	p.E1264D	1.000	NULL	pfam_Ion_trans_dom	-	no_errors	TRPM3	HGNC	ENSG00000083067				60	0	0.00	54	3	5.26
TSLP	0	genome.wustl.edu	37	5	110411739	110411739	+	Silent	SNP	T	T	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	5	110411739	110411739	T	G	SNP	TSLP	ENST00000344895	human	ensembl	74_37	+1	known	silent	c.447	p.R149	0.000	NULL	NULL	-	no_errors	TSLP	HGNC	ENSG00000145777	tier1	-	-	14	0	0.00	11	43	79.63
TTC37	0	genome.wustl.edu	37	5	94820496	94820496	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	5	94820496	94820496	G	T	SNP	TTC37	ENST00000358746	human	ensembl	74_37	-1	known	missense	c.3985	p.L1329I	0.976	NULL	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC37	HGNC	ENSG00000198677	tier1	-	-	39	0	0.00	41	4	8.89
TTN	0	genome.wustl.edu	37	2	179407890	179407890	+	Silent	SNP	A	A	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	2	179407890	179407890	A	G	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	silent	c.89106	p.G29702	0.401	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	43	0	0.00	41	17	29.31
TTN	0	genome.wustl.edu	37	2	179583141	179583141	+	Missense_Mutation	SNP	A	A	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	2	179583141	179583141	A	C	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.20960	p.L6987R	0.040	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	24	0	0.00	22	10	31.25
TUBA3C	0	genome.wustl.edu	37	13	19748208	19748208	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	13	19748208	19748208	G	A	SNP	TUBA3C	ENST00000400113	human	ensembl	74_37	-1	known	missense	c.1148	p.A383V	1.000	pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tub_FtsZ_C,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Tubulin,prints_Delta_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin,prints_Beta_tubulin	-	no_errors	TUBA3C	HGNC	ENSG00000198033	tier1	-	-	90	0	0.00	92	17	15.60
UBR1	0	genome.wustl.edu	37	15	43294822	43294822	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	15	43294822	43294822	C	A	SNP	UBR1	ENST00000290650	human	ensembl	74_37	-1	known	missense	c.3590	p.C1197F	1.000	NULL	pfam_ClpS_core,pfam_Znf_N-recognin,superfamily_Ribosomal_L7/12_C/ClpS-like,smart_Znf_N-recognin_met,pfscan_Znf_N-recognin	-	no_errors	UBR1	HGNC	ENSG00000159459	tier1	-	-	37	0	0.00	63	4	5.97
UGGT1	0	genome.wustl.edu	37	2	128878801	128878801	+	Missense_Mutation	SNP	C	C	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	2	128878801	128878801	C	G	SNP	UGGT1	ENST00000259253	human	ensembl	74_37	+1	known	missense	c.1002	p.I334M	1.000	NULL	pfam_UDP-g_GGtrans	-	no_errors	UGGT1	HGNC	ENSG00000136731	tier1	-	-	27	0	0.00	37	38	50.67
UNC13C	0	genome.wustl.edu	37	15	54590124	54590124	+	Silent	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	15	54590124	54590124	G	A	SNP	UNC13C	ENST00000260323	human	ensembl	74_37	+1	known	silent	c.4104	p.E1368	1.000	superfamily_C2_dom	pfam_Munc13_subgr_dom-2,pfam_Ca-dep_secretion_activator,pfam_C2_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_C2_dom,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_C2_dom	-	no_errors	UNC13C	HGNC	ENSG00000137766				20	0	0.00	20	12	36.36
USP8	0	genome.wustl.edu	37	15	50785016	50785016	+	Missense_Mutation	SNP	A	A	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	15	50785016	50785016	A	G	SNP	USP8	ENST00000307179	human	ensembl	74_37	+1	known	missense	c.2353	p.T785A	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_USP8_dimer,pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,superfamily_WW_dom,pfscan_Rhodanese-like_dom,pfscan_Peptidase_C19/C67	-	no_errors	USP8	HGNC	ENSG00000138592				25	0	0.00	35	6	14.63
USP9Y	0	genome.wustl.edu	37	Y	14954277	14954277	+	Silent	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	Y	14954277	14954277	C	T	SNP	USP9Y	ENST00000338981	human	ensembl	74_37	+1	known	silent	c.6324	p.C2108	1.000	NULL	pfam_Peptidase_C19/C67,superfamily_ARM-type_fold,superfamily_Glycoside_hydrolase_SF,pfscan_Peptidase_C19/C67	-	no_errors	USP9Y	HGNC	ENSG00000114374	tier1	-	-	25	0	0.00	18	3	14.29
UTP23	0	genome.wustl.edu	37	8	117798811	117798811	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	8	117798811	117798811	G	T	SNP	UTP23	ENST00000357148	human	ensembl	74_37	+1	known	missense	c.433	p.G145C	0.055	NULL	pfam_Fcf1/Utp23	-	no_errors	UTP23	HGNC	ENSG00000147679	tier1	-	-	46	0	0.00	69	4	5.48
UTRN	0	genome.wustl.edu	37	6	145079167	145079167	+	RNA	SNP	A	A	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	6	145079167	145079167	A	G	SNP	UTRN	ENST00000480333	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	UTRN	HGNC	ENSG00000152818	tier1	-	-	28	0	0.00	9	19	67.86
WBSCR17	0	genome.wustl.edu	37	7	70597949	70597949	+	Missense_Mutation	SNP	A	A	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	7	70597949	70597949	A	G	SNP	WBSCR17	ENST00000333538	human	ensembl	74_37	+1	known	missense	c.161	p.H54R	1.000	NULL	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	WBSCR17	HGNC	ENSG00000185274	tier1	-	-	26	0	0.00	3	9	75.00
WBSCR17	0	genome.wustl.edu	37	7	70886066	70886066	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	7	70886066	70886066	G	A	SNP	WBSCR17	ENST00000333538	human	ensembl	74_37	+1	known	missense	c.937	p.A313T	1.000	NULL	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	WBSCR17	HGNC	ENSG00000185274				70	0	0.00	34	2	5.41
WDR55	0	genome.wustl.edu	37	5	140047990	140047990	+	Frame_Shift_Del	DEL	T	T	-			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	5	140047990	140047990	T	-	DEL	WDR55	ENST00000506393	human	ensembl	74_37	+1	known	frame_shift_del	c.363	p.Q124fs	0.101	NULL	NULL	-	no_errors	WDR55	HGNC	ENSG00000120314	tier1			37	0	0.00	35	2	5.41
WWP1	0	genome.wustl.edu	37	8	87473462	87473462	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	8	87473462	87473462	G	T	SNP	WWP1	ENST00000265428	human	ensembl	74_37	+1	known	nonsense	c.2509	p.E837*	1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_C2_dom,superfamily_WW_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom	-	no_errors	WWP1	HGNC	ENSG00000123124				26	0	0.00	57	3	5.00
XDH	0	genome.wustl.edu	37	2	31560560	31560560	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	2	31560560	31560560	G	A	SNP	XDH	ENST00000379416	human	ensembl	74_37	-1	known	missense	c.3898	p.P1300S	1.000	superfamily_AldOxase/xan_DH_Mopterin-bd,pirsf_Ald_Oxase/xanthine_DH	pfam_AldOxase/xan_DH_Mopterin-bd,pfam_Mopterin_DH_FAD-bd,pfam_Ald_Oxase/Xan_DH_a/b,pfam_2Fe-2S-bd,pfam_CO_DH_flav_C,pfam_2Fe-2S_ferredoxin-type,superfamily_AldOxase/xan_DH_Mopterin-bd,superfamily_FAD-bd_2,superfamily_Ald_Oxase/Xan_DH_a/b,superfamily_2Fe-2S-bd,superfamily_CO_DH_flav_C,superfamily_2Fe-2S_ferredoxin-type,pirsf_Ald_Oxase/xanthine_DH,pfscan_2Fe-2S_ferredoxin-type,tigrfam_Xanthine_DH_ssu	-	no_errors	XDH	HGNC	ENSG00000158125				53	0	0.00	57	3	5.00
YTHDC1	0	genome.wustl.edu	37	4	69198527	69198527	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	4	69198527	69198527	G	T	SNP	YTHDC1	ENST00000344157	human	ensembl	74_37	-1	known	missense	c.1012	p.R338S	1.000	NULL	pfam_YTH_domain,pfscan_YTH_domain	-	no_errors	YTHDC1	HGNC	ENSG00000083896				33	0	0.00	56	3	5.08
YWHAZ	0	genome.wustl.edu	37	8	101936481	101936481	+	Missense_Mutation	SNP	A	A	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	8	101936481	101936481	A	G	SNP	YWHAZ	ENST00000353245	human	ensembl	74_37	-1	known	missense	c.464	p.I155T	1.000	pfam_14-3-3_domain,superfamily_14-3-3_domain,smart_14-3-3_domain,pirsf_14-3-3,prints_14-3-3	pfam_14-3-3_domain,superfamily_14-3-3_domain,smart_14-3-3_domain,pirsf_14-3-3,prints_14-3-3	-	no_errors	YWHAZ	HGNC	ENSG00000164924	tier1	-	-	26	0	0.00	61	20	24.69
ZBTB1	0	genome.wustl.edu	37	14	64988318	64988318	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	14	64988318	64988318	C	A	SNP	ZBTB1	ENST00000394712	human	ensembl	74_37	+1	known	missense	c.96	p.D32E	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB1	HGNC	ENSG00000126804	tier1	-	-	25	0	0.00	29	4	12.12
ZC3H12C	0	genome.wustl.edu	37	11	110007878	110007878	+	Missense_Mutation	SNP	A	A	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	11	110007878	110007878	A	C	SNP	ZC3H12C	ENST00000278590	human	ensembl	74_37	+1	known	missense	c.512	p.K171T	1.000	NULL	pfam_RNase_Zc3h12	-	no_errors	ZC3H12C	HGNC	ENSG00000149289	tier1	-	-	31	0	0.00	10	20	66.67
ZCCHC16	0	genome.wustl.edu	37	X	111698082	111698082	+	Silent	SNP	A	A	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	X	111698082	111698082	A	G	SNP	ZCCHC16	ENST00000340433	human	ensembl	74_37	+1	known	silent	c.126	p.Q42	0.001	NULL	superfamily_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC16	HGNC	ENSG00000187823	tier1	-	-	21	0	0.00	10	23	69.70
ZFHX3	0	genome.wustl.edu	37	16	73092841	73092843	+	RNA	DEL	GGA	GGA	-			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	GGA	GGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	16	73092841	73092843	GGA	-	DEL	ZFHX3	ENST00000558842	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000:1.000:1.000	-	-	-	no_errors	ZFHX3	HGNC	ENSG00000140836	tier1			11	0	0.00	2	2	50.00
ZFP2	0	genome.wustl.edu	37	5	178359431	178359431	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	5	178359431	178359431	C	A	SNP	ZFP2	ENST00000361362	human	ensembl	74_37	+1	known	missense	c.1117	p.Q373K	0.997	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFP2	HGNC	ENSG00000198939	tier1	-	-	38	0	0.00	51	4	7.27
ZMYM4	0	genome.wustl.edu	37	1	35859302	35859302	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	1	35859302	35859302	C	T	SNP	ZMYM4	ENST00000314607	human	ensembl	74_37	+1	known	missense	c.2873	p.S958F	0.988	NULL	pfam_DUF3504,pfam_Znf_MYM,smart_TRASH_dom	-	no_errors	ZMYM4	HGNC	ENSG00000146463	tier1	-	-	49	0	0.00	65	48	42.48
ZNF257	0	genome.wustl.edu	37	19	22270892	22270892	+	Silent	SNP	A	A	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	19	22270892	22270892	A	C	SNP	ZNF257	ENST00000594947	human	ensembl	74_37	+1	known	silent	c.340	p.R114	0.005	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF257	HGNC	ENSG00000197134	tier1	-	-	62	0	0.00	12	60	82.19
ZNF271	0	genome.wustl.edu	37	18	32887284	32887284	+	RNA	SNP	C	C	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	18	32887284	32887284	C	T	SNP	ZNF271	ENST00000399070	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.086	-	-	-	no_errors	ZNF271	HGNC	ENSG00000257267	tier1	-	-	33	0	0.00	12	23	65.71
ZNF287	0	genome.wustl.edu	37	17	16456371	16456371	+	Missense_Mutation	SNP	A	A	C			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	17	16456371	16456371	A	C	SNP	ZNF287	ENST00000395824	human	ensembl	74_37	-1	known	missense	c.1085	p.L362R	0.914	NULL	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF287	HGNC	ENSG00000141040	tier1	-	-	22	0	0.00	8	18	69.23
ZNF425	0	genome.wustl.edu	37	7	148809229	148809229	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	7	148809229	148809229	C	A	SNP	ZNF425	ENST00000378061	human	ensembl	74_37	-1	known	missense	c.304	p.D102Y	0.030	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	ZNF425	HGNC	ENSG00000204947	tier1	-	-	32	0	0.00	47	4	7.84
ZNF536	0	genome.wustl.edu	37	19	30935745	30935745	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	19	30935745	30935745	C	A	SNP	ZNF536	ENST00000355537	human	ensembl	74_37	+1	known	missense	c.1276	p.L426M	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF536	HGNC	ENSG00000198597	tier1	-	-	51	0	0.00	58	4	6.45
ZNF624	0	genome.wustl.edu	37	17	16525650	16525650	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	17	16525650	16525650	G	T	SNP	ZNF624	ENST00000311331	human	ensembl	74_37	-1	known	missense	c.2550	p.S850R	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF624	HGNC	ENSG00000197566				35	0	0.00	49	3	5.77
ZNF676	0	genome.wustl.edu	37	19	22363736	22363736	+	Silent	SNP	T	T	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	19	22363736	22363736	T	A	SNP	ZNF676	ENST00000397121	human	ensembl	74_37	-1	known	silent	c.783	p.G261	0.028	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF676	HGNC	ENSG00000196109	tier1	-	-	28	0	0.00	33	5	13.16
ZNF676	0	genome.wustl.edu	37	19	22363737	22363737	+	Missense_Mutation	SNP	C	C	G			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	19	22363737	22363737	C	G	SNP	ZNF676	ENST00000397121	human	ensembl	74_37	-1	known	missense	c.782	p.G261A	0.018	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF676	HGNC	ENSG00000196109	tier1	-	-	28	0	0.00	33	5	13.16
ZNF676	0	genome.wustl.edu	37	19	22363727	22363727	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	19	22363727	22363727	G	T	SNP	ZNF676	ENST00000397121	human	ensembl	74_37	-1	known	missense	c.792	p.S264R	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF676	HGNC	ENSG00000196109				29	0	0.00	29	2	6.45
ZNF682	0	genome.wustl.edu	37	19	20135200	20135200	+	Frame_Shift_Del	DEL	A	A	-			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	19	20135200	20135200	A	-	DEL	ZNF682	ENST00000597972	human	ensembl	74_37	-1	putative	frame_shift_del	c.7	p.C3fs	0.362	superfamily_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF682	HGNC	ENSG00000197124	tier1			24	0	0.00	23	2	8.00
ZSCAN23	0	genome.wustl.edu	37	6	28402405	28402405	+	Missense_Mutation	SNP	T	T	A			TCGA-JY-A6FH-01A-11D-A33E-09	TCGA-JY-A6FH-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a39b1d4-93ab-4208-9e29-10a436923ba6	e5e357da-c78e-466e-b581-75c3ff015527	6	28402405	28402405	T	A	SNP	ZSCAN23	ENST00000289788	human	ensembl	74_37	-1	known	missense	c.1007	p.N336I	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN23	HGNC	ENSG00000187987	tier1	-	-	40	0	0.00	32	27	45.76
