Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
AAK1	0	genome.wustl.edu	37	2	69732760	69732760	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	2	69732760	69732760	G	T	SNP	AAK1	ENST00000409085	human	ensembl	74_37	-1	known	missense	c.2210	p.P737Q	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	AAK1	HGNC	ENSG00000115977	tier1	-	-	75	0	0.00	39	10	20.41
ACTL6A	0	genome.wustl.edu	37	3	179305771	179305771	+	Silent	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	3	179305771	179305771	G	A	SNP	ACTL6A	ENST00000429709	human	ensembl	74_37	+1	known	silent	c.1263	p.K421	1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTL6A	HGNC	ENSG00000136518	tier1	-	-	39	0	0.00	16	14	46.67
ADAM6	0	genome.wustl.edu	37	14	106436793	106436793	+	RNA	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	14	106436793	106436793	C	T	SNP	ADAM6	ENST00000452053	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ADAM6	HGNC	ENSG00000233988	tier1	-	-	20	0	0.00	7	5	41.67
ADGB	0	genome.wustl.edu	37	6	147042619	147042619	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	6	147042619	147042619	G	T	SNP	ADGB	ENST00000397944	human	ensembl	74_37	+1	known	missense	c.2073	p.L691F	1.000	NULL	pfam_Peptidase_C2_calpain_cat,superfamily_Globin-like,smart_Peptidase_C2_calpain_cat,pfscan_IQ_motif_EF-hand-BS,pfscan_Peptidase_C2_calpain_cat	-	no_errors	ADGB	HGNC	ENSG00000118492	tier1	-	-	66	0	0.00	31	21	40.38
AFF2	0	genome.wustl.edu	37	X	147891443	147891443	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	X	147891443	147891443	G	A	SNP	AFF2	ENST00000370460	human	ensembl	74_37	+1	known	missense	c.1085	p.R362Q	1.000	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF2	HGNC	ENSG00000155966	tier1	-	-	63	0	0.00	10	47	82.46
AGRN	0	genome.wustl.edu	37	1	981861	981861	+	Frame_Shift_Del	DEL	C	C	-			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	1	981861	981861	C	-	DEL	AGRN	ENST00000379370	human	ensembl	74_37	+1	known	frame_shift_del	c.2996	p.G1002fs	0.000	NULL	pfam_Laminin_G,pfam_Agrin_NtA,pfam_Kazal_dom,pfam_EGF_laminin,pfam_SEA_dom,pfam_EG-like_dom,superfamily_TIMP-like_OB-fold,superfamily_ConA-like_lec_gl_sf,smart_FacI_MAC,smart_Fol_N,smart_Kazal_dom,smart_EG-like_dom,smart_EGF_laminin,smart_SEA_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Agrin_NtA,pfscan_SEA_dom	-	no_errors	AGRN	HGNC	ENSG00000188157	tier1			68	0	0.00	27	2	6.90
AHDC1	0	genome.wustl.edu	37	1	27877292	27877292	+	Silent	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	1	27877292	27877292	C	T	SNP	AHDC1	ENST00000247087	human	ensembl	74_37	-1	known	silent	c.1335	p.P445	0.819	NULL	NULL	-	no_errors	AHDC1	HGNC	ENSG00000126705	tier1	-	-	12	0	0.00	7	4	36.36
AK2	0	genome.wustl.edu	37	1	33476313	33476313	+	RNA	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	1	33476313	33476313	C	T	SNP	AK2	ENST00000491241	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.095	-	-	-	no_errors	AK2	HGNC	ENSG00000004455	tier1	-	-	112	0	0.00	54	13	19.40
AKR1A1	0	genome.wustl.edu	37	1	46034257	46034257	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	1	46034257	46034257	G	A	SNP	AKR1A1	ENST00000351829	human	ensembl	74_37	+1	known	missense	c.653	p.R218H	0.999	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_Aldo/keto_reductase_subgr	-	no_errors	AKR1A1	HGNC	ENSG00000117448				69	0	0.00	36	2	5.13
ARHGAP32	0	genome.wustl.edu	37	11	128839636	128839636	+	Missense_Mutation	SNP	C	C	G			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	11	128839636	128839636	C	G	SNP	ARHGAP32	ENST00000310343	human	ensembl	74_37	-1	known	missense	c.5430	p.K1810N	1.000	NULL	pfam_RhoGAP_dom,pfam_SH3_domain,pfam_SH3_2,pfam_Phox,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_Phox,smart_SH3_domain,smart_RhoGAP_dom,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	ARHGAP32	HGNC	ENSG00000134909	tier1	-	-	68	0	0.00	23	24	51.06
ARHGAP32	0	genome.wustl.edu	37	11	128843257	128843257	+	Silent	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	11	128843257	128843257	C	T	SNP	ARHGAP32	ENST00000310343	human	ensembl	74_37	-1	known	silent	c.3102	p.P1034	1.000	NULL	pfam_RhoGAP_dom,pfam_SH3_domain,pfam_SH3_2,pfam_Phox,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_Phox,smart_SH3_domain,smart_RhoGAP_dom,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	ARHGAP32	HGNC	ENSG00000134909	tier1	-	-	75	0	0.00	41	19	31.67
ARHGAP32	0	genome.wustl.edu	37	11	128910853	128910853	+	Nonsense_Mutation	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	11	128910853	128910853	G	A	SNP	ARHGAP32	ENST00000310343	human	ensembl	74_37	-1	known	nonsense	c.973	p.Q325*	1.000	superfamily_SH3_domain	pfam_RhoGAP_dom,pfam_SH3_domain,pfam_SH3_2,pfam_Phox,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_Phox,smart_SH3_domain,smart_RhoGAP_dom,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	ARHGAP32	HGNC	ENSG00000134909	tier1	-	-	58	0	0.00	34	11	24.44
ARHGAP39	0	genome.wustl.edu	37	8	145773258	145773258	+	Silent	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	8	145773258	145773258	C	T	SNP	ARHGAP39	ENST00000377307	human	ensembl	74_37	-1	known	silent	c.1212	p.A404	0.029	NULL	pfam_RhoGAP_dom,pfam_MyTH4_dom,superfamily_Rho_GTPase_activation_prot,superfamily_WW_dom,smart_WW_dom,smart_MyTH4_dom,smart_RhoGAP_dom,pfscan_MyTH4_dom,pfscan_WW_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP39	HGNC	ENSG00000147799				10	0	0.00	12	5	29.41
ARHGEF10L	0	genome.wustl.edu	37	1	17975067	17975067	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	1	17975067	17975067	G	A	SNP	ARHGEF10L	ENST00000361221	human	ensembl	74_37	+1	known	missense	c.2291	p.G764D	1.000	NULL	pfam_DH-domain,superfamily_DH-domain,superfamily_WD40_repeat_dom,smart_DH-domain,pfscan_DH-domain	-	no_errors	ARHGEF10L	HGNC	ENSG00000074964	tier1	-	-	54	0	0.00	27	4	12.90
ARHGEF19	0	genome.wustl.edu	37	1	16534232	16534232	+	Silent	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	1	16534232	16534232	G	A	SNP	ARHGEF19	ENST00000270747	human	ensembl	74_37	-1	known	silent	c.735	p.S245	0.004	NULL	pfam_DH-domain,pfam_SH3_domain,pfam_SH3_2,superfamily_DH-domain,superfamily_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	ARHGEF19	HGNC	ENSG00000142632	tier1	-	-	74	0	0.00	35	4	10.26
ARID4B	0	genome.wustl.edu	37	1	235424033	235424033	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	1	235424033	235424033	G	C	SNP	ARID4B	ENST00000264183	human	ensembl	74_37	-1	known	missense	c.41	p.T14S	1.000	NULL	pfam_RBB1NT,pfam_ARID/BRIGHT_DNA-bd,pfam_Tudor-knot,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Chromodomain-like,smart_Tudor,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID4B	HGNC	ENSG00000054267	tier1	-	-	86	0	0.00	37	19	33.93
ARPP21	0	genome.wustl.edu	37	3	35770848	35770848	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	3	35770848	35770848	C	T	SNP	ARPP21	ENST00000417925	human	ensembl	74_37	+1	known	missense	c.1177	p.P393S	0.943	NULL	pfam_R3H_ss-bd,smart_R3H_ss-bd,pfscan_R3H_ss-bd	-	no_errors	ARPP21	HGNC	ENSG00000172995				43	0	0.00	33	2	5.71
ASPRV1	0	genome.wustl.edu	37	2	70187813	70187813	+	Silent	SNP	T	T	C			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	2	70187813	70187813	T	C	SNP	ASPRV1	ENST00000320256	human	ensembl	74_37	-1	known	silent	c.1008	p.E336	0.000	NULL	pfam_Peptidase_aspartic_DDI1-type,pfam_Pept_A2A_retrovirus_sg,superfamily_Peptidase_aspartic_dom,pfscan_Peptidase_A2_cat	-	no_errors	ASPRV1	HGNC	ENSG00000244617	tier1	-	-	73	0	0.00	74	4	5.13
ATG4B	0	genome.wustl.edu	37	2	242590455	242590455	+	Missense_Mutation	SNP	C	C	G			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	2	242590455	242590455	C	G	SNP	ATG4B	ENST00000404914	human	ensembl	74_37	+1	known	missense	c.41	p.A14G	0.997	NULL	pfam_Peptidase_C54	-	no_errors	ATG4B	HGNC	ENSG00000168397	tier1	-	-	54	0	0.00	12	13	52.00
ATP10D	0	genome.wustl.edu	37	4	47525174	47525174	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	4	47525174	47525174	G	T	SNP	ATP10D	ENST00000273859	human	ensembl	74_37	+1	known	missense	c.631	p.G211C	0.998	pfam_ATPase_P-typ_transduc_dom_A,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10D	HGNC	ENSG00000145246				117	0	0.00	76	4	5.00
BHLHE22	0	genome.wustl.edu	37	8	65493930	65493930	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	8	65493930	65493930	G	A	SNP	BHLHE22	ENST00000321870	human	ensembl	74_37	+1	known	missense	c.583	p.V195I	0.103	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	BHLHE22	HGNC	ENSG00000180828				10	0	0.00	10	6	37.50
BMP8B	0	genome.wustl.edu	37	1	40230448	40230448	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	1	40230448	40230448	G	A	SNP	BMP8B	ENST00000372827	human	ensembl	74_37	-1	known	missense	c.715	p.R239W	0.008	pfam_TGF-b_N	pfam_TGF-b_N,pfam_TGF-b_C,smart_TGF-b_C,prints_Inhibin_asu	-	no_errors	BMP8B	HGNC	ENSG00000116985	tier1	-	-	199	0	0.00	82	10	10.87
BTBD7	0	genome.wustl.edu	37	14	93754909	93754909	+	Frame_Shift_Del	DEL	T	T	-			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	14	93754909	93754909	T	-	DEL	BTBD7	ENST00000555525	human	ensembl	74_37	-1	putative	frame_shift_del	c.1330	p.R444fs	0.538	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	BTBD7	HGNC	ENSG00000011114	tier1			15	0	0.00	11	2	15.38
C10orf11	0	genome.wustl.edu	37	10	77542758	77542758	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	10	77542758	77542758	G	T	SNP	C10orf11	ENST00000372499	human	ensembl	74_37	+1	known	missense	c.25	p.G9C	0.998	NULL	NULL	-	no_errors	C10orf11	HGNC	ENSG00000148655				25	0	0.00	17	2	10.53
C3orf62	0	genome.wustl.edu	37	3	49308821	49308821	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	3	49308821	49308821	T	C	SNP	C3orf62	ENST00000343010	human	ensembl	74_37	-1	known	missense	c.596	p.E199G	0.831	NULL	NULL	-	no_errors	C3orf62	HGNC	ENSG00000188315	tier1	-	-	56	0	0.00	18	26	59.09
C9orf169	0	genome.wustl.edu	37	9	140120094	140120094	+	Silent	SNP	C	C	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	9	140120094	140120094	C	A	SNP	C9orf169	ENST00000359069	human	ensembl	74_37	+1	known	silent	c.21	p.V7	0.125	pfam_UPF0574	pfam_UPF0574	-	no_errors	C9orf169	HGNC	ENSG00000197191	tier1	-	-	42	0	0.00	44	24	35.29
CD248	0	genome.wustl.edu	37	11	66082734	66082734	+	Nonsense_Mutation	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	11	66082734	66082734	G	A	SNP	CD248	ENST00000311330	human	ensembl	74_37	-1	known	nonsense	c.1765	p.Q589*	0.738	NULL	pfam_C-type_lectin,pfam_EGF-like_Ca-bd_dom,superfamily_C-type_lectin_fold,smart_C-type_lectin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_C-type_lectin	-	no_errors	CD248	HGNC	ENSG00000174807	tier1	-	-	46	0	0.00	19	6	24.00
CD38	0	genome.wustl.edu	37	4	15818189	15818189	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	4	15818189	15818189	C	A	SNP	CD38	ENST00000226279	human	ensembl	74_37	+1	known	missense	c.289	p.H97N	0.336	pfam_ADP-ribosyl_cyclase	pfam_ADP-ribosyl_cyclase	-	no_errors	CD38	HGNC	ENSG00000004468	tier1	-	-	84	0	0.00	44	20	30.77
CDON	0	genome.wustl.edu	37	11	125889553	125889553	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	11	125889553	125889553	G	T	SNP	CDON	ENST00000392693	human	ensembl	74_37	-1	known	missense	c.457	p.R153S	1.000	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CDON	HGNC	ENSG00000064309				78	0	0.00	47	3	5.88
CEBPA	0	genome.wustl.edu	37	19	33792456	33792456	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	19	33792456	33792456	G	A	SNP	CEBPA	ENST00000498907	human	ensembl	74_37	-1	known	missense	c.865	p.R289C	1.000	pfam_bZIP,smart_bZIP,pirsf_CCAAT/enhancer-binding,pfscan_bZIP	pfam_bZIP,smart_bZIP,pirsf_CCAAT/enhancer-binding,pfscan_bZIP	-	no_errors	CEBPA	HGNC	ENSG00000245848				87	0	0.00	54	3	5.26
CEL	0	genome.wustl.edu	37	9	135946427	135946427	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	9	135946427	135946427	C	T	SNP	CEL	ENST00000372080	human	ensembl	74_37	+1	known	missense	c.1547	p.T516M	0.000	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AB_hydrolase_3	-	no_errors	CEL	HGNC	ENSG00000170835	tier1	-	-	64	0	0.00	44	9	16.98
CEP57L1	0	genome.wustl.edu	37	6	109468002	109468002	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	6	109468002	109468002	C	T	SNP	CEP57L1	ENST00000359793	human	ensembl	74_37	+1	known	missense	c.202	p.R68C	0.998	NULL	pfam_Cep57_MT-bd_dom	-	no_errors	CEP57L1	HGNC	ENSG00000183137	tier1	-	-	71	0	0.00	44	10	18.52
CLDND1	0	genome.wustl.edu	37	3	98240278	98240278	+	Silent	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	3	98240278	98240278	C	T	SNP	CLDND1	ENST00000437922	human	ensembl	74_37	-1	known	silent	c.60	p.L20	1.000	NULL	pfam_PMP22/EMP/MP20/Claudin	-	no_errors	CLDND1	HGNC	ENSG00000080822				15	0	0.00	13	5	27.78
CRLF2	0	genome.wustl.edu	37	X	1327703	1327703	+	Missense_Mutation	SNP	A	A	G			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	X	1327703	1327703	A	G	SNP	CRLF2	ENST00000381567	human	ensembl	74_37	-1	known	missense	c.178	p.Y60H	0.030	superfamily_Fibronectin_type3	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	CRLF2	HGNC	ENSG00000205755	tier1	-	-	255	0	0.00	223	32	12.55
CRLF2	0	genome.wustl.edu	37	X	1327704	1327704	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	X	1327704	1327704	G	T	SNP	CRLF2	ENST00000381567	human	ensembl	74_37	-1	known	missense	c.177	p.H59Q	0.029	superfamily_Fibronectin_type3	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	CRLF2	HGNC	ENSG00000205755	tier1	-	-	253	0	0.00	224	32	12.50
CTNNA2	0	genome.wustl.edu	37	2	80782891	80782891	+	Silent	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	2	80782891	80782891	G	T	SNP	CTNNA2	ENST00000361291	human	ensembl	74_37	+1	known	silent	c.1716	p.R572	0.998	pfam_Vinculin/catenin,superfamily_Vinculin/catenin	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin,prints_Vinculin	-	no_errors	CTNNA2	HGNC	ENSG00000066032				57	0	0.00	36	2	5.13
CTNNA3	0	genome.wustl.edu	37	10	68280417	68280417	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	10	68280417	68280417	C	T	SNP	CTNNA3	ENST00000373744	human	ensembl	74_37	-1	known	missense	c.1489	p.V497I	1.000	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin,prints_Vinculin	-	no_errors	CTNNA3	HGNC	ENSG00000183230	tier1	-	-	65	0	0.00	39	24	38.10
CUX1	0	genome.wustl.edu	37	7	101916646	101916646	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	7	101916646	101916646	C	T	SNP	CUX1	ENST00000292538	human	ensembl	74_37	+1	known	missense	c.1265	p.A422V	0.963	pfam_CASP_C	pfam_CASP_C,superfamily_LemA-like_dom	-	no_errors	CUX1	HGNC	ENSG00000257923	tier1	-	-	71	0	0.00	62	14	18.42
CXorf31	0	genome.wustl.edu	37	X	46753976	46753976	+	Silent	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	X	46753976	46753976	G	T	SNP	CXorf31	ENST00000377879	human	ensembl	74_37	-1	known	silent	c.33	p.T11	0.000	NULL	NULL	-	no_errors	CXorf31	HGNC	ENSG00000204904	tier1	-	-	49	0	0.00	26	4	13.33
CYFIP1	0	genome.wustl.edu	37	15	22940818	22940818	+	Silent	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	15	22940818	22940818	G	A	SNP	CYFIP1	ENST00000313077	human	ensembl	74_37	+1	known	silent	c.1083	p.S361	0.006	pirsf_Cytoplasmic_FMR1-int_sub	pfam_Cytoplasmic_FMR1-int,pirsf_Cytoplasmic_FMR1-int_sub,prints_Cytoplasmic_FMR1-int	-	no_errors	CYFIP1	HGNC	ENSG00000068793				36	0	0.00	19	2	9.52
CYP4F2	0	genome.wustl.edu	37	19	15990223	15990223	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	19	15990223	15990223	G	T	SNP	CYP4F2	ENST00000221700	human	ensembl	74_37	-1	known	missense	c.1330	p.R444S	0.994	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_E_grp-II	-	no_errors	CYP4F2	HGNC	ENSG00000186115	tier1	-	-	87	0	0.00	49	59	54.63
DCAF12L2	0	genome.wustl.edu	37	X	125298846	125298846	+	Silent	SNP	C	C	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	X	125298846	125298846	C	A	SNP	DCAF12L2	ENST00000360028	human	ensembl	74_37	-1	known	silent	c.1062	p.R354	0.999	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF12L2	HGNC	ENSG00000198354	tier1	-	-	37	0	0.00	3	14	82.35
DCBLD1	0	genome.wustl.edu	37	6	117859866	117859866	+	Nonsense_Mutation	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	6	117859866	117859866	C	T	SNP	DCBLD1	ENST00000338728	human	ensembl	74_37	+1	known	nonsense	c.844	p.Q282*	0.001	pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	pfam_Coagulation_fac_5/8-C_type_dom,pfam_LCCL,pfam_CUB_dom,superfamily_Galactose-bd-like,superfamily_LCCL,superfamily_CUB_dom,smart_CUB_dom,smart_LCCL,smart_Coagulation_fac_5/8-C_type_dom,pfscan_CUB_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_LCCL	-	no_errors	DCBLD1	HGNC	ENSG00000164465	tier1	-	-	58	0	0.00	23	16	41.03
DERL3	0	genome.wustl.edu	37	22	24180922	24180922	+	Silent	SNP	C	C	G			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	22	24180922	24180922	C	G	SNP	DERL3	ENST00000318109	human	ensembl	74_37	-1	known	silent	c.135	p.P45	0.994	pfam_DER1	pfam_DER1	-	no_errors	DERL3	HGNC	ENSG00000099958	tier1	-	-	124	0	0.00	46	9	16.36
DGKH	0	genome.wustl.edu	37	13	42784739	42784739	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	13	42784739	42784739	C	T	SNP	DGKH	ENST00000337343	human	ensembl	74_37	+1	known	missense	c.2852	p.A951V	1.000	NULL	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Pleckstrin_homology,pfam_SAM_2,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_SAM_type1,superfamily_SAM/pointed,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,smart_SAM,pfscan_Pleckstrin_homology,pfscan_SAM,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DGKH	HGNC	ENSG00000102780	tier1	-	-	72	0	0.00	56	4	6.67
DLX2	0	genome.wustl.edu	37	2	172967148	172967148	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	2	172967148	172967148	T	C	SNP	DLX2	ENST00000234198	human	ensembl	74_37	-1	known	missense	c.119	p.N40S	0.992	NULL	pfam_Homeobox_dom,pfam_Distal-less_N,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	DLX2	HGNC	ENSG00000115844				60	0	0.00	29	4	12.12
DMD	0	genome.wustl.edu	37	X	32862923	32862923	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	X	32862923	32862923	G	T	SNP	DMD	ENST00000357033	human	ensembl	74_37	-1	known	missense	c.241	p.L81M	0.998	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pirsf_Dystrophin/utrophin,pfscan_CH-domain	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947	tier1	-	-	54	0	0.00	12	3	20.00
DNMT1	0	genome.wustl.edu	37	19	10257175	10257175	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	19	10257175	10257175	C	T	SNP	DNMT1	ENST00000359526	human	ensembl	74_37	-1	known	missense	c.2746	p.A916T	0.894	pirsf_DNA_C5-MeTrfase_1_euk	pirsf_DNA_C5-MeTrfase_1_euk,pfam_C5_MeTfrase,pfam_BAH_dom,pfam_Cytosine_MeTrfase1_RFD,pfam_DMAP1-bd,pfam_Znf_CXXC,smart_BAH_dom,prints_C5_MeTfrase,pfscan_BAH_dom,pfscan_Znf_CXXC	-	no_errors	DNMT1	HGNC	ENSG00000130816				93	0	0.00	52	3	5.45
DOCK11	0	genome.wustl.edu	37	X	117700054	117700054	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	X	117700054	117700054	G	A	SNP	DOCK11	ENST00000276202	human	ensembl	74_37	+1	known	missense	c.780	p.M260I	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_DOCK_C,pfam_DOCK_C/D_N,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	DOCK11	HGNC	ENSG00000147251	tier1	-	-	63	0	0.00	13	40	75.47
DPY19L2	0	genome.wustl.edu	37	12	64055262	64055263	+	Splice_Site	INS	-	-	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	12	64055262	64055263	-	T	INS	DPY19L2	ENST00000324472	human	ensembl	74_37	-1	known	splice_site_ins	c.451-2_451-1	e4-1	1.000:0.999	-	-	-	no_errors	DPY19L2	HGNC	ENSG00000177990	tier1			84	0	0.00	58	29	33.33
DSTYK	0	genome.wustl.edu	37	1	205117394	205117394	+	Silent	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	1	205117394	205117394	C	T	SNP	DSTYK	ENST00000367162	human	ensembl	74_37	-1	known	silent	c.2541	p.K847	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	DSTYK	HGNC	ENSG00000133059				46	0	0.00	29	2	6.45
ECE2	0	genome.wustl.edu	37	3	183995996	183995996	+	Silent	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	3	183995996	183995996	C	T	SNP	ECE2	ENST00000402825	human	ensembl	74_37	+1	known	silent	c.999	p.N333	1.000	pfam_Peptidase_M13_N	pfam_Peptidase_M13_N,pfam_Peptidase_M13_C,pfam_Methyltransf_11,prints_Peptidase_M13_C	-	no_errors	ECE2	HGNC	ENSG00000145194	tier1	-	-	61	0	0.00	27	17	38.64
ENKD1	0	genome.wustl.edu	37	16	67697103	67697103	+	Silent	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	16	67697103	67697103	G	A	SNP	ENKD1	ENST00000243878	human	ensembl	74_37	-1	known	silent	c.1002	p.I334	0.999	NULL	NULL	-	no_errors	ENKD1	HGNC	ENSG00000124074	tier1	-	-	68	0	0.00	20	24	54.55
ENSG00000221395	0	genome.wustl.edu	37	16	82875766	82875766	+	RNA	SNP	T	T	C			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	16	82875766	82875766	T	C	SNP	ENSG00000221395	ENST00000408468	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors	AC099506.1	Clone_based_ensembl_gene	ENSG00000221395	tier1	-	-	29	0	0.00	2	6	75.00
ENSG00000262456	0	genome.wustl.edu	37	17	2288155	2288155	+	RNA	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	17	2288155	2288155	C	T	SNP	ENSG00000262456	ENST00000571775	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP1-59D14.1	Clone_based_vega_gene	ENSG00000262456	tier1	-	-	25	0	0.00	27	18	40.00
ENSG00000271011	0	genome.wustl.edu	37	2	179442292	179442292	+	RNA	SNP	T	T	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	2	179442292	179442292	T	A	SNP	ENSG00000271011	ENST00000604215	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.663	-	-	-	no_errors	RP11-171I2.5	Clone_based_vega_gene	ENSG00000271011	tier1	-	-	57	0	0.00	50	4	7.41
ENSG00000272140	0	genome.wustl.edu	37	10	75463858	75463858	+	RNA	SNP	A	A	C			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	10	75463858	75463858	A	C	SNP	ENSG00000272140	ENST00000415917	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.174	-	-	-	no_errors	RP11-574K11.29	Clone_based_vega_gene	ENSG00000272140	tier1	-	-	110	0	0.00	44	17	27.87
ENTHD1	0	genome.wustl.edu	37	22	40283492	40283492	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	22	40283492	40283492	C	A	SNP	ENTHD1	ENST00000325157	human	ensembl	74_37	-1	known	missense	c.261	p.K87N	0.887	pfam_Epsin_dom_N,pfam_VHS,superfamily_ENTH_VHS,smart_Epsin-like_N,pfscan_Epsin-like_N	pfam_Epsin_dom_N,pfam_VHS,superfamily_ENTH_VHS,smart_Epsin-like_N,pfscan_Epsin-like_N	-	no_errors	ENTHD1	HGNC	ENSG00000176177	tier1	-	-	44	0	0.00	23	11	32.35
ETNK2	0	genome.wustl.edu	37	1	204101362	204101362	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	1	204101362	204101362	G	T	SNP	ETNK2	ENST00000367202	human	ensembl	74_37	-1	known	missense	c.1111	p.Q371K	1.000	superfamily_Kinase-like_dom	pfam_Aminoglycoside_PTrfase,superfamily_Kinase-like_dom	-	no_errors	ETNK2	HGNC	ENSG00000143845	tier1	-	-	38	0	0.00	17	3	15.00
FAM120A	0	genome.wustl.edu	37	9	96294581	96294581	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	9	96294581	96294581	G	T	SNP	FAM120A	ENST00000333936	human	ensembl	74_37	+1	known	missense	c.1963	p.A655S	1.000	NULL	NULL	-	no_errors	FAM120A	HGNC	ENSG00000048828	tier1	-	-	78	0	0.00	71	4	5.33
FAM131C	0	genome.wustl.edu	37	1	16385063	16385064	+	Frame_Shift_Ins	INS	-	-	G			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	1	16385063	16385064	-	G	INS	FAM131C	ENST00000375662	human	ensembl	74_37	-1	known	frame_shift_ins	c.712_711	p.S237fs	0.458:0.335	NULL	superfamily_Chromodomain-like	-	no_errors	FAM131C	HGNC	ENSG00000185519	tier1			66	0	0.00	27	8	22.86
FAM172A	0	genome.wustl.edu	37	5	93410402	93410402	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	5	93410402	93410402	G	T	SNP	FAM172A	ENST00000395965	human	ensembl	74_37	-1	known	missense	c.55	p.Q19K	1.000	NULL	pfam_Arb2_domain	-	no_errors	FAM172A	HGNC	ENSG00000113391				69	0	0.00	36	2	5.13
FAM175B	0	genome.wustl.edu	37	10	126517363	126517363	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	10	126517363	126517363	G	T	SNP	FAM175B	ENST00000298492	human	ensembl	74_37	+1	known	missense	c.497	p.G166V	1.000	prints_FAM175	prints_FAM175_BRISC_cplx_Abro1_su,prints_FAM175	-	no_errors	FAM175B	HGNC	ENSG00000165660	tier1	-	-	88	0	0.00	68	4	5.56
FAM181A	0	genome.wustl.edu	37	14	94394682	94394682	+	Silent	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	14	94394682	94394682	G	A	SNP	FAM181A	ENST00000267594	human	ensembl	74_37	+1	known	silent	c.237	p.A79	0.071	NULL	NULL	-	no_errors	FAM181A	HGNC	ENSG00000140067	tier1	-	-	65	0	0.00	26	13	33.33
FAM184B	0	genome.wustl.edu	37	4	17661603	17661603	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	4	17661603	17661603	T	G	SNP	FAM184B	ENST00000265018	human	ensembl	74_37	-1	known	missense	c.1802	p.Q601P	1.000	NULL	NULL	-	no_errors	FAM184B	HGNC	ENSG00000047662	tier1	-	-	71	0	0.00	49	7	12.50
FAM84A	0	genome.wustl.edu	37	2	14789551	14789551	+	RNA	SNP	C	C	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	2	14789551	14789551	C	A	SNP	FAM84A	ENST00000464947	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	FAM84A	HGNC	ENSG00000162981	tier1	-	-	96	0	0.00	36	24	40.00
FBXO31	0	genome.wustl.edu	37	16	87380786	87380786	+	Silent	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	16	87380786	87380786	G	A	SNP	FBXO31	ENST00000311635	human	ensembl	74_37	-1	known	silent	c.483	p.N161	0.998	NULL	pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO31	HGNC	ENSG00000103264	tier1	-	-	39	0	0.00	4	13	76.47
FCRL1	0	genome.wustl.edu	37	1	157773875	157773875	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	1	157773875	157773875	G	T	SNP	FCRL1	ENST00000368176	human	ensembl	74_37	-1	known	missense	c.79	p.H27N	0.000	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	FCRL1	HGNC	ENSG00000163534				86	0	0.00	41	4	8.89
FGF5	0	genome.wustl.edu	37	4	81196110	81196110	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	4	81196110	81196110	G	T	SNP	FGF5	ENST00000312465	human	ensembl	74_37	+1	known	nonsense	c.403	p.G135*	1.000	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	-	no_errors	FGF5	HGNC	ENSG00000138675	tier1	-	-	129	0	0.00	53	4	7.02
FLJ46361	0	genome.wustl.edu	37	10	124558447	124558447	+	RNA	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	10	124558447	124558447	G	T	SNP	FLJ46361	ENST00000605982	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-318C4.2	Clone_based_vega_gene	ENSG00000176584	tier1	-	-	103	0	0.00	47	13	21.67
FLNB	0	genome.wustl.edu	37	3	58092574	58092574	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	3	58092574	58092574	G	T	SNP	FLNB	ENST00000295956	human	ensembl	74_37	+1	known	missense	c.1915	p.A639S	0.923	superfamily_Ig_E-set,smart_Filamin	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNB	HGNC	ENSG00000136068				31	0	0.00	32	2	5.88
FRMD3	0	genome.wustl.edu	37	9	86153075	86153075	+	Silent	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	9	86153075	86153075	G	A	SNP	FRMD3	ENST00000304195	human	ensembl	74_37	-1	known	silent	c.72	p.S24	1.000	NULL	pfam_FERM_N,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	FRMD3	HGNC	ENSG00000172159	tier1	-	-	145	0	0.00	60	41	40.59
FSIP2	0	genome.wustl.edu	37	2	186664503	186664503	+	Nonsense_Mutation	SNP	C	C	G			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	2	186664503	186664503	C	G	SNP	FSIP2	ENST00000343098	human	ensembl	74_37	+1	known	nonsense	c.10737	p.Y3579*	0.000	NULL	NULL	-	no_errors	FSIP2	HGNC	ENSG00000188738	tier1	-	-	113	0	0.00	74	48	39.34
GAS1	0	genome.wustl.edu	37	9	89561664	89561664	+	Nonsense_Mutation	SNP	C	C	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	9	89561664	89561664	C	A	SNP	GAS1	ENST00000298743	human	ensembl	74_37	-1	known	nonsense	c.31	p.E11*	0.997	NULL	pfam_GDNF/GAS1,smart_GDNF/GAS1	-	no_errors	GAS1	HGNC	ENSG00000180447				47	0	0.00	26	8	23.53
GCH1	0	genome.wustl.edu	37	14	55312530	55312530	+	Silent	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	14	55312530	55312530	C	T	SNP	GCH1	ENST00000395514	human	ensembl	74_37	-1	known	silent	c.582	p.T194	0.997	pfam_GTP_CycHdrlase_I_dom,tigrfam_GTP_CycHdrlase_I	pfam_GTP_CycHdrlase_I_dom,tigrfam_GTP_CycHdrlase_I	-	no_errors	GCH1	HGNC	ENSG00000131979				46	0	0.00	54	3	5.26
GNAZ	0	genome.wustl.edu	37	22	23465296	23465296	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	22	23465296	23465296	G	A	SNP	GNAZ	ENST00000248996	human	ensembl	74_37	+1	known	missense	c.746	p.R249H	0.998	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su,prints_Gprotein_alpha_I	-	no_errors	GNAZ	HGNC	ENSG00000128266	tier1	-	-	80	0	0.00	20	22	52.38
GPR31	0	genome.wustl.edu	37	6	167570380	167570380	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	6	167570380	167570380	G	T	SNP	GPR31	ENST00000366834	human	ensembl	74_37	-1	known	missense	c.940	p.P314T	0.006	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR31	HGNC	ENSG00000120436				62	0	0.00	42	4	8.70
GPR55	0	genome.wustl.edu	37	2	231775309	231775309	+	Silent	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	2	231775309	231775309	G	A	SNP	GPR55	ENST00000392039	human	ensembl	74_37	-1	known	silent	c.369	p.I123	0.964	pfam_GPCR_Rhodpsn,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	GPR55	HGNC	ENSG00000135898	tier1	-	-	48	0	0.00	20	16	44.44
GREB1	0	genome.wustl.edu	37	2	11780510	11780510	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	2	11780510	11780510	G	A	SNP	GREB1	ENST00000234142	human	ensembl	74_37	+1	known	missense	c.5780	p.R1927H	0.996	NULL	superfamily_P-loop_NTPase	-	no_errors	GREB1	HGNC	ENSG00000196208	tier1	-	-	31	0	0.00	23	8	25.81
GRIP2	0	genome.wustl.edu	37	3	14549126	14549126	+	RNA	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	3	14549126	14549126	G	A	SNP	GRIP2	ENST00000273083	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	GRIP2	HGNC	ENSG00000144596	tier1	-	-	64	0	0.00	29	19	39.58
GRM8	0	genome.wustl.edu	37	7	126173519	126173519	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	7	126173519	126173519	C	T	SNP	GRM8	ENST00000339582	human	ensembl	74_37	-1	known	missense	c.1917	p.M639I	1.000	pfam_GPCR_3_C,pfscan_GPCR_3_C	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_8,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_4,pfscan_GPCR_3_C	-	no_errors	GRM8	HGNC	ENSG00000179603	tier1	-	-	41	0	0.00	30	5	14.29
GSDMC	0	genome.wustl.edu	37	8	130762320	130762320	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	8	130762320	130762320	T	G	SNP	GSDMC	ENST00000276708	human	ensembl	74_37	-1	known	missense	c.1129	p.I377L	0.200	pfam_Gasdermin	pfam_Gasdermin	-	no_errors	GSDMC	HGNC	ENSG00000147697	tier1	-	-	97	0	0.00	87	21	19.27
H2AFB1	0	genome.wustl.edu	37	X	154113573	154113573	+	Silent	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	X	154113573	154113573	C	T	SNP	H2AFB1	ENST00000354461	human	ensembl	74_37	+1	known	silent	c.249	p.I83	1.000	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H2A	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	-	no_errors	H2AFB1	HGNC	ENSG00000198082	tier1	-	-	182	0	0.00	82	62	43.06
HBG2	0	genome.wustl.edu	37	11	5275677	5275677	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	11	5275677	5275677	C	T	SNP	HBG2	ENST00000336906	human	ensembl	74_37	-1	known	missense	c.160	p.A54T	0.948	pfam_Globin,superfamily_Globin-like,pfscan_Globin,prints_Haemoglobin_b	pfam_Globin,superfamily_Globin-like,pfscan_Globin,prints_Haemoglobin_b,prints_Myoglobin	-	no_errors	HBG2	HGNC	ENSG00000196565	tier1	-	-	280	0	0.00	124	43	25.60
HGFAC	0	genome.wustl.edu	37	4	3443784	3443786	+	In_Frame_Del	DEL	TCC	TCC	-			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	TCC	TCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	4	3443784	3443786	TCC	-	DEL	HGFAC	ENST00000382774	human	ensembl	74_37	+1	known	in_frame_del	c.56_58	p.L23in_frame_del	0.728:0.710:0.712	pirsf_Coagulation_fac_XIIa/HGFA	pirsf_Coagulation_fac_XIIa/HGFA,pfam_Peptidase_S1,pfam_Kringle,pfam_FN_type2_col-bd,pfam_Fibronectin_type1,pfam_EG-like_dom,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_FN_type2_col-bd,smart_EG-like_dom,smart_Fibronectin_type1,smart_Kringle,smart_Peptidase_S1,pfscan_EG-like_dom,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Kringle,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	HGFAC	HGNC	ENSG00000109758	tier1			44	0	0.00	28	3	9.68
HIST2H2BF	0	genome.wustl.edu	37	1	149783548	149783548	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	1	149783548	149783548	C	T	SNP	HIST2H2BF	ENST00000427880	human	ensembl	74_37	-1	known	missense	c.331	p.A111T	1.000	superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	-	no_errors	HIST2H2BF	HGNC	ENSG00000203814	tier1	-	-	45	0	0.00	26	12	31.58
HIVEP2	0	genome.wustl.edu	37	6	143095613	143095613	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	6	143095613	143095613	C	T	SNP	HIVEP2	ENST00000012134	human	ensembl	74_37	-1	known	missense	c.263	p.R88H	0.993	NULL	pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP2	HGNC	ENSG00000010818	tier1	-	-	71	0	0.00	53	14	20.90
HIVEP3	0	genome.wustl.edu	37	1	42048742	42048742	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	1	42048742	42048742	C	T	SNP	HIVEP3	ENST00000247584	human	ensembl	74_37	-1	known	missense	c.1727	p.S576N	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP3	HGNC	ENSG00000127124				69	0	0.00	33	2	5.71
HPS5	0	genome.wustl.edu	37	11	18303559	18303559	+	Silent	SNP	A	A	G			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	11	18303559	18303559	A	G	SNP	HPS5	ENST00000349215	human	ensembl	74_37	-1	known	silent	c.3267	p.L1089	0.158	pirsf_BLOC-2_complex_Hps5_subunit	superfamily_WD40_repeat_dom,pirsf_BLOC-2_complex_Hps5_subunit	-	no_errors	HPS5	HGNC	ENSG00000110756	tier1	-	-	70	0	0.00	30	4	11.76
HS3ST1	0	genome.wustl.edu	37	4	11400771	11400771	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	4	11400771	11400771	C	T	SNP	HS3ST1	ENST00000002596	human	ensembl	74_37	-1	known	missense	c.859	p.E287K	0.979	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	HS3ST1	HGNC	ENSG00000002587	tier1	-	-	76	0	0.00	40	5	11.11
HS3ST1	0	genome.wustl.edu	37	4	11400857	11400857	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	4	11400857	11400857	C	A	SNP	HS3ST1	ENST00000002596	human	ensembl	74_37	-1	known	missense	c.773	p.R258L	1.000	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	HS3ST1	HGNC	ENSG00000002587	tier1	-	-	62	0	0.00	50	4	7.41
HTT	0	genome.wustl.edu	37	4	3240679	3240679	+	Frame_Shift_Del	DEL	G	G	-			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	4	3240679	3240679	G	-	DEL	HTT	ENST00000355072	human	ensembl	74_37	+1	known	frame_shift_del	c.9189	p.S3064fs	0.030	NULL	pfam_Huntingtin_middle-repeat,pfam_HEAT,superfamily_ARM-type_fold,prints_Huntingtin	-	no_errors	HTT	HGNC	ENSG00000197386	tier1			73	0	0.00	26	27	50.94
IKBKE	0	genome.wustl.edu	37	1	206652386	206652386	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	1	206652386	206652386	G	A	SNP	IKBKE	ENST00000367120	human	ensembl	74_37	+1	known	missense	c.1093	p.V365I	0.985	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	IKBKE	HGNC	ENSG00000143466	tier1	-	-	44	0	0.00	9	8	47.06
INSRR	0	genome.wustl.edu	37	1	156816460	156816460	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	1	156816460	156816460	C	T	SNP	INSRR	ENST00000368195	human	ensembl	74_37	-1	known	missense	c.1661	p.R554H	0.997	pirsf_Tyr_kinase_insulin-like_rcpt,superfamily_Fibronectin_type3,smart_Fibronectin_type3	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom	-	no_errors	INSRR	HGNC	ENSG00000027644	tier1	-	-	35	0	0.00	16	4	20.00
ITPKB	0	genome.wustl.edu	37	1	226923581	226923581	+	Nonsense_Mutation	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	1	226923581	226923581	G	A	SNP	ITPKB	ENST00000272117	human	ensembl	74_37	-1	known	nonsense	c.1579	p.Q527*	0.000	NULL	pfam_IPK	-	no_errors	ITPKB	HGNC	ENSG00000143772				54	0	0.00	37	3	7.32
KCNH4	0	genome.wustl.edu	37	17	40331008	40331008	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	17	40331008	40331008	C	A	SNP	KCNH4	ENST00000264661	human	ensembl	74_37	-1	known	missense	c.113	p.R38L	0.068	superfamily_PAS,pfscan_PAS	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_PAS_fold_3,pfam_PAS_fold,pfam_PAS_4,pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ELK,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH4	HGNC	ENSG00000089558	tier1	-	-	60	0	0.00	52	4	7.14
KCNJ12	0	genome.wustl.edu	37	17	21319388	21319388	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	17	21319388	21319388	C	T	SNP	KCNJ12	ENST00000331718	human	ensembl	74_37	+1	known	missense	c.734	p.P245L	1.000	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,pfam_K_chnl_inward-rec_Kir_N,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir2.2	-	no_errors	KCNJ12	HGNC	ENSG00000184185	tier1	rs140875968	-	126	0	0.00	99	12	10.81
KCNK15	0	genome.wustl.edu	37	20	43379101	43379101	+	Silent	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	20	43379101	43379101	C	T	SNP	KCNK15	ENST00000372861	human	ensembl	74_37	+1	known	silent	c.615	p.F205	0.998	pfam_2pore_dom_K_chnl_dom,pirsf_2pore_dom_K_chnl_TASK,prints_2pore_dom_K_chnl	pfam_2pore_dom_K_chnl_dom,pirsf_2pore_dom_K_chnl_TASK,prints_TASK5,prints_2pore_dom_K_chnl_TASK,prints_2pore_dom_K_chnl	-	no_errors	KCNK15	HGNC	ENSG00000124249				46	0	0.00	48	3	5.88
KHSRP	0	genome.wustl.edu	37	19	6416853	6416853	+	Frame_Shift_Del	DEL	G	G	-			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	19	6416853	6416853	G	-	DEL	KHSRP	ENST00000398148	human	ensembl	74_37	-1	known	frame_shift_del	c.1223	p.P408fs	0.998	NULL	pfam_KH_dom_type_1,pfam_KH_dom_type_2,pfam_DUF1897,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	KHSRP	HGNC	ENSG00000088247	tier1			127	0	0.00	38	2	5.00
KIAA0141	0	genome.wustl.edu	37	5	141309193	141309193	+	Silent	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	5	141309193	141309193	G	A	SNP	KIAA0141	ENST00000194118	human	ensembl	74_37	+1	known	silent	c.459	p.R153	0.034	NULL	pfam_Sel1-like,smart_Sel1-like	-	no_errors	KIAA0141	HGNC	ENSG00000081791				47	0	0.00	40	4	9.09
KIAA2022	0	genome.wustl.edu	37	X	73961539	73961539	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	X	73961539	73961539	G	T	SNP	KIAA2022	ENST00000055682	human	ensembl	74_37	-1	known	missense	c.2853	p.D951E	0.967	NULL	NULL	-	no_errors	KIAA2022	HGNC	ENSG00000050030	tier1	-	-	48	0	0.00	24	3	11.11
KLF12	0	genome.wustl.edu	37	13	74420344	74420344	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	13	74420344	74420344	G	A	SNP	KLF12	ENST00000377666	human	ensembl	74_37	-1	known	missense	c.290	p.S97L	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF12	HGNC	ENSG00000118922	tier1	-	-	125	0	0.00	54	45	45.45
KPNB1	0	genome.wustl.edu	37	17	45738512	45738512	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	17	45738512	45738512	G	A	SNP	KPNB1	ENST00000290158	human	ensembl	74_37	+1	known	missense	c.664	p.V222I	1.000	superfamily_ARM-type_fold	pfam_HEAT,pfam_Importin-beta_N,pfam_Armadillo,superfamily_ARM-type_fold,smart_Importin-beta_N,smart_Armadillo,pfscan_HEAT_type_2,pfscan_Importin-beta_N	-	no_errors	KPNB1	HGNC	ENSG00000108424	tier1	-	-	81	0	0.00	34	21	38.18
KRTAP10-7	0	genome.wustl.edu	37	21	46020564	46020564	+	Missense_Mutation	SNP	T	T	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	21	46020564	46020564	T	A	SNP	KRTAP10-7	ENST00000380102	human	ensembl	74_37	+1	known	missense	c.43	p.Y15N	0.002	NULL	NULL	-	no_errors	KRTAP10-7	HGNC	ENSG00000205441	tier1	-	-	184	0	0.00	32	64	66.67
LMTK3	0	genome.wustl.edu	37	19	49003083	49003083	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	19	49003083	49003083	G	A	SNP	LMTK3	ENST00000270238	human	ensembl	74_37	-1	known	missense	c.1330	p.R444W	1.000	superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LMTK3	HGNC	ENSG00000142235	tier1	-	-	75	0	0.00	36	4	10.00
LOC100128682	0	genome.wustl.edu	37	19	35899445	35899445	+	RNA	SNP	C	C	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	19	35899445	35899445	C	A	SNP	LOC100128682	ENST00000536898	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	AC002511.1	Clone_based_vega_gene	ENSG00000205786	tier1	-	-	59	0	0.00	25	13	34.21
LOC100131347	0	genome.wustl.edu	37	17	37263851	37263851	+	RNA	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	17	37263851	37263851	G	A	SNP	LOC100131347	ENST00000578423	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTD-2206N4.4	Clone_based_vega_gene	ENSG00000263818	tier1	-	-	85	0	0.00	45	19	29.69
LOC101927806	0	genome.wustl.edu	37	1	17198381	17198381	+	RNA	SNP	T	T	G			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	1	17198381	17198381	T	G	SNP	LOC101927806	ENST00000438002	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	U1	RFAM	ENSG00000228549	tier1	rs199674141	-	45	0	0.00	24	4	14.29
LOC101929787	0	genome.wustl.edu	37	1	145018788	145018788	+	RNA	SNP	T	T	C			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	1	145018788	145018788	T	C	SNP	LOC101929787	ENST00000610119	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	RP11-326G21.1	Clone_based_vega_gene	ENSG00000272755	tier1	rs1052063	-	8	0	0.00	2	5	71.43
LOC440040	0	genome.wustl.edu	37	11	49831501	49831501	+	RNA	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	11	49831501	49831501	G	A	SNP	LOC440040	ENST00000527477	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.555	-	-	-	no_errors	RP11-707M1.1	Clone_based_vega_gene	ENSG00000205035	tier1	-	-	302	0	0.00	92	97	51.05
LRRCC1	0	genome.wustl.edu	37	8	86044118	86044118	+	Silent	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	8	86044118	86044118	C	T	SNP	LRRCC1	ENST00000360375	human	ensembl	74_37	+1	known	silent	c.1890	p.D630	0.000	NULL	pfam_Leu-rich_rpt,superfamily_Prefoldin	-	no_errors	LRRCC1	HGNC	ENSG00000133739	tier1	-	-	75	0	0.00	105	10	8.70
ME2	0	genome.wustl.edu	37	18	48466002	48466002	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	18	48466002	48466002	G	T	SNP	ME2	ENST00000321341	human	ensembl	74_37	+1	known	missense	c.1480	p.A494S	1.000	pfam_Malic_NAD-bd,smart_Malic_NAD-bd	pfam_Malic_NAD-bd,pfam_Malic_N,smart_Malic_NAD-bd,prints_Malic_OxRdtase	-	no_errors	ME2	HGNC	ENSG00000082212	tier1	-	-	113	0	0.00	66	4	5.71
MFRP	0	genome.wustl.edu	37	11	119213351	119213351	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	11	119213351	119213351	C	T	SNP	MFRP	ENST00000449574	human	ensembl	74_37	-1	known	missense	c.1342	p.D448N	0.028	superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt	pfam_CUB_dom,pfam_Frizzled_dom,pfam_LDrepeatLR_classA_rpt,superfamily_CUB_dom,superfamily_Frizzled_dom,superfamily_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_LDrepeatLR_classA_rpt,smart_Frizzled_dom,pfscan_CUB_dom,pfscan_Frizzled_dom,pfscan_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	MFRP	HGNC	ENSG00000235718	tier1	rs142846614	-	33	0	0.00	14	12	46.15
MFSD10	0	genome.wustl.edu	37	4	2933849	2933849	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	4	2933849	2933849	G	A	SNP	MFSD10	ENST00000329687	human	ensembl	74_37	-1	known	missense	c.725	p.A242V	0.058	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	MFSD10	HGNC	ENSG00000109736				33	0	0.00	27	2	6.90
MN1	0	genome.wustl.edu	37	22	28194933	28194933	+	Silent	SNP	T	T	C			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	22	28194933	28194933	T	C	SNP	MN1	ENST00000302326	human	ensembl	74_37	-1	known	silent	c.1599	p.Q533	0.993	NULL	NULL	-	no_errors	MN1	HGNC	ENSG00000169184	tier1	-	-	45	0	0.00	19	4	17.39
MRGPRF	0	genome.wustl.edu	37	11	68773432	68773432	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	11	68773432	68773432	G	A	SNP	MRGPRF	ENST00000309099	human	ensembl	74_37	-1	known	missense	c.346	p.R116C	0.835	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	MRGPRF	HGNC	ENSG00000172935	tier1	-	-	99	0	0.00	50	15	23.08
MT-ND5	0	genome.wustl.edu	37	MT	12417	12418	+	Frame_Shift_Ins	INS	-	-	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	MT	12417	12418	-	A	INS	MT-ND5	ENST00000361567	human	ensembl	74_37	+1	known	frame_shift_ins	c.81_82	p.N29fs	NULL	tigrfam_NADHpl_OxRdtase_5	pfam_NADH_UbQ/plastoQ_OxRdtase,pfam_NADH_DH_su5_C,pfam_NADH_UbQ_OxRdtase_chain5/L_N,tigrfam_NADHpl_OxRdtase_5	-	no_errors	MT-ND5	HGNC	ENSG00000198786	tier1			14	0	0.00	2	6	75.00
MTMR10	0	genome.wustl.edu	37	15	31235188	31235188	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	15	31235188	31235188	C	T	SNP	MTMR10	ENST00000435680	human	ensembl	74_37	-1	known	missense	c.1636	p.A546T	0.387	NULL	pfam_Myotubularin_assoc,pfam_Myotubularin-like_Pase_dom	-	no_errors	MTMR10	HGNC	ENSG00000166912	tier1	-	-	97	0	0.00	53	4	7.02
MUC5B	0	genome.wustl.edu	37	11	1278831	1278831	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	11	1278831	1278831	G	T	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	missense	c.16350	p.K5450N	0.000	smart_VWC_out,smart_VWF_C,pfscan_VWF_C	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983				138	0	0.00	71	4	5.33
MUC6	0	genome.wustl.edu	37	11	1013970	1013972	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	11	1013970	1013972	CTC	-	DEL	MUC6	ENST00000421673	human	ensembl	74_37	-1	known	in_frame_del	c.7071_7069	p.E2357in_frame_del	0.081:0.065:0.053	smart_Cys_knot_C,pfscan_Cys_knot_C	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	MUC6	HGNC	ENSG00000184956	tier1			115	0	0.00	68	19	21.84
MYH8	0	genome.wustl.edu	37	17	10298754	10298754	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	17	10298754	10298754	G	C	SNP	MYH8	ENST00000403437	human	ensembl	74_37	-1	known	missense	c.4658	p.S1553C	1.000	pfam_Myosin_tail,superfamily_t-SNARE	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_t-SNARE,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH8	HGNC	ENSG00000133020	tier1	-	-	60	0	0.00	63	16	20.25
MYO15A	0	genome.wustl.edu	37	17	18034622	18034622	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	17	18034622	18034622	C	T	SNP	MYO15A	ENST00000205890	human	ensembl	74_37	+1	known	missense	c.4108	p.R1370C	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_SH3_2,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_SH3_domain,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO15A	HGNC	ENSG00000091536	tier1	-	-	105	0	0.00	53	32	37.65
MZB1	0	genome.wustl.edu	37	5	138725510	138725512	+	In_Frame_Del	DEL	CAG	CAG	-			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	CAG	CAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	5	138725510	138725512	CAG	-	DEL	MZB1	ENST00000503481	human	ensembl	74_37	-1	known	in_frame_del	c.36_34	p.L12in_frame_del	0.366:0.352:0.265	NULL	NULL	-	no_errors	MZB1	HGNC	ENSG00000170476	tier1			26	0	0.00	28	3	9.68
NFKBIZ	0	genome.wustl.edu	37	3	101572494	101572494	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	3	101572494	101572494	G	T	SNP	NFKBIZ	ENST00000326172	human	ensembl	74_37	+1	known	missense	c.1124	p.S375I	0.006	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	NFKBIZ	HGNC	ENSG00000144802	tier1	-	-	57	0	0.00	31	4	11.43
NFX1	0	genome.wustl.edu	37	9	33311168	33311168	+	Nonsense_Mutation	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	9	33311168	33311168	C	T	SNP	NFX1	ENST00000379540	human	ensembl	74_37	+1	known	nonsense	c.1441	p.R481*	1.000	NULL	pfam_Znf_NFX1,pfam_R3H_ss-bd,smart_Znf_RING,smart_Znf_NFX1,smart_R3H_ss-bd,pfscan_Znf_PHD-finger,pfscan_Znf_RING,pfscan_R3H_ss-bd	-	no_errors	NFX1	HGNC	ENSG00000086102	tier1	-	-	75	0	0.00	23	22	48.89
NLGN1	0	genome.wustl.edu	37	3	173322858	173322858	+	Missense_Mutation	SNP	A	A	C			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	3	173322858	173322858	A	C	SNP	NLGN1	ENST00000401917	human	ensembl	74_37	+1	known	missense	c.470	p.N157T	1.000	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Neuroligin	-	no_errors	NLGN1	HGNC	ENSG00000169760	tier1	-	-	32	0	0.00	20	11	35.48
NPEPPS	0	genome.wustl.edu	37	17	45695743	45695743	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	17	45695743	45695743	G	T	SNP	NPEPPS	ENST00000322157	human	ensembl	74_37	+1	known	nonsense	c.2323	p.E775*	1.000	NULL	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	NPEPPS	HGNC	ENSG00000141279	tier1	-	-	97	0	0.00	26	24	48.00
NSUN3	0	genome.wustl.edu	37	3	93795412	93795412	+	RNA	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	3	93795412	93795412	G	T	SNP	NSUN3	ENST00000494128	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.998	-	-	-	no_errors	NSUN3	HGNC	ENSG00000178694	tier1	-	-	21	0	0.00	16	4	20.00
NYAP1	0	genome.wustl.edu	37	7	100084522	100084522	+	Silent	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	7	100084522	100084522	C	T	SNP	NYAP1	ENST00000423930	human	ensembl	74_37	+1	known	silent	c.147	p.I49	0.997	NULL	NULL	-	no_errors	NYAP1	HGNC	ENSG00000166924	tier1	-	-	23	0	0.00	20	4	16.67
OR4D11	0	genome.wustl.edu	37	11	59271520	59271520	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	11	59271520	59271520	G	A	SNP	OR4D11	ENST00000313253	human	ensembl	74_37	+1	known	missense	c.472	p.V158M	0.800	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4D11	HGNC	ENSG00000176200	tier1	-	-	98	0	0.00	57	27	32.14
OR6A2	0	genome.wustl.edu	37	11	6816472	6816472	+	Silent	SNP	T	T	C			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	11	6816472	6816472	T	C	SNP	OR6A2	ENST00000332601	human	ensembl	74_37	-1	known	silent	c.468	p.G156	0.132	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6A2	HGNC	ENSG00000184933				61	0	0.00	40	4	9.09
OTOP3	0	genome.wustl.edu	37	17	72943349	72943349	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	17	72943349	72943349	T	C	SNP	OTOP3	ENST00000328801	human	ensembl	74_37	+1	known	missense	c.1399	p.F467L	1.000	pfam_Otopetrin	pfam_Otopetrin	-	no_errors	OTOP3	HGNC	ENSG00000182938	tier1	-	-	40	0	0.00	15	18	54.55
PABPC3	0	genome.wustl.edu	37	13	25670411	25670411	+	Silent	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	13	25670411	25670411	G	A	SNP	PABPC3	ENST00000281589	human	ensembl	74_37	+1	known	silent	c.75	p.A25	0.997	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_PABP_1234	pfam_RRM_dom,pfam_PABP_HYD,superfamily_PABP_HYD,smart_RRM_dom,smart_RRM_dom_euk,smart_PABP_HYD,pfscan_RRM_dom,tigrfam_PABP_1234	-	no_errors	PABPC3	HGNC	ENSG00000151846	tier1	-	-	108	0	0.00	66	11	14.29
PAPD5	0	genome.wustl.edu	37	16	50263692	50263693	+	RNA	INS	-	-	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	16	50263692	50263693	-	T	INS	PAPD5	ENST00000573002	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000:0.737	-	-	-	no_errors	PAPD5	HGNC	ENSG00000121274	tier1			51	0	0.00	33	6	15.38
PAX7	0	genome.wustl.edu	37	1	19071366	19071366	+	Silent	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	1	19071366	19071366	C	T	SNP	PAX7	ENST00000420770	human	ensembl	74_37	+1	known	silent	c.1461	p.L487	0.019	NULL	pfam_Paired_dom,pfam_Homeobox_dom,pfam_Pax7,superfamily_Homeodomain-like,smart_Paired_dom,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Paired_dom,prints_Paired_dom	-	no_errors	PAX7	HGNC	ENSG00000009709	tier1	-	-	79	0	0.00	16	7	30.43
PCDH1	0	genome.wustl.edu	37	5	141244972	141244972	+	Silent	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	5	141244972	141244972	G	A	SNP	PCDH1	ENST00000287008	human	ensembl	74_37	-1	known	silent	c.924	p.D308	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH1	HGNC	ENSG00000156453	tier1	-	-	39	0	0.00	23	9	28.12
PDIA4	0	genome.wustl.edu	37	7	148718188	148718190	+	In_Frame_Del	DEL	TCC	TCC	-			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	TCC	TCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	7	148718188	148718190	TCC	0	DEL	PDIA4	ENST00000286091	human	ensembl	74_37	-1	known	in_frame_del	c.140_138	p.E47in_frame_del	0.950:0.950:0.167	pirsf_Protein_diS-isomerase_A4	pirsf_Protein_diS-isomerase_A4,pfam_Thioredoxin_domain,pfam_Calsequestrin,superfamily_Thioredoxin-like_fold,prints_Thioredoxin,prints_Calsequestrin,tigrfam_Prot_disulphide_isomerase,tigrfam_Disulphide_isomerase	-	no_errors	PDIA4	HGNC	ENSG00000155660				74	0	0.00	59	4	6.35
PIK3R1	0	genome.wustl.edu	37	5	67591135	67591137	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	5	67591135	67591137	GAG	-	DEL	PIK3R1	ENST00000396611	human	ensembl	74_37	+1	known	in_frame_del	c.1728_1730	p.R577in_frame_del	0.016:0.975:1.000	prints_PI3kinase_P85	pfam_SH2,pfam_RhoGAP_dom,pfam_SH3_2,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_Guanylate-bd_C,smart_SH3_domain,smart_RhoGAP_dom,smart_SH2,pfscan_SH2,pfscan_SH3_domain,pfscan_RhoGAP_dom,prints_PI3kinase_P85,prints_SH2	-	no_errors	PIK3R1	HGNC	ENSG00000145675	tier1			95	0	0.00	30	14	31.82
PPAP2B	0	genome.wustl.edu	37	1	56990007	56990007	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	1	56990007	56990007	C	T	SNP	PPAP2B	ENST00000371250	human	ensembl	74_37	-1	known	missense	c.517	p.E173K	0.069	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	PPAP2B	HGNC	ENSG00000162407				60	0	0.00	29	2	6.45
PRKCD	0	genome.wustl.edu	37	3	53221364	53221364	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	3	53221364	53221364	C	T	SNP	PRKCD	ENST00000330452	human	ensembl	74_37	+1	known	missense	c.1361	p.A454V	0.392	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Prot_kin_PKC_delta,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Prot_kin_PKC_delta,prints_DAG/PE-bd,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	PRKCD	HGNC	ENSG00000163932				90	0	0.00	77	5	6.02
PRRT3	0	genome.wustl.edu	37	3	9990484	9990484	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	3	9990484	9990484	C	T	SNP	PRRT3	ENST00000295984	human	ensembl	74_37	-1	known	missense	c.1129	p.A377T	0.000	NULL	NULL	-	no_errors	PRRT3	HGNC	ENSG00000163704	tier1	-	-	61	0	0.00	57	4	6.56
PSMA3	0	genome.wustl.edu	37	14	58734209	58734209	+	Silent	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	14	58734209	58734209	C	T	SNP	PSMA3	ENST00000216455	human	ensembl	74_37	+1	known	silent	c.561	p.C187	1.000	pfam_Proteasome_sua/b	pfam_Proteasome_sua/b,pfam_Proteasome_asu_N,smart_Proteasome_asu_N	-	no_errors	PSMA3	HGNC	ENSG00000100567	tier1	-	-	129	0	0.00	73	42	36.52
PTENP1	0	genome.wustl.edu	37	9	33674343	33674344	+	RNA	INS	-	-	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	9	33674343	33674344	-	T	INS	PTENP1	ENST00000532280	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.829:0.837	-	-	-	no_errors	PTENP1	HGNC	ENSG00000237984	tier1			17	0	0.00	8	3	27.27
PUS7	0	genome.wustl.edu	37	7	105111289	105111289	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	7	105111289	105111289	T	C	SNP	PUS7	ENST00000356362	human	ensembl	74_37	-1	known	missense	c.1244	p.K415R	1.000	pfam_PsdUridine_synth_TruD,superfamily_PsdUridine_synth_cat_dom,pirsf_PsdUridine_synth_TruD_euk,pfscan_PsdUridine_synth_TruD_insert,tigrfam_PsdUridine_synth_TruD	pfam_PsdUridine_synth_TruD,superfamily_PsdUridine_synth_cat_dom,pirsf_PsdUridine_synth_TruD_euk,pfscan_PsdUridine_synth_TruD_insert,tigrfam_PsdUridine_synth_TruD	-	no_errors	PUS7	HGNC	ENSG00000091127				69	0	0.00	53	3	5.36
PVRL2	0	genome.wustl.edu	37	19	45381598	45381600	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	19	45381598	45381600	GAG	-	DEL	PVRL2	ENST00000252485	human	ensembl	74_37	+1	known	in_frame_del	c.1161_1163	p.R391in_frame_del	0.999:1.000:1.000	NULL	pfam_CD80_C2-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	PVRL2	HGNC	ENSG00000130202	tier1			38	0	0.00	27	3	10.00
RABEP2	0	genome.wustl.edu	37	16	28919949	28919949	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	16	28919949	28919949	G	A	SNP	RABEP2	ENST00000358201	human	ensembl	74_37	-1	known	missense	c.1226	p.S409L	0.003	pfam_Rabaptin_Rab5-bd_dom	pfam_Rabaptin_coiled-coil,pfam_Rabaptin_Rab5-bd_dom,prints_Rabaptin	-	no_errors	RABEP2	HGNC	ENSG00000177548	tier1	-	-	59	0	0.00	37	4	9.76
RABGAP1	0	genome.wustl.edu	37	9	125838524	125838524	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	9	125838524	125838524	G	T	SNP	RABGAP1	ENST00000373647	human	ensembl	74_37	+1	known	nonsense	c.2254	p.G752*	1.000	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,pfam_Kinesin-like,pfam_PTB/PI_dom,superfamily_Rab-GTPase-TBC_dom,smart_PTB/PI_dom,smart_Rab-GTPase-TBC_dom,pfscan_PTB/PI_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	RABGAP1	HGNC	ENSG00000011454				60	0	0.00	73	4	5.19
RETSAT	0	genome.wustl.edu	37	2	85577118	85577118	+	RNA	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	2	85577118	85577118	C	T	SNP	RETSAT	ENST00000482694	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	RETSAT	HGNC	ENSG00000042445	tier1	-	-	26	0	0.00	17	4	19.05
RHBDD2	0	genome.wustl.edu	37	7	75511280	75511280	+	Silent	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	7	75511280	75511280	G	T	SNP	RHBDD2	ENST00000006777	human	ensembl	74_37	+1	known	silent	c.312	p.V104	0.012	pfam_Peptidase_S54_rhomboid_dom	pfam_Peptidase_S54_rhomboid_dom	-	no_errors	RHBDD2	HGNC	ENSG00000005486				90	0	0.00	72	5	6.49
RHEBL1	0	genome.wustl.edu	37	12	49459167	49459167	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	12	49459167	49459167	G	A	SNP	RHEBL1	ENST00000301068	human	ensembl	74_37	-1	known	missense	c.428	p.A143V	0.929	pfam_Small_GTPase,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RHEBL1	HGNC	ENSG00000167550	tier1	rs201496596	-	105	0	0.00	24	23	48.94
RIBC2	0	genome.wustl.edu	37	22	45826894	45826894	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	22	45826894	45826894	C	T	SNP	RIBC2	ENST00000538017	human	ensembl	74_37	+1	known	missense	c.1003	p.R335C	0.322	pfam_RIB43A	pfam_RIB43A	-	no_errors	RIBC2	HGNC	ENSG00000128408	tier1	-	-	29	0	0.00	13	14	51.85
RIMS1	0	genome.wustl.edu	37	6	73110998	73110999	+	RNA	INS	-	-	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	6	73110998	73110999	-	A	INS	RIMS1	ENST00000431478	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.974:0.049	-	-	-	no_errors	RIMS1	HGNC	ENSG00000079841	tier1			44	0	0.00	33	12	26.67
RNF10	0	genome.wustl.edu	37	12	121001268	121001268	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	12	121001268	121001268	C	A	SNP	RNF10	ENST00000413266	human	ensembl	74_37	+1	known	missense	c.1388	p.P463Q	0.055	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF10	HGNC	ENSG00000022840				28	0	0.00	30	2	6.25
RNF180	0	genome.wustl.edu	37	5	63626151	63626151	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	5	63626151	63626151	G	T	SNP	RNF180	ENST00000389100	human	ensembl	74_37	+1	known	missense	c.1497	p.L499F	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF180	HGNC	ENSG00000164197	tier1	-	-	63	0	0.00	46	5	9.62
RP2	0	genome.wustl.edu	37	X	46713483	46713483	+	Silent	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	X	46713483	46713483	G	T	SNP	RP2	ENST00000218340	human	ensembl	74_37	+1	known	silent	c.675	p.R225	0.970	pirsf_Protein_XRP2	pfam_Tubulin-bd_cofactor_C_dom,superfamily_Nucleoside_diP_kinase,superfamily_Adenylate_cyclase-assoc_CAP_C,smart_CARP_motif,pirsf_Protein_XRP2	-	no_errors	RP2	HGNC	ENSG00000102218	tier1	-	-	32	0	0.00	6	3	33.33
RPL8	0	genome.wustl.edu	37	8	146017167	146017167	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	8	146017167	146017167	C	T	SNP	RPL8	ENST00000262584	human	ensembl	74_37	-1	known	missense	c.271	p.G91S	1.000	superfamily_NA-bd_OB-fold,pirsf_Ribosomal_L2	pfam_Ribosomal_L2_C,pfam_Rbsml_prot_L2_RNA-bd_dom,superfamily_Translation_prot_SH3-like,superfamily_NA-bd_OB-fold,pirsf_Ribosomal_L2	-	no_errors	RPL8	HGNC	ENSG00000161016				75	0	0.00	67	4	5.63
RPRM	0	genome.wustl.edu	37	2	154334954	154334954	+	Silent	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	2	154334954	154334954	C	T	SNP	RPRM	ENST00000325926	human	ensembl	74_37	-1	known	silent	c.126	p.A42	1.000	NULL	NULL	-	no_errors	RPRM	HGNC	ENSG00000177519	tier1	-	-	30	0	0.00	12	5	29.41
RRBP1	0	genome.wustl.edu	37	20	17599256	17599256	+	Silent	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	20	17599256	17599256	G	A	SNP	RRBP1	ENST00000246043	human	ensembl	74_37	-1	known	silent	c.3744	p.S1248	0.052	NULL	pfam_Rib_rcpt_KP,superfamily_Ribosome_recyc_fac_dom	-	no_errors	RRBP1	HGNC	ENSG00000125844	tier1	-	-	48	0	0.00	37	6	13.95
RTP2	0	genome.wustl.edu	37	3	187416574	187416574	+	Silent	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	3	187416574	187416574	G	A	SNP	RTP2	ENST00000358241	human	ensembl	74_37	-1	known	silent	c.390	p.Y130	0.974	NULL	NULL	-	no_errors	RTP2	HGNC	ENSG00000198471	tier1	-	-	38	0	0.00	16	6	27.27
S100A11	0	genome.wustl.edu	37	1	152005287	152005287	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	1	152005287	152005287	G	T	SNP	S100A11	ENST00000271638	human	ensembl	74_37	-1	known	missense	c.169	p.P57T	0.999	pfscan_EF_hand_dom	pfam_S100_Ca-bd_sub,pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	S100A11	HGNC	ENSG00000163191				50	0	0.00	47	3	6.00
SALL1	0	genome.wustl.edu	37	16	51175536	51175536	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	16	51175536	51175536	G	T	SNP	SALL1	ENST00000251020	human	ensembl	74_37	-1	known	missense	c.597	p.N199K	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL1	HGNC	ENSG00000103449	tier1	-	-	85	0	0.00	37	4	9.76
SDK1	0	genome.wustl.edu	37	7	4218194	4218194	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	7	4218194	4218194	G	A	SNP	SDK1	ENST00000404826	human	ensembl	74_37	+1	known	missense	c.5074	p.V1692M	0.986	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	SDK1	HGNC	ENSG00000146555	tier1	-	-	53	0	0.00	35	15	30.00
SEMA5B	0	genome.wustl.edu	37	3	122631054	122631054	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	3	122631054	122631054	G	A	SNP	SEMA5B	ENST00000451055	human	ensembl	74_37	-1	known	missense	c.3023	p.T1008M	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Semap_dom,pfam_Thrombospondin_1_rpt,superfamily_Semap_dom,superfamily_Thrombospondin_1_rpt,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Thrombospondin_1_rpt,pfscan_Semap_dom,pfscan_Thrombospondin_1_rpt	-	no_errors	SEMA5B	HGNC	ENSG00000082684	tier1	-	-	29	0	0.00	10	4	28.57
SFXN4	0	genome.wustl.edu	37	10	120900751	120900751	+	RNA	SNP	C	C	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	10	120900751	120900751	C	A	SNP	SFXN4	ENST00000484960	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SFXN4	HGNC	ENSG00000183605	tier1	-	-	111	0	0.00	33	35	51.47
SH2D5	0	genome.wustl.edu	37	1	21049287	21049287	+	Nonsense_Mutation	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	1	21049287	21049287	G	A	SNP	SH2D5	ENST00000444387	human	ensembl	74_37	-1	known	nonsense	c.1030	p.Q344*	1.000	pfscan_SH2	pfam_PTB/PI_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom,pfscan_SH2	-	no_errors	SH2D5	HGNC	ENSG00000189410	tier1	-	-	129	0	0.00	46	27	36.99
SHROOM3	0	genome.wustl.edu	37	4	77476876	77476876	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	4	77476876	77476876	G	T	SNP	SHROOM3	ENST00000296043	human	ensembl	74_37	+1	known	missense	c.283	p.V95L	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_ASD2,pfam_ASD1,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SHROOM3	HGNC	ENSG00000138771	tier1	-	-	87	0	0.00	34	4	10.53
SLC17A6	0	genome.wustl.edu	37	11	22396359	22396359	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	11	22396359	22396359	G	A	SNP	SLC17A6	ENST00000263160	human	ensembl	74_37	+1	known	missense	c.1100	p.G367E	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC17A6	HGNC	ENSG00000091664	tier1	-	-	73	0	0.00	52	4	7.14
SLC22A2	0	genome.wustl.edu	37	6	160664750	160664750	+	Missense_Mutation	SNP	A	A	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	6	160664750	160664750	A	T	SNP	SLC22A2	ENST00000366953	human	ensembl	74_37	-1	known	missense	c.1133	p.L378Q	0.992	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	-	no_errors	SLC22A2	HGNC	ENSG00000112499	tier1	-	-	65	0	0.00	19	30	61.22
SLC30A2	0	genome.wustl.edu	37	1	26365728	26365728	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	1	26365728	26365728	G	T	SNP	SLC30A2	ENST00000374276	human	ensembl	74_37	-1	known	missense	c.1042	p.H348N	1.000	pfam_Cation_efflux,tigrfam_Cation_efflux	pfam_Cation_efflux,tigrfam_Cation_efflux	-	no_errors	SLC30A2	HGNC	ENSG00000158014				50	0	0.00	29	2	6.45
SLC35A2	0	genome.wustl.edu	37	X	48760684	48760684	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	X	48760684	48760684	G	T	SNP	SLC35A2	ENST00000376529	human	ensembl	74_37	-1	known	nonsense	c.632	p.S211*	0.030	NULL	pfam_Nuc_sug_transpt	-	no_errors	SLC35A2	HGNC	ENSG00000102100	tier1	-	-	52	0	0.00	20	4	16.67
SLC39A8	0	genome.wustl.edu	37	4	103228745	103228745	+	Silent	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	4	103228745	103228745	G	A	SNP	SLC39A8	ENST00000356736	human	ensembl	74_37	-1	known	silent	c.400	p.L134	1.000	pfam_ZIP	pfam_ZIP	-	no_errors	SLC39A8	HGNC	ENSG00000138821	tier1	-	-	54	0	0.00	17	18	51.43
SLC5A12	0	genome.wustl.edu	37	11	26743173	26743173	+	Missense_Mutation	SNP	A	A	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	11	26743173	26743173	A	T	SNP	SLC5A12	ENST00000396005	human	ensembl	74_37	-1	known	missense	c.89	p.I30N	0.924	pfscan_Na/solute_symporter	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A12	HGNC	ENSG00000148942	tier1	-	-	89	0	0.00	29	17	36.96
SLC7A13	0	genome.wustl.edu	37	8	87235208	87235208	+	Silent	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	8	87235208	87235208	G	A	SNP	SLC7A13	ENST00000297524	human	ensembl	74_37	-1	known	silent	c.810	p.L270	0.170	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	-	no_errors	SLC7A13	HGNC	ENSG00000164893	tier1	-	-	69	0	0.00	64	18	21.95
SLCO6A1	0	genome.wustl.edu	37	5	101834432	101834432	+	Silent	SNP	C	C	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	5	101834432	101834432	C	A	SNP	SLCO6A1	ENST00000379807	human	ensembl	74_37	-1	known	silent	c.117	p.P39	0.000	NULL	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,tigrfam_OA_transporter	-	no_errors	SLCO6A1	HGNC	ENSG00000205359	tier1	-	-	66	0	0.00	28	12	30.00
SMAD4	0	genome.wustl.edu	37	18	48591918	48591918	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	18	48591918	48591918	C	T	SNP	SMAD4	ENST00000342988	human	ensembl	74_37	+1	known	missense	c.1081	p.R361C	1.000	pfam_SMAD_dom_Dwarfin-type,superfamily_SMAD_FHA_domain,smart_SMAD_dom_Dwarfin-type,pfscan_SMAD_dom_Dwarfin-type	pfam_SMAD_dom_Dwarfin-type,pfam_MAD_homology1_Dwarfin-type,superfamily_SMAD_FHA_domain,superfamily_MAD_homology_MH1,smart_MAD_homology1_Dwarfin-type,smart_SMAD_dom_Dwarfin-type,pfscan_MAD_homology_MH1,pfscan_SMAD_dom_Dwarfin-type	-	no_errors	SMAD4	HGNC	ENSG00000141646	tier1	rs80338963	-	121	0	0.00	19	32	61.54
SMARCA1	0	genome.wustl.edu	37	X	128645853	128645853	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	X	128645853	128645853	G	T	SNP	SMARCA1	ENST00000371122	human	ensembl	74_37	-1	known	missense	c.738	p.N246K	1.000	pfam_SNF2_N,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_SNF2_N,pfam_SLIDE,pfam_ISWI_HAND-dom,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Homeodomain-like,superfamily_ISWI_HAND-dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_SANT/Myb,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SMARCA1	HGNC	ENSG00000102038				92	0	0.00	57	3	5.00
SMCR8	0	genome.wustl.edu	37	17	18219589	18219589	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	17	18219589	18219589	G	T	SNP	SMCR8	ENST00000406438	human	ensembl	74_37	+1	known	missense	c.486	p.Q162H	1.000	pfam_Folliculin	pfam_Folliculin	-	no_errors	SMCR8	HGNC	ENSG00000176994	tier1	-	-	71	0	0.00	62	4	6.06
SMOC2	0	genome.wustl.edu	37	6	168999587	168999587	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	6	168999587	168999587	G	A	SNP	SMOC2	ENST00000354536	human	ensembl	74_37	+1	known	missense	c.760	p.G254S	0.980	pfam_Thyroglobulin_1,superfamily_Thyroglobulin_1,smart_Thyroglobulin_1,pfscan_Thyroglobulin_1	pfam_Thyroglobulin_1,pfam_SPARC/Testican_Ca-bd-dom,pfam_Kazal_dom,superfamily_Thyroglobulin_1,smart_Kazal_dom,smart_Thyroglobulin_1,pfscan_EF_hand_dom,pfscan_Thyroglobulin_1	-	no_errors	SMOC2	HGNC	ENSG00000112562	tier1	-	-	52	0	0.00	28	7	20.00
SOWAHC	0	genome.wustl.edu	37	2	110372640	110372640	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	2	110372640	110372640	C	T	SNP	SOWAHC	ENST00000356454	human	ensembl	74_37	+1	known	missense	c.574	p.L192F	0.005	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	SOWAHC	HGNC	ENSG00000198142	tier1	-	-	15	0	0.00	2	8	80.00
SPPL2C	0	genome.wustl.edu	37	17	43922723	43922723	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	17	43922723	43922723	G	T	SNP	SPPL2C	ENST00000329196	human	ensembl	74_37	+1	known	missense	c.451	p.A151S	1.000	pfam_Protease-assoc_domain	pfam_Peptidase_A22B_SPP,pfam_Protease-assoc_domain,smart_Preselin/SPP	-	no_errors	SPPL2C	HGNC	ENSG00000185294				78	0	0.00	44	3	6.38
SPRTN	0	genome.wustl.edu	37	1	231488755	231488755	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	1	231488755	231488755	C	T	SNP	SPRTN	ENST00000295050	human	ensembl	74_37	+1	known	missense	c.1118	p.S373L	0.009	NULL	pfam_SprT-like_domain,smart_SprT-like_domain,smart_Znf_Rad18_put	-	no_errors	SPRTN	HGNC	ENSG00000010072	tier1	-	-	47	0	0.00	15	12	44.44
SRRM4	0	genome.wustl.edu	37	12	119588991	119588991	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	12	119588991	119588991	T	G	SNP	SRRM4	ENST00000267260	human	ensembl	74_37	+1	known	missense	c.1246	p.Y416D	1.000	NULL	NULL	-	no_errors	SRRM4	HGNC	ENSG00000139767	tier1	-	-	46	0	0.00	24	13	35.14
STAMBPL1	0	genome.wustl.edu	37	10	90672881	90672882	+	Frame_Shift_Ins	INS	-	-	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	10	90672881	90672882	-	A	INS	STAMBPL1	ENST00000371927	human	ensembl	74_37	+1	known	frame_shift_ins	c.444_445	p.L150fs	1.000:1.000	NULL	pfam_JAB_MPN_dom,smart_JAB_MPN_dom	-	no_errors	STAMBPL1	HGNC	ENSG00000138134	tier1			66	0	0.00	33	2	5.71
SUCLG2	0	genome.wustl.edu	37	3	67426275	67426275	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	3	67426275	67426275	C	T	SNP	SUCLG2	ENST00000307227	human	ensembl	74_37	-1	known	missense	c.1192	p.V398I	1.000	pfam_CoA_ligase,superfamily_Succinyl-CoA_synth-like,tigrfam_Succ_CoA_synthase_bsu	pfam_ATP-grasp_succ-CoA_synth-type,pfam_CoA_ligase,superfamily_Succinyl-CoA_synth-like,tigrfam_Succ_CoA_synthase_bsu	-	no_errors	SUCLG2	HGNC	ENSG00000172340	tier1	-	-	93	0	0.00	53	27	33.75
SYNE1	0	genome.wustl.edu	37	6	152712457	152712457	+	Silent	SNP	A	A	C			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	6	152712457	152712457	A	C	SNP	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	silent	c.7959	p.T2653	0.000	superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018	tier1	-	-	65	0	0.00	53	6	10.17
SYNE2	0	genome.wustl.edu	37	14	64608788	64608790	+	In_Frame_Del	DEL	TCT	TCT	-			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	TCT	TCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	14	64608788	64608790	TCT	-	DEL	SYNE2	ENST00000358025	human	ensembl	74_37	+1	known	in_frame_del	c.15288_15290	p.L5098in_frame_del	0.000:0.995:1.000	smart_Spectrin/alpha-actinin	pfam_CH-domain,pfam_KASH,pfam_Spectrin_repeat,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE2	HGNC	ENSG00000054654	tier1			57	0	0.00	33	3	8.33
SYT11	0	genome.wustl.edu	37	1	155837837	155837837	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	1	155837837	155837837	G	A	SNP	SYT11	ENST00000368324	human	ensembl	74_37	+1	known	missense	c.116	p.C39Y	1.000	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_Synaptotagmin	-	no_errors	SYT11	HGNC	ENSG00000132718	tier1	-	-	42	0	0.00	32	4	11.11
TBC1D27	0	genome.wustl.edu	37	17	16826941	16826944	+	RNA	DEL	GCTG	GCTG	-			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	GCTG	GCTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	17	16826941	16826944	GCTG	-	DEL	TBC1D27	ENST00000261651	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.942:0.941:0.934:0.905	-	-	-	no_errors	TBC1D27	HGNC	ENSG00000128438	tier1			8	0	0.00	6	2	25.00
TEKT5	0	genome.wustl.edu	37	16	10788356	10788356	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	16	10788356	10788356	G	T	SNP	TEKT5	ENST00000283025	human	ensembl	74_37	-1	known	missense	c.375	p.D125E	1.000	pfam_Tektin	pfam_Tektin,prints_Tektin	-	no_errors	TEKT5	HGNC	ENSG00000153060	tier1	-	-	53	0	0.00	34	4	10.53
TENM4	0	genome.wustl.edu	37	11	78387280	78387280	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	11	78387280	78387280	C	T	SNP	TENM4	ENST00000278550	human	ensembl	74_37	-1	known	missense	c.5413	p.D1805N	1.000	NULL	pfam_Ten_N,pfam_EGF_extracell,pfam_YD,superfamily_CarboxyPept-like_regulatory,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM4	HGNC	ENSG00000149256	tier1	-	-	158	0	0.00	56	49	46.67
TFAP2C	0	genome.wustl.edu	37	20	55212825	55212825	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	20	55212825	55212825	G	A	SNP	TFAP2C	ENST00000201031	human	ensembl	74_37	+1	known	missense	c.1109	p.R370Q	0.992	pfam_TF_AP2_C	pfam_TF_AP2_C,prints_TF_AP2_C,prints_TF_AP2_gamma	-	no_errors	TFAP2C	HGNC	ENSG00000087510	tier1	rs138750457	-	45	0	0.00	22	27	55.10
TFAP2D	0	genome.wustl.edu	37	6	50696969	50696969	+	Nonsense_Mutation	SNP	T	T	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	6	50696969	50696969	T	A	SNP	TFAP2D	ENST00000008391	human	ensembl	74_37	+1	known	nonsense	c.827	p.L276*	1.000	pfam_TF_AP2_C,prints_TF_AP2_C	pfam_TF_AP2_C,prints_TF_AP2_C	-	no_errors	TFAP2D	HGNC	ENSG00000008197	tier1	-	-	61	0	0.00	8	25	75.76
TFR2	0	genome.wustl.edu	37	7	100238328	100238328	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	7	100238328	100238328	G	A	SNP	TFR2	ENST00000223051	human	ensembl	74_37	-1	known	missense	c.454	p.R152C	0.001	NULL	pfam_TFR-like_dimer_dom,pfam_Peptidase_M28,pfam_Protease-assoc_domain,superfamily_TFR-like_dimer_dom	-	no_errors	TFR2	HGNC	ENSG00000106327				45	0	0.00	41	3	6.82
TGFB2	0	genome.wustl.edu	37	1	218607750	218607750	+	Silent	SNP	C	C	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	1	218607750	218607750	C	A	SNP	TGFB2	ENST00000366929	human	ensembl	74_37	+1	known	silent	c.798	p.I266	1.000	pirsf_TGF-beta,prints_TGFb2	pirsf_TGF-beta,pfam_TGF-b_N,pfam_TGF-b_C,smart_TGF-b_C,prints_TGFb2,prints_TGF-beta	-	no_errors	TGFB2	HGNC	ENSG00000092969				77	0	0.00	57	3	5.00
TLR2	0	genome.wustl.edu	37	4	154625406	154625406	+	Silent	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	4	154625406	154625406	C	T	SNP	TLR2	ENST00000260010	human	ensembl	74_37	+1	known	silent	c.1347	p.H449	0.000	pirsf_Toll-like_receptor	pirsf_Toll-like_receptor,pfam_TIR_dom,pfam_Leu-rich_rpt,superfamily_TIR_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_TIR_dom,pfscan_TIR_dom	-	no_errors	TLR2	HGNC	ENSG00000137462	tier1	-	-	46	0	0.00	23	3	11.54
TMEM248	0	genome.wustl.edu	37	7	66415976	66415976	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	7	66415976	66415976	G	T	SNP	TMEM248	ENST00000341567	human	ensembl	74_37	+1	known	missense	c.634	p.A212S	1.000	NULL	NULL	-	no_errors	TMEM248	HGNC	ENSG00000106609				76	0	0.00	52	3	5.45
TMEM42	0	genome.wustl.edu	37	3	44905743	44905743	+	Silent	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	3	44905743	44905743	C	T	SNP	TMEM42	ENST00000302392	human	ensembl	74_37	+1	known	silent	c.247	p.L83	0.963	NULL	NULL	-	no_errors	TMEM42	HGNC	ENSG00000169964	tier1	-	-	90	0	0.00	61	30	32.97
TP53	0	genome.wustl.edu	37	17	7577538	7577538	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	17	7577538	7577538	C	T	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.743	p.R248Q	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	rs11540652	-	65	0	0.00	11	44	80.00
TP53INP2	0	genome.wustl.edu	37	20	33297285	33297285	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	20	33297285	33297285	C	A	SNP	TP53INP2	ENST00000374809	human	ensembl	74_37	+1	known	missense	c.370	p.P124T	0.698	NULL	NULL	-	no_errors	TP53INP2	HGNC	ENSG00000078804				98	0	0.00	92	5	5.15
TRAF3IP2-AS1	0	genome.wustl.edu	37	6	111922218	111922218	+	RNA	SNP	T	T	C			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	6	111922218	111922218	T	C	SNP	TRAF3IP2-AS1	ENST00000531702	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	C6orf3	Clone_based_vega_gene	ENSG00000255389	tier1	-	-	12	0	0.00	1	7	87.50
TRAIP	0	genome.wustl.edu	37	3	49881278	49881278	+	Nonsense_Mutation	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	3	49881278	49881278	G	A	SNP	TRAIP	ENST00000331456	human	ensembl	74_37	-1	known	nonsense	c.364	p.Q122*	1.000	superfamily_Prefoldin	pfam_Znf_C3HC4_RING-type,superfamily_Prefoldin,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	TRAIP	HGNC	ENSG00000183763	tier1	-	-	55	0	0.00	27	19	41.30
TRIM64C	0	genome.wustl.edu	37	11	49077928	49077928	+	Silent	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	11	49077928	49077928	C	T	SNP	TRIM64C	ENST00000530230	human	ensembl	74_37	-1	known	silent	c.735	p.V245	0.000	NULL	pfam_SPRY_rcpt,pfam_Znf_B-box,superfamily_ConA-like_lec_gl_sf,smart_Znf_B-box,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM64C	HGNC	ENSG00000214891	tier1	-	-	236	0	0.00	163	56	25.57
TTC8	0	genome.wustl.edu	37	14	89305916	89305916	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	14	89305916	89305916	C	T	SNP	TTC8	ENST00000338104	human	ensembl	74_37	+1	known	missense	c.235	p.R79C	1.000	NULL	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC8	HGNC	ENSG00000165533	tier1	-	-	55	0	0.00	66	4	5.71
UNC13A	0	genome.wustl.edu	37	19	17758177	17758177	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	19	17758177	17758177	C	A	SNP	UNC13A	ENST00000428389	human	ensembl	74_37	-1	known	missense	c.2205	p.E735D	1.000	NULL	pfam_Munc13_subgr_dom-2,pfam_C2_dom,pfam_Ca-dep_secretion_activator,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_C2_dom,smart_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_C2_dom	-	no_errors	UNC13A	HGNC	ENSG00000130477				30	0	0.00	30	2	6.25
USP40	0	genome.wustl.edu	37	2	234438130	234438130	+	Silent	SNP	T	T	C			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	2	234438130	234438130	T	C	SNP	USP40	ENST00000450966	human	ensembl	74_37	-1	known	silent	c.1533	p.P511	0.000	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP40	HGNC	ENSG00000085982	tier1	-	-	102	0	0.00	44	28	38.89
VGLL2	0	genome.wustl.edu	37	6	117591852	117591852	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	6	117591852	117591852	G	A	SNP	VGLL2	ENST00000326274	human	ensembl	74_37	+1	known	missense	c.538	p.A180T	0.989	NULL	pfam_Vg_Tdu	-	no_errors	VGLL2	HGNC	ENSG00000170162	tier1	-	-	12	0	0.00	6	4	40.00
WASH3P	0	genome.wustl.edu	37	15	102506929	102506930	+	RNA	INS	-	-	TATAG			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	15	102506929	102506930	0	TATAG	INS	WASH3P	ENST00000559884	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	WASH3P	HGNC	ENSG00000185596				8	0	0.00	5	3	37.50
WWC2-AS2	0	genome.wustl.edu	37	4	184019123	184019123	+	RNA	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	4	184019123	184019123	C	T	SNP	WWC2-AS2	ENST00000506413	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	WWC2-AS2	HGNC	ENSG00000251359	tier1	-	-	31	0	0.00	6	12	66.67
ZAK	0	genome.wustl.edu	37	2	174074531	174074531	+	Silent	SNP	T	T	C			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	2	174074531	174074531	T	C	SNP	ZAK	ENST00000375213	human	ensembl	74_37	+1	known	silent	c.819	p.C273	1.000	pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SAM_type1,pfam_SAM_2,superfamily_Kinase-like_dom,superfamily_SAM/pointed,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MLTK	Uniprot_gn	ENSG00000091436				34	0	0.00	32	3	8.57
ZBED1	0	genome.wustl.edu	37	X	2408326	2408326	+	Silent	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	X	2408326	2408326	G	A	SNP	ZBED1	ENST00000381218	human	ensembl	74_37	-1	known	silent	c.435	p.D145	0.989	NULL	pfam_HATC_dom_C,pfam_Znf_BED_prd,superfamily_RNaseH-like_dom,smart_Znf_BED_prd,pfscan_Znf_BED_prd	-	no_errors	ZBED1	HGNC	ENSG00000214717	tier1	-	-	79	0	0.00	29	52	64.20
ZDHHC5	0	genome.wustl.edu	37	11	57449967	57449967	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	11	57449967	57449967	G	A	SNP	ZDHHC5	ENST00000287169	human	ensembl	74_37	+1	known	missense	c.178	p.A60T	1.000	NULL	pfam_Znf_DHHC_palmitoyltrfase,superfamily_Plexin-like_fold,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC5	HGNC	ENSG00000156599				105	0	0.00	45	3	6.25
ZFAND4	0	genome.wustl.edu	37	10	46111990	46111990	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	10	46111990	46111990	C	T	SNP	ZFAND4	ENST00000344646	human	ensembl	74_37	-1	known	missense	c.2078	p.R693H	1.000	pfam_Znf_AN1,smart_Znf_AN1,pfscan_Znf_AN1	pfam_Ubiquitin_dom,pfam_Znf_AN1,smart_Ubiquitin_dom,smart_Znf_AN1,pfscan_Znf_AN1,pfscan_Ubiquitin_supergroup,prints_Ubiquitin	-	no_errors	ZFAND4	HGNC	ENSG00000172671	tier1	-	-	88	0	0.00	39	13	25.00
ZFHX4	0	genome.wustl.edu	37	8	77620259	77620259	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	8	77620259	77620259	C	A	SNP	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	missense	c.3069	p.H1023Q	0.983	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656	tier1	-	-	39	0	0.00	12	24	66.67
ZNF169	0	genome.wustl.edu	37	9	97062288	97062288	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	9	97062288	97062288	G	T	SNP	ZNF169	ENST00000395395	human	ensembl	74_37	+1	known	missense	c.448	p.D150Y	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF169	HGNC	ENSG00000175787				48	0	0.00	42	3	6.67
ZNF208	0	genome.wustl.edu	37	19	22156812	22156812	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	19	22156812	22156812	T	G	SNP	ZNF208	ENST00000397126	human	ensembl	74_37	-1	novel	missense	c.1024	p.K342Q	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF208	HGNC	ENSG00000160321	tier1	-	-	107	0	0.00	53	55	50.46
ZNF23	0	genome.wustl.edu	37	16	71482560	71482560	+	Silent	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	16	71482560	71482560	G	A	SNP	ZNF23	ENST00000357254	human	ensembl	74_37	-1	known	silent	c.1368	p.A456	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF23	HGNC	ENSG00000167377	tier1	-	-	119	0	0.00	12	30	71.43
ZNF234	0	genome.wustl.edu	37	19	44662023	44662023	+	Silent	SNP	C	C	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	19	44662023	44662023	C	T	SNP	ZNF234	ENST00000426739	human	ensembl	74_37	+1	known	silent	c.1854	p.H618	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF234	HGNC	ENSG00000263002	tier1	-	-	94	0	0.00	37	24	39.34
ZNF415	0	genome.wustl.edu	37	19	53625748	53625748	+	RNA	SNP	G	G	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	19	53625748	53625748	G	A	SNP	ZNF415	ENST00000594286	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	ZNF415	HGNC	ENSG00000170954	tier1	-	-	31	0	0.00	25	11	30.56
ZNF521	0	genome.wustl.edu	37	18	22806976	22806976	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	18	22806976	22806976	C	A	SNP	ZNF521	ENST00000361524	human	ensembl	74_37	-1	known	missense	c.906	p.Q302H	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF521	HGNC	ENSG00000198795	tier1	-	-	67	0	0.00	13	19	59.38
ZNF676	0	genome.wustl.edu	37	19	22364151	22364151	+	Missense_Mutation	SNP	T	T	A			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	19	22364151	22364151	T	A	SNP	ZNF676	ENST00000397121	human	ensembl	74_37	-1	known	missense	c.368	p.H123L	0.007	NULL	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF676	HGNC	ENSG00000196109	tier1	-	-	156	0	0.00	227	22	8.84
ZP4	0	genome.wustl.edu	37	1	238051808	238051808	+	Silent	SNP	G	G	T			TCGA-JY-A93C-01A-11D-A387-09	TCGA-JY-A93C-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e330a3a7-6be8-48b5-bb3c-1e4d1b75a6a6	4966dbe0-8508-4888-8d41-4909e3a71c98	1	238051808	238051808	G	T	SNP	ZP4	ENST00000366570	human	ensembl	74_37	-1	known	silent	c.403	p.R135	0.004	NULL	pfam_ZP_dom,pfam_P_trefoil,superfamily_P_trefoil,smart_P_trefoil,smart_ZP_dom,pfscan_ZP_dom,prints_ZP_dom	-	no_errors	ZP4	HGNC	ENSG00000116996	tier1	-	-	71	0	0.00	47	4	7.84
